Metagenome / Metatranscriptome Family F055113

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055113
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	65 residues
Representative Sequence	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRKSGQTQP
Number of Associated Samples	110
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	76.26 %
% of genes near scaffold ends (potentially truncated)	30.94 %
% of genes from short scaffolds (< 2000 bps)	83.45 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.281 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (23.022 % of family members)
Environment Ontology (ENVO)	Unclassified (29.496 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.921 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 12.90% Coil/Unstructured: 87.10%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF08240	ADH_N	23.02
PF12710	HAD	19.42
PF09278	MerR-DNA-bind	5.04
PF09861	Lar_N	2.88
PF01321	Creatinase_N	1.44
PF00583	Acetyltransf_1	1.44
PF00441	Acyl-CoA_dh_1	0.72
PF03816	LytR_cpsA_psr	0.72
PF14588	YjgF_endoribonc	0.72
PF12680	SnoaL_2	0.72
PF02559	CarD_CdnL_TRCF	0.72
PF03641	Lysine_decarbox	0.72
PF00903	Glyoxalase	0.72
PF13567	DUF4131	0.72
PF12390	Se-cys_synth_N	0.72
PF02770	Acyl-CoA_dh_M	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0789	DNA-binding transcriptional regulator, MerR family	Transcription [K]	5.04
COG0006	Xaa-Pro aminopeptidase	Amino acid transport and metabolism [E]	1.44
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	1.44
COG1316	Anionic cell wall polymer biosynthesis enzyme TagV/TagU, LytR-Cps2A-Psr (LCP) family (peptidoglycan teichoic acid transferase)	Cell wall/membrane/envelope biogenesis [M]	0.72
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.28 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	92.81 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	92.09 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	80.58 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	33.09 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	5.76 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.88 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	33.09 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	2.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.88 %
Actinopolymorphaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae	1.44 %
Unclassified	root	N/A	0.72 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	33.09 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	2.88 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.88 %
Actinopolymorpha	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	1.44 %
Unclassified	root	N/A	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y01AHTM6	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	511	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0887304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2043	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_104944422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105859023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1623	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105861025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1366	Open in IMG/M
3300000956\|JGI10216J12902_104316968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	549	Open in IMG/M
3300000956\|JGI10216J12902_105869949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1326	Open in IMG/M
3300004156\|Ga0062589_102117316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	574	Open in IMG/M
3300004463\|Ga0063356_100702691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1391	Open in IMG/M
3300004479\|Ga0062595_101158746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	682	Open in IMG/M
3300005162\|Ga0066814_10002098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1769	Open in IMG/M
3300005164\|Ga0066815_10124166	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
3300005172\|Ga0066683_10679554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300005179\|Ga0066684_10474314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	841	Open in IMG/M
3300005186\|Ga0066676_10012796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4193	Open in IMG/M
3300005187\|Ga0066675_10206540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1383	Open in IMG/M
3300005338\|Ga0068868_100334230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1294	Open in IMG/M
3300005339\|Ga0070660_100855873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	766	Open in IMG/M
3300005347\|Ga0070668_100787799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	844	Open in IMG/M
3300005406\|Ga0070703_10000029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	70192	Open in IMG/M
3300005440\|Ga0070705_100607547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	847	Open in IMG/M
3300005445\|Ga0070708_100020560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5569	Open in IMG/M
3300005445\|Ga0070708_100749845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	918	Open in IMG/M
3300005446\|Ga0066686_10688712	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300005447\|Ga0066689_10165578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1323	Open in IMG/M
3300005459\|Ga0068867_100322302	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1281	Open in IMG/M
3300005467\|Ga0070706_100368050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1339	Open in IMG/M
3300005468\|Ga0070707_100072238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3325	Open in IMG/M
3300005468\|Ga0070707_102134545	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	528	Open in IMG/M
3300005526\|Ga0073909_10066119	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1353	Open in IMG/M
3300005557\|Ga0066704_10441190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	861	Open in IMG/M
3300005560\|Ga0066670_10163701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1311	Open in IMG/M
3300005598\|Ga0066706_10171357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1649	Open in IMG/M
3300005617\|Ga0068859_101368567	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300006046\|Ga0066652_101906945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533	Open in IMG/M
3300006173\|Ga0070716_101225011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300006605\|Ga0074057_12249352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	6743	Open in IMG/M
3300006852\|Ga0075433_10032213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4489	Open in IMG/M
3300006871\|Ga0075434_100192512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2060	Open in IMG/M
3300006871\|Ga0075434_100261890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1748	Open in IMG/M
3300006903\|Ga0075426_10518111	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300006918\|Ga0079216_11619247	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300009012\|Ga0066710_100268464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2480	Open in IMG/M
3300009012\|Ga0066710_100302599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2343	Open in IMG/M
3300009012\|Ga0066710_100834924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1414	Open in IMG/M
3300009012\|Ga0066710_101196050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1178	Open in IMG/M
3300009137\|Ga0066709_100080535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	3883	Open in IMG/M
3300009137\|Ga0066709_100495362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1720	Open in IMG/M
3300009137\|Ga0066709_101155129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1140	Open in IMG/M
3300009137\|Ga0066709_101715189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	889	Open in IMG/M
3300009148\|Ga0105243_10128862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	2144	Open in IMG/M
3300009162\|Ga0075423_11176011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	818	Open in IMG/M
3300009553\|Ga0105249_10516454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1241	Open in IMG/M
3300009553\|Ga0105249_11346314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	786	Open in IMG/M
3300010322\|Ga0134084_10043997	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1294	Open in IMG/M
3300010362\|Ga0126377_11940799	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300010397\|Ga0134124_10608016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1072	Open in IMG/M
3300012019\|Ga0120139_1062335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	900	Open in IMG/M
3300012198\|Ga0137364_10608081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	824	Open in IMG/M
3300012200\|Ga0137382_10076664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2157	Open in IMG/M
3300012200\|Ga0137382_10502031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	862	Open in IMG/M
3300012201\|Ga0137365_10672479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	757	Open in IMG/M
3300012206\|Ga0137380_10720358	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300012206\|Ga0137380_11665390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	522	Open in IMG/M
3300012208\|Ga0137376_10117433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	2268	Open in IMG/M
3300012208\|Ga0137376_10307553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1375	Open in IMG/M
3300012208\|Ga0137376_10409834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1177	Open in IMG/M
3300012208\|Ga0137376_10880087	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300012209\|Ga0137379_10498102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1126	Open in IMG/M
3300012211\|Ga0137377_11185217	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300012285\|Ga0137370_10415626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	816	Open in IMG/M
3300012349\|Ga0137387_10340189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1086	Open in IMG/M
3300012356\|Ga0137371_10883484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	680	Open in IMG/M
3300012362\|Ga0137361_10978298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	765	Open in IMG/M
3300012951\|Ga0164300_10237637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	917	Open in IMG/M
3300012951\|Ga0164300_10380906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	768	Open in IMG/M
3300012955\|Ga0164298_10195134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1179	Open in IMG/M
3300012955\|Ga0164298_10563380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	775	Open in IMG/M
3300012957\|Ga0164303_10635159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	709	Open in IMG/M
3300012960\|Ga0164301_10942800	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	673	Open in IMG/M
3300012984\|Ga0164309_10064415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2183	Open in IMG/M
3300012985\|Ga0164308_10467855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	1047	Open in IMG/M
3300012987\|Ga0164307_11648401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300012988\|Ga0164306_10750269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	781	Open in IMG/M
3300012989\|Ga0164305_10161512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1533	Open in IMG/M
3300012989\|Ga0164305_10836034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	767	Open in IMG/M
3300013306\|Ga0163162_12180366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	636	Open in IMG/M
3300013306\|Ga0163162_13497461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	500	Open in IMG/M
3300014326\|Ga0157380_13002052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300015077\|Ga0173483_10043483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	1690	Open in IMG/M
3300017792\|Ga0163161_11197558	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	657	Open in IMG/M
3300018027\|Ga0184605_10004651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	4883	Open in IMG/M
3300018031\|Ga0184634_10051128	All Organisms → cellular organisms → Bacteria	1709	Open in IMG/M
3300018054\|Ga0184621_10002085	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5085	Open in IMG/M
3300018061\|Ga0184619_10348040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	676	Open in IMG/M
3300018061\|Ga0184619_10415951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	605	Open in IMG/M
3300018074\|Ga0184640_10464946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	561	Open in IMG/M
3300018081\|Ga0184625_10369655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	743	Open in IMG/M
3300018422\|Ga0190265_12182551	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300018433\|Ga0066667_10410274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1097	Open in IMG/M
3300018468\|Ga0066662_10082588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2203	Open in IMG/M
3300018468\|Ga0066662_12248756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300021073\|Ga0210378_10406175	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	505	Open in IMG/M
3300021080\|Ga0210382_10119461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1112	Open in IMG/M
3300025885\|Ga0207653_10000257	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33555	Open in IMG/M
3300025899\|Ga0207642_10058549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1778	Open in IMG/M
3300025910\|Ga0207684_10662899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	888	Open in IMG/M
3300025922\|Ga0207646_11618530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300025932\|Ga0207690_10430749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1057	Open in IMG/M
3300025933\|Ga0207706_10058455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3396	Open in IMG/M
3300025934\|Ga0207686_10134630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1700	Open in IMG/M
3300026537\|Ga0209157_1218324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300026538\|Ga0209056_10254713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha	1245	Open in IMG/M
3300027647\|Ga0214468_1008464	All Organisms → cellular organisms → Bacteria	2987	Open in IMG/M
3300028768\|Ga0307280_10156574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	789	Open in IMG/M
3300028791\|Ga0307290_10230871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300028807\|Ga0307305_10335969	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300028807\|Ga0307305_10354524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	665	Open in IMG/M
3300028810\|Ga0307294_10039814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1330	Open in IMG/M
3300028819\|Ga0307296_10200579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1083	Open in IMG/M
3300028819\|Ga0307296_10256470	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	952	Open in IMG/M
3300028875\|Ga0307289_10119778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1078	Open in IMG/M
3300028881\|Ga0307277_10258333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	769	Open in IMG/M
3300028884\|Ga0307308_10014977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3507	Open in IMG/M
3300028884\|Ga0307308_10651382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300030606\|Ga0299906_11139487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300030619\|Ga0268386_10015146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6005	Open in IMG/M
3300030993\|Ga0308190_1116755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	602	Open in IMG/M
3300031421\|Ga0308194_10111331	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	801	Open in IMG/M
3300031576\|Ga0247727_11168588	Not Available	518	Open in IMG/M
3300031820\|Ga0307473_11061110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300031949\|Ga0214473_11230690	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300031965\|Ga0326597_10913201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	897	Open in IMG/M
3300031965\|Ga0326597_11798456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300032180\|Ga0307471_103538793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	553	Open in IMG/M
3300033407\|Ga0214472_10321081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1469	Open in IMG/M
3300033407\|Ga0214472_10735570	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300033417\|Ga0214471_11056770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300034681\|Ga0370546_063682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.45%
Host-Associated	Host-Associated	15.83%
Engineered	Engineered	0.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.98%
Plants	Host-Associated → Plants	15.83%
Aquatic	Environmental → Aquatic	6.47%
Solid Waste	Engineered → Solid Waste	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.07%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.76%
Sediment	Environmental → Aquatic → Sediment	5.04%
Freshwater	Environmental → Aquatic → Freshwater	1.44%
Cave	Environmental → Terrestrial → Cave	0.72%
Grass	Engineered → Solid Waste → Grass	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.35%
Loam	Environmental → Terrestrial → Soil → Loam	7.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.19%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.88%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.44%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.72%
Composting	Engineered → Solid Waste → Grass → Composting	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	39.57%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	20.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.91%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.04%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	3.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.88%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.16%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.44%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.72%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.72%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	23.02%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	12.95%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	11.51%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.91%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.91%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	3.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.16%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.16%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.16%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.16%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.44%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.44%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.44%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.44%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.72%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005164	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012019	Permafrost microbial communities from Nunavut, Canada - A7_5cm_12M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300034681	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_121 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_00929220	2170459021	Switchgrass, Maize And Mischanthus Litter	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEF
ICChiseqgaiiDRAFT_08873042	3300000033	Soil	VPSVWGLSKTQANYRXAPXPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRXSGQTQP*
INPhiseqgaiiFebDRAFT_1049444222	3300000364	Soil	VPSVWGLSKTQANYRDAPKPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFAPRKSGQTQP*
INPhiseqgaiiFebDRAFT_1058590233	3300000364	Soil	MPSVWGLSKEQANYRDAPRPDVSCKACRFMFPPLSVGGCRYVRGVIEASKTCDEFTPRHPGAPPSSS*
INPhiseqgaiiFebDRAFT_1058610252	3300000364	Soil	MPSVWGLSKERANYRDAPKPDVSCKACKFMFPPLAVGSCRYVRGVIEGSKTCDEFIPRHPGEPSSP*
JGI10216J12902_1043169681	3300000956	Soil	MPSVWGLSKSQANYRDAPRANVSCRECKFMFPALAYGSCRYVRGVIEGSKTCDEFEARHGGHQPSPPSEPET*
JGI10216J12902_1058699492	3300000956	Soil	MPSVWGLSKSQANYRDAPTPAVRCKVCKFMFPPLAVGSCRYVRGVIEGSKTCDEFAPRHQGDRPST*
Ga0062589_1021173162	3300004156	Soil	HEANFASGRVAVPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFSPRKSGQTQP*
Ga0063356_1007026912	3300004463	Arabidopsis Thaliana Rhizosphere	VPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFAPRKSGQTQT*
Ga0062595_1011587462	3300004479	Soil	MPSVWGLSKSQANYRDAPTPAVQCKACKFMFPPLAVGSCRYVRGVIEGSKTCDEF
Ga0066814_100020982	3300005162	Soil	MPSVWGLSKEQANYRDAPTSAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRHQTDRPKT*
Ga0066815_101241662	3300005164	Soil	VWGLSKEQANYRDAPTSAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRHQTDRPKT*
Ga0066683_106795542	3300005172	Soil	QANYRDAPDPKVACRVCRYMFPPLAIGSCRYVRGMIEGSKTCDEFAPRDKSDPAQT*
Ga0066684_104743142	3300005179	Soil	LPRALGRARLARGGIAVPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKSEARQP*
Ga0066676_100127963	3300005186	Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKSDARQP*
Ga0066675_102065402	3300005187	Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFTPRKSEARQP*
Ga0068868_1003342302	3300005338	Miscanthus Rhizosphere	MPSVWGLSKTQANYRDAPSPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRHQSDRPST*
Ga0070660_1008558731	3300005339	Corn Rhizosphere	MPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFAPRHQSDRPST*
Ga0070668_1007877992	3300005347	Switchgrass Rhizosphere	MPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFAPRHKSERPNT*
Ga0070703_1000002960	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLALGSCRFVRGVIEGSKTCDEFTPRHQGDRSKT*
Ga0070705_1006075471	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFAPKKSGQAQA*
Ga0070708_1000205603	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPSVWGLSKQRANYRDAPTPAVECKVCEFMFPRLAFGSCKFVRGVIEGSKTCDEFAPRKSGDRPSG*
Ga0070708_1007498451	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPSVWGLSKGAANYRDAPKPEVACRVCKYMFPPLALGSCRFVRGVIEGSKTCDEFEPRHPADRPSG*
Ga0066686_106887121	3300005446	Soil	MPSVWGLSKQRANYRDAPTPAVSCKVCKYMFPPIAFGSCRYVRGVIEGSKTCDEFAPRKTGDRPTE*
Ga0066689_101655781	3300005447	Soil	EQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKSEARQP*
Ga0068867_1003223021	3300005459	Miscanthus Rhizosphere	VWGLSKTQANYRDAPTPAVQCKACKFMFPPLAVGSCRFVRGVIEGSKTCDEFAPRHQSDRPST*
Ga0070706_1003680503	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPSVWGLSKGAANYRDAPKPEVACRMCKYMFPPLALGSCRFVRGVIEGSKTCDEFEPRHPADRPPG*
Ga0070707_1000722381	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MPSVWGLSKGAANYRDAPKPEVACRMCKYMFPPLALGSCRFVRGVIEGSKTCDEFEPRHPADRPSG*
Ga0070707_1021345451	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFAP
Ga0073909_100661192	3300005526	Surface Soil	MPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFAPRHKSEHPNT*
Ga0066704_104411902	3300005557	Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKSEARQP*
Ga0066670_101637012	3300005560	Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVI
Ga0066706_101713572	3300005598	Soil	VPSVWGLSKGQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKSEARQP*
Ga0068859_1013685671	3300005617	Switchgrass Rhizosphere	VWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRHQSDRPST*
Ga0066652_1019069452	3300006046	Soil	VPSVWGLSKAKANYRDAPTPAVQCKVCKYMFPPLAIGSCRFVRGVIEGSKTCDEFAPRKSQPTQP*
Ga0070716_1012250111	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	AVPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLALGSCRFVRGVIEGSKTCDEFAPRHQSDRPST*
Ga0074057_122493522	3300006605	Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRHQTDRPKT*
Ga0075433_100322134	3300006852	Populus Rhizosphere	MPSVWGLSKQRANYRDAAKPEAACKACKFMFPPLAVGGCRYVRGVIEGSKTCDEFTPRHPGAAPSSS*
Ga0075434_1001925123	3300006871	Populus Rhizosphere	MPSVWGLSKEQANYRDAPKADVSCKACRFMFPPLAAGGCRYVRGVIEASKTCDEFTPRHPGDRPSPS*
Ga0075434_1002618902	3300006871	Populus Rhizosphere	MPSVWGLSKQRANYRDAAKPEASCKACKFMFPPLAVGGCRYVRGVIEGSKTCDEFTPRHPGAAPSSS*
Ga0075426_105181113	3300006903	Populus Rhizosphere	WGLSKQRANYRDAAKPEAACKACKFMFPPLAVGGCRYVRGVIEGSKTCDEFTPRHPGAAPSSS*
Ga0079216_116192472	3300006918	Agricultural Soil	MPKVWGLSKEQANYRPAPKPEVRCEVCKFMFPRLAIGGCRLVRGVIHASDTCNEFTPRTSA*
Ga0066710_1002684644	3300009012	Grasslands Soil	MPRIWGLSKRQANYRSARGPEVSCRSCKFMFPPLAIGGCRYVRGVIDGSYTCDEFITRQKDRPTR
Ga0066710_1003025993	3300009012	Grasslands Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKSAQTRP
Ga0066710_1008349241	3300009012	Grasslands Soil	VGASIAEEETMPSVWGLSKTQANYRDAPDPKVACRVCRYMFPPLAIGSCRYVRGMIEGSKTCDEFAPRDKSDPAQT
Ga0066710_1011960502	3300009012	Grasslands Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKSVQTRP
Ga0066709_1000805353	3300009137	Grasslands Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKSAQTRP*
Ga0066709_1004953623	3300009137	Grasslands Soil	MQSMPRIWGLSKRQANYRSARGPEVSCRSCKFMFPPLAIGGCRYVRGVIDGSYTCDEFITRRKDRPTR*
Ga0066709_1011551292	3300009137	Grasslands Soil	MPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLGIGSCRFVRGVIEGSKTCDEFTPRKSEARQP*
Ga0066709_1017151892	3300009137	Grasslands Soil	MPSVWGLSKTQANYRDAPDPKVACRVCRYMFPPLAIGSCRYVRGMIEGSKTCDEFAPRDKSDPAQT*
Ga0105243_101288621	3300009148	Miscanthus Rhizosphere	MPSVWGLSKTQANYRDAPSPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFA
Ga0075423_111760112	3300009162	Populus Rhizosphere	MPSVWGLSKEQANYRDAPKADVSCKACRFMFPPLSVGGCRYVRGVIEASKTCDEFTPRHPGAPPSSS*
Ga0105249_105164542	3300009553	Switchgrass Rhizosphere	VPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFAPRHQSDRPST*
Ga0105249_113463142	3300009553	Switchgrass Rhizosphere	MPSVCGLSKTQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEF
Ga0134084_100439972	3300010322	Grasslands Soil	RLARGGIAVPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIESSKTCDEFTPRKSDARQP*
Ga0126377_119407992	3300010362	Tropical Forest Soil	LSKHEANYRDAPNPDVSCRACKYMFPPVALGSCRYVRGVIEGAKTCDEFVARHERGRE*
Ga0134124_106080162	3300010397	Terrestrial Soil	VPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRHQSDRPST*
Ga0120139_10623352	3300012019	Permafrost	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKNEAWQP*
Ga0137364_106080812	3300012198	Vadose Zone Soil	VPSVWGLSKEQANYRDAPTPAVQCKGCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKSEARQP*
Ga0137382_100766641	3300012200	Vadose Zone Soil	MPSVWGLSKAQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFSPRKSGPAQP*
Ga0137382_105020311	3300012200	Vadose Zone Soil	LSTEQANYRDAPTPAVECKVCKFMFPPLAFGSCRFVRGVIEGSKTCHEFTPRKSEATQP*
Ga0137365_106724792	3300012201	Vadose Zone Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCRFMFPPLAIGSCRFVRGVIEGAKTCDEFTPRKDEARQP*
Ga0137380_107203582	3300012206	Vadose Zone Soil	RGRLARGGIAVPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLGIGSCRFVRGVIEGSKTCDEFTPRKNEARQP*
Ga0137380_116653902	3300012206	Vadose Zone Soil	MRGGIAVPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKSEARQP*
Ga0137376_101174331	3300012208	Vadose Zone Soil	MPSVWGLSKAQANYRDAPTPAVQCKVCKFMFPPLAIGSCRLVRGVIEGSKTCDEFTPRKSGQTQ
Ga0137376_103075531	3300012208	Vadose Zone Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCRYMFPPLAIGSCRFVRGVIEGSKTCDEFTHRKSGQTQP*
Ga0137376_104098341	3300012208	Vadose Zone Soil	MPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFSPRKSGQTQP*
Ga0137376_108800872	3300012208	Vadose Zone Soil	VPSVWGLSKAKANYRDAPTPAVQCKVCKYMFPPLAIGSCRFVRGVIEGSKTCDEFAPRKGEPTQP*
Ga0137379_104981022	3300012209	Vadose Zone Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKN
Ga0137377_111852171	3300012211	Vadose Zone Soil	VPSVWGLSKAKANYRDAPTPAVQCKVCKYMFPPLAIGSCRFVRGVIEGSKTCDEFAPRKSEPTQP*
Ga0137370_104156261	3300012285	Vadose Zone Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKYMFPPLAIGSCRFVRGVIEGSKTCDEFAPRKGEATQP*
Ga0137387_103401892	3300012349	Vadose Zone Soil	MRGGIAVPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDDFTPRKSEARQP
Ga0137371_108834842	3300012356	Vadose Zone Soil	VPSVWGLSKAKANYRDAPTAAVQCKVCKYMFPPLAIGSCRFVRGVIEGSKTCDEFAPRRSQPTQP*
Ga0137361_109782982	3300012362	Vadose Zone Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKNEARQP*
Ga0164300_102376371	3300012951	Soil	VPSVWGLSKTQANYRDAPSPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFSPRKAADRPSS*
Ga0164300_103809061	3300012951	Soil	VTSVWGLSKEQANYRDAPTPAVQCKVCKLMYHPLAIGNYRSIRCVIEGSKNNAEFAPRKAADRPSP*
Ga0164298_101951342	3300012955	Soil	MPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRKAADRPSP*
Ga0164298_105633802	3300012955	Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLTIGSCRFVRGVI
Ga0164303_106351591	3300012957	Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFSPRKAAHRPSS*
Ga0164301_109428002	3300012960	Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRKAADRPSP*
Ga0164309_100644153	3300012984	Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFSPRKAADRPSS*
Ga0164308_104678552	3300012985	Soil	VPSVWGLSKTQANYRDAPSPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRKSGQTQP*
Ga0164307_116484012	3300012987	Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFAPRHQSDSPKT*
Ga0164306_107502692	3300012988	Soil	SVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFSPRKAADRPSS*
Ga0164305_101615122	3300012989	Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRKSGQTQP*
Ga0164305_108360341	3300012989	Soil	MPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFSPRHQGDRPTA*
Ga0163162_121803662	3300013306	Switchgrass Rhizosphere	VPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFAPRHESGRPNT*
Ga0163162_134974611	3300013306	Switchgrass Rhizosphere	MPSVWGPSKTQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRHQSDRPST*
Ga0157380_130020522	3300014326	Switchgrass Rhizosphere	MPSVWGLSKTQANYRGAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFAPRHQSDRPST*
Ga0173483_100434832	3300015077	Soil	VPSVWGLSKEQANYRDAPTPTVQCRVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRKSGQTQP*
Ga0163161_111975582	3300017792	Switchgrass Rhizosphere	VPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFAPRHQSDRPST
Ga0184605_100046512	3300018027	Groundwater Sediment	VPSVWGLSKEQANYRDAPTPAVQCRVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRKSGQTQH
Ga0184634_100511282	3300018031	Groundwater Sediment	MPKVWGLSKQQANYHAAPKPSVQCRGCRFMFPPLAIGGCRHVRGVISGSATCNEFSPRKKGDRPT
Ga0184621_100020852	3300018054	Groundwater Sediment	VPSVWGLSKEQANYRDAPTPAVQCRVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRKSGQTQP
Ga0184619_103480401	3300018061	Groundwater Sediment	MPSVWGLSKEQANYRDAPSPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRKSGQSQP
Ga0184619_104159512	3300018061	Groundwater Sediment	VPSVWGLSKEQANYRDAPTPAVQCRVCKFMFPPLAIGSCRFVRGVIEGSKTCD
Ga0184640_104649461	3300018074	Groundwater Sediment	VGEDTGMPKVWGLSKQQANYHAAPKPSVQCRGCRFMFPPLAIGGCRYVRGVISASATCNEFSPRKKS
Ga0184625_103696552	3300018081	Groundwater Sediment	VPSVWGLSKDQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGAKTCDEFAPRKSGQTQP
Ga0190265_121825512	3300018422	Soil	MPKVWGLSKEQANYRPDPKPEVRCQVCKFMFPRLAIGGCRLVRGAIHASDTCDEFTPITKDTGAS
Ga0066667_104102742	3300018433	Grasslands Soil	MPSVWGLSKQQANYRDAPTPAVQCKVCKFMFPPLGIGSCRFVRGVIEGSKTCDEFTPRKSEARQP
Ga0066662_100825883	3300018468	Grasslands Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCEFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKDEARQP
Ga0066662_122487562	3300018468	Grasslands Soil	PSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKSEARQP
Ga0210378_104061751	3300021073	Groundwater Sediment	VPSVWGLSKEQANYRDAPSPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRKSGQTQP
Ga0210382_101194612	3300021080	Groundwater Sediment	MPSVWGLSKEQANYRDAPSPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKSEARQP
Ga0207653_1000025728	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLALGSCRFVRGVIEGSKTCDEFTPRHQGDRSKT
Ga0207642_100585492	3300025899	Miscanthus Rhizosphere	MPSVWGLSKTQANYRDAPSPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRHQSDRPST
Ga0207684_106628992	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPSVWGLSKGAANYRDAPKPEVACRMCKYMFPPLALGSCRFVRGVIEGSKTCDEFEPRHPADRPPG
Ga0207646_116185302	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPSVWGLSKGAANYRDAPKPEVACRMCKYMFPPLALGSCRFVRGVIEGSKTCDEFEPRHPADRPSG
Ga0207690_104307492	3300025932	Corn Rhizosphere	MPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFAPRHQSDRPST
Ga0207706_100584553	3300025933	Corn Rhizosphere	MPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFAPRHESGRPNT
Ga0207686_101346301	3300025934	Miscanthus Rhizosphere	ICSEPPAGADSPTGGEAMPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFAPRHKSEHPNT
Ga0209157_12183241	3300026537	Soil	LGARGRGRLARGGIAVPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKSDARQP
Ga0209056_102547132	3300026538	Soil	VPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKSDARQP
Ga0214468_10084643	3300027647	Soil	MPKVWGLSKEQAHYRPAPKPEVRCQACKFMLPRLAIGGCRLVRGVIHASDTCDEFTPATKDTTASG
Ga0307280_101565742	3300028768	Soil	VPSVWGLSKKQANYRDAPTPAVQCKVCKFMFPPVAIGSCRFVRGVIEGSKTCDEFAPRKSGQTQP
Ga0307290_102308711	3300028791	Soil	QANYRDAPTPAVQCKVCKFMFPPVAIGSCRFVRGVIEGSKTCDEFAPRKSGQTQP
Ga0307305_103359692	3300028807	Soil	MPSVWGLSKAQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKSEARQP
Ga0307305_103545242	3300028807	Soil	MPVPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFAPRKSGQTQP
Ga0307294_100398142	3300028810	Soil	SKEQANYRDAPTPAVQCRVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRKSGQTQH
Ga0307296_102005792	3300028819	Soil	VPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFSPRKSGQTQP
Ga0307296_102564702	3300028819	Soil	SKAQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDVFTPRKSEARQP
Ga0307289_101197782	3300028875	Soil	VPSVWGLSKEQANYRDGPTPAVQCRVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAP
Ga0307277_102583331	3300028881	Soil	GRLAGGRDAVPSVWGLSKEQANYRDAPTPAVQCKVCKFMFPPLALGSCRFVRGVIEGSKTCDEFAPRKSGQTQP
Ga0307308_100149772	3300028884	Soil	MPSVWGLSKAQANYRDAPTPTVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFTPRKSGSAQP
Ga0307308_106513821	3300028884	Soil	VPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFSPRKSGQTQP
Ga0299906_111394872	3300030606	Soil	MPKVWGLSKEQAHYRPAPKPEVRCQACKFMFPRLAIGGCRLVRGVIHPSDTCDEFTPATKDAAASG
Ga0268386_100151462	3300030619	Soil	MPKVWGLSKEQAHYRPAPKPEVRCQACKFMLPRLAIGGCRLVRGVIHASDTCDEFEPATKDTTASG
Ga0308190_11167552	3300030993	Soil	VPSVWGLSKKQANYRDAPTPAVQCKVCKFMFPPVAIGSCRFVRGVIEGSKTCDEFAPRKSGQTQH
Ga0308194_101113312	3300031421	Soil	PSVWGLSKEQANYRDAPTPAVQCRVCKFMFPPLAIGSCRFVRGVIEGSKTCDEFAPRKSGQTQH
Ga0247727_111685881	3300031576	Biofilm	PGGEDTGMPKVWGLSKQQANYHAAPKPSVQCRGCRFMFPPLAIGGCRYVRGVISGSATCNEFAPRTKGDRPA
Ga0307473_110611101	3300031820	Hardwood Forest Soil	WGLSKTQANYRDAPMPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCDEFAPRHKSERPNT
Ga0214473_112306902	3300031949	Soil	MPKVWGLSKGQANYRPAPKPEVRCQVCKFMFPRLAMGGCRLVRGVIHPSDTCDEFTPATKDAAASG
Ga0326597_109132012	3300031965	Soil	MPKVWGLSKEQANYRPAPKPEVRCQVCKFMFPRLAIGGCRLVRGAIHASDTCNEFTPVTKDTGASG
Ga0326597_117984562	3300031965	Soil	MEAMPKIWGLSKKQANYRPAPKPTVQCRACRFMFPPLAVGGCRYVRGVISGSATCDEFAPRRGGGSAS
Ga0307471_1035387932	3300032180	Hardwood Forest Soil	MPSVWGLSKTQANYRDAPTPAVQCKVCKFMFPPLAVGSCRFVRGVIEGSKTCD
Ga0214472_103210812	3300033407	Soil	MPKVWGLSKGQANYRPAPKPEVRCQVCKFMFPRLAMGGCRLVRGVIDPSDTCDEFTPATKDAAASG
Ga0214472_107355702	3300033407	Soil	MPKVWGLSKEQANYRPAPKPEVRCQVCKFMFPRLAVGSCRYVRGVIRASDTCDEFAPLTKDAASGG
Ga0214471_110567701	3300033417	Soil	MPKVWGLSKGQANYRPAPKPEVRCQVCKFMFPRLAMGGCRLVRGVIHPSDTCDEFTPATK
Ga0370546_063682_1_204	3300034681	Soil	DAVPSVWGLSKKQANYRDAPTPAVQCKVCKFMFPPVAIGSCRFVRGVIEGSKTCDEFAPRKSGQTQH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055113

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences