Metagenome / Metatranscriptome Family F055146

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055146
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	72 residues
Representative Sequence	MSNLTFFIVLAGLLLFTGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLLKGL
Number of Associated Samples	80
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	74.64 %
% of genes near scaffold ends (potentially truncated)	71.94 %
% of genes from short scaffolds (< 2000 bps)	87.05 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (56.835 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (31.655 % of family members)
Environment Ontology (ENVO)	Unclassified (46.043 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.590 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 51.02% β-sheet: 0.00% Coil/Unstructured: 48.98%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF04392	ABC_sub_bind	5.76
PF03466	LysR_substrate	5.76
PF13676	TIR_2	4.32
PF09699	Paired_CXXCH_1	2.88
PF04324	Fer2_BFD	2.88
PF00872	Transposase_mut	2.88
PF00126	HTH_1	2.88
PF09339	HTH_IclR	1.44
PF13432	TPR_16	1.44
PF01068	DNA_ligase_A_M	1.44
PF05656	DUF805	1.44
PF03401	TctC	0.72
PF14537	Cytochrom_c3_2	0.72
PF01963	TraB_PrgY_gumN	0.72
PF12002	MgsA_C	0.72
PF04542	Sigma70_r2	0.72
PF06568	DUF1127	0.72
PF00753	Lactamase_B	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	5.76
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	2.88
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	1.44
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.44
COG3152	Uncharacterized membrane protein YhaH, DUF805 family	Function unknown [S]	1.44
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.72
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.72
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.72
COG1916	Pheromone shutdown protein TraB, contains GTxH motif (function unknown)	Function unknown [S]	0.72
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.72
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.72
COG5457	Uncharacterized conserved protein YjiS, DUF1127 family	Function unknown [S]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
All Organisms	root	All Organisms	43.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
cellular organisms	root	All Organisms → cellular organisms	43.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.17 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	33.81 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	2.16 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	29.50 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	2.16 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10.79 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.47 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	2.16 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.47 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2.88 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	2.16 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	1.44 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.72 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.72 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.47 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.88 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	2.16 %
Beijerinckia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia	0.72 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.72 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.72 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.47 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.88 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	2.16 %
unclassified Beijerinckia	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia	0.72 %
Sphingobium subterraneum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium subterraneum	0.72 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	0.72 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.47 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.88 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	2.16 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.72 %
Beijerinckia sp. 28-YEA-48	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp. 28-YEA-48	0.72 %
Sphingobium subterraneum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium subterraneum	0.72 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.83 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.47 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.88 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	2.16 %
Pseudonocardia sp. S2-4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. S2-4	0.72 %
Beijerinckia sp. 28-YEA-48	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp. 28-YEA-48	0.72 %
Sphingobium subterraneum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium subterraneum	0.72 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY02G69QX	Not Available	522	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101782215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	608	Open in IMG/M
3300000580\|AF_2010_repII_A01DRAFT_1018195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Beijerinckia → unclassified Beijerinckia → Beijerinckia sp. 28-YEA-48	1122	Open in IMG/M
3300000597\|AF_2010_repII_A1DRAFT_10139016	Not Available	588	Open in IMG/M
3300000651\|AP72_2010_repI_A10DRAFT_1032813	Not Available	669	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1089208	Not Available	541	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1035668	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	781	Open in IMG/M
3300000893\|AP72_2010_repI_A001DRAFT_1047073	Not Available	674	Open in IMG/M
3300000955\|JGI1027J12803_100181189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	730	Open in IMG/M
3300005332\|Ga0066388_101520229	All Organisms → cellular organisms → Bacteria → Proteobacteria	1172	Open in IMG/M
3300005332\|Ga0066388_102330979	Not Available	969	Open in IMG/M
3300005332\|Ga0066388_103023019	Not Available	859	Open in IMG/M
3300005332\|Ga0066388_103791446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	771	Open in IMG/M
3300005332\|Ga0066388_104542280	Not Available	707	Open in IMG/M
3300005332\|Ga0066388_105798257	Not Available	625	Open in IMG/M
3300005363\|Ga0008090_15499266	Not Available	626	Open in IMG/M
3300005363\|Ga0008090_15689106	Not Available	540	Open in IMG/M
3300005471\|Ga0070698_100889023	Not Available	836	Open in IMG/M
3300005713\|Ga0066905_100738280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → Sphingobium subterraneum	848	Open in IMG/M
3300005713\|Ga0066905_100865053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	788	Open in IMG/M
3300005713\|Ga0066905_101114419	Not Available	701	Open in IMG/M
3300005713\|Ga0066905_101702233	Not Available	579	Open in IMG/M
3300005764\|Ga0066903_102422185	All Organisms → cellular organisms → Bacteria → Proteobacteria	1015	Open in IMG/M
3300005764\|Ga0066903_103054739	Not Available	906	Open in IMG/M
3300005764\|Ga0066903_104945356	Not Available	707	Open in IMG/M
3300005764\|Ga0066903_105460760	All Organisms → cellular organisms → Bacteria	670	Open in IMG/M
3300005764\|Ga0066903_107317927	Not Available	571	Open in IMG/M
3300005764\|Ga0066903_108097720	Not Available	539	Open in IMG/M
3300005764\|Ga0066903_108909780	Not Available	509	Open in IMG/M
3300006173\|Ga0070716_100047148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2429	Open in IMG/M
3300006854\|Ga0075425_102417069	Not Available	583	Open in IMG/M
3300006934\|Ga0080680_1227109	Not Available	539	Open in IMG/M
3300006938\|Ga0081245_1486796	Not Available	772	Open in IMG/M
3300010046\|Ga0126384_10100172	All Organisms → cellular organisms → Bacteria → Proteobacteria	2136	Open in IMG/M
3300010046\|Ga0126384_10492720	Not Available	1055	Open in IMG/M
3300010046\|Ga0126384_10789353	Not Available	849	Open in IMG/M
3300010046\|Ga0126384_10801451	Not Available	843	Open in IMG/M
3300010046\|Ga0126384_11659458	Not Available	603	Open in IMG/M
3300010047\|Ga0126382_10248449	Not Available	1302	Open in IMG/M
3300010047\|Ga0126382_12031924	Not Available	548	Open in IMG/M
3300010047\|Ga0126382_12123114	Not Available	538	Open in IMG/M
3300010047\|Ga0126382_12494726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	504	Open in IMG/M
3300010048\|Ga0126373_11714016	Not Available	692	Open in IMG/M
3300010358\|Ga0126370_10311054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1254	Open in IMG/M
3300010358\|Ga0126370_11018201	Not Available	757	Open in IMG/M
3300010359\|Ga0126376_10784587	All Organisms → cellular organisms → Bacteria → Proteobacteria	928	Open in IMG/M
3300010359\|Ga0126376_12371080	Not Available	577	Open in IMG/M
3300010359\|Ga0126376_13014004	Not Available	520	Open in IMG/M
3300010360\|Ga0126372_11053986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	828	Open in IMG/M
3300010360\|Ga0126372_13040420	Not Available	520	Open in IMG/M
3300010361\|Ga0126378_10448319	Not Available	1404	Open in IMG/M
3300010361\|Ga0126378_10516337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1310	Open in IMG/M
3300010361\|Ga0126378_10567444	All Organisms → cellular organisms → Bacteria → Proteobacteria	1249	Open in IMG/M
3300010362\|Ga0126377_10660078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1095	Open in IMG/M
3300010362\|Ga0126377_12132465	Not Available	637	Open in IMG/M
3300010366\|Ga0126379_10436767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1367	Open in IMG/M
3300010376\|Ga0126381_104834351	Not Available	518	Open in IMG/M
3300010398\|Ga0126383_12930137	Not Available	557	Open in IMG/M
3300010398\|Ga0126383_13125805	Not Available	541	Open in IMG/M
3300010398\|Ga0126383_13675915	Not Available	501	Open in IMG/M
3300010863\|Ga0124850_1009560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3073	Open in IMG/M
3300010868\|Ga0124844_1065449	Not Available	1324	Open in IMG/M
3300012206\|Ga0137380_10914820	Not Available	753	Open in IMG/M
3300012958\|Ga0164299_11521842	Not Available	523	Open in IMG/M
3300012971\|Ga0126369_10431708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1362	Open in IMG/M
3300012971\|Ga0126369_12029552	Not Available	663	Open in IMG/M
3300012984\|Ga0164309_11335164	Not Available	608	Open in IMG/M
3300016270\|Ga0182036_10010261	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4947	Open in IMG/M
3300016270\|Ga0182036_10141962	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1698	Open in IMG/M
3300016270\|Ga0182036_10169090	All Organisms → cellular organisms → Bacteria	1574	Open in IMG/M
3300016270\|Ga0182036_10182986	Not Available	1521	Open in IMG/M
3300016294\|Ga0182041_10072793	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2424	Open in IMG/M
3300016294\|Ga0182041_12336027	Not Available	500	Open in IMG/M
3300016341\|Ga0182035_10798038	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300016371\|Ga0182034_10079928	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2275	Open in IMG/M
3300016371\|Ga0182034_10199166	All Organisms → cellular organisms → Bacteria	1547	Open in IMG/M
3300016371\|Ga0182034_11769507	Not Available	544	Open in IMG/M
3300016387\|Ga0182040_10482635	All Organisms → cellular organisms → Bacteria	987	Open in IMG/M
3300016445\|Ga0182038_11359935	Not Available	636	Open in IMG/M
3300018072\|Ga0184635_10201815	Not Available	792	Open in IMG/M
3300018074\|Ga0184640_10489014	Not Available	543	Open in IMG/M
3300021377\|Ga0213874_10161673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	787	Open in IMG/M
3300021560\|Ga0126371_12034434	Not Available	691	Open in IMG/M
3300021560\|Ga0126371_12630199	Not Available	610	Open in IMG/M
3300027654\|Ga0209799_1038375	Not Available	1067	Open in IMG/M
3300027874\|Ga0209465_10188827	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1028	Open in IMG/M
3300031546\|Ga0318538_10003442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5687	Open in IMG/M
3300031546\|Ga0318538_10302216	Not Available	862	Open in IMG/M
3300031549\|Ga0318571_10198362	Not Available	717	Open in IMG/M
3300031573\|Ga0310915_10011548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5144	Open in IMG/M
3300031573\|Ga0310915_10037311	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	3074	Open in IMG/M
3300031573\|Ga0310915_11268526	Not Available	508	Open in IMG/M
3300031680\|Ga0318574_10082411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1756	Open in IMG/M
3300031681\|Ga0318572_10395143	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	822	Open in IMG/M
3300031681\|Ga0318572_10875526	Not Available	533	Open in IMG/M
3300031682\|Ga0318560_10273342	Not Available	909	Open in IMG/M
3300031682\|Ga0318560_10359074	Not Available	787	Open in IMG/M
3300031713\|Ga0318496_10237808	Not Available	1003	Open in IMG/M
3300031719\|Ga0306917_10035973	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3230	Open in IMG/M
3300031719\|Ga0306917_10192295	Not Available	1540	Open in IMG/M
3300031747\|Ga0318502_10068652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1907	Open in IMG/M
3300031747\|Ga0318502_10225954	Not Available	1088	Open in IMG/M
3300031751\|Ga0318494_10936363	Not Available	508	Open in IMG/M
3300031768\|Ga0318509_10025820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. S2-4	2810	Open in IMG/M
3300031768\|Ga0318509_10281187	Not Available	930	Open in IMG/M
3300031768\|Ga0318509_10792001	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	524	Open in IMG/M
3300031768\|Ga0318509_10853914	Not Available	503	Open in IMG/M
3300031780\|Ga0318508_1029021	All Organisms → cellular organisms → Bacteria	1393	Open in IMG/M
3300031781\|Ga0318547_10246200	All Organisms → cellular organisms → Bacteria	1077	Open in IMG/M
3300031793\|Ga0318548_10012149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3420	Open in IMG/M
3300031793\|Ga0318548_10393373	Not Available	680	Open in IMG/M
3300031795\|Ga0318557_10221760	Not Available	864	Open in IMG/M
3300031796\|Ga0318576_10074864	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1511	Open in IMG/M
3300031798\|Ga0318523_10194229	All Organisms → cellular organisms → Bacteria	1013	Open in IMG/M
3300031805\|Ga0318497_10449917	Not Available	721	Open in IMG/M
3300031833\|Ga0310917_10018392	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	3979	Open in IMG/M
3300031833\|Ga0310917_11118250	Not Available	525	Open in IMG/M
3300031835\|Ga0318517_10101530	Not Available	1263	Open in IMG/M
3300031846\|Ga0318512_10165263	All Organisms → cellular organisms → Bacteria	1073	Open in IMG/M
3300031880\|Ga0318544_10241347	Not Available	699	Open in IMG/M
3300031890\|Ga0306925_10383971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1506	Open in IMG/M
3300031890\|Ga0306925_11627974	Not Available	626	Open in IMG/M
3300031894\|Ga0318522_10118441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	989	Open in IMG/M
3300031912\|Ga0306921_10120971	Not Available	3050	Open in IMG/M
3300031912\|Ga0306921_10674003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1190	Open in IMG/M
3300031941\|Ga0310912_10018626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4553	Open in IMG/M
3300031941\|Ga0310912_10047360	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	3007	Open in IMG/M
3300031942\|Ga0310916_10663620	Not Available	884	Open in IMG/M
3300031942\|Ga0310916_11097104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	661	Open in IMG/M
3300031946\|Ga0310910_10260224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1359	Open in IMG/M
3300031981\|Ga0318531_10185970	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	935	Open in IMG/M
3300032042\|Ga0318545_10163247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	793	Open in IMG/M
3300032042\|Ga0318545_10330671	Not Available	548	Open in IMG/M
3300032054\|Ga0318570_10083579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1375	Open in IMG/M
3300032180\|Ga0307471_101805694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	763	Open in IMG/M
3300032261\|Ga0306920_100155835	Not Available	3405	Open in IMG/M
3300032261\|Ga0306920_102321991	Not Available	742	Open in IMG/M
3300033290\|Ga0318519_10144036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1326	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.56%
Host-Associated	Host-Associated	1.44%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.12%
Aquatic	Environmental → Aquatic	1.44%
Plants	Host-Associated → Plants	1.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.12%
Sediment	Environmental → Aquatic → Sediment	1.44%
Roots	Host-Associated → Plants → Roots	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	80.58%
Loam	Environmental → Terrestrial → Soil → Loam	16.55%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.44%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	51.08%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	15.11%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	2.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.16%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.44%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	31.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	22.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	15.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.32%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	2.88%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.44%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.72%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000580	Forest soil microbial communities from Amazon forest - 2010 replicate II A01	Environmental	Open in IMG/M
3300000597	Forest soil microbial communities from Amazon forest - 2010 replicate II A1	Environmental	Open in IMG/M
3300000651	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A10	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006934	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A1 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300006938	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A001 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300010868	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (PacBio error correction)	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027654	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_04931890	2170459010	Grass Soil	MSKLTSFVTLAGLLFFPGPAPAGDTEPIASLCARRDLQAFREAREEITVRDIAAATGIEESALRQLLKGVAKEGEIMCGRQ
INPhiseqgaiiFebDRAFT_1017822152	3300000364	Soil	MSNLTSFIVLAGLLFFPGPAPADEVGSIAALCARRDXQAVREAQXEMTVRDTXAATGIKESTLRQLLKGLGKEGEIRCGR*
AF_2010_repII_A01DRAFT_10181952	3300000580	Forest Soil	MSNLTYFIVLAGLLLFPGPAPAAETEPIAALCARPRLLREAQEEMTVRDTAAATGIKENTLRQLLKGLARNGGMCGG*
AF_2010_repII_A1DRAFT_101390161	3300000597	Forest Soil	MXNFSFFIVLAGLLLLPGPTPAAETEPIAASCARPRLLREAQEEMTVRDAAVATGIKESTLRQLLRGLPKEGRTCGE*
AP72_2010_repI_A10DRAFT_10328131	3300000651	Forest Soil	MSNLSFFIVLAGLLLFPGPTPAAETEPIAALCARPGLQALRAAQEEMTVRDTAAATGIKESSLRQLLRGLPKEGRMCGE*
AF_2010_repII_A100DRAFT_10892081	3300000655	Forest Soil	MSNLSFFIVLAGLLLFPGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTATDTGIKESTLRQLLKGLPREGRMCGE*
AP72_2010_repI_A001DRAFT_10356682	3300000893	Forest Soil	LIQGNKMSNLSFFIVLAGLLLFPGPTPAAETEPIAALCARPGLQALRAAQEEMTVRDTAAATGIKESSLRQLLRGLPKEGRMCGE*
AP72_2010_repI_A001DRAFT_10470731	3300000893	Forest Soil	MSNLTSFIVLAGLLLFPGPAPAAETEPIAALCARRDLQALREAQEEMTVRDTAAATRIKESTLRQLLKGLAKEGDIRCGG*
JGI1027J12803_1001811891	3300000955	Soil	MSKLTSFIALAGLLFFPGPALPAAATEPIAALCARRDFQALREAHEEMTVRDIAAATGIKESALRQLLKGVA
Ga0066388_1015202292	3300005332	Tropical Forest Soil	MVELTSPGECCLSKGDKMSNLTSFIVLAGLLFFPGPAPADEAAALCARRDLQALREAQEEMTVRDTAAATRIKESTLRQLLRGLPKEGRTCGE*
Ga0066388_1023309791	3300005332	Tropical Forest Soil	MSKLSFFIVLAGLLLFPGPTPAAETDPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLLKGL
Ga0066388_1030230191	3300005332	Tropical Forest Soil	MSNLTSLVVLAGLLFFPGPAPAEAESIAALCARRNLQAVWEAQQEMTVRDTAAATGIKESTLRQLLKGLGKEEGMR*
Ga0066388_1037914463	3300005332	Tropical Forest Soil	LFPDPTPAAETEPITALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLLKGFPKEGRMCGE*
Ga0066388_1045422802	3300005332	Tropical Forest Soil	MSNLTFFIVLAGLLLFPGPAPAGEREPVEALCARPGLQALTEAQEEKTVRDAAAAIGIKESTLRQLLKGLPKEGRMCGG*
Ga0066388_1057982572	3300005332	Tropical Forest Soil	MSNLTSFILLAGLLFFPGPAPANEAGSIAALCARRELQAVRKAQQEMTVRDTAAATGIKESTLRQLLK
Ga0008090_154992661	3300005363	Tropical Rainforest Soil	MSNLTSFIVLAGLLLFPGPTPAAETEPIAALCARRDLQALREAQEEMTVRDTAAATRIKESTLRQLLKGLAKEGDIRCGG*
Ga0008090_156891061	3300005363	Tropical Rainforest Soil	MFNPSFFIVFAGFLLFSGPTPAAAETKPIAALCARPGLQALREAQEENTVRDTAAATGIKESSLRQLLKRLPKEARTCGE*
Ga0070698_1008890232	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSNLSFFIVLAGLLLFPDPTPAAETEPITALCARPGLQALREAQEEMTVRDTAAAIGIKESTLRQLLKGLPKEGRMCGG*
Ga0066905_1007382802	3300005713	Tropical Forest Soil	MSNLTSFIVLAGLLFFPGPAPAAEAESIAALCARRDLQGVREAQQEMTVRDTAAATGIKESMLRQLLKGLGKEGEIRCGG*
Ga0066905_1008650532	3300005713	Tropical Forest Soil	MSNLTSSIILAGLLFFPVPAPADGAEPIAALCARRDLQALREAQEEMTVRDTAAATGIKEST
Ga0066905_1011144191	3300005713	Tropical Forest Soil	MSNLTLFIVLAGLLLFPGPAPAAETEPIAALCARRDLQAVREAQEEMTVRDTAAATGIKESTLRPLLKRLAKEGGMCGR*
Ga0066905_1017022331	3300005713	Tropical Forest Soil	MSNLSFFIVLAGLLLFPGPTPAAETDPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLLKGL
Ga0066903_1024221854	3300005764	Tropical Forest Soil	MSNLTSFIVLASLLFFSGPAPAAEAESIAALCARRDLQAAREAQQEMTVRDTAAATGIKESTLRQLLKGLGKEGEIRCGG*
Ga0066903_1030547392	3300005764	Tropical Forest Soil	MSNLSFFIVVAGLLLFPDPTPAAEMEPITALCARPGLQARREAQEEMTVRDTAAATGIKESTLRQLLKGLPKEGRMCGE*
Ga0066903_1049453563	3300005764	Tropical Forest Soil	MGGPIYLEPETTQVALDHRLLIQGNKMSNLAFFIVLAGLLLFPGPTPAAETGPIAALCARPGLQALRGAQEEMTVRDTAAATGIKESTLR
Ga0066903_1054607602	3300005764	Tropical Forest Soil	MSNPTFFIILAGILFFPSPVPAAEREPLAALCARRDVQELKKAQQEMTVRDVAAATGINESTLRQLLKGSAKEGGISCP*
Ga0066903_1073179271	3300005764	Tropical Forest Soil	MSNLSFFIVLAGLLLFPGPAPAAETEPVAALCARPGFQALRRAQEEMTVRDTADATGIKESTLRQL
Ga0066903_1080977202	3300005764	Tropical Forest Soil	VEPETTVALENHRQLIRGNKMSNLSFFIVLAGLLLFPGPTPAAVREPEPIVASCARPGLQARREAQEEMTVRDVATATGIKESTLRQLLKGLPKEGRMCGE*
Ga0066903_1089097801	3300005764	Tropical Forest Soil	FFIVLAGLLLFPGPTPAAETEPTAALCARPGLQVLREAQREMTVRDTAAATGIKESTLRQLLKGLPKEGRMCGD*
Ga0070716_1000471481	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MSNLSFFIVLAGLLLFPGPAGAADTEPIAALCARRNLQALREAQEEMTVRDTAAATGIKESTLRQLLLKGLAKEGGIKCGG
Ga0075425_1024170692	3300006854	Populus Rhizosphere	PSRVGLNHRLLIQGNKMSNLSFFIVLAGLLLFPDPTPAAETEPITALCARPGLQALREAQEEMTVRDTAAATGIKESALRQLLKGLPKEGRMCGE*
Ga0080680_12271091	3300006934	Tropical Rainforest Soil	PSRVGLNHRLLFQGNKMFNLSFFIVLAGFLLFSGPTPAAETKPIAALCARPGLQALREAQEENTVRDTAAATGIKESSLRQLLKRLPKEARTCGE*
Ga0081245_14867961	3300006938	Tropical Rainforest Soil	MSNLTYFIVLAGLLLFPGPAPAAETEPIAALCARPRLLREAQEEMTVRDTAAATGIKESTLRQLLRGLPKEGRASGE*
Ga0126384_101001723	3300010046	Tropical Forest Soil	MSNLTSSIILAGLLFFPVPAPADEVEPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLLKGLPK
Ga0126384_104927201	3300010046	Tropical Forest Soil	MSNLTSFIVLAGLLFFPGPAPADEAESIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLLKGLPK
Ga0126384_107893532	3300010046	Tropical Forest Soil	MIVQGDKMSTLTFFIVLAGLLFFPSPLPAGERDEPIAALCARRNLQALREAQEEMTVRDIAAATGIKE
Ga0126384_108014511	3300010046	Tropical Forest Soil	GNKMSNFTFFIVLAGLLLFPGPTPAAETEPTAALCARPGLQVLREAQREMTVRDTAAATGIKESTLRQFLKGLPQEGKMCGD*
Ga0126384_116594581	3300010046	Tropical Forest Soil	MIVQGNKMSKLTFFIVLAGLLFFPGPLPAGERDEPIAALCARRDLQALREAQEEMTVRDTAAATGIKEITLRQLLLKGLAREGGIRCGG*
Ga0126382_102484493	3300010047	Tropical Forest Soil	MSNLTSFIVLAGLLFFPGPAPAAEAESIAALCARRDLQGVREAQQEMTVRDTAAATGIKESMLRQLLK
Ga0126382_120319242	3300010047	Tropical Forest Soil	MSNLSFFIVLAGLLLFPGPAPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKE
Ga0126382_121231141	3300010047	Tropical Forest Soil	MSNLSFFIVLAGLLLFPDPTPAAETEPITALCARPGLQALREAQEEMTVRDTAAATGIKEST
Ga0126382_124947262	3300010047	Tropical Forest Soil	MSNLTSSIILAGLLFFPDPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTPRQLLKWVPKEGRMCGE*
Ga0126373_117140163	3300010048	Tropical Forest Soil	PTPAAKTEPTAALCARPGLQALRAAQEEMTVRDTAEATGIKESSLRQLLKGVPKRMCGD*
Ga0126370_103110541	3300010358	Tropical Forest Soil	MSNLTSSIILAGLLFFPVPAPADEVEPIAALCARPGLQALREAQEEMTVRDTAAAT
Ga0126370_110182011	3300010358	Tropical Forest Soil	MSNLSFFIVLAGLLLLPGPTPAAETEPIAASCARPRLQALRAAQEEMTVRDTAEATGIKESSLRQLLKGLPKRMCGD*
Ga0126376_107845873	3300010359	Tropical Forest Soil	MSNLTSLVVLAGLLFFPGPAPAEAESIAALCARPGLQALRQAQEEMTVRDTAAATGIKESTLRQLLRGLPKEGRTCGE*
Ga0126376_123710802	3300010359	Tropical Forest Soil	LNHRLLIQGNKMSNLSFFIVLAGLLLLPGPTPAAETEPIAASCARPGLQALRAAQEEMTVRDTAEATGIKESSLRQLLKGLPKRMCGD*
Ga0126376_130140041	3300010359	Tropical Forest Soil	MSNLSFFIVLAGLLLFPDPTPAAETEPITALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQL
Ga0126372_110539862	3300010360	Tropical Forest Soil	MSNLTSSIILAGLLFFPVPAPADEVEPVAALCARPGLQALREAQEEMTVRDTAAAT
Ga0126372_130404201	3300010360	Tropical Forest Soil	NLSFFIVLAGLLLLPGPTPAAETEPIAASCARPGLQALRAAQEEMTVRDTAEATGIKESSLRQLLKGLPKRMCGD*
Ga0126378_104483193	3300010361	Tropical Forest Soil	FFIVLAGLLLLPGPTPAAETEPIAASCARPGLQALRAAQEEMTVRDTAEATGIKESSLRQLLKGLPKRMCGD*
Ga0126378_105163371	3300010361	Tropical Forest Soil	MSNLTSSIILAGLLFFPVPAPADEVEPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLLK
Ga0126378_105674442	3300010361	Tropical Forest Soil	MSNLSFFMVLAGLLLFPGPAPAAETEPIAALCARPGLQALREAQEEMTVRDTAAAIGIKESTLRQLLRGLPKEGRTCGE*
Ga0126377_106600781	3300010362	Tropical Forest Soil	MSNVTSFIVLAGLLFFPGPAPADEAAALCARRDLQAVREAQQEMTVRDTAAATGIKESTL
Ga0126377_121324651	3300010362	Tropical Forest Soil	MSNLSFFIVLAGLLLFPDPTPAAETEPITALCARLGLQALREAQEEMTVRDTAAATGIKESTLRQLLKG
Ga0126379_104367671	3300010366	Tropical Forest Soil	MSNLTSFIVLAGLLLFPGPVPGAETESIAALCARPGLQALREAQEETTVRDTAAATGINESTLRQLLKGL
Ga0126381_1048343511	3300010376	Tropical Forest Soil	DDPSRVGLNHRLLIQGNKMSNLSFFIVLAGLLLLPGPTPAAETEPIAASCARPGLQALRAAQEEMTVRDTAEATGIKESSLRQLLKGLPKRMCGD*
Ga0126383_129301372	3300010398	Tropical Forest Soil	QGNKMSNLSFFIVLAGLLLLPGPTPAAETEPIAASCARPGLQALRAAQEEMTVRDTAEATGIKESSLRQLLKGLPKRMCGD*
Ga0126383_131258052	3300010398	Tropical Forest Soil	MSNLSFFIVLAGLLLFPDPTPAAETEPITALCARPGLQALREAQEEMTVRDTAAATGIKESILRQLLKGLPKEGRMCGE*
Ga0126383_136759151	3300010398	Tropical Forest Soil	MSNLTCFVVLAGLLLFPGSAPAAETEPIAALCARPRLLREAQEEMTVRDTAAATGIKESTLRQLLK
Ga0124850_10095603	3300010863	Tropical Forest Soil	MSNLTSFIVLAGLLFFPGPAPADEAAALCARRDLQALREAQEEMTVRDTAAATRIKESTLRQLLRGLPKEGRTCGE*
Ga0124844_10654492	3300010868	Tropical Forest Soil	MSNLSFFIVLAGLLLLPGPTPAAETEPIAASCARPGLQALRAAQEEMTVRDTAEATGIKESSLRQLLKGLPKRMCGD*
Ga0137380_109148202	3300012206	Vadose Zone Soil	LAGLLFFSGPAPADEAESIAVLCARRNLQALREAQEEMTVRDTAAATGIKESTLRQLLLKGLAKEGGIRCGG*
Ga0164299_115218421	3300012958	Soil	MSKLTSFIALVGLLFFPGPAPAAETEPIAALCARRDLQALREAQEEMTVRDIAAATRIKESALRQLLKGVAKEGEIRCGR*
Ga0126369_104317082	3300012971	Tropical Forest Soil	MSNLTSFIVLAGLLFLPGPAPAGEAESIAALCARRDLQAVREAQQEMTVRDTAAATGIKE
Ga0126369_120295521	3300012971	Tropical Forest Soil	GLNHRLLIQGNKMSNLSFFIVLAGLLLLPGPTPAAETEPIAASCARPGLQALRAAQEEMTVRDTAEATGIKESSLRQLLKGLPKRMCGD*
Ga0164309_113351643	3300012984	Soil	MSKLTSFIALVGLLFFPGPAPAAETEPIAALCARRDLQALREAQEEMTVRDIAAAARIKESALRQLLKG
Ga0182036_100102617	3300016270	Soil	MSNLSFFIVLAGLLLFPDPTPAAETEPITALCGRAGLQALREAQEEMAFRDTAAATGIKESTLRQLLKGLPKEGRMCGE
Ga0182036_101419626	3300016270	Soil	MSNLTSFIVLAGLLSFPGPAPADEAESIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLL
Ga0182036_101690901	3300016270	Soil	MSNLTFFIVLAGLLLFTGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLLKG
Ga0182036_101829863	3300016270	Soil	MSNLSFFIVLAALLLFPGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLL
Ga0182041_100727931	3300016294	Soil	MSNLSFFIVLAGLLLFPDPTPAAETEPITALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLLKG
Ga0182041_123360271	3300016294	Soil	MSNRSFFIVLAGLLLFPGATPAAETDPIAALCARPGLQVLREAQEEMTVRDTAAATGIKESTLRQLL
Ga0182035_107980382	3300016341	Soil	MSNLSFFMVLAGLLLFPGPAPAAETEPIAALCARPGLQALREAQEEMKVRDAAATIGIKESTQRQLLKGLAKEGRMC
Ga0182034_100799281	3300016371	Soil	MSNFTFFIVLAGLLLFPGPTPAAEREPTAALCARPGLQVLREAQREMTVRDTAAATG
Ga0182034_101991663	3300016371	Soil	MSNLTFFIVLAGLLLFTGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKE
Ga0182034_117695072	3300016371	Soil	MSNLTFFIVLAGLLLFPGLAPAAETEPIAALCARPGFQALREAQEEMTVRDTAAATGIKE
Ga0182040_104826352	3300016387	Soil	MSNLTFFIVLAGLLLFTGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKETTLRQLLKGLPKGGRMCGE
Ga0182038_113599351	3300016445	Soil	MSNLSFFMVLAGLLLFPGPAPAAETEPIAALCARPGLQALREAQEEMTVRDTAAAIGIKEST
Ga0184635_102018152	3300018072	Groundwater Sediment	MSKLTSFVALAGLLFFPGPAPAAETDPIASLCARRDLQAFREAREEITVRDIAAATGIEESALRQLLKGVAKEGEIMCGRQ
Ga0184640_104890142	3300018074	Groundwater Sediment	MSKLTSFVALAGLLFFPGPAPAAETEPIASLCARLNLQALREAQEEMTVRDIAAATGI
Ga0213874_101616731	3300021377	Plant Roots	VLAGFLLLSGPTPAGATEPIAALCARPDVQALREAQEEMTVRDTAAATGIKESSLRKLLRGLPKEGRMCEE
Ga0126371_120344342	3300021560	Tropical Forest Soil	MSNLTYFIVLAGLLLFPGPAPAAETEPIAALCARPSLLREAQEEMTVRDTAAATEIKESTLRQLLK
Ga0126371_126301991	3300021560	Tropical Forest Soil	MSNLSFFIVLAGLLLFPGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTL
Ga0209799_10383752	3300027654	Tropical Forest Soil	MSNLSFFIVLAGLLLFPGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLR
Ga0209465_101888271	3300027874	Tropical Forest Soil	MSNLTSSIILAGLLFFPVPAPADEVEPIAALCARPGLRALREAQEEMTVRDTAAATGIKESTLRQLLK
Ga0318538_100034421	3300031546	Soil	MSNLSFFIVLAALLLFPGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKEST
Ga0318538_103022161	3300031546	Soil	MSNLSFFIVLAGLLLFPDPTPAAETEPITALCARPGLQALREAQEEMTVRDTAAATGIKESTL
Ga0318571_101983622	3300031549	Soil	MSNLSFFIVLAALLLFPGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLLK
Ga0310915_100115486	3300031573	Soil	MSNLSFFIVLAGLLLFPDPTPAAETEPITALCARPGLQALREAQEEMTVRDTAAATGIKE
Ga0310915_100373113	3300031573	Soil	MSNLSFFIVLAGLLLFPDPTPAAETEPITALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLL
Ga0310915_112685263	3300031573	Soil	NLSFFIVLAGLLLFPGPAPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKEGNLRQLLKGLPKQERVCG
Ga0318574_100824113	3300031680	Soil	LLFFPVPTPAAETEPITALCARPGLQALREAQEEMAVRDTAAATGIKESTLRQLLKGLPKEGRMCGE
Ga0318572_103951433	3300031681	Soil	MSNLTSFIVLAGLLFFPGPAPADEAESIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLLKG
Ga0318572_108755261	3300031681	Soil	MSNLSFFIVLAGLLLFPDPTPAAETEPITALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLLKGL
Ga0318560_102733421	3300031682	Soil	MIVQGNKMSKLTFFIVLAGLLFFPGPLPAGERDEPIAALCARRHLQALREGQEEMTVRDIAAATGIKESTLRQ
Ga0318560_103590742	3300031682	Soil	MSNLTFFIVLAGLLLFTGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKEGNLRQLLKG
Ga0318496_102378081	3300031713	Soil	MSNLSFFIVLAGLLFFPVPTPAAETEPITALYARPGLQALREAQEEMAVRDTAAATGIKESTLRQLLKGLPKEGRMCGE
Ga0306917_100359732	3300031719	Soil	MWNRRRPKSRWIKHRLLIQGNKMSKLSFFIVLAGLLLFPGPTPAAETDPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRHLLRGMPKEGRMCGE
Ga0306917_101922953	3300031719	Soil	MSNLSFFIVLAALLLFPGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIK
Ga0318502_100686526	3300031747	Soil	MSNLTSFIVLAGLLFFPGPAPADEAESIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLLKGMPTEGE
Ga0318502_102259542	3300031747	Soil	MSNFTFFIVLAGLLLFPGPTPAAEREPTAALCARPGLQVLREAQREMTVRDTAAATGIKESSLRQLLKGLPKEGRMCGD
Ga0318494_109363631	3300031751	Soil	MSNLTFFIVLAGLLLFTGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLR
Ga0318509_100258204	3300031768	Soil	MSNLSFFIVLAALLLFPGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQ
Ga0318509_102811871	3300031768	Soil	MSNLSFFIVLAGLLLFPDPTPAAETEPITALCARPGLQALREAQEEMTVRDTAAATRIKESTLRQLLKGLPKEGGM
Ga0318509_107920011	3300031768	Soil	MSNLSFFIVLAGLLLFPDPTPAAETEPITALCARPGLQALREAQEEMTVRDTAAATGIKESTLR
Ga0318509_108539141	3300031768	Soil	MSNLSFFMVLAGLLLFPGPAPAAETEPIAALCARPGLQALREAQEEMTVRDTAAAIGIKESTLRQLLKGLPKEGRTCGE
Ga0318508_10290211	3300031780	Soil	MSNLTFFIVLAGLLLFTGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLLKGLPK
Ga0318547_102462001	3300031781	Soil	MSNLTFFIVLAGLLLFTGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTL
Ga0318548_100121495	3300031793	Soil	MSNLTSSIFLAGLLFFPVPTPAAETEPITALCARPGLQALREAQEEMAVRDTAAATGIKESTLRQ
Ga0318548_103933733	3300031793	Soil	GSGDDPSRVGLIQGNKMSKLSFFIVLAGLLLFPGPTPAAETDPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRHLLRGMPKEGRMCGE
Ga0318557_102217602	3300031795	Soil	MSNFTFFIVLAGLLLFPGPTPAAEREPTAALCARPGLQVLREAQREMTVRDTAAATGIKESTLRQFLKGLP
Ga0318576_100748645	3300031796	Soil	MSNLTSFIVLAGLLLFPGPAPADEAESIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLR
Ga0318523_101942291	3300031798	Soil	MSNLTFFIVLAGLLLFTGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLLKGL
Ga0318497_104499171	3300031805	Soil	MSNLTFFIVLAGLLLFPGPAPADEAESIAALCARPGLQALREAQEEMTVRDTAAAT
Ga0310917_100183921	3300031833	Soil	MSNLSFFIVLAGLLLFPDPTPAAETEPITALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLLK
Ga0310917_100617001	3300031833	Soil	MSNLSFFIVLAGLLLFPDPTPAAETEPITALCARPGLQALREAQEEMTVRDTAAATG
Ga0310917_111182501	3300031833	Soil	PKSRWIKHRLLIQGNKMSKLSFFIVLAGLLLFPGPTPAAETDPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRHLLRGMPKEGRMCGE
Ga0318517_101015301	3300031835	Soil	MSNLSFFIVLAALLLFPGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLR
Ga0318512_101652631	3300031846	Soil	MSNLTFFIVLAGLLLFTGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLL
Ga0318544_102413471	3300031880	Soil	MSNLTSFIVLAGLLFFPGPAPADEAESIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQ
Ga0306925_103839712	3300031890	Soil	MSNLTSSIFLAGLLFFPVPTPAAETEPITALCARPGLQALREAQEEMAVRDTAAATGIKESTLRQLLKGLPKEGRMCGE
Ga0306925_116279742	3300031890	Soil	MFNLSFFIVFAGFLLFSGPTPAAETKPIPAFCARPGLQALREAQEEMTVRDTAAATGIK
Ga0318522_101184411	3300031894	Soil	MSNLSFFIVLAGLLLFPDPTPAAETEPITALCARPGLQALREAQEEMAVRDTAAATGIKESTLRQLLKGLPKEGRMCGE
Ga0306921_101209716	3300031912	Soil	MSNLSFFIVLAGLLFFPVPTPAAETEPITALCARPGLQALREAQEEMAVRDTAAATGIKESTLRQLLKGLPKEGRMCGE
Ga0306921_106740032	3300031912	Soil	MSNLSFFIVLAGLLLFPGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAAATGIKE
Ga0310912_100186266	3300031941	Soil	MSNLTFFIVLAGLLLFTGPTPAAETEPIAALCARPGLQALREAQEEMTVRDTAA
Ga0310912_100473603	3300031941	Soil	MSNLSFFIVLAGLLLFPDPTPAAETEPITALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQ
Ga0310916_106636201	3300031942	Soil	MSNLPFFIVLAGLLLFPGPAPAGEREPVAALCARPGLQALREAQEEMTVRDIAAATGIKE
Ga0310916_110971041	3300031942	Soil	MFNLSFFIVFAGFLLFSGPTPAAETKPIAAFCARPGLQALREAQEEMTVRDTAAATGIKE
Ga0310910_102602243	3300031946	Soil	MSNLSFFIVLAGLLLFPGPTPAAETEPIAALCARPGLQALRQAQEEMTVRDTAAATGIKESTLRQFLK
Ga0318531_101859701	3300031981	Soil	MSNLTSFIVLAGLLFFPGPAPADEAESIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLRQLL
Ga0318545_101632471	3300032042	Soil	MSNLTSFIVLAGLLFFPGPAPADEAESIAALCARPGLQALREAQEEMTVRDTAAATGIKESTLR
Ga0318545_103306711	3300032042	Soil	MSNFTFFIVLAGLLLFPGPTPAAEREPTAALCARPGLQVLREAQREMTVRDTAAATGIKE
Ga0318570_100835792	3300032054	Soil	NHRLLIQGNKMSNLSFFIVLAGLLLFPDPTPAAETEPITALCARPGVQVLREAQEEMTVRDTAAATGIKESTLRQLLKGLPKEGRMCGE
Ga0307471_1018056942	3300032180	Hardwood Forest Soil	MSNLTSFIFLAGLLFFPGPASANGAESIAALCARHELQTVRKAQQEMTVRDTAAATGIKESTLRQLLKGLGNEGEIRCGG
Ga0306920_1001558351	3300032261	Soil	DPSRVGLNHRVLFQGNKMFNLSFFIVFAGFLLFSGPTPAAETKPIPAFCARPGLQALREAQEEMTVRDTAAATGIKESSLRKLLRGLPKEGRMCGE
Ga0306920_1023219911	3300032261	Soil	MSNRSFFIVLAGLLLFPGATPAAETDPIAALCARPGLQVLREAQEEMTVRDTAAATGIKESTLRQLLK
Ga0318519_101440362	3300033290	Soil	SNLTSSIFLAGLLFFPVPTPAAETEPITALCARPGLQALREAQEEMAVRDTAAATGIKESTLRQLLKGLPKEGRMCGE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055146

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences