NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F054981

Metagenome Family F054981

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F054981
Family Type Metagenome
Number of Sequences 139
Average Sequence Length 58 residues
Representative Sequence VIVLARIVLRLLADLAGLVVPSATPLTRHRIGERLGVRVRSVLGGLHHEYLWAPASA
Number of Associated Samples 65
Number of Associated Scaffolds 139

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 22.06 %
% of genes near scaffold ends (potentially truncated) 30.94 %
% of genes from short scaffolds (< 2000 bps) 75.54 %
Associated GOLD sequencing projects 59
AlphaFold2 3D model prediction Yes
3D model pTM-score0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (64.748 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil
(23.022 % of family members)
Environment Ontology (ENVO) Unclassified
(47.482 % of family members)
Earth Microbiome Project Ontology (EMPO) Unclassified
(49.640 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 45.88%    β-sheet: 0.00%    Coil/Unstructured: 54.12%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.31
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 139 Family Scaffolds
PF00144Beta-lactamase 3.60
PF13610DDE_Tnp_IS240 2.88
PF00756Esterase 2.16
PF13450NAD_binding_8 2.16
PF00732GMC_oxred_N 1.44
PF13333rve_2 1.44
PF13416SBP_bac_8 1.44
PF07690MFS_1 1.44
PF05973Gp49 1.44
PF01370Epimerase 1.44
PF14864Alkyl_sulf_C 1.44
PF14559TPR_19 0.72
PF13415Kelch_3 0.72
PF028725_nucleotid_C 0.72
PF13744HTH_37 0.72
PF13414TPR_11 0.72
PF13460NAD_binding_10 0.72
PF01381HTH_3 0.72
PF07589PEP-CTERM 0.72
PF07676PD40 0.72
PF07719TPR_2 0.72
PF13676TIR_2 0.72
PF12697Abhydrolase_6 0.72
PF06863DUF1254 0.72
PF04366Ysc84 0.72
PF01488Shikimate_DH 0.72
PF00171Aldedh 0.72
PF08530PepX_C 0.72
PF10518TAT_signal 0.72
PF00326Peptidase_S9 0.72
PF07732Cu-oxidase_3 0.72
PF08238Sel1 0.72
PF04365BrnT_toxin 0.72
PF02627CMD 0.72
PF14690zf-ISL3 0.72
PF00795CN_hydrolase 0.72
PF13432TPR_16 0.72
PF00583Acetyltransf_1 0.72
PF13602ADH_zinc_N_2 0.72
PF13565HTH_32 0.72
PF01609DDE_Tnp_1 0.72
PF02371Transposase_20 0.72
PF13360PQQ_2 0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 139 Family Scaffolds
COG2367Beta-lactamase class ADefense mechanisms [V] 3.60
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 3.60
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 3.60
COG2303Choline dehydrogenase or related flavoproteinLipid transport and metabolism [I] 1.44
COG3657Putative component of the toxin-antitoxin plasmid stabilization moduleDefense mechanisms [V] 1.44
COG4679Phage-related protein gp49, toxin component of the Tad-Ata toxin-antitoxin systemDefense mechanisms [V] 1.44
COG2128Alkylhydroperoxidase family enzyme, contains CxxC motifInorganic ion transport and metabolism [P] 0.72
COG2132Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)Cell cycle control, cell division, chromosome partitioning [D] 0.72
COG2929Ribonuclease BrnT, toxin component of the BrnT-BrnA toxin-antitoxin systemDefense mechanisms [V] 0.72
COG2930Lipid-binding SYLF domain, Ysc84/FYVE familyLipid transport and metabolism [I] 0.72
COG2936Predicted acyl esteraseGeneral function prediction only [R] 0.72
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.72
COG3293TransposaseMobilome: prophages, transposons [X] 0.72
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.72
COG3547TransposaseMobilome: prophages, transposons [X] 0.72
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.72
COG5361Uncharacterized conserved proteinMobilome: prophages, transposons [X] 0.72
COG5421TransposaseMobilome: prophages, transposons [X] 0.72
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.72
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.72
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.72
COG0599Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase familyGeneral function prediction only [R] 0.72
COG07372',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase familyDefense mechanisms [V] 0.72
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.72


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms65.47 %
UnclassifiedrootN/A34.53 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001213|JGIcombinedJ13530_107728813All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1503Open in IMG/M
3300003858|Ga0031656_10010235All Organisms → cellular organisms → Bacteria3921Open in IMG/M
3300003858|Ga0031656_10010929All Organisms → cellular organisms → Bacteria → Proteobacteria3793Open in IMG/M
3300003858|Ga0031656_10014820Not Available3263Open in IMG/M
3300003858|Ga0031656_10030135All Organisms → cellular organisms → Bacteria → Proteobacteria2240Open in IMG/M
3300003858|Ga0031656_10033204Not Available2122Open in IMG/M
3300003858|Ga0031656_10249535All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300004070|Ga0055488_10063153All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria833Open in IMG/M
3300004070|Ga0055488_10219226All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300004282|Ga0066599_100184908All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1116Open in IMG/M
3300004481|Ga0069718_14578351All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria813Open in IMG/M
3300004481|Ga0069718_16227183All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria1137Open in IMG/M
3300004780|Ga0062378_10081364Not Available770Open in IMG/M
3300005833|Ga0074472_10238078All Organisms → cellular organisms → Bacteria903Open in IMG/M
3300005833|Ga0074472_10397209All Organisms → cellular organisms → Bacteria → Proteobacteria1094Open in IMG/M
3300005940|Ga0073913_10097151All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300006224|Ga0079037_100029462All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Kineobactrum → Kineobactrum salinum4031Open in IMG/M
3300006224|Ga0079037_100047179All Organisms → cellular organisms → Bacteria3340Open in IMG/M
3300006224|Ga0079037_100049463All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3277Open in IMG/M
3300006224|Ga0079037_100125300All Organisms → cellular organisms → Bacteria2207Open in IMG/M
3300006224|Ga0079037_100625790All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300006224|Ga0079037_101433467All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium689Open in IMG/M
3300006224|Ga0079037_102180618Not Available553Open in IMG/M
3300006224|Ga0079037_102532454All Organisms → cellular organisms → Bacteria511Open in IMG/M
3300009037|Ga0105093_10636126Not Available607Open in IMG/M
3300009075|Ga0105090_10168093All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Acidimangrovimonas → Acidimangrovimonas sediminis1364Open in IMG/M
3300009075|Ga0105090_10356098All Organisms → cellular organisms → Bacteria → Proteobacteria893Open in IMG/M
3300009075|Ga0105090_10421284Not Available813Open in IMG/M
3300009075|Ga0105090_10641518Not Available645Open in IMG/M
3300009075|Ga0105090_10862086Not Available551Open in IMG/M
3300009078|Ga0105106_10047152All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3183Open in IMG/M
3300009078|Ga0105106_10104115All Organisms → cellular organisms → Bacteria2089Open in IMG/M
3300009085|Ga0105103_10574084Not Available639Open in IMG/M
3300009087|Ga0105107_10202273All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1392Open in IMG/M
3300009091|Ga0102851_13099288Not Available534Open in IMG/M
3300009111|Ga0115026_10234347All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Xanthomonadaceae → Lysobacter1248Open in IMG/M
3300009111|Ga0115026_11483188All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300009120|Ga0117941_1210554Not Available531Open in IMG/M
3300009131|Ga0115027_10126429All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Kineobactrum → Kineobactrum salinum1523Open in IMG/M
3300009131|Ga0115027_11277481Not Available591Open in IMG/M
3300009131|Ga0115027_11290864Not Available589Open in IMG/M
3300009170|Ga0105096_10296481All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria824Open in IMG/M
3300009179|Ga0115028_10707890All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii770Open in IMG/M
3300009179|Ga0115028_11557900Not Available564Open in IMG/M
3300014306|Ga0075346_1116523All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300014312|Ga0075345_1000624All Organisms → cellular organisms → Bacteria4827Open in IMG/M
3300014319|Ga0075348_1030982All Organisms → cellular organisms → Bacteria1164Open in IMG/M
3300026065|Ga0208913_1011694All Organisms → cellular organisms → Bacteria → FCB group725Open in IMG/M
3300027393|Ga0209867_1054782All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300027721|Ga0209492_1067960All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium1258Open in IMG/M
3300027721|Ga0209492_1077589All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1173Open in IMG/M
3300027723|Ga0209703_1074382All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1315Open in IMG/M
3300027735|Ga0209261_10059054Not Available968Open in IMG/M
3300027778|Ga0209464_10174287Not Available762Open in IMG/M
3300027792|Ga0209287_10090410All Organisms → cellular organisms → Bacteria1141Open in IMG/M
3300027871|Ga0209397_10368673All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Kineobactrum → Kineobactrum salinum698Open in IMG/M
3300027890|Ga0209496_10220551Not Available913Open in IMG/M
3300027890|Ga0209496_10725834Not Available545Open in IMG/M
3300027897|Ga0209254_10127391All Organisms → cellular organisms → Bacteria2108Open in IMG/M
3300027897|Ga0209254_10272393All Organisms → cellular organisms → Bacteria1310Open in IMG/M
3300027897|Ga0209254_10331110All Organisms → cellular organisms → Bacteria → Proteobacteria1153Open in IMG/M
3300027897|Ga0209254_10804007All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Rhodocyclales → Zoogloeaceae → Azoarcus → Azoarcus indigens636Open in IMG/M
3300027897|Ga0209254_10996780Not Available546Open in IMG/M
3300027897|Ga0209254_11002193All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300027899|Ga0209668_10038635All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium SG8_312500Open in IMG/M
3300027899|Ga0209668_10433668Not Available864Open in IMG/M
3300027899|Ga0209668_10681911Not Available689Open in IMG/M
3300027975|Ga0209391_10020228All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3406Open in IMG/M
3300027975|Ga0209391_10020373All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3391Open in IMG/M
3300027975|Ga0209391_10041237All Organisms → cellular organisms → Bacteria2231Open in IMG/M
3300031784|Ga0315899_10854795Not Available826Open in IMG/M
3300031834|Ga0315290_10236119All Organisms → cellular organisms → Bacteria1594Open in IMG/M
3300031873|Ga0315297_10835148All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia767Open in IMG/M
3300031997|Ga0315278_10139529All Organisms → cellular organisms → Bacteria2470Open in IMG/M
3300031997|Ga0315278_10432022All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium SG8_311359Open in IMG/M
3300031997|Ga0315278_10444385Not Available1337Open in IMG/M
3300031997|Ga0315278_10712108All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300031997|Ga0315278_11705502Not Available599Open in IMG/M
3300032092|Ga0315905_10123714All Organisms → cellular organisms → Bacteria → Proteobacteria2594Open in IMG/M
3300032092|Ga0315905_10405229Not Available1280Open in IMG/M
3300032092|Ga0315905_10883064All Organisms → cellular organisms → Bacteria767Open in IMG/M
3300032092|Ga0315905_11577818Not Available511Open in IMG/M
3300032143|Ga0315292_10050006All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Crenotrichaceae → Crenothrix → Crenothrix polyspora3091Open in IMG/M
3300032143|Ga0315292_10085525All Organisms → cellular organisms → Bacteria → Proteobacteria2434Open in IMG/M
3300032156|Ga0315295_10821281Not Available932Open in IMG/M
3300032164|Ga0315283_10223725All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Flavobacteriaceae → Winogradskyella → Winogradskyella psychrotolerans → Winogradskyella psychrotolerans RS-32030Open in IMG/M
3300032164|Ga0315283_10231876All Organisms → cellular organisms → Bacteria1994Open in IMG/M
3300032164|Ga0315283_10589487All Organisms → cellular organisms → Bacteria1204Open in IMG/M
3300032164|Ga0315283_10683228All Organisms → cellular organisms → Bacteria1107Open in IMG/M
3300032164|Ga0315283_10808358All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae → Sinimarinibacterium → Sinimarinibacterium flocculans1004Open in IMG/M
3300032164|Ga0315283_11858013Not Available604Open in IMG/M
3300032164|Ga0315283_11984708All Organisms → cellular organisms → Bacteria → Proteobacteria579Open in IMG/M
3300032256|Ga0315271_10899709Not Available763Open in IMG/M
3300032342|Ga0315286_12038700Not Available532Open in IMG/M
3300032397|Ga0315287_10021901All Organisms → cellular organisms → Bacteria6758Open in IMG/M
3300032397|Ga0315287_10458327All Organisms → cellular organisms → Bacteria → Proteobacteria1513Open in IMG/M
3300032397|Ga0315287_10551506Not Available1367Open in IMG/M
3300032397|Ga0315287_11780481Not Available686Open in IMG/M
3300032397|Ga0315287_12005216All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae637Open in IMG/M
3300032397|Ga0315287_12230429All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300032397|Ga0315287_12511622Not Available553Open in IMG/M
3300032401|Ga0315275_10172117Not Available2408Open in IMG/M
3300032516|Ga0315273_10233455All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → asterids → campanulids → Asterales → Asteraceae → Asteroideae → Anthemideae → Anthemidinae → Tanacetum → Tanacetum cinerariifolium2509Open in IMG/M
3300032516|Ga0315273_12455542Not Available602Open in IMG/M
3300032516|Ga0315273_12568558Not Available585Open in IMG/M
3300033406|Ga0316604_10025301All Organisms → cellular organisms → Bacteria3073Open in IMG/M
3300033406|Ga0316604_10094863All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Pleioneaceae → Pleionea → Pleionea mediterranea1563Open in IMG/M
3300033406|Ga0316604_10153225All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Cystobacterineae1233Open in IMG/M
3300033406|Ga0316604_10175572All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae1151Open in IMG/M
3300033408|Ga0316605_10040151All Organisms → cellular organisms → Bacteria3222Open in IMG/M
3300033408|Ga0316605_10126367All Organisms → cellular organisms → Bacteria2033Open in IMG/M
3300033408|Ga0316605_10136057All Organisms → cellular organisms → Bacteria1971Open in IMG/M
3300033408|Ga0316605_10379869All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Pleioneaceae → Pleionea → Pleionea mediterranea1268Open in IMG/M
3300033408|Ga0316605_10625416All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → Rhodanobacter denitrificans1008Open in IMG/M
3300033408|Ga0316605_11217251All Organisms → cellular organisms → Bacteria → Proteobacteria727Open in IMG/M
3300033408|Ga0316605_12320553Not Available522Open in IMG/M
3300033408|Ga0316605_12377384All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300033413|Ga0316603_12192670Not Available521Open in IMG/M
3300033414|Ga0316619_10400709All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Pseudoteredinibacter → Pseudoteredinibacter isoporae1087Open in IMG/M
3300033416|Ga0316622_100008839All Organisms → cellular organisms → Bacteria → Proteobacteria7890Open in IMG/M
3300033416|Ga0316622_100114276All Organisms → cellular organisms → Bacteria → Proteobacteria2740Open in IMG/M
3300033416|Ga0316622_101325835All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Seongchinamella841Open in IMG/M
3300033418|Ga0316625_100483660All Organisms → cellular organisms → Bacteria970Open in IMG/M
3300033419|Ga0316601_100135299All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2066Open in IMG/M
3300033419|Ga0316601_100151881Not Available1969Open in IMG/M
3300033434|Ga0316613_10605638All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Oceanospirillales → Pleioneaceae → Pleionea → Pleionea mediterranea748Open in IMG/M
3300033434|Ga0316613_11160965Not Available532Open in IMG/M
3300033481|Ga0316600_10119253All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales1633Open in IMG/M
3300033482|Ga0316627_100529807Not Available1054Open in IMG/M
3300033483|Ga0316629_10342636All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Halieaceae → Kineobactrum → Kineobactrum salinum1029Open in IMG/M
3300033486|Ga0316624_10457757Not Available1082Open in IMG/M
3300033486|Ga0316624_10996441All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300033488|Ga0316621_10273907Not Available1096Open in IMG/M
3300033521|Ga0316616_100218513All Organisms → cellular organisms → Bacteria → Proteobacteria1920Open in IMG/M
3300033557|Ga0316617_100774595Not Available915Open in IMG/M
3300033557|Ga0316617_101118264Not Available777Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil23.02%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment21.58%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment13.67%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment11.51%
WetlandEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland7.19%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands6.47%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater3.60%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands2.88%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment2.16%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment1.44%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands1.44%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)1.44%
SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sand1.44%
FreshwaterEnvironmental → Aquatic → Freshwater → Pond → Sediment → Freshwater0.72%
WetlandEnvironmental → Aquatic → Marine → Wetlands → Sediment → Wetland0.72%
Lake SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Lake Sediment0.72%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001213Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)EnvironmentalOpen in IMG/M
3300003858Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DIEnvironmentalOpen in IMG/M
3300004070Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqA_D2EnvironmentalOpen in IMG/M
3300004282Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sedimentEnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300004780Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1FreshEnvironmentalOpen in IMG/M
3300005833Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBKEnvironmentalOpen in IMG/M
3300005940Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_25-Nov-14EnvironmentalOpen in IMG/M
3300006224Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaGEnvironmentalOpen in IMG/M
3300009037Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009075Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015EnvironmentalOpen in IMG/M
3300009078Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009085Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015EnvironmentalOpen in IMG/M
3300009087Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009111Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1EnvironmentalOpen in IMG/M
3300009120Lake sediment microbial communities from Tanners Lake, St. Paul, MNEnvironmentalOpen in IMG/M
3300009131Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1EnvironmentalOpen in IMG/M
3300009153Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009170Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015EnvironmentalOpen in IMG/M
3300009179Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1EnvironmentalOpen in IMG/M
3300014306Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D1EnvironmentalOpen in IMG/M
3300014312Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D1EnvironmentalOpen in IMG/M
3300014319Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleA_D1EnvironmentalOpen in IMG/M
3300026065Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027393Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_4-Nov-14 (SPAdes)EnvironmentalOpen in IMG/M
3300027721Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027723Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027735Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027792Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027871Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027890Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300027897Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)EnvironmentalOpen in IMG/M
3300027899Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)EnvironmentalOpen in IMG/M
3300027975Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300031784Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112EnvironmentalOpen in IMG/M
3300031834Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0EnvironmentalOpen in IMG/M
3300031873Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0EnvironmentalOpen in IMG/M
3300031997Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0EnvironmentalOpen in IMG/M
3300032092Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121EnvironmentalOpen in IMG/M
3300032143Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0EnvironmentalOpen in IMG/M
3300032156Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0EnvironmentalOpen in IMG/M
3300032164Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0EnvironmentalOpen in IMG/M
3300032256Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_topEnvironmentalOpen in IMG/M
3300032342Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G10_0EnvironmentalOpen in IMG/M
3300032397Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0EnvironmentalOpen in IMG/M
3300032401Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M
3300033406Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CTEnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300033413Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCTEnvironmentalOpen in IMG/M
3300033414Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_BEnvironmentalOpen in IMG/M
3300033416Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_CEnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033419Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCTEnvironmentalOpen in IMG/M
3300033434Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_bEnvironmentalOpen in IMG/M
3300033481Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CTEnvironmentalOpen in IMG/M
3300033482Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_CEnvironmentalOpen in IMG/M
3300033483Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_AEnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033487Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_AEnvironmentalOpen in IMG/M
3300033488Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_CEnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ13530_10772881333300001213WetlandVGPSPGRGVIASARIVLRLPVDLAGLVVVSFRSPRSRHRIGERLGVHARSVLGGLHHEYLLAPASA*
Ga0031656_1001023513300003858Freshwater Lake SedimentLWHDRDVIVLARIVLWSPVDLAGLVLPSATPLTRHRIGDALGVRAGSVPGGLHHEHRPAPASA*
Ga0031656_1001092943300003858Freshwater Lake SedimentVIVSARIVLRLLADQAGFVVRSATPLTRHRIGERLGVRARSVLGGLHNEYVLVPALA*
Ga0031656_1001482023300003858Freshwater Lake SedimentVIVPARIVFRLLADLAGLVVPSATPLTRHRIGERLGVRARSVLGGFRHEYLPAPVSA*
Ga0031656_1003013523300003858Freshwater Lake SedimentVIALARIVLPSLADLAGLVVPPATPPTRHRIGESLGVRVESVPGGLHHERLPAPA*
Ga0031656_1003320423300003858Freshwater Lake SedimentVIVLTRIVFRLLADVAGLVVPSATQPTRRRIGESLGVRAGSVQGGLRHESLPAPSPA*
Ga0031656_1024953523300003858Freshwater Lake SedimentVILLARVVLRLIADLVGLVVLSATSLTRHRIGEHLGVRARSVLGGLHNEYVLVPALA*
Ga0055488_1006315323300004070Natural And Restored WetlandsMIVPARIVLRLLADLAGLVALSATSLTRYRIGERLGVRARSVLGGLHHEY
Ga0055488_1021922613300004070Natural And Restored WetlandsVIVLARIVLRLLADLVGLVMLSATSLNRHRIGERLGVRARSVLGGLHHEYRLASALG*
Ga0066599_10018490823300004282FreshwaterVIALARIVLRSLADLAGLVLPSATPLTRHRIGDALGVRARSVLGGLRHEYRLAPAPV*
Ga0069718_1457835123300004481SedimentVIALARIVFRSLADLAGLVVPSATPLTRHRIGDALGVRARSVLGGLHHEYRLAPAPV*
Ga0069718_1622718333300004481SedimentVIALARIVLRVFADLAGLVVPSATPLTRYRIGERLGVRAKSVPVGLHHEYLPAPASV*
Ga0062378_1008136413300004780Wetland SedimentVIVLARIVPFSLADLAGLVVPSATPPTRRRIGEPLEVRAGSVPGGLHHERLPAPAPA*
Ga0074472_1023807823300005833Sediment (Intertidal)MIALAPIVVRSIADMAGLVVPSATPPTRHRIGEPLGVRAGSVPGGLHHEHLPAPASA*
Ga0074472_1039720933300005833Sediment (Intertidal)TFAELRHDRGVIAPARIVPRLLADLAGLVVPSATSLTRRRIGERLGVRAGSVLGGLRHEYLPASASA*
Ga0073913_1009715113300005940SandVIVLARIVVRSIADLAGLFAPSATPPTRHRIGEPLGVRAGSVPGGLHHEHLPAPASA*
Ga0079037_10002946223300006224Freshwater WetlandsVIALARIVLRSLADPVGLVVLSATQPTRHRIGERLGVRARSVLGGLHHEYVLVSAFA*
Ga0079037_10004717923300006224Freshwater WetlandsMVLARIALRLLAVLAGLVVLSATSLTRHRIGERLGMCAGLVPGCSQHEDLLAPASA*
Ga0079037_10004946323300006224Freshwater WetlandsMIGLARIVLRLLADLAGLVVPSATPLTHHRIGARLGARAGSVHAGLHYEYLLAPAPA*
Ga0079037_10012530023300006224Freshwater WetlandsVIVLALLVVRLFADLAGLVVPSATPLTHHRIGERLGARAGSVQGGLHHEYLPAPASA*
Ga0079037_10062579023300006224Freshwater WetlandsVIALARIALRLLADLADLVVPSATPLSRHRIGERHGVRARSVLGGLHHEYALVPALA*
Ga0079037_10143346723300006224Freshwater WetlandsVILLARIVLRLFADLAGLVMSSATPPTRRRIGDRLGVRAGSVPGSLHHEYLPAPRVGVIE
Ga0079037_10218061813300006224Freshwater WetlandsVIALARIALRSLADLAGLVVPSATPPTRRRIGEILGMRVGSALGGSRHERLPAPASA*
Ga0079037_10253245423300006224Freshwater WetlandsPWHDRGVIALARIVLRLFVDLAGLVVPSATTLTRRRIGEPLGVRAGSVPGGLHHEYLRAYASA*
Ga0105093_1063612613300009037Freshwater SedimentVIALARIVLRSLADLAGLVVPSATPLTRHRIGDALGVRARSVLGGLHHEYRLVPELA*
Ga0105090_1016809333300009075Freshwater SedimentVIVLAGIVLRLLADLAGLVEPPATPLTRHRIGERLGVRASSLLGGLHHEYLLVPALA*
Ga0105090_1035609813300009075Freshwater SedimentMGLARIVLRSAVDLAGLVVPSATPLTRHRIGERLGVRARSVLGGLHHEYLLAPALV*
Ga0105090_1042128423300009075Freshwater SedimentMIVLARIVLRLLADLAGLVAPSATPLTHHRIGERLGARAGSVHGGLHYEYLLAPAPA*
Ga0105090_1064151823300009075Freshwater SedimentVIVLARIVLRLLADLAGLVVPSATPLTRHRIGERLGVRVRSVLGGLHHEYLWAPASA*
Ga0105090_1086208613300009075Freshwater SedimentVIALARIVLRSLADLAGLVVPSATPLTRHRIGDALGVRARSVLGGLHHEYRLV
Ga0105106_1004715223300009078Freshwater SedimentMIVPARIVLRLLADLAGLVALSATSLTRHRIGERLGVRASSLLGGLHHEYLLVPALA*
Ga0105106_1010411513300009078Freshwater SedimentVIVPARIVLRSLADLAGLVVPSATPLTRHRIGDALGVRARSVLGGLHHEYRLVPELA*
Ga0105103_1057408413300009085Freshwater SedimentRFGTFADLWHDRGVIALARIVLRSLADLAGLVVPSATPLTRHRIGDALGVRARSVLGGLHHEYRLVPELA*
Ga0105107_1020227313300009087Freshwater SedimentMIVPARIVLRLLADLAGLVALSATSLTRHRIGERLGVRARSVLGGLHHEYLLVPALA*
Ga0102851_1309928813300009091Freshwater WetlandsMRLETNSPSCGAVGELWHDRSVIVLARIVLRSLADPAGLVMSSATRLTRYRIGEPLGVRVGSLPGGLHYEYSPVPASA*
Ga0115026_1023434713300009111WetlandVIALARIALRLLADLADLVVPSATPLSRHRIGQRHGVRARSVLGGLHHEYRLAPASA*
Ga0115026_1148318823300009111WetlandVIVLARIVLRSLADLAGLVVPSATPLTRHRIGERLGVRAQSVLGGLHHEYLLARALA*
Ga0117941_121055413300009120Lake SedimentRIVLRSLADLAGLVVPSATPLTRHRIGDALGVRARSVLGGLHHEYRLVPELA*
Ga0115027_1012642923300009131WetlandVIASARIVLRSLADLAGLVVLSATQPTRHRIGERLGVRARSVLGGLHHEYVLVSAFA*
Ga0115027_1127748123300009131WetlandGVIVLAQIVVGLLADSAGLGVPSATPLIRRRIGEPLGVRVGSVPGGLRHEHLPAPASA*
Ga0115027_1129086423300009131WetlandVIASARIVLRSLADPAGLVVPSATQVTRDRIGERLGVRVGSALGGSHHEHLRAPVGVIE*
Ga0105094_1042835513300009153Freshwater SedimentVIALARIVVRSLADLAGLVVPSATPLTRHRIGDALGVRARSVL
Ga0105096_1029648123300009170Freshwater SedimentVIALARIVLRSLADLAGLVVPSATPLTRHQIGDALGVRARSVLGGLHHEYVLVPALA*
Ga0115028_1070789013300009179WetlandRCGTVSDLWHDRDVIAPARIVVRSIADPAGLVMSSATPLTHHRIGEPLGVRVGSVPGGLRHEHLPAPASA*
Ga0115028_1155790013300009179WetlandVGELWHDRSVIVLARIVLRSLADPAGLVMSSATRLTRYRIGEPLGVRVGSLPGGLHYEYSPVPASA*
Ga0075346_111652323300014306Natural And Restored WetlandsMVLARIVLRLLADLVGLVVPSATPLTRHRIGERLGVRARSVLGGLHHEYVLAPA*
Ga0075345_100062453300014312Natural And Restored WetlandsVIALARIVLRSLADLAGLVVPSATPLTRHRIGERLRVRARSVLGGLHHEYLLAPASA*
Ga0075348_103098213300014319Natural And Restored WetlandsMVLARIVLRLLADLVGLVVPSATPLTRHRIGERLGVRARSVLGGLHHEYVL
Ga0208913_101169423300026065Natural And Restored WetlandsMVLARIVLRLLADLVGLVVPSATPLTRHRIGERLGVRARSVLGGLHHEYVLAPA
Ga0209867_105478213300027393SandGVVALARFVVQLFADLTGLVVPSATPLTRRRIGEPLGVRVGSVPGGLHHEYLRAYASA
Ga0209492_106796013300027721Freshwater SedimentVIALARIVLRSLADLAGLVAPSATPLTRHRIGERLGVRVGSLPGGSPHEYLLVPASA
Ga0209492_107758923300027721Freshwater SedimentVIALARIVLRSLTDLAGLVVPSATPLTRHRIGDALGVRARSVLGGLHHEYRLVPELA
Ga0209703_107438223300027723Freshwater SedimentMIVPARIVLRLLADLAGLVALSATSLTRHRIGERLGVRARSVLGGLHHEYLLVPALA
Ga0209261_1005905423300027735Wetland SedimentVIVLARIVLRSLADLVGLVVPSATPPTRRRIGEPLEVRAGSVPGGLHHERLPAPAPA
Ga0209464_1017428713300027778Wetland SedimentRYVIAPARIVLRSLADLAGLVVPSATQLTHHRIGVPLGARARAVPVGLHHEHLRAPVGVI
Ga0209287_1009041013300027792Freshwater SedimentIALARIVLRSLADLAGLVVPSATPLTRHRIGDALGVRARSVLGGLHHEYRLVPELA
Ga0209397_1036867313300027871WetlandVIASARIVLRSLADLAGLVVLSATQPTRHRIGERLGVRARSVLGGLHHEYVLVSAFA
Ga0209496_1022055113300027890WetlandRLETNSPSCGAVGELWHDRSVIVLARIVLRSLADPAGLVMSSATRLTRYRIGEPLGVRVGSLPGGLHYEYSPVPASA
Ga0209496_1072583413300027890WetlandVIVLARIVLRLLANQAGLVAPDPPSEVVPSAKPLTRRRIGEPLGVRVRSVLGGLHHELSAGARVGVIG
Ga0209254_1012739133300027897Freshwater Lake SedimentVIVPARIVFRLLADLAGLVVPSATPLTRHRIGERLGVRARSVLGGFRHEYLPAPVSA
Ga0209254_1027239323300027897Freshwater Lake SedimentVIALARIVLPSLADLAGLVVPPATPPTRHRIGESLGVRVESVPGGLHHERLPAPA
Ga0209254_1033111013300027897Freshwater Lake SedimentLWHDRDVIVLARIVLWSPVDLAGLVLPSATPLTRHRIGDALGVRAGSVPGGLHHEHRPAPASA
Ga0209254_1080400723300027897Freshwater Lake SedimentFAELRHDRGVIVSARIVLWLVADLAGLVAPSATPLTRRRIGEPLGARAGSVLDGLHHERLPAHA
Ga0209254_1090541013300027897Freshwater Lake SedimentVGSIDLPLLAGLAGLVVPFATQPTRHRLGERLEVRARSVQSGLRHESLPAPA
Ga0209254_1099678023300027897Freshwater Lake SedimentVVELARIVLRLLAGLASLVARSATPLTRHRLGEHLSVRARSVLGGLHHEYLLAPAWA
Ga0209254_1100219323300027897Freshwater Lake SedimentVILLARVVLRLIADLVGLVVLSATSLTRHRIGEHLGVRARSVLGGLHNEYVLVPALA
Ga0209668_1003863533300027899Freshwater Lake SedimentVIALARIVLRLLADLAGLVVLLLRSQRFDHLPGERLGVRARSVSRGLHQEYLPAPASA
Ga0209668_1043366833300027899Freshwater Lake SedimentVIALARIVVGFLADMAGLVVPSATLLTRRRIGERLGVHAGSVLGGLHHEHRPAPA
Ga0209668_1068191113300027899Freshwater Lake SedimentMPSRDLRRGEIAFARIVVGLPAEPAGLVVPSATPLARHRIGERLGVRAKSVLGGLHHEYLLAP
Ga0209391_1002022843300027975Freshwater SedimentMIVPARIVLRLLADLAGLVALSATSLTRHRIGERLGVRASSLLGGLHHEYLLVPALA
Ga0209391_1002037323300027975Freshwater SedimentMIVLARIVLRLLADLAGLVAPSATPLTHHRIGERLGARAGSVHGGLHYEYLLAPAPA
Ga0209391_1004123723300027975Freshwater SedimentVIVLAGIVLRLLADLAGLVEPPATPLTRHRIGERLGVRASSLLGGLHHEYLLVPALA
Ga0315899_1085479513300031784FreshwaterMVLRLLADQGGLVVRSATPLARRRIGERLGVRAGSVLGGLHHEYLLASASA
Ga0315290_1023611933300031834SedimentVVALARIVLRLLADLAGLVVPSATPPTRHRIRERLGVRARSVLGGLHHEYLLAPALA
Ga0315297_1083514823300031873SedimentVIALARIVVQLLADLAGLVVPSVTPLTRHRLGERLGVRARSVLAGLHHEYLPAPALA
Ga0315278_1013952913300031997SedimentRVVLRLLADLAGLVAPSATPLTRHRIGERLAVRARSVLGGLHHEYLLSLALA
Ga0315278_1043202223300031997SedimentIVLARIVVRSIADLAGLFAPSATPLTRRRTGESLDVRAGSVLGGLHHEYLPATGLA
Ga0315278_1044438523300031997SedimentVIAPAQIVLRSLADVADLVVPSATPPTRHRIGERLGVRAGSVPGGLHHEHLPAPALA
Ga0315278_1071210823300031997SedimentVNALAGIVLRLLADLAGLVVPSAPPRTRHRIGQHLGVRAGTLLGGPHHGYLLAPASA
Ga0315278_1170550213300031997SedimentCGMIVLARIVLRLLADLAGLGVLSLRSRRSRRRIGERLGVRVRSLPGDRHHEYLPAPASA
Ga0315905_1012371423300032092FreshwaterVIVPARIVLRLLADLAGLFAPSATPLTRHRIGERLVVRARSVLGGLHHEYDLVPVLA
Ga0315905_1040522923300032092FreshwaterMIVLARIVLRLLADLAGLGVLSLRSRRSRRRIGERLGVRVRSLPGDRHHEYLPAPASA
Ga0315905_1088306423300032092FreshwaterILVARIVVGLLADLAGLVVPSATPPTRHRIGQPLGVRAGSVLGGFHQEYLAAPASA
Ga0315905_1157781823300032092FreshwaterSPSCGVIALARIVVGLPADLADLVVPSATSLTRRRSGESLGVRAGSVPGGLHHDHLPGARVGVIG
Ga0315292_1005000623300032143SedimentVIALARIVLRIFADLASLVVPSATPPTRHRIGERRGVRARSVLGGLHHEYLLVHALA
Ga0315292_1008552523300032143SedimentMIVLARIVLPLLADLAGLVVPPATPPTRRRLGERLAVRAGSVPGGLRHECLAAPA
Ga0315295_1082128123300032156SedimentMIVLARIVVGLPADPAVLVVPSAPPLTRRRIGEPLGVRAGSVPGGSHHECLTAYA
Ga0315283_1022372523300032164SedimentRRTLAEPWRDRGVIALARIVLRSLADPAGLVVPSATPPTRRRIGDAFGVSAGSVPGGLRHESLRAPASA
Ga0315283_1023187623300032164SedimentVVALARIVLRLLADLASLVVPSATPPTRHRIRERLGVRARSVLGGLHHEYLLAPALA
Ga0315283_1058948723300032164SedimentVIAPARIVLRSIADLADLVVPSATPLTRRRIGEILGVRVGSVPGGLRHEYLPAPASA
Ga0315283_1068322833300032164SedimentMIVLAGIVLRSLADLAGLVVPAATPPTLRRIGERLGVRVGSMPGGLRHDCLPGPASA
Ga0315283_1080835833300032164SedimentVIVLARIVPWVLADLVGLDVPSATPLTSHRIGERLGVRARSVLGGLNHECL
Ga0315283_1185801313300032164SedimentFARIVLRSLADPAGLVVPSATPLTRHRIGERLGVRVGSLPGGVHHDCLPAPA
Ga0315283_1198470813300032164SedimentVIALARIALRSLADLAGLVAPSATPPTRRRIGESLGVRVGSALGGSHHEHLPAYA
Ga0315271_1089970923300032256SedimentVIALARIVLRLLAELAGLVVPSATPPIRHRIGEPLGVRAGSVLGGLHHEYLPAPASA
Ga0315286_1203870023300032342SedimentVIALTRIVVRLLADLAGLVVPSLSSRRFRNRIGERLGVRAGSVLGGVHHE
Ga0315287_1002190143300032397SedimentMIPSARIVLRSLADLAGLVVPSATPLTRRRIGERLGVRVGSVQGALHHEYLPGPASA
Ga0315287_1045832713300032397SedimentVIVLVRIVPWVLADLVGLDVPSATRLTSHRIGEPLGVRAGSVPGGVHHENLPAPASA
Ga0315287_1055150623300032397SedimentVIVLARIDLWVLADLAGLVVPSATPPPRRRIGERLGVRVRSMPGGLHHEHLPASASA
Ga0315287_1178048113300032397SedimentRGVIALARIVFRLLADLAGLAVLSIRSWRFRHRMGERLGVRARSVSRGLHQEYLPAPASA
Ga0315287_1200521623300032397SedimentRRTLAEPWRDRDVIVLARIVLRSLADPAGLDVPSATAPTRRRIGEPLRVRVGSVPRGSHHERLPTPTSARSGICGAQRS
Ga0315287_1223042913300032397SedimentLWHDRGVIALARIVLRLLADLAGLVVPPATQQARHRIGERLGVRARSVLGGLHHEYRPAPAVA
Ga0315287_1251162213300032397SedimentVISLARIVVGLLADLAGLVVPSATPLTRRPIGERLAVRVKSLLGGSRHEYLPGPA
Ga0315275_1017211713300032401SedimentDRGVIELARIVLRLLADLASLVARSATPLTRHRIGEHLAVRARSVPGGLHHEYLPAPALA
Ga0315273_1023345533300032516SedimentSRGVIVFARIVPLVLTDPAGLVVPSAPPLTRHRIGEPLGARAGSVPGGSHHEHLPAAASA
Ga0315273_1245554213300032516SedimentVAEPWHDRGVTAFARIVLRSLADPAGLVVPSATPLTRHRIGERLGVRVGSLPGGVHHDCLPAPA
Ga0315273_1256855823300032516SedimentVIALARIVVQLLADLAGLVVPSVTPLTRHRLGERLGVRARSVLGGLHHEYLPAPALA
Ga0316604_1002530123300033406SoilMVLARIALRLLAVLAGLVVLSATSLTRHRIGERLGMCAGLVPGCSQHEDLLAPASA
Ga0316604_1009486313300033406SoilVIALARIALRLLADLADLVVPSATPLSRHRIGECHGVRARSVLGGLHHEYVLAPALA
Ga0316604_1015322513300033406SoilSSSRGVIVLAQIVVGLLADSAGLGVPSATPLIRRRIGEPLGVRVGSLPSGLHHEYLPAPA
Ga0316604_1017557213300033406SoilVIALARIVLRSLADPVGLVVLSATQPTRHRIGERLGVRARSVLGGLHHEYVLVSAFA
Ga0316605_1004015133300033408SoilVIVLALLVVRLFADLAGLVVPSATPLTHHRIGERLGARAGSVQGGLHHEYLPAPASA
Ga0316605_1012636733300033408SoilVIALARIILGLPADLAGLVAPSATPLTRRRIGERLAVRARSVLGGLHLEYLPAPALA
Ga0316605_1013605713300033408SoilMIVPARIVLRLPADLADLVVPSATPLSRHRIGERHGVRARSVLGGLHHEYVLVPALA
Ga0316605_1037986923300033408SoilVIALARIALRLLADLADLVVPSATPLSRHRIGERHGVRARSVLGGLHHEYVLAPALA
Ga0316605_1062541623300033408SoilVLVLARIAVRSFADLAGLVVPSATPLTRHRIGERVGVRARSVLCGLHHEHLLAPALA
Ga0316605_1121725123300033408SoilMILLARTVVGLLADSAGLGVPSATPLIRHRIGERLGVHAGSVPGDSCHEDLPAPA
Ga0316605_1232055313300033408SoilVIALARIALRLLADLTGLVVRSATPLTRHRIGERFGVHARSVLGGVHHEYLPAPTLA
Ga0316605_1237738423300033408SoilVIVSARIVLRLLADQAGFVVRSATPLTRHRIGERLGVRAGSVLGGLHHEYLPAPALA
Ga0316603_1219267013300033413SoilVIALARIVLRSLADLVGLVVLSATQPTRHRIRERLGVRARSVLGGLHHKYQLMPALA
Ga0316619_1040070913300033414SoilVIVSAQIVLRSLADPAGLVVPSATQLTRDRIGEHLGVRVGSALGGLHHEHLPAPVGVIE
Ga0316622_10000883913300033416SoilVIASARIVLRSLADLAGLVVPSALPLARHRIGERLAVRVGSVPGGLHHENLRTPVGVIG
Ga0316622_10011427633300033416SoilMIGLARIVLRLLADLAGLVVPSATPLTHHRIGARLGARAGSVHAGLHYEYLLAPAPA
Ga0316622_10132583523300033416SoilADPWHDRGVIALARIVLRLFVDLAGLVVPSATTLTRRRIGEPLGVRAGSVPGGLHHEYLRAYASA
Ga0316625_10048366023300033418SoilVIALARIALRLLADLADLVVPSATPLSRHRIGERHGVRARSVLGGLHHEYALVPALA
Ga0316601_10013529943300033419SoilMIGLARIVLRLLADLAGLVVPSATPLTHHRIGARLGARAGSVHAGLHYEY
Ga0316601_10015188123300033419SoilVIVLARIVLRSLADPAGLVMSSATRLTRYRIGEPLGVRVGSLPGGLHYEYSPVPASA
Ga0316613_1060563823300033434SoilVIALARIALRLLADLADLVVPSATPLSRHRIGQRHGVRARSVLGGLHHEYVLVPALA
Ga0316613_1116096513300033434SoilGVIALVRIVVRLLADLTGIVVPSATPPARRRIGEPLGARTGSVPGELRHGLPSAPASA
Ga0316600_1011925323300033481SoilVIVLARIVLGLVADLAGLVVPSATPLTRHRIGERLGVRAQSVLGGLHHEYLPAPA
Ga0316627_10052980723300033482SoilMIVLARIVLRLLADLAGLVAPSATPLTHHRIGERLGARAGSVHAGLHYEYLLAPAPA
Ga0316629_1034263623300033483SoilVIALARIVLRSLADPVGLVVLSATQPTRHRIGERLGVRARSVLGGLHHEDVLVSAFA
Ga0316624_1045775713300033486SoilRTVIASARIVLRSIADLASLVAPSVPPLPRHRIGEPRGVRARSVLGGLHHEYLLVPALV
Ga0316624_1099644123300033486SoilLWHDRGVIAPARIVLRSLADMAGLVVPSATPPTRHRIDESLGVHAGSVPGGSHHECLPAPASA
Ga0316630_1004354213300033487SoilSLADRAGLVVPSATPLTRHRIGERLGVRVGSVPGGLHHEYRPAPASA
Ga0316621_1027390723300033488SoilMRLETNSPSCGAVGELWHDRSVIVLARIVLRSLADPAGLVMSSATRLTRYRIGEPLGVRVGSLPGGLHYEYSPVPASA
Ga0316616_10021851343300033521SoilGVIAPARIVLRLPADQAGVVVPSATQLARDRFGERLGVRARSLPGDSHHECFVAPASA
Ga0316617_10077459523300033557SoilVIASARIVLRSLADPAGLVVPSATQVTRDRIGERLGVRVGSALGGSHHEYLRAPVGVIE
Ga0316617_10111826423300033557SoilDLGVIASARIVLRSLADRAGLVVPSATPLTRHRIGERLGVRVGSVPGGLHHEYRPAPASA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.