Metagenome / Metatranscriptome Family F054751

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F054751
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	39 residues
Representative Sequence	MPEVSSTGHEAETEALTSDELLVEEVSIDGMCGVY
Number of Associated Samples	118
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.55 %
% of genes near scaffold ends (potentially truncated)	33.09 %
% of genes from short scaffolds (< 2000 bps)	85.61 %
Associated GOLD sequencing projects	112
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.16

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (83.453 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (21.583 % of family members)
Environment Ontology (ENVO)	Unclassified (28.777 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.043 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.11% β-sheet: 0.00% Coil/Unstructured: 88.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.16
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.16
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF00440	TetR_N	34.53
PF04055	Radical_SAM	26.62
PF13186	SPASM	2.16
PF00535	Glycos_transf_2	0.72
PF02633	Creatininase	0.72
PF00152	tRNA-synt_2	0.72
PF00309	Sigma54_AID	0.72
PF13188	PAS_8	0.72
PF02566	OsmC	0.72
PF01494	FAD_binding_3	0.72
PF02773	S-AdoMet_synt_C	0.72
PF02219	MTHFR	0.72
PF00903	Glyoxalase	0.72
PF00561	Abhydrolase_1	0.72
PF00717	Peptidase_S24	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.44
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.72
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.72
COG0192	S-adenosylmethionine synthetase	Coenzyme transport and metabolism [H]	0.72
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.72
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.72
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.72
COG0685	5,10-methylenetetrahydrofolate reductase	Amino acid transport and metabolism [E]	0.72
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.72
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	0.72
COG1508	DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog	Transcription [K]	0.72
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.72
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.72
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	83.45 %
Unclassified	root	N/A	16.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	83.45 %
Unclassified	root	N/A	16.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	83.45 %
Unclassified	root	N/A	16.55 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	82.01 %
Unclassified	root	N/A	16.55 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	82.01 %
Unclassified	root	N/A	16.55 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.53 %
Unclassified	root	N/A	16.55 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.55 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	2.88 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2.16 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.44 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.55 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	2.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.44 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.72 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.44 %
Frondihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Frondihabitans	0.72 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.72 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.44 %
Nocardiopsis gilva	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis gilva	0.72 %
unclassified Frondihabitans	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Frondihabitans → unclassified Frondihabitans	0.72 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	16.55 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.44 %
Frondihabitans sp. PAMC 28766	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Frondihabitans → unclassified Frondihabitans → Frondihabitans sp. PAMC 28766	0.72 %
Nocardiopsis gilva	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis gilva	0.72 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10285915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	810	Open in IMG/M
3300001867\|JGI12627J18819_10259657	Not Available	699	Open in IMG/M
3300002245\|JGIcombinedJ26739_100244253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1684	Open in IMG/M
3300002245\|JGIcombinedJ26739_100848533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	795	Open in IMG/M
3300003505\|JGIcombinedJ51221_10146868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	951	Open in IMG/M
3300004799\|Ga0058863_11918177	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	659	Open in IMG/M
3300004800\|Ga0058861_10022342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	591	Open in IMG/M
3300005327\|Ga0070658_10099749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2399	Open in IMG/M
3300005458\|Ga0070681_11671573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	563	Open in IMG/M
3300005542\|Ga0070732_10586527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis → Nocardiopsis gilva	677	Open in IMG/M
3300005548\|Ga0070665_101127890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	796	Open in IMG/M
3300005577\|Ga0068857_100281801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1529	Open in IMG/M
3300005610\|Ga0070763_10123390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1330	Open in IMG/M
3300005610\|Ga0070763_10526488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	679	Open in IMG/M
3300005614\|Ga0068856_100773591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	980	Open in IMG/M
3300005921\|Ga0070766_10915718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	601	Open in IMG/M
3300006755\|Ga0079222_12431503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	525	Open in IMG/M
3300006804\|Ga0079221_10274249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	973	Open in IMG/M
3300007982\|Ga0102924_1048550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2515	Open in IMG/M
3300007982\|Ga0102924_1067142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1973	Open in IMG/M
3300009093\|Ga0105240_12121814	Not Available	583	Open in IMG/M
3300009792\|Ga0126374_11022764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	650	Open in IMG/M
3300009826\|Ga0123355_11072194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	843	Open in IMG/M
3300009826\|Ga0123355_11900261	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	557	Open in IMG/M
3300010049\|Ga0123356_10284021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1752	Open in IMG/M
3300010143\|Ga0126322_1049915	Not Available	555	Open in IMG/M
3300010162\|Ga0131853_10614145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	931	Open in IMG/M
3300010358\|Ga0126370_11973402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	570	Open in IMG/M
3300010373\|Ga0134128_11842984	Not Available	666	Open in IMG/M
3300010376\|Ga0126381_102747532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703	Open in IMG/M
3300010396\|Ga0134126_10516653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1374	Open in IMG/M
3300010866\|Ga0126344_1222070	Not Available	677	Open in IMG/M
3300010876\|Ga0126361_11175747	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	882	Open in IMG/M
3300011120\|Ga0150983_10325438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	735	Open in IMG/M
3300011120\|Ga0150983_14558763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	644	Open in IMG/M
3300011271\|Ga0137393_10240108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1536	Open in IMG/M
3300012202\|Ga0137363_10539339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	982	Open in IMG/M
3300012359\|Ga0137385_11059286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	668	Open in IMG/M
3300012924\|Ga0137413_10282734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1152	Open in IMG/M
3300012957\|Ga0164303_11330083	Not Available	533	Open in IMG/M
3300014168\|Ga0181534_10484130	Not Available	697	Open in IMG/M
3300014169\|Ga0181531_10043844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2603	Open in IMG/M
3300014968\|Ga0157379_10605196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1023	Open in IMG/M
3300017937\|Ga0187809_10053904	All Organisms → cellular organisms → Bacteria	1301	Open in IMG/M
3300019268\|Ga0181514_1446638	Not Available	577	Open in IMG/M
3300020069\|Ga0197907_10787512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1975	Open in IMG/M
3300020070\|Ga0206356_10030268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1218	Open in IMG/M
3300020070\|Ga0206356_10812605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1366	Open in IMG/M
3300020075\|Ga0206349_1669227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	543	Open in IMG/M
3300020075\|Ga0206349_1845491	Not Available	534	Open in IMG/M
3300020076\|Ga0206355_1113179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300020077\|Ga0206351_10671832	Not Available	1920	Open in IMG/M
3300020078\|Ga0206352_10075029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1128	Open in IMG/M
3300020078\|Ga0206352_10202628	Not Available	538	Open in IMG/M
3300020080\|Ga0206350_11335457	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	815	Open in IMG/M
3300020081\|Ga0206354_11559547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1064	Open in IMG/M
3300020082\|Ga0206353_10531470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	1470	Open in IMG/M
3300020199\|Ga0179592_10212625	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300020580\|Ga0210403_10323684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1263	Open in IMG/M
3300020582\|Ga0210395_10657658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	785	Open in IMG/M
3300020583\|Ga0210401_10052110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3862	Open in IMG/M
3300020610\|Ga0154015_1019780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Frondihabitans → unclassified Frondihabitans → Frondihabitans sp. PAMC 28766	718	Open in IMG/M
3300021151\|Ga0179584_1280033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300021171\|Ga0210405_11190933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	565	Open in IMG/M
3300021178\|Ga0210408_10145202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1878	Open in IMG/M
3300021180\|Ga0210396_10451682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1127	Open in IMG/M
3300021401\|Ga0210393_10638798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	869	Open in IMG/M
3300021402\|Ga0210385_10006452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	7054	Open in IMG/M
3300021402\|Ga0210385_10292675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1205	Open in IMG/M
3300021404\|Ga0210389_10023070	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4811	Open in IMG/M
3300021405\|Ga0210387_10451392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1141	Open in IMG/M
3300021406\|Ga0210386_10479008	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1075	Open in IMG/M
3300021407\|Ga0210383_10502504	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1047	Open in IMG/M
3300021477\|Ga0210398_10760206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	782	Open in IMG/M
3300021479\|Ga0210410_10450942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1151	Open in IMG/M
3300021560\|Ga0126371_11376805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	837	Open in IMG/M
3300022467\|Ga0224712_10366878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300022513\|Ga0242667_1020733	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	688	Open in IMG/M
3300022523\|Ga0242663_1034267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	834	Open in IMG/M
3300022525\|Ga0242656_1041163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	774	Open in IMG/M
3300022528\|Ga0242669_1055818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	686	Open in IMG/M
3300022557\|Ga0212123_10015924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	9278	Open in IMG/M
3300022712\|Ga0242653_1054916	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	655	Open in IMG/M
3300022714\|Ga0242671_1046158	Not Available	710	Open in IMG/M
3300022721\|Ga0242666_1176737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300022724\|Ga0242665_10324517	Not Available	545	Open in IMG/M
3300022726\|Ga0242654_10099140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	913	Open in IMG/M
3300022726\|Ga0242654_10286546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	602	Open in IMG/M
3300023056\|Ga0233357_1008074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1102	Open in IMG/M
3300025915\|Ga0207693_11246649	Not Available	559	Open in IMG/M
3300025928\|Ga0207700_10235733	Not Available	1558	Open in IMG/M
3300025928\|Ga0207700_10789819	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	849	Open in IMG/M
3300026067\|Ga0207678_10002582	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	16509	Open in IMG/M
3300026555\|Ga0179593_1021952	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3115	Open in IMG/M
3300026557\|Ga0179587_10066882	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2107	Open in IMG/M
3300027037\|Ga0209005_1003064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1933	Open in IMG/M
3300027164\|Ga0208994_1002045	Not Available	2012	Open in IMG/M
3300027505\|Ga0209218_1046938	All Organisms → cellular organisms → Bacteria	867	Open in IMG/M
3300027817\|Ga0209112_10348118	Not Available	528	Open in IMG/M
3300027884\|Ga0209275_10122609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1353	Open in IMG/M
3300027895\|Ga0209624_10230647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1231	Open in IMG/M
3300027905\|Ga0209415_10162965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2205	Open in IMG/M
3300027905\|Ga0209415_10532367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	893	Open in IMG/M
3300027908\|Ga0209006_10027003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5202	Open in IMG/M
3300027908\|Ga0209006_10475994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1044	Open in IMG/M
3300027908\|Ga0209006_11004737	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	663	Open in IMG/M
3300028047\|Ga0209526_10120258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1845	Open in IMG/M
3300028379\|Ga0268266_10426834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1257	Open in IMG/M
3300028536\|Ga0137415_11080162	Not Available	615	Open in IMG/M
3300028556\|Ga0265337_1000033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	60717	Open in IMG/M
3300028556\|Ga0265337_1154647	Not Available	621	Open in IMG/M
3300028800\|Ga0265338_10200722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1504	Open in IMG/M
3300029636\|Ga0222749_10412024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	718	Open in IMG/M
3300030626\|Ga0210291_10785650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	846	Open in IMG/M
3300030863\|Ga0265766_1025932	Not Available	504	Open in IMG/M
3300030969\|Ga0075394_12029880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562	Open in IMG/M
3300030981\|Ga0102770_11174753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	737	Open in IMG/M
3300031057\|Ga0170834_106210012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	833	Open in IMG/M
3300031231\|Ga0170824_112698919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	552	Open in IMG/M
3300031616\|Ga0307508_10592881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	709	Open in IMG/M
3300031708\|Ga0310686_103389814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1787	Open in IMG/M
3300031708\|Ga0310686_117861578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	8175	Open in IMG/M
3300031715\|Ga0307476_10497736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	903	Open in IMG/M
3300031715\|Ga0307476_10501219	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	899	Open in IMG/M
3300031715\|Ga0307476_10692229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	755	Open in IMG/M
3300031718\|Ga0307474_10069501	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2613	Open in IMG/M
3300031754\|Ga0307475_10244991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1436	Open in IMG/M
3300031823\|Ga0307478_10292409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1332	Open in IMG/M
3300031823\|Ga0307478_11420886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	575	Open in IMG/M
3300031939\|Ga0308174_10255352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1364	Open in IMG/M
3300032756\|Ga0315742_12774167	Not Available	563	Open in IMG/M
3300032756\|Ga0315742_13050571	Not Available	540	Open in IMG/M
3300032770\|Ga0335085_10069803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4653	Open in IMG/M
3300032805\|Ga0335078_10043030	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6696	Open in IMG/M
3300032893\|Ga0335069_11601122	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	698	Open in IMG/M
3300032895\|Ga0335074_10058134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5288	Open in IMG/M
3300032896\|Ga0335075_10016828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10895	Open in IMG/M
3300032896\|Ga0335075_10914072	Not Available	802	Open in IMG/M
3300033545\|Ga0316214_1007092	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1490	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.33%
Host-Associated	Host-Associated	13.67%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.58%
Plants	Host-Associated → Plants	9.35%
Aquatic	Environmental → Aquatic	5.76%
Arthropoda	Host-Associated → Arthropoda	2.88%
Human	Host-Associated → Human	1.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.58%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.47%
Freshwater	Environmental → Aquatic → Freshwater	3.60%
Digestive System	Host-Associated → Arthropoda → Digestive System	2.88%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.16%
Digestive System	Host-Associated → Human → Digestive System	1.44%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.44%
Roots	Host-Associated → Plants → Roots	1.44%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.99%
Loam	Environmental → Terrestrial → Soil → Loam	17.27%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.04%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.32%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.88%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	2.88%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.16%
Large Intestine	Host-Associated → Human → Digestive System → Large Intestine	1.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.44%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.44%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	29.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.34%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.04%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.88%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	2.88%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.16%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.16%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.44%
Fecal	Host-Associated → Human → Digestive System → Large Intestine → Fecal	1.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.44%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.44%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.72%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.72%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.58%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.51%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	10.07%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.47%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.04%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.88%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.88%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.88%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	2.88%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.16%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.44%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.44%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.44%
Host-Associated	Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated	1.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.44%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.44%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.72%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.72%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.72%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.72%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004799	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300004800	Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010143	Soil microbial communities from Mekong Delta, Cambodia to study soil gas exchange rates - MK-CA-DRY metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010162	Labiotermes labralis P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Lab288 P1 (version 2)	Host-Associated	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010876	Boreal forest soil eukaryotic communities from Alaska, USA - W5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020069	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020076	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)	Environmental	Open in IMG/M
3300020077	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300020610	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021151	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_06_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022523	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022712	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022714	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022721	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027037	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027164	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027817	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030626	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO410-VDE110SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030863	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030969	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030981	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PO 4C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032756	Forest Soil Metatranscriptomics Site 2 Humus Litter Mineral Combined Assembly	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_102859152	3300001661	Forest Soil	MPEVSGTVHEAETDALTSDELLVEEVSIDGMCGVY*
JGI12627J18819_102596571	3300001867	Forest Soil	MPEVSTGHEAETEALTSDELLVEEVSIDGMCGVY*
JGIcombinedJ26739_1002442532	3300002245	Forest Soil	MPEVSSTVHETETEALTSDELLVEEVSIDGMCGVY*
JGIcombinedJ26739_1008485332	3300002245	Forest Soil	MPEVSTPVVSSTVHEAEAEALTSDELLVEEVSIDGMCGVY*
JGIcombinedJ51221_101468681	3300003505	Forest Soil	MPEVSSPVFTSTAHEAETEVLTTDELLVEEVSIDGMCGVY*
Ga0058863_119181773	3300004799	Host-Associated	LVPLMPAEVPMADHETETEALTSDELLVEEVSIDGMCGVY*
Ga0058861_100223421	3300004800	Host-Associated	WHLVPLMPAEVPMAEVPTAGHETETEALTSDELLVEEVSIDGMCGVY*
Ga0070658_100997491	3300005327	Corn Rhizosphere	MPAEVPMAEVPTAGHETETEALTSDELLVEEISIDGMCGVY*
Ga0070681_116715731	3300005458	Corn Rhizosphere	LMLAEVRMPEVSFPGHEVEAEALTSDELLVEEISIDGMCGVY*
Ga0070732_105865272	3300005542	Surface Soil	MPEVPSTGYEAETEALTSDELLVEEVSIDGMCGVY*
Ga0070665_1011278902	3300005548	Switchgrass Rhizosphere	MAEVPTAGHETETEALTSDELLVEEVSIDGMCGVY*
Ga0068857_1002818012	3300005577	Corn Rhizosphere	MPEVSSTGHEVETEALTSDELLVEEVSIDGMCGVY*
Ga0070763_101233902	3300005610	Soil	MPEVSTPVVTSTVHEAETEALTSDELLVEEVSIDGMCGVY*
Ga0070763_105264883	3300005610	Soil	MPELPSTGHEAETEDLTSDELLVEEVSIDGMCGVY*
Ga0068856_1007735912	3300005614	Corn Rhizosphere	MPEVSSPGHEVEAEALTSDELLVEEISIDGMCGVY*
Ga0070766_109157183	3300005921	Soil	MPEVSTPVVASTAHEAEAEALTSDELLVEEVSIDGMCGVY*
Ga0079222_124315032	3300006755	Agricultural Soil	MPEVSSTAHEAETEALASDELLVEEVSIDGMCGVY*
Ga0079221_102742492	3300006804	Agricultural Soil	MPEVPSTGHEVETEALTSDELLVEEVSIDGMCGVY*
Ga0102924_10485501	3300007982	Iron-Sulfur Acid Spring	MLAEVPMPEVSTPVVSGAAPEAETEALTSDELLVEEVSIDGMCGVY*
Ga0102924_10671423	3300007982	Iron-Sulfur Acid Spring	MRAEVPMTEVPTTGSETETEALTSDELLVEEVSIDGMCGVY*
Ga0105240_121218141	3300009093	Corn Rhizosphere	MLAEVRMPEVSSPGHEVEAEALTSDELLVEEISIDGMCGVY*
Ga0126374_110227641	3300009792	Tropical Forest Soil	VSMPEVSTGHEAETEDLTSGELLVEEVSIDGMCGVY*
Ga0123355_110721943	3300009826	Termite Gut	VPLMLAEVPMPEVSNTGHEAETEALTSDELLVEEVSIDGMCGVY*
Ga0123355_119002611	3300009826	Termite Gut	MLVEVPMPEVSSTGHEAETETLTSDELLVEEVSIDGMCGVY*
Ga0123356_102840212	3300010049	Termite Gut	MLAEVPMPEVPTAVPEAETDALTSDELLVEEVSIDGMCGVY*
Ga0126322_10499153	3300010143	Soil	LVPLTPAEVPMADHETETEALTSDELLVEEVSIDGMCGVY*
Ga0131853_106141452	3300010162	Termite Gut	MLAEVPMPEVASTGHEAETEALTSDELLVEEVSIDGMCGVY*
Ga0126370_119734021	3300010358	Tropical Forest Soil	MPELSSTVHETETEALTSDELLVEEVSIDGMCGVY*
Ga0134128_118429842	3300010373	Terrestrial Soil	MLAEVPVAEVPTTGHEAETDALASDELLVEEVSIDGMCGVY*
Ga0126381_1027475321	3300010376	Tropical Forest Soil	MPEVSSAGHEAETEVLAADELLVEEVSIDGMCGVY*
Ga0134126_105166533	3300010396	Terrestrial Soil	MLTEVPVPEVSSTEVEALTSDELLVEEVSIDGMCGVY*
Ga0126344_12220703	3300010866	Boreal Forest Soil	LVPLMVAEVHMPEVSTPVVSSPVVSGTGHEAEAEALTSDELLVEEVSIDGMCGVY*
Ga0126361_111757472	3300010876	Boreal Forest Soil	MRAEVPVPEVSTPVVTSTGHEAETEALASDELLVEEVSIDGMCGVY*
Ga0150983_103254383	3300011120	Forest Soil	MPEVSSTGHEAETEALSSDELLVEEVSIDGMCGVY*
Ga0150983_145587631	3300011120	Forest Soil	LAEVPMPEVSTPVVSGAAPEAETEALTSDELLVEEVSIDGMCGVY*
Ga0137393_102401081	3300011271	Vadose Zone Soil	MPEVSTPVVASTVHEAEAEALTSDELLVEEVSIDGMCG
Ga0137363_105393393	3300012202	Vadose Zone Soil	FPMAEVLTTEVSPAGDEAETEALTSDELLVEEVSIDGMCGVY*
Ga0137385_110592862	3300012359	Vadose Zone Soil	MPEVSNTGHEAETEALTSDELLVEEVSIDGMCGVY*
Ga0137413_102827342	3300012924	Vadose Zone Soil	MVAEVPMPEVSTPVVSSPVFSSPVVAGTVHEAEAEALTSDELLVEEVSIDGMCGVY*
Ga0164303_113300832	3300012957	Soil	MLAEVRMPEVSFPGHEVEAEALTSDELLVEEISIDGMCGVY*
Ga0181534_104841302	3300014168	Bog	MPEVIIGHEAETEALTSDELLVEEVSIDGMCGVY*
Ga0181531_100438443	3300014169	Bog	MRAEVPMPEVSSPVVPSTAHEAETEVLTTDELLVEEVSIDGMCGVY*
Ga0157379_106051963	3300014968	Switchgrass Rhizosphere	AEVPTAGDETETEALTSDELLVEEVSIDGMCGVY*
Ga0187809_100539043	3300017937	Freshwater Sediment	MPEVSSTEPEAETEALASDELLVEEVSIDGMCGVY
Ga0181514_14466382	3300019268	Peatland	MPEVSSPVVPSTAHEAETEVLTTDELLVEEVSIDGMCGVY
Ga0197907_107875123	3300020069	Corn, Switchgrass And Miscanthus Rhizosphere	MPEVSFPGHEVEAEALTSDELLVEEISIDGMCGVY
Ga0206356_100302683	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MPEVSSPGHEVEAEALTSDELLVEEISIDGMCGVY
Ga0206356_108126053	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MAEVPTAGHETETEALTSDELLVEEVSIDGMCGVY
Ga0206349_16692271	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	LVPLMLAEVRMPEVSSPGHEVEAEALTSDELLVEEISIDGMCGVS
Ga0206349_18454913	3300020075	Corn, Switchgrass And Miscanthus Rhizosphere	LVPLMPAEVPMAEVPTAGHETETEALTSDELLVEEVSIDGMCGVY
Ga0206355_11131791	3300020076	Corn, Switchgrass And Miscanthus Rhizosphere	LVPLMLAEVRMPEVSSPGHEVEAEALTSDELLVEEISIDGMCGVY
Ga0206351_106718321	3300020077	Corn, Switchgrass And Miscanthus Rhizosphere	LMLAEVRMPEVSFPGHEVEAEALTSDELLVEEISIDGMCGVY
Ga0206352_100750291	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	LVPLMLAEVRMPEVSGTEHEVETEALTSDELLVEEVSIDGMCGVY
Ga0206352_102026282	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	PLMPAEVPMAEVPTAGHETETEALTSDELLVEEVSIDGMCGVY
Ga0206350_113354571	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	HLVPLMLAEVRMPEVSSPGHEVEAEALTSDELLVEEISIDGMCGVY
Ga0206354_115595473	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	WHLVPLMPAEVPMAEVPTAGHETETEALTSDELLVEEVSIDGMCGVY
Ga0206353_105314703	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	MLAEVRMPEVSGTEHEVETEALTSDELLVEEVSIDGMCGVY
Ga0179592_102126251	3300020199	Vadose Zone Soil	SPVVAGTVHEAEAEALASDELLVEEVSIDGMCGVY
Ga0210403_103236842	3300020580	Soil	LRLAELTEHEAETEALTSDELLVEEVSIDGMCGVY
Ga0210395_106576583	3300020582	Soil	MAEVTATEVPAAGHEAETAALTSDELLVEEVSIDGMCGVY
Ga0210401_100521104	3300020583	Soil	MPEVSTPVVAGTGHEAEAEDLASEELLVEEVSIDGMCGVY
Ga0154015_10197801	3300020610	Corn, Switchgrass And Miscanthus Rhizosphere	HLVPLMPAEVPMAEVPTAGHETETEALTSDELLVEEVSIDGMCGVY
Ga0179584_12800331	3300021151	Vadose Zone Soil	LMLAEVPMPEVSSTGLEAETEVLTSDELLVEEVSIDGMCGVY
Ga0210405_111909331	3300021171	Soil	HMPEVSTPVVAGTGHEAEAEDLASEELLVEEVSIDGMCGVY
Ga0210408_101452022	3300021178	Soil	MPEVSSTGHEAETEALSSDELLVEEVSIDGMCGVY
Ga0210396_104516823	3300021180	Soil	MPEVSTPVVSTAVVAGTGHEAEAEALASEELLVEEVSIDGMCGVY
Ga0210393_106387982	3300021401	Soil	MPEVSTPVVSGAAPEAETEALTSDELLVEEVSIDGMCGVY
Ga0210385_100064526	3300021402	Soil	MAEVPSTGHETETEELTSDELLVEEVSIDGMCGVY
Ga0210385_102926752	3300021402	Soil	VPEVSTTGHEAETEALTSDELLVEEVSIDGMCGVY
Ga0210389_100230706	3300021404	Soil	MPEVSTTGHEAETEALTSDELLVEEVSIDGMCGVY
Ga0210387_104513923	3300021405	Soil	MPEVSTPVVTSTVHEAETEALTSDELLVEEVSIDGMCGVY
Ga0210386_104790082	3300021406	Soil	MRAEVHVPEVSTTGHEAETEALTSDELLVEEVSIDGMCGVY
Ga0210383_105025042	3300021407	Soil	MPEVSSTGHEAETEALTSDELLVEEVSIDGMCGVY
Ga0210398_107602062	3300021477	Soil	MAEVPGTGHETETEELTSDELLVEEVSIDGMCGVY
Ga0210410_104509422	3300021479	Soil	MPEVSTPVVAGTGHEAEAEALASEELLVEEVSIDGMCGVY
Ga0126371_113768051	3300021560	Tropical Forest Soil	MPEVSSAGHEAETEVLAADELLVEEVSIDGMCGVY
Ga0224712_103668781	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	MPEVPSTGHEVETEALTSDELLVEEVSIDGMCGVY
Ga0242667_10207333	3300022513	Soil	VPLMRAEVNVPEVSTTGHEAETEALNSDELLVEEVSIDGMCGVY
Ga0242663_10342673	3300022523	Soil	LVPLMVAEVHMPEVSTPVVAGTVVSGTVHEADAEVLTSDELLVEEVSIDGMCGVY
Ga0242656_10411633	3300022525	Soil	MAEIPTAEVSTTVFSAAGHEAEILASDELLVEEVSIDGMCGVY
Ga0242669_10558181	3300022528	Soil	LVPLMVAEVHMPEVSTPVVAGTGHEAEAEDLASEELLVEEVSIDGMCGVY
Ga0212123_1001592410	3300022557	Iron-Sulfur Acid Spring	MTEVPTTGSETETEALTSDELLVEEVSIDGMCGVY
Ga0242653_10549161	3300022712	Soil	LSATTPEVPMPEQVKEQVGETEALCSDELLVEEVSIDGMCGVY
Ga0242671_10461583	3300022714	Soil	PMPEVSSAGHETETEALTSDELLVEEVSIDGMCGVY
Ga0242666_11767373	3300022721	Soil	VPLMRAEVHVPEVSTTGHEAETEALTSDELLVEEVSIDGMCGVY
Ga0242665_103245172	3300022724	Soil	MPEVSSTGHESETEALTSDELLVEEVSIDGMCGVY
Ga0242654_100991401	3300022726	Soil	MAEVPTAEVSTTVFSAAGHEAEILASDELLVEEVSIDGMCGVY
Ga0242654_102865461	3300022726	Soil	EVSTPVVSNTEHEAAAEALTSDELLVEEVSIDGMCGVY
Ga0233357_10080743	3300023056	Soil	MPEVSTPVVSSPVVSSTVHEAEAEALTSDELLVEEVSIDGMCGVY
Ga0207693_112466492	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPEVPDTGHEAETEALTSDELLVEEVSIDGMCGVY
Ga0207700_102357332	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPEVSDTGHETETEALTSDELLVEEVSIDGMCGVY
Ga0207700_107898192	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MPEVSNTGLEAETEALTSDELLVEEVSIDGMCGVY
Ga0207678_100025829	3300026067	Corn Rhizosphere	MPEVSGTEHEVETEALTSDELLVEEVSIDGMCGVY
Ga0179593_10219525	3300026555	Vadose Zone Soil	VFSSPVVAGTVHEAEAEALTSDELLVEEVSIDGMCGVY
Ga0179587_100668822	3300026557	Vadose Zone Soil	MPEVSTPVVSSPVFSSPVVAGTVHEAEAEALTSDELLVEEVSIDGMCGVY
Ga0209005_10030642	3300027037	Forest Soil	MAQVPTAGHEAETEALTSDELLVEEVSIDGMCGVY
Ga0208994_10020452	3300027164	Forest Soil	MPEVSGTVHEAETDALTSDELLVEEVSIDGMCGVY
Ga0209218_10469382	3300027505	Forest Soil	MPEVSSTVHEAETEALTSDELLVEEVSIDGMCGVY
Ga0209112_103481182	3300027817	Forest Soil	MLAEVRMPEVSPAVHEAETEALTSDELLVEEVSIDGMCGVY
Ga0209275_101226092	3300027884	Soil	MPETPSAGHEPEAEALTSDELLVEEISIDGMCGVY
Ga0209624_102306472	3300027895	Forest Soil	MPELSSTGHEAETEALTSDELLVEEVSIDGMCGVY
Ga0209415_101629653	3300027905	Peatlands Soil	MPEVPSTGHEAEAEALASDELLVEEVSIDGMCGVY
Ga0209415_105323672	3300027905	Peatlands Soil	MPEVSSNGHETETEALTSDELLVEEVSIDGMCGVY
Ga0209006_100270033	3300027908	Forest Soil	MPEVSSTGHEAEAEALTSDELLVEEVSIDGMCGVY
Ga0209006_104759942	3300027908	Forest Soil	MPEVSSTVHEAETEVLTSDELLVEEVSIDGMCGVY
Ga0209006_110047371	3300027908	Forest Soil	MPEVSTPVVTDTGHEADAEALTSDELLVEEVSIDGMCGVY
Ga0209526_101202582	3300028047	Forest Soil	MPEVSTPVVSSTVHEAEAEALTSDELLVEEVSIDGMCGVY
Ga0268266_104268341	3300028379	Switchgrass Rhizosphere	MAEVPTAGHETETEALTSDELLVEEVSIDGMSGVY
Ga0137415_110801622	3300028536	Vadose Zone Soil	MLAEVPMPEVSSTGHEAETEALTSDELLVEEVSIDGMCGVY
Ga0265337_100003344	3300028556	Rhizosphere	MPEVSSTGHETETEALASDELLVEEVSIDGMCGVY
Ga0265337_11546473	3300028556	Rhizosphere	SRLPYRRHQEVRMPEQETETEALTSDELLVEEVSIDGMCGVY
Ga0265338_102007223	3300028800	Rhizosphere	MPEVPSTAHETETEALASDELLVEEVSIDGMCGVY
Ga0222749_104120243	3300029636	Soil	LVPLMDGGSMPEVLSGHEAETEALTSDELLVEEVSIDGMCGVY
Ga0210291_107856501	3300030626	Soil	RTEDLMPEVSSTGHEAETEALTSDELLVEEVSIDGMCGVY
Ga0265766_10259321	3300030863	Soil	LGATIAPEVPMAEVPTTGHEAETEELSSEELLVEEVSIDGMCGVY
Ga0075394_120298803	3300030969	Soil	MPEVPSTGHEAETEALTSDELLVEEVSIDGMCGVY
Ga0102770_111747533	3300030981	Soil	PAEVHVPEVSSTVQEAETEALTSDELLVEEVSIDGMCGVY
Ga0170834_1062100121	3300031057	Forest Soil	MAEVPTAEVPTAGHEAETEVLASDELLVEEVSIDGMCGVY
Ga0170824_1126989191	3300031231	Forest Soil	ALWHLVPLMIAEVPMTEVPTTVFSAAGHEAETEVLASDELLVEEVSIDGMCGVY
Ga0307508_105928811	3300031616	Ectomycorrhiza	MPEVSSIGHEAETEVLTSDELLVEEVSIDGMCGVY
Ga0310686_1033898142	3300031708	Soil	MPEVSTPVVSSTGHEAETEALTSDELLVEEVSIDGMCGVY
Ga0310686_1178615786	3300031708	Soil	MTEVSSPVLTSTAHEAETEVLTTDELLVEEVSIDGMCGVY
Ga0307476_104977362	3300031715	Hardwood Forest Soil	MPEVSTPVITSTVHEAETEALTSDELLVEEVSIDGMCG
Ga0307476_105012193	3300031715	Hardwood Forest Soil	MPEVSTTGPEAETEALTSDELLVEEVSIDGMCGVY
Ga0307476_106922293	3300031715	Hardwood Forest Soil	MRAEVPVTEVPTTGSETETEALTSDELLVEEVSIDGMCGVY
Ga0307474_100695012	3300031718	Hardwood Forest Soil	MPEVSTPVVSTPVVAGTGHEAEAEALASEELLVEEVSIDGMCGVY
Ga0307475_102449912	3300031754	Hardwood Forest Soil	MPEVSTPVVAGTGHEAEAEALASDELLVEEVSIDGMCGVY
Ga0307478_102924093	3300031823	Hardwood Forest Soil	LVPLMLAEVHMPEVSTTGPEAETEALTSDELLVEEVSIDGMCGVY
Ga0307478_114208863	3300031823	Hardwood Forest Soil	NTGLANTVLANPVHEAGTEALTSDELLVEEVSIDGMCGVY
Ga0308174_102553523	3300031939	Soil	MPEVSSTGHEVETEALTSDELLVEEVSIDGMCGVY
Ga0315742_127741671	3300032756	Forest Soil	PLMVAEVHMPEVSTPVVSSPVVSSTVHEAEAEALTSDELLVEEVSIDGMCGVY
Ga0315742_130505711	3300032756	Forest Soil	PEVSSPVVTSTAHEAETEALTSDELLVEEVSIDGMCGVY
Ga0335085_100698035	3300032770	Soil	MPDVSSTGHEAETDALTSDELLVEEVSIDGMCGVY
Ga0335078_100430304	3300032805	Soil	MPEVSSTAHEAETEALTSEELLVEEVSIDGMCGVY
Ga0335069_116011222	3300032893	Soil	MAEVPTTGHEADTDALASDELLVEEVSIDGMCGVY
Ga0335074_100581343	3300032895	Soil	MAEHEVATHEADADALASDELLVEEVSIDGMCGVY
Ga0335075_100168284	3300032896	Soil	MAEVPTTGHETETEALTSDELLVEEVSIDGMCGVY
Ga0335075_109140722	3300032896	Soil	MAEVPTTGHDTETETLTSDELLVEEVSIDGMCGVY
Ga0316214_10070923	3300033545	Roots	MAEVSGPVFTSTAHEAETEVLTTDELLVEEVSIDGMCGVY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F054751

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences