Metagenome / Metatranscriptome Family F055125

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055125
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	85 residues
Representative Sequence	MRMFMAILAATAAALALGGRPSEAQYAAQLYPYCSLSSSSGATNCYIRSREECGRDACISNPWYIGRERASPYLEGRKSLEPHYVRP
Number of Associated Samples	91
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	85.61 %
% of genes near scaffold ends (potentially truncated)	23.74 %
% of genes from short scaffolds (< 2000 bps)	82.73 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (50.360 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (20.144 % of family members)
Environment Ontology (ENVO)	Unclassified (42.446 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.115 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 28.70% β-sheet: 10.43% Coil/Unstructured: 60.87%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF00155	Aminotran_1_2	7.91
PF01734	Patatin	5.76
PF08281	Sigma70_r4_2	5.04
PF00248	Aldo_ket_red	5.04
PF12833	HTH_18	2.88
PF12536	DUF3734	2.16
PF00005	ABC_tran	2.16
PF04545	Sigma70_r4	2.16
PF00033	Cytochrome_B	1.44
PF04343	DUF488	1.44
PF05015	HigB-like_toxin	1.44
PF08031	BBE	1.44
PF13533	Biotin_lipoyl_2	1.44
PF03401	TctC	0.72
PF00873	ACR_tran	0.72
PF06314	ADC	0.72
PF12071	DUF3551	0.72
PF01292	Ni_hydr_CYTB	0.72
PF00174	Oxidored_molyb	0.72
PF00486	Trans_reg_C	0.72
PF07992	Pyr_redox_2	0.72
PF00211	Guanylate_cyc	0.72
PF02129	Peptidase_S15	0.72
PF03992	ABM	0.72
PF07690	MFS_1	0.72
PF00171	Aldedh	0.72
PF07885	Ion_trans_2	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG1752	Predicted acylesterase/phospholipase RssA, containd patatin domain	General function prediction only [R]	5.76
COG3621	Patatin-like phospholipase/acyl hydrolase, includes sporulation protein CotR	General function prediction only [R]	5.76
COG4667	Predicted phospholipase, patatin/cPLA2 family	Lipid transport and metabolism [I]	5.76
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	1.44
COG1290	Cytochrome b subunit of the bc complex	Energy production and conversion [C]	1.44
COG3189	Uncharacterized conserved protein YeaO, DUF488 family	Function unknown [S]	1.44
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	1.44
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.72
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.72
COG1969	Ni,Fe-hydrogenase I cytochrome b subunit	Energy production and conversion [C]	0.72
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.72
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.72
COG2864	Cytochrome b subunit of formate dehydrogenase	Energy production and conversion [C]	0.72
COG3038	Cytochrome b561	Energy production and conversion [C]	0.72
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.72
COG3658	Cytochrome b subunit of Ni2+-dependent hydrogenase	Energy production and conversion [C]	0.72
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.72
COG4117	Thiosulfate reductase cytochrome b subunit	Inorganic ion transport and metabolism [P]	0.72
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.72
COG4689	Acetoacetate decarboxylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.36 %
Unclassified	root	N/A	49.64 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.36 %
Unclassified	root	N/A	49.64 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.36 %
Unclassified	root	N/A	49.64 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	42.45 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	31.65 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	20.86 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Acidobacteria bacterium 13_1_40CM_2_56_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_56_5	0.72 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.79 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	1.44 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.72 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.72 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Acidobacteria bacterium 13_1_40CM_2_56_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_56_5	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7.91 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.72 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.72 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.72 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	0.72 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Acidobacteria bacterium 13_1_40CM_2_56_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_56_5	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.72 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.72 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	0.72 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.72 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.72 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Acidobacteria bacterium 13_1_40CM_2_56_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_56_5	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	49.64 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.72 %
Sphingomonas sp. H160509	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. H160509	0.72 %
Bradyrhizobium diazoefficiens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	0.72 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.72 %
Rhizobiales bacterium GAS191	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	0.72 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Acidobacteria bacterium 13_1_40CM_2_56_5	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_56_5	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105442594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1116	Open in IMG/M
3300001471\|JGI12712J15308_10080032	Not Available	827	Open in IMG/M
3300001661\|JGI12053J15887_10148401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1233	Open in IMG/M
3300001661\|JGI12053J15887_10341681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	725	Open in IMG/M
3300004268\|Ga0066398_10026395	Not Available	1026	Open in IMG/M
3300004633\|Ga0066395_10044812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1928	Open in IMG/M
3300004633\|Ga0066395_10828791	Not Available	557	Open in IMG/M
3300005332\|Ga0066388_100033273	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4909	Open in IMG/M
3300005332\|Ga0066388_100113280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3214	Open in IMG/M
3300005332\|Ga0066388_100588851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1737	Open in IMG/M
3300005332\|Ga0066388_105558069	Not Available	638	Open in IMG/M
3300005332\|Ga0066388_105864029	Not Available	621	Open in IMG/M
3300005363\|Ga0008090_15090060	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300005363\|Ga0008090_15230614	All Organisms → cellular organisms → Bacteria → Proteobacteria	1054	Open in IMG/M
3300005436\|Ga0070713_100240332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1649	Open in IMG/M
3300005436\|Ga0070713_101545431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	644	Open in IMG/M
3300005439\|Ga0070711_100246197	Not Available	1400	Open in IMG/M
3300005439\|Ga0070711_101228196	Not Available	649	Open in IMG/M
3300005447\|Ga0066689_10596300	Not Available	697	Open in IMG/M
3300005591\|Ga0070761_10020173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3702	Open in IMG/M
3300005591\|Ga0070761_10108333	All Organisms → cellular organisms → Bacteria → Proteobacteria	1606	Open in IMG/M
3300005713\|Ga0066905_102326319	Not Available	501	Open in IMG/M
3300005764\|Ga0066903_100253996	All Organisms → cellular organisms → Bacteria	2717	Open in IMG/M
3300005764\|Ga0066903_100655214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1837	Open in IMG/M
3300005764\|Ga0066903_101310956	Not Available	1353	Open in IMG/M
3300005764\|Ga0066903_101473939	All Organisms → cellular organisms → Bacteria → Proteobacteria	1283	Open in IMG/M
3300005764\|Ga0066903_101602718	Not Available	1235	Open in IMG/M
3300005764\|Ga0066903_103950997	Not Available	795	Open in IMG/M
3300005764\|Ga0066903_105551889	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300005764\|Ga0066903_107374716	Not Available	568	Open in IMG/M
3300006173\|Ga0070716_100869174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	703	Open in IMG/M
3300006173\|Ga0070716_101049623	Not Available	647	Open in IMG/M
3300006176\|Ga0070765_100295957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1495	Open in IMG/M
3300006854\|Ga0075425_100214951	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2211	Open in IMG/M
3300006854\|Ga0075425_100608953	Not Available	1256	Open in IMG/M
3300006871\|Ga0075434_100015163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	7383	Open in IMG/M
3300006871\|Ga0075434_100679633	Not Available	1047	Open in IMG/M
3300006871\|Ga0075434_100788915	Not Available	966	Open in IMG/M
3300006893\|Ga0073928_10247821	Not Available	1363	Open in IMG/M
3300006903\|Ga0075426_10004034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10451	Open in IMG/M
3300006904\|Ga0075424_100543330	All Organisms → cellular organisms → Bacteria → Proteobacteria	1241	Open in IMG/M
3300006904\|Ga0075424_100830591	Not Available	986	Open in IMG/M
3300006914\|Ga0075436_101263343	Not Available	558	Open in IMG/M
3300006954\|Ga0079219_11882114	Not Available	564	Open in IMG/M
3300007076\|Ga0075435_100429969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1137	Open in IMG/M
3300007265\|Ga0099794_10547293	Not Available	611	Open in IMG/M
3300007788\|Ga0099795_10026056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1966	Open in IMG/M
3300007788\|Ga0099795_10029954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1864	Open in IMG/M
3300009088\|Ga0099830_10042315	All Organisms → cellular organisms → Bacteria → Proteobacteria	3167	Open in IMG/M
3300009090\|Ga0099827_10586602	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300009143\|Ga0099792_10272449	Not Available	994	Open in IMG/M
3300009143\|Ga0099792_10540444	Not Available	735	Open in IMG/M
3300009143\|Ga0099792_10788813	Not Available	621	Open in IMG/M
3300010046\|Ga0126384_10010510	All Organisms → cellular organisms → Bacteria → Proteobacteria	5746	Open in IMG/M
3300010046\|Ga0126384_10472671	Not Available	1075	Open in IMG/M
3300010159\|Ga0099796_10155827	Not Available	902	Open in IMG/M
3300010159\|Ga0099796_10393809	Not Available	606	Open in IMG/M
3300010159\|Ga0099796_10504604	Not Available	542	Open in IMG/M
3300010359\|Ga0126376_11466948	Not Available	709	Open in IMG/M
3300010360\|Ga0126372_10317987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1378	Open in IMG/M
3300010362\|Ga0126377_10626050	Not Available	1123	Open in IMG/M
3300010366\|Ga0126379_11418968	Not Available	800	Open in IMG/M
3300010376\|Ga0126381_100022903	All Organisms → cellular organisms → Bacteria	7354	Open in IMG/M
3300010376\|Ga0126381_100128443	All Organisms → cellular organisms → Bacteria	3294	Open in IMG/M
3300010376\|Ga0126381_100954817	Not Available	1236	Open in IMG/M
3300010376\|Ga0126381_102545829	Not Available	733	Open in IMG/M
3300010376\|Ga0126381_103017555	Not Available	668	Open in IMG/M
3300010398\|Ga0126383_12827212	Not Available	567	Open in IMG/M
3300010398\|Ga0126383_13109616	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_56_5	542	Open in IMG/M
3300011270\|Ga0137391_10201358	All Organisms → cellular organisms → Bacteria → Proteobacteria	1731	Open in IMG/M
3300011271\|Ga0137393_10095903	All Organisms → cellular organisms → Bacteria → Proteobacteria	2413	Open in IMG/M
3300012202\|Ga0137363_10820555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300012203\|Ga0137399_10574601	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	947	Open in IMG/M
3300012363\|Ga0137390_10200443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1983	Open in IMG/M
3300012917\|Ga0137395_11191015	Not Available	534	Open in IMG/M
3300012918\|Ga0137396_10620996	Not Available	799	Open in IMG/M
3300012924\|Ga0137413_10207424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1321	Open in IMG/M
3300012944\|Ga0137410_10779080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	802	Open in IMG/M
3300012944\|Ga0137410_11094549	Not Available	682	Open in IMG/M
3300015245\|Ga0137409_10124546	All Organisms → cellular organisms → Bacteria → Proteobacteria	2372	Open in IMG/M
3300015245\|Ga0137409_10561570	Not Available	969	Open in IMG/M
3300016319\|Ga0182033_10262405	Not Available	1409	Open in IMG/M
3300016387\|Ga0182040_10211901	All Organisms → cellular organisms → Bacteria → Proteobacteria	1431	Open in IMG/M
3300016404\|Ga0182037_10205229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium diazoefficiens	1531	Open in IMG/M
3300016422\|Ga0182039_10192033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1622	Open in IMG/M
3300021170\|Ga0210400_10159098	Not Available	1823	Open in IMG/M
3300021170\|Ga0210400_10172347	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1751	Open in IMG/M
3300021170\|Ga0210400_11396421	Not Available	558	Open in IMG/M
3300021170\|Ga0210400_11678542	Not Available	500	Open in IMG/M
3300021180\|Ga0210396_10893234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	758	Open in IMG/M
3300021403\|Ga0210397_10137476	All Organisms → cellular organisms → Bacteria → Proteobacteria	1695	Open in IMG/M
3300021407\|Ga0210383_10168029	Not Available	1870	Open in IMG/M
3300021475\|Ga0210392_10307401	Not Available	1138	Open in IMG/M
3300021475\|Ga0210392_10542456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	860	Open in IMG/M
3300021560\|Ga0126371_10013622	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7387	Open in IMG/M
3300021560\|Ga0126371_10014398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium GAS191	7206	Open in IMG/M
3300021560\|Ga0126371_10044804	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4211	Open in IMG/M
3300021560\|Ga0126371_11427851	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300022557\|Ga0212123_10217495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	1400	Open in IMG/M
3300024330\|Ga0137417_1256436	Not Available	748	Open in IMG/M
3300025915\|Ga0207693_10818676	Not Available	717	Open in IMG/M
3300026557\|Ga0179587_10607826	Not Available	720	Open in IMG/M
3300027181\|Ga0208997_1017241	Not Available	1002	Open in IMG/M
3300027313\|Ga0207780_1083841	Not Available	535	Open in IMG/M
3300027381\|Ga0208983_1023316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1208	Open in IMG/M
3300027546\|Ga0208984_1001920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. H160509	3444	Open in IMG/M
3300027633\|Ga0208988_1085937	Not Available	787	Open in IMG/M
3300027663\|Ga0208990_1022648	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2039	Open in IMG/M
3300027667\|Ga0209009_1129915	Not Available	641	Open in IMG/M
3300027669\|Ga0208981_1000133	All Organisms → cellular organisms → Bacteria → Proteobacteria	11259	Open in IMG/M
3300027853\|Ga0209274_10141893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1206	Open in IMG/M
3300027882\|Ga0209590_10955571	Not Available	537	Open in IMG/M
3300027903\|Ga0209488_10947057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	601	Open in IMG/M
3300027903\|Ga0209488_11019702	Not Available	571	Open in IMG/M
3300027908\|Ga0209006_10000486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	37916	Open in IMG/M
3300027908\|Ga0209006_10002324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	17355	Open in IMG/M
3300031057\|Ga0170834_107966306	Not Available	763	Open in IMG/M
3300031231\|Ga0170824_110647696	Not Available	657	Open in IMG/M
3300031231\|Ga0170824_114537098	Not Available	685	Open in IMG/M
3300031708\|Ga0310686_119888777	Not Available	607	Open in IMG/M
3300031718\|Ga0307474_10318456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1200	Open in IMG/M
3300031719\|Ga0306917_10643498	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300031744\|Ga0306918_11182999	Not Available	591	Open in IMG/M
3300031798\|Ga0318523_10217905	All Organisms → cellular organisms → Bacteria → Proteobacteria	954	Open in IMG/M
3300031833\|Ga0310917_10816191	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300031890\|Ga0306925_12109089	Not Available	528	Open in IMG/M
3300031910\|Ga0306923_10463309	All Organisms → cellular organisms → Bacteria → Proteobacteria	1437	Open in IMG/M
3300031910\|Ga0306923_12181696	Not Available	556	Open in IMG/M
3300031912\|Ga0306921_11910361	All Organisms → cellular organisms → Bacteria → Proteobacteria	635	Open in IMG/M
3300031954\|Ga0306926_10260768	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2147	Open in IMG/M
3300032076\|Ga0306924_10222358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2168	Open in IMG/M
3300032174\|Ga0307470_10507372	Not Available	881	Open in IMG/M
3300032174\|Ga0307470_11485228	Not Available	563	Open in IMG/M
3300032205\|Ga0307472_100058862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2443	Open in IMG/M
3300032205\|Ga0307472_101260782	Not Available	709	Open in IMG/M
3300032892\|Ga0335081_11478146	Not Available	754	Open in IMG/M
3300033004\|Ga0335084_12095156	Not Available	550	Open in IMG/M
3300033289\|Ga0310914_10848965	Not Available	812	Open in IMG/M
3300034384\|Ga0372946_0285389	Not Available	800	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.81%
Host-Associated	Host-Associated	7.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.37%
Plants	Host-Associated → Plants	7.19%
Aquatic	Environmental → Aquatic	1.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.37%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.19%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.44%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	60.43%
Loam	Environmental → Terrestrial → Soil → Loam	29.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.19%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.44%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.44%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.09%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	24.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.04%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.44%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.44%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.44%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.44%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	20.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	12.95%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.63%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.63%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.04%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.88%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.16%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.44%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300004268	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027181	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027313	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 45 (SPAdes)	Environmental	Open in IMG/M
3300027381	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027546	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027633	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027669	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034384	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_KNG_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1054425943	3300000364	Soil	MRLSLTMLLAVAALAIVGAQPSAAQYAAQLYPYCSLSASTGATNCYVGSREECGRNACISNPWYIGHERARPYLEGRKPLE
JGI12712J15308_100800321	3300001471	Forest Soil	MRLFIAILLTAAAVLSFGARPSKAQYAAQLYPYCSLSSSTGAMSCYVSSRQQCGSSCISNPWYIGRQRALPYREGRKQAVPRYVRP*
JGI12053J15887_101484013	3300001661	Forest Soil	LRFWVLTLSTMLALLGFGTWPSEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRARPYLRGDRPLEPHYVRP*
JGI12053J15887_103416811	3300001661	Forest Soil	MRFWVLTLSTFLALLGFGTWPSEAQYAAQLYPYCKMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRAR
Ga0066398_100263952	3300004268	Tropical Forest Soil	MRIFVTILLLAASMLTFGAQPSQAQYAAQLYPYCSLSSSSGATNCYIRSREQCGRSSCISNPWYIGHERARPYLEGRKPLVPHYVRP*
Ga0066395_100448122	3300004633	Tropical Forest Soil	MSRFAIIGLAAAALPLLGATPSEAQYAAQLYPYCSLSSSGMTNCYLSSRAQCGRSVCISNPWYIGAERACSNLEGRKPLVPHYVRP*
Ga0066395_108287911	3300004633	Tropical Forest Soil	MRIFVTILLLAASMLTFGAQPSQAQYAAQLYPYCSLSSSSGATNCYIRSRDECGDTCISNPWYLGAQRARPYLEGRR
Ga0066388_1000332736	3300005332	Tropical Forest Soil	MNMPTARPRTEMRGWSLSMRRLATILLTAAALAVLGARPGHAQYAAQLYPYCSLSASNGATNCYVGSREACGRNVCISNPWYIGRERARPYLEGRRPLEPRYGRP*
Ga0066388_1001132803	3300005332	Tropical Forest Soil	MSRFAIIGLAAAALPLLGATPSEAQYAAQLYPYCSLSSSGMTNCYLSSRAQCGRSVCISNPWYIGAERARSNLEGRKPLVPHYVRP*
Ga0066388_1005888512	3300005332	Tropical Forest Soil	MRILLMTMAAASILTFGAQQSEAQYAAQLYPYCSLSSSSGATNCYIRSREECGRNACIQNPWYIGRARATPYLDGRKPLEPHYVRP*
Ga0066388_1055580692	3300005332	Tropical Forest Soil	SPQDLRRCESVSRQKNCKEFPMRRVLTSLAVAGLWVVGAPLSSAQYAAQLYPYCSLGSRTGATSCYIRSRDECGRNPCISNPWYLGRERARPYLEGRKPLEPHYVRP*
Ga0066388_1058640291	3300005332	Tropical Forest Soil	MRLSSIMLFAVAVLAIVGPQPAAAQFAAQLYPYCSLSASTGATNCYVGSREECGRNACISNPWYIGRERARPYLDGRKPLEPRYVRH*
Ga0008090_150900602	3300005363	Tropical Rainforest Soil	MSVRRGRIRLPTVLLAIAALALLGTRPSDAQYAAQFYPYCSLSAANGATNCYIRSREECGRNACISNPWYIGRERARSYLEGRTPLEPRYVRP*
Ga0008090_152306142	3300005363	Tropical Rainforest Soil	MSRFSSVLLAAAALPLLAATPSKAQYAAQLYPYCSLSASNGSTNCYISSRAQCGQSGCISNPWYIGAERARSYLDGRKALVLHYVKP*
Ga0070713_1002403322	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRIFVAILLAASAFGARPSEAQYAAQLYPYCSLSSSSGATNCYIRSREECGRNACIQNPWYIGRARALPYLEGRKPLVPHYMQP*
Ga0070713_1015454312	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRLSSTLLLAVAALAIVGPRPSAAQYAAQLYPYCSLSASNGATNCYVGSREECGRNACISNPWYIGRERARPYLEGRRPLAPRYLRP*
Ga0070711_1002461972	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRLPSIMLFAFAVLASVGPQPAAAQYAAQIYPYCSLSASTGTTNCYVGSREECGRNACISNPWYVGRERARPYLDGRKALVPRYLRP*
Ga0070711_1012281962	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	ALAFRARPSQAQYAAQLYPYCSSSSSSGATSCYYRSRAECGGSCISNPWYIGPQRAQPYLDGRRALEPHYVHP*
Ga0066689_105963002	3300005447	Soil	MKLCIAAMLAIVAASAFGARPSQAQYAAQLYPYCSLSSSSGATTCYYRSRAECPENCIGNPWYIGAQRARPYLEGRRAPAPHYVRP*
Ga0070761_100201734	3300005591	Soil	MRRLMAILLAAAAALALGGRPSEAQYAAQLYPYCSISSSSGATNCYIRSREECGRDACISNPWYIGRERALPYLEGRKSMKPHYVRP*
Ga0070761_101083331	3300005591	Soil	MRLFPAILLAAAAVLWFGAPSSKAQYAAQLYPYCSLSSSSGAMSCYVSSREQCGSSCISNPWYIGRQRALPYLQGRKQAVPRYVRP*
Ga0066905_1023263191	3300005713	Tropical Forest Soil	MRIFVTILLLAASMLTFGAQPSQAQYAAQLYPYCSPSSSSGATNCYIRSREQCGRSSCISNPWYIGHERARPYLEGRKPLVPHYVRP*
Ga0066903_1002539963	3300005764	Tropical Forest Soil	MRLFLSTLIASATLSMLAARPIEAQYAAQLYPYCSLSSSTGATNCYISSREQCGRSGCISNPWYIGPERARPYLEGRKSPEPHYVQP*
Ga0066903_1006552141	3300005764	Tropical Forest Soil	MNMPTARPRIEMRGWSLSMRRSATILLTAGALAVLGARPGHAQYAAQLYPYCSLSASNGATNCYVGSREACGRNVCISNPWYIGRERARPYLEGRRPLEPRYGRP*
Ga0066903_1013109562	3300005764	Tropical Forest Soil	VTRGRRELEIPEMRIFVTILLLAASMLTFGAQPSQAQYAAQLYPYCSLSSSSGATNCYIRSREQCGRSSCISNPWYIGHERARPYLEGRKPLVPHYVRP*
Ga0066903_1014739392	3300005764	Tropical Forest Soil	MSVRRGRIRLPTVLLAIAALALLGTRPSDAQYAAQFYPYCSLSAANGATSCYIRSREECGRNACISNPWHIGRERARSYLEGRTPLEPRYVRP*
Ga0066903_1016027181	3300005764	Tropical Forest Soil	MSRFSIVLLAAAALPLLAATPSKAQYAAQLYPYCSLSASNGSTNCYISSRAQCGQSGCISNPWYIGAERARSYLDGRKALVPHYVKP*
Ga0066903_1039509971	3300005764	Tropical Forest Soil	MRRFLAISIAAATLPMLAARPSEAQYAAQLYPYCSLSSSTGATNCHISSREQCDRSGCISNPWYIGRERARPYLDGRKPLEPHYVQP*
Ga0066903_1055518892	3300005764	Tropical Forest Soil	MKLFTSATLAIVASLAFDATPSKAQYAAQLYPYCSISSSSGATNCYIRSRDECGDTCISNPWYLGAQRARPYLEGRRTLAPRYVP*
Ga0066903_1073747162	3300005764	Tropical Forest Soil	MRRLVMILLAAALAALGARPSAAQYAAQLYPYCALSSGIGATNCHIGSREECGRSGCISNPWYIGRERARPYLEGRKTLEPHYVRP*
Ga0070716_1008691741	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRFWMLILSAIATSLAFGVQPSEAQYAAQLYPYCKMSSSSGATSCYYRSRAECGGSCISNPWYIGAQRAQPYLDGRRALEPRYVRP*
Ga0070716_1010496232	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MRMFMAILAATAAALALGGRPSEAQYAAQLYPYCSLSSSSGATNCYIRSREECGRDACISNPWYIGRERASPYLEGRKSLEPHYVRP*
Ga0070765_1002959572	3300006176	Soil	MRRLMAILLAAAAALALGGRPSEAQYAAQLYPYCSLSSSSGATNCYIRSREECGRDACISNPWYIGRERALPYLEGRKSMKPHYVRP*
Ga0075425_1002149513	3300006854	Populus Rhizosphere	MRLSSINLFAVAVLAIVGPQPAAAQYAAQLYPYCSLSASTGATNCYVGSREECGRNACISNPWYIGRERARPYRDGRKALVPRYVRP*
Ga0075425_1006089531	3300006854	Populus Rhizosphere	MRFWIVTLSTMVASLAFGTWPSEAQYAAQLYPYCAESSSSGAETCYYRSRAECGSSCISNPWYI
Ga0075434_1000151636	3300006871	Populus Rhizosphere	MRFWIVILSTIVASLAFGTRPSEAQYAAQLYPYCKMSSSSGATSCYYRSRAECGSSCISNPWYIGPQRAWPYLHGGRPLQPHYVRP*
Ga0075434_1006796333	3300006871	Populus Rhizosphere	MKRRPIVASFGRSEVKFCTAAMLAIVAVLPFGTQPSQAQYAAQLYPYCSQSSASGAETCYYRSRSECPENCISNPWYIGAGRARPYLEGRRALEPRYVRP*
Ga0075434_1007889152	3300006871	Populus Rhizosphere	MKFCSAAALAIVAALAFGTRPSQAQYAAQLYPYCSLSSSSGATSCYYRSRSECPDSCISNPWYIGPQRARPYLEGRRALVPHYVRP*
Ga0073928_102478213	3300006893	Iron-Sulfur Acid Spring	MRRFMAILVATAAILASGARPSEAQYAAQLYPYCVLSSSSGATSCYISSREECGRDPCIKNPWYIGRERALPYLEGRKSMVPHYVRP*
Ga0075426_100040347	3300006903	Populus Rhizosphere	MRVFVAILLAASAVTLGARPSTAQYAAQLYPYCSLSSSSGATNCYVRSREECGRNACIQNPWYIGRARALPYLEGRKPLVPHYMQP*
Ga0075424_1005433304	3300006904	Populus Rhizosphere	VGPQPAAAQYAAQIYPYCSLSASTGTTNCYVGSREECGRNACISNPWYVGRERARPYLDGRKALVPRYLRP*
Ga0075424_1008305911	3300006904	Populus Rhizosphere	MRFWIVTLSTMVASLAFGTWPSEAQYAAQLYPYCAESSSSGAETCYYRSRAECGSSCISNPWYIGPQ
Ga0075436_1012633431	3300006914	Populus Rhizosphere	MRLPSIMLFAFAVLASVGPKPAAAQYAAQIYPYCSLSASTGTTNCYVGSREECGRNACISNPWYVGRERARPYLDGRKALVPRYLRP*
Ga0079219_118821142	3300006954	Agricultural Soil	MRVFVAILLAASAVTLGARPSTAQYAAQLYPYCSLSSSSGATNCYVRSREECGRNACIQNPWYIGRARALPYLEGRK
Ga0075435_1004299691	3300007076	Populus Rhizosphere	AVLAIVGPQPAAAQYAAQLYPYCSLSASTGATNCYVGSREECGRNACISNPWYIGRERARPYRDGRKALVPRYVRP*
Ga0099794_105472931	3300007265	Vadose Zone Soil	MRFWVLTLSTMLALLGFGTWPSEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRARPYLRGDRPLEPHYVRP*
Ga0099795_100260561	3300007788	Vadose Zone Soil	MRFWVLTLSTILALLGFGTWPSEAQYAAQLYPYCKMGSSSGATSCYYRSRAECGGSCISNPWYIGPQRARPYLSGDRPLEP
Ga0099795_100299542	3300007788	Vadose Zone Soil	MRFWVLTLSTMLALLGFGTWPSEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRARPYLSGDRPLEPHYVRP*
Ga0099830_100423155	3300009088	Vadose Zone Soil	MKVLPAAVLAIMAALAFGATPSQAQYAAQLYPYCSLSSSSGATTCYFRSRAECSENCISNPWYIGAQRARPYLEGRRALVPHYVRP*
Ga0099827_105866021	3300009090	Vadose Zone Soil	MAAMLAIVATLAFGARPSQAQYAAQLYPYCALSSSSGATTCYYRSRAECGSNCISNPWYIGAQRAQPYLEGRRALVPHYVRP*
Ga0099792_102724492	3300009143	Vadose Zone Soil	MLALLGFGTWPSEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRARPYLRGDRPLEPHYVRP*
Ga0099792_105404441	3300009143	Vadose Zone Soil	MKFCIVTISTIVASLAFGTWPSEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRAQPYLQGRRALEPHYVRP*
Ga0099792_107888132	3300009143	Vadose Zone Soil	MRFWFLTLSTMLALLGFGTWPSEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRARPYLSGDRPLEPHYVRP*
Ga0126384_100105104	3300010046	Tropical Forest Soil	LEIPEMRIFVTILLLAASMLTFGAQPSQAQYAAQLYPYCSLSSSSGATNCYIRSREQCGRSSCISNPWYIGHERARPYLEGRKPLVPHYVRP*
Ga0126384_104726713	3300010046	Tropical Forest Soil	MLAIAAALAFGTQPSQAQYAAQLYPYCSLSSSSGATTCYHRTRAECPDSCIINPWYIGARRAQPYLEGRRALVPRYGRP*
Ga0099796_101558272	3300010159	Vadose Zone Soil	MKFCIVTISTIVASLAFGTWPSEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRAQPYLQGRRPLEPHYVRP*
Ga0099796_103938092	3300010159	Vadose Zone Soil	MLALLGFGTWPSEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRAR
Ga0099796_105046042	3300010159	Vadose Zone Soil	ALLGFGTWPSEAQYAAQLYPYCAMSSSSGATSCYYRSLAECGGSCISNPWYIGPQRARPYLRGDRPLEPHYVRP*
Ga0126376_114669481	3300010359	Tropical Forest Soil	ANGGCACCLPRGYHIREKDRAMRLSSIMLLALAVLAIVGPQPAAAQYAAQLYPYCSLSSSTGATNCYISSREECGRNACISNPWYIGRERARPYLDGRKPLEPRYVRP*
Ga0126372_103179873	3300010360	Tropical Forest Soil	LLGATPSEAQYAAQLYPYCSLSSSGMTNCYLSSRAQCGRSVCISNPWYIGAERARSNLEGRKPLVPHYVRP*
Ga0126377_106260501	3300010362	Tropical Forest Soil	MHLLSSIMLLALAVLAIVGPQPAAAQYAAQLYPYCSLSASTGATNCYISSRAQCGRSGCISNPWYIGAARARPYIEGRKALVPHYVKP*
Ga0126379_114189681	3300010366	Tropical Forest Soil	MKLFTSATLAIVASLAFGAAPSKAQYAAQLYPYCSISSSTGASNCYIRSRAECGNTCISNPWYLGAQRARPYLEGRRTLAPRYVP*
Ga0126381_1000229033	3300010376	Tropical Forest Soil	MRFLVATLLAASTLTFGARPSTAQYAAQLYPYCSLSASSGATNCYIRSREECGRNACIENPWYIGRARALPYLEGRKPLGSRYVNP*
Ga0126381_1001284435	3300010376	Tropical Forest Soil	MKLFTSATLAIVASLAFGAAPSKAQYAAQLYPYCSISSSSGATNCYIRSRDECGDTCISNPWYLGAQRARPYLEGRRTLAPRYVP*
Ga0126381_1009548173	3300010376	Tropical Forest Soil	MRFFSMILLAASALTFGARPSAAQYAAQLYPYCALSASSGATNCYIRSRAECGRNACIENPWYIGRVRASPYLEGRKPLEPHYVRP*
Ga0126381_1025458291	3300010376	Tropical Forest Soil	MKLFTSATLAIVASLALGAPPSQAQYAAQLYPYCSISSSSGATNCYVRSRAECGDSCISNPWYLGAQRARPYLEGRRTLAPRYVP*
Ga0126381_1030175551	3300010376	Tropical Forest Soil	MRILLMTMAAASMLTFGAQPSEAQYAAQLYPYCSLSSSSGATNCYIRSREECGRNACIQNPWYIGRARATPYLEGRKPLEPHYVRP*
Ga0126383_128272122	3300010398	Tropical Forest Soil	MSRFAIIGLAAAALPLLGAPPSEAQYAAQLYPYCSLSSSGMTNCYLSSRAQCGRSVCISNPWYIGAERARSNLEGRKPLVPHYVRP*
Ga0126383_131096162	3300010398	Tropical Forest Soil	ILLTAAALAVLGARPGHAQYAAQLYPYCSLSASNGATNCYVGSREACGRNVCISNPWYIGRERARPYLEGRRLLEPRYGRP*
Ga0137391_102013582	3300011270	Vadose Zone Soil	MKVLPAAVLAVMAALAFGATPSQAQYAAQLYPYCSLSSSSGATTCYFRSRAECSENCISNPWYIGAQRARPYLEGRRAPVPHYVRP*
Ga0137393_100959033	3300011271	Vadose Zone Soil	MKVLPAAVLAIMAALAFGATPSQAQYAAQLYPYCSLSSSSGATTCYFRSRAECSENCISNPWYIGAQRARPYLEGRRAPVPHYVRP*
Ga0137363_108205552	3300012202	Vadose Zone Soil	MSNMNARWIRVVPVLVSAVAGVLALSAGPSQAQYAAQLYPYCALSSASGATTCYYRSRAECGSNCISNPWYLGDRRAWAYTHGGRPLEPHYVRP*
Ga0137399_105746012	3300012203	Vadose Zone Soil	MRFWVLALSTMLALLGFGTWPSEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRARPYLSGDRPLEPHYVRP*
Ga0137390_102004435	3300012363	Vadose Zone Soil	MKVLPAAVLAVMAALAFGATPSQAQYAAQLYPYCSLSSSSGATTCYFRSRAECSENCISNPWYIGAQRARPYLEGRRALVPHYVRP*
Ga0137395_111910151	3300012917	Vadose Zone Soil	MRFWVLTLSTMLTLLGFGTWPSEAQSAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRAR
Ga0137396_106209961	3300012918	Vadose Zone Soil	MRFWVLTLSTMLALLGFGTWPSEAQYAAQLYPYCKMSSSSGATTCYYRSRAECGGSCISNPWYIGPQRARPYLSGDRPLEPHYVRP*
Ga0137413_102074242	3300012924	Vadose Zone Soil	MRFWFLTLSTMLALLGFGTWPSEAQYAAQLYPYCKMSSSSGATTCYYRSRAECGGSCISNPWYIGPQRARPYLSGDRPLEPHYVRP*
Ga0137410_107790802	3300012944	Vadose Zone Soil	MNARWIRVVPVLVSAVAGVLALSAGPSQAQYAAQLYPYCALSSASGATTCYYRSRAECGSNCISNPWYLGDRRAWAYTHGGRPLEPHYVRP*
Ga0137410_110945492	3300012944	Vadose Zone Soil	MKKTELSMSRLSIIVLAAAALPLLAATPSQAQYAAQLYPYCSLSSSTGATNCYISSRAQCGRSSCISNPWYIGAERARPYLEGRKPLVPRYEKP*
Ga0137409_101245465	3300015245	Vadose Zone Soil	LRFWVLTLSTMLALLGFGTWPSEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRAR
Ga0137409_105615702	3300015245	Vadose Zone Soil	MRFCIVTLSTMVAALAFGTWPSEAQYAAQLYPYCEMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRAR
Ga0182033_102624053	3300016319	Soil	MRRFLAISIAAATLPMLAARPSEAQYAAQLYPYCSLSWSTGATNCYISSREQSGRSGCISNPWYIGPKRARSYLEARKPLEPHYVQP
Ga0182040_102119012	3300016387	Soil	MRRFLAISIAAATLPMLAARPSEAQYAAQLYPYCSLSWSTGATNCYISSREQCDRSGCNPWYIGPKRARSYLEGQKPLEPHYVQP
Ga0182037_102052293	3300016404	Soil	MRRFPAISIAAAARPSEAQYAAQLYPYCSLSSSTGATNCYISSREQSGRSGCISNPWYIGPKRARSYLEERKPLEPHYVQP
Ga0182039_101920331	3300016422	Soil	LAISIAAATLPMLAARPSEAQYAAQLYPYCSLSWSTGATNCYISSREQCDRSGCNPWYIGPKRARSYLEERKPLEPHYVQP
Ga0210400_101590983	3300021170	Soil	MRFLLPILLAVAAVPMLATRPSQAQYAAQLYPYCALSSSSGATSCYISSRDQCGRDGCISNPWYIGRERARPYLEGRKPLQPHYMRP
Ga0210400_101723472	3300021170	Soil	MRRFMAILLATAAALALGGRPSEAQYAAQLYPYCALSSSSGATSCYIRSREECGRDPCIENPWYIGRKRALPYLEGRRSLEPHYVQP
Ga0210400_113964212	3300021170	Soil	SSRSGLLMYDGAFSMRFLLPLLLAVAAVPMLATRSSRAQYAAQLYPYCALSSSTGATSCYVSSRDQCERDGCISNPWYIGRERARPYLEGRKPLQPHYVRP
Ga0210400_116785422	3300021170	Soil	MRRFMAILLVTTAAVASGARPSEAQYAAQLYPYCVLSSSSGATSCYISSREECGRDPCIKNPWYIGAERASPYLEGRKSMVPHYVRP
Ga0210396_108932342	3300021180	Soil	LALGGRPSEAQYAAQLYPYCSLSSSSGATSCYIRSREECGRDPCIENPWYIGRKRALPYLEGRRSLEPHYVQP
Ga0210397_101374763	3300021403	Soil	MSRMSIIMLAAAALPLLAATPSQAQYAAQLYPYCSLSSSSGATNCYVSSRAQCGRGGCISNPWYIGAERARPYLEGRKPLVPRYVEP
Ga0210383_101680292	3300021407	Soil	MRLFIAILLAAAAVLSFGARPSKAQYAAQLYPYCSLSSSTGAMSCYVSSRQQCGSSCISNPWYIGRQRALPYREGRKQAVPRYVRP
Ga0210392_103074012	3300021475	Soil	MSRLSIIVLAAAALPLLAATPSQAQYAAQLYPYCSLSSSSGATNCYVSSRAQCGRGGCISNPWYIGAERARPYLEGRKPLVPRYVEP
Ga0210392_105424562	3300021475	Soil	MRMMLIALLAAGAVSFGVRPGAAQYAAQLYPYCSLSPSSGATSCYVASRQQCHGSCISNPWYIGARRAAPYLEGRRALEPHYVQP
Ga0126371_100136222	3300021560	Tropical Forest Soil	MKLFTSATLAIVASLAFGAAPSKAQYAAQLYPYCSISSSSGATNCYIRSRDECGDTCISNPWYLGAQRARPYLEGRRTLAPRYVP
Ga0126371_100143986	3300021560	Tropical Forest Soil	MRILLMTMAAASILTFGAQQSEAQYAAQLYPYCSLSSSSGATNCYIRSREECGRNACIQNPWYIGRARATPYLDGRKPLEPHYVRP
Ga0126371_100448047	3300021560	Tropical Forest Soil	MRLFLSTLIASATLSMLAARPIEAQYAAQLYPYCSLSSSTGATNCYISSREQCGRSGCISNPWYIGPERARPYLEGRKSPEPHYVQP
Ga0126371_114278512	3300021560	Tropical Forest Soil	MRRFLAIPIAAATLPMLAARPSEAQYAAPLYPHCSLSSSTGATNCYISSREQCGRSGCISNPWYIGPKRARSYLEGRKPLEPHYVQP
Ga0212123_102174951	3300022557	Iron-Sulfur Acid Spring	MRRFMAILVATAAILASGARPSEAQYAAQLYPYCVLSSSSGATSCYISSREECGRDPCIKNPWYIGRERALPYLEGRKSMVPHYVRP
Ga0137417_12564362	3300024330	Vadose Zone Soil	MRFWVLALSTMLALLGFGTWPSEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRARPYLSGDRPLEPHYVRP
Ga0207693_108186762	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MRYVLPILLAAAAVPMLATQPSQAQYAAQLYPYCSLSSSTGATNCYISSRAQCGRGGCISNPWYIGHDRARPYLEG
Ga0179587_106078261	3300026557	Vadose Zone Soil	LRFWVLTLSTMLALLGFGTWPSEAQYAAQLYPYCKMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRARPYLSGDRPLEPHYVRP
Ga0208997_10172412	3300027181	Forest Soil	MRFWVLTLSTMLALLGFGTWPSEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRARPYLRGDRPLEPRYERP
Ga0207780_10838411	3300027313	Tropical Forest Soil	MRFVLAMLLVAPALTLGARPSQAQYAAQLYPYCALSASSGATNCYIRSREECGRNACIENPWYIGRARALPYREGRRALAPHYVQP
Ga0208983_10233162	3300027381	Forest Soil	LRFWVLTLSTMLALLGFGTWPSEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRARPYLRGDRPLEPHYVRP
Ga0208984_10019203	3300027546	Forest Soil	MRFWVLTLSTMLALLGFGTWPSEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRARPYLRGDRPLEPHYVRP
Ga0208988_10859372	3300027633	Forest Soil	LRFWVLTLSTMLALLGFGTWPSEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRARPYLRGDRPLEPRYERP
Ga0208990_10226481	3300027663	Forest Soil	MRFWVLTLSTILALLGFGTWPTEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRARPYLRGDRPLEPRYVRP
Ga0209009_11299151	3300027667	Forest Soil	MRRFMAILLATAAALAWGGRPSEAQYAAQLYPYCSLSSSSGATNCYIRSREECGRDACIKNPWYIGRERASPYLEGRKSMEPHYVRP
Ga0208981_10001332	3300027669	Forest Soil	MRFWVLTLSTMLALLGFGTWPSEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRARPYLRGDRPLEPRYVRP
Ga0209274_101418931	3300027853	Soil	MRLFPAILLAAAAVLWFGAPSSKAQYAAQLYPYCSLSSSSGAMSCYVSSREQCGSSCISNPWYIGRQRALPYLQGRKQAVPRYVRP
Ga0209590_109555712	3300027882	Vadose Zone Soil	MRFCMAAMLAIVATLAFGARPSQAQYAAQLYPYCALSSSSGATTCYYRSRAECGSNCISNPWYIGAQRAQPYLEGRRALVPHYVRP
Ga0209488_109470572	3300027903	Vadose Zone Soil	MRFCIVTLSAIVAALAFGTRTSQAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRARPYLDGRRALEPRYVRP
Ga0209488_110197021	3300027903	Vadose Zone Soil	MSNMNARWIRVVPVLVSAVAGVLALSAGPSQAQYAAQLYPYCALSSASGATTCYYRSRAECGSNCISNPWYLGDRRAWAYTHGGRPLEPHYVRP
Ga0209006_1000048621	3300027908	Forest Soil	MRLFIAILLTAAAVLSFGARPSKAQYAAQLYPYCSLSSSTGAMSCYVSSRQQCGSSCISNPWYIGRQRALPYREGRKQAVPRYVRP
Ga0209006_1000232414	3300027908	Forest Soil	MRRFMAILLATAAALAWGGRPSEAQYAAQLYPYCSLSSSSGATNCYIRSREECGRDACIKNPWYIGQERASPYLEGRKSMEPHYVRP
Ga0170834_1079663061	3300031057	Forest Soil	RWSFFMRFLLPILLAVAAVPMLATRPSQAQYAAQLYPYCALSSSSGATSCYISSRDQCERDGCISNPWYIGRERARPYLEGRKPLQPHYVRP
Ga0170824_1106476961	3300031231	Forest Soil	MSRLSIIVLAAAALPLLAATPSRAQYAAQLYPYCSLSSSTGATNCYISSRAQCGRSSCISNPWYIGAERARPYLEGRKALEPHYVQP
Ga0170824_1145370981	3300031231	Forest Soil	TQDGNGNGSIRRQVLECMAGRFLLPILLAVAAVPMLATRPSQAQYAAQLYPYCALSSSSGATSCYISSRDQCERDGCISNPWYIGRERARPYLEGRKPLQPHYVRP
Ga0310686_1198887771	3300031708	Soil	MRLFIAILLTAAAVLSFGARPSKAQYAAQLYPYCSLSSSTGAMSCYVSSRQQCGSSCISNPWYIGRQRPLPYREGRKQAVPRYVRP
Ga0307474_103184562	3300031718	Hardwood Forest Soil	MRQLMAILLATAAVLALSGRPSEAQYAAQLYPYCSLSSSSGATSCYIRSRDECGRDPCIKNPWYIGRERALPYLEGRKSMEPHYVRP
Ga0306917_106434982	3300031719	Soil	MRRFLAISIAAATLPMLAARPSEAQYAAQLYPYCSLSWSTGATNCYISSREQCDRSGCNPWYIGPKRARSYLEGRKPLEPHYVQP
Ga0306918_111829992	3300031744	Soil	MRRLPAISIAAATLPMLAARPSEAQYAAQLYPYCSLSWSTGATNCYISSREQCDRSGCNPWYIGPKRARSYLEERKPLEPH
Ga0318523_102179052	3300031798	Soil	AAATLPMLAARPSEAQYAAQLYPYCSLSWSTGATNCYISSREQCDRSGCNPWYIGPKRARSYLEERKPLEPHYVQP
Ga0310917_108161912	3300031833	Soil	MRRFLAISIAAATLPMLAARPSEAQYAAQLYPYCSLSWSTGATNCYISSREQCDRSGCNPWYIGPKRARSYLEERKPLEPHYVQP
Ga0306925_121090891	3300031890	Soil	MRLALTILLAMAALPMFGAPPGTAQYAAQLYPYCALSASSGATSCYIRSREECGRDACIANPWYIGRERARPYREGRRPLAPHYVRP
Ga0306923_104633092	3300031910	Soil	MRRLPAISIAAATLPMLAARPSEAQYAAQLYPYCSLSLDHRCDQLLYQLARAMGRSGCISNPRYIGPKRARSYLEGQKPLEPHYVQP
Ga0306923_121816961	3300031910	Soil	LPMFGAPPGTAQYAAQLYPYCALSASSGATSCYIRSREECGRDACIANPWYIGRERARPYREGRRPLAPHYVRP
Ga0306921_119103611	3300031912	Soil	MRRFLAISIAAATLPMLAARPSEAQYAAQLYPYCSLSWSTGATNCYISSREQCDRSGCNPWYIGPKRARSYLEARKPLEPHYVQP
Ga0306926_102607681	3300031954	Soil	MRRFLAISIAAAARPSEAQYAAQLYPYCSLSSSTGATNCYISSREQSGRSGCISNPWYIGPKRARSYLEGRKPLEPHYVQP
Ga0306924_102223583	3300032076	Soil	RFLAISIAAATLPMLAARPSEAQYAAQLYPYCSLSWSTGATNCYISSREQCDRSGCNPWYIGPKRARSYLEERKPLEPHYVQP
Ga0307470_105073722	3300032174	Hardwood Forest Soil	MRMFMAILAATAAALALGGRPSEAQYAAQLYPYCSLSSSSGATNCYIRSREECGRDACISNPWYIGRERASPYLEGRKSLEPHYVRP
Ga0307470_114852281	3300032174	Hardwood Forest Soil	MRFLFPLLLAVAAVPLLATRPSQAQYAAQLYPYCALSSSTGATSCYISSRDQCERDGCISNPWYIGRERARPYLEGRKPLQPHYVPP
Ga0307472_1000588622	3300032205	Hardwood Forest Soil	MRFWMLILSAIATSLAFGVQPSEAQYAAQLYPYCKMSSSSGATSCYYRSRAECGGSCISNPWYIGAQRAQPYLDGRRALVPRYERP
Ga0307472_1012607822	3300032205	Hardwood Forest Soil	MSRISIMVLAAAALPLLAATPSRAQYAAQLYPYCSLSSSTGATNCYISSRAQCGRSSCISNPWYIGAQRARPYLEGRKELVPHYVKP
Ga0335081_114781461	3300032892	Soil	MRIFVAMLLATAALTLGARPSEAQYAAQLYPYCSLSASSGATNCYIRSREECGRNACIQNPWYIGRARAMPYIEGRKPLEPHYVRP
Ga0335084_120951561	3300033004	Soil	PAARAAYFAVITSARRTPPMRLSLTMLLALAALAIVGAQPSAAQYAAQLYPYCSLGAGTGATNCYIGSREECGRNVCISNPWYIGRERARPYLEGRKPLVPCYVRP
Ga0310914_108489651	3300033289	Soil	MRRFLAISIAAAARPSEAQYAAQLYPYCSLSSSTGATNCYISSREQSGRSGCISNPWYIGPKRARSYLEARKPLEPHYVQP
Ga0372946_0285389_32_292	3300034384	Soil	MRFWVLTLSTMLALLGFETWPSEAQYAAQLYPYCAMSSSSGATSCYYRSRAECGGSCISNPWYIGPQRARPYLRGDRPLEPRYERP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055125

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences