Metagenome / Metatranscriptome Family F055171

Basic Information
Family ID	F055171
Family Type	Metagenome / Metatranscriptome
Number of Sequences	139
Average Sequence Length	82 residues
Representative Sequence	VGDILIREGDFRHAFPEDITGAIRLNGNWSESEMETWGTEMPMTALDSLHVDLEAAQYEMKSRTSAKAEKPAAVPTEQAAS
Number of Associated Samples	119
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.45 %
% of genes near scaffold ends (potentially truncated)	96.40 %
% of genes from short scaffolds (< 2000 bps)	82.01 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.32

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Bacteria (98.561 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa (11.511 % of family members)
Environment Ontology (ENVO)	Unclassified (20.863 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (62.590 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106 1JGI12650J13346_10053851 2JGI12635J15846_104621782 3JGI12635J15846_105471942 4JGIcombinedJ26739_1003745112 5JGIcombinedJ26739_1004571862 6JGI25613J43889_100649561 7Ga0062385_101192381 8Ga0062385_103015661 9Ga0062385_110892502 10Ga0062384_1014736841 11Ga0062387_1006295391 12Ga0062389_1002791803 13Ga0062386_1004273991 14Ga0066672_110051212 15Ga0066679_100571081 16Ga0070733_102627812 17Ga0070732_102758342 18Ga0070762_103769771 19Ga0070764_100683693 20Ga0070766_106933732 21Ga0075030_1016422851 22Ga0075018_100124704 23Ga0070765_1001476541 24Ga0073928_108622672 25Ga0099792_104327822 26Ga0116220_100427283 27Ga0116110_10269151 28Ga0116101_11088912 29Ga0116219_104665301 30Ga0116223_107218291 31Ga0074046_100510355 32Ga0136449_1039931682 33Ga0137392_105228201 34Ga0137360_100657881 35Ga0137413_117585882 36Ga0137410_100673431 37Ga0181537_103096661 38Ga0181516_101108783 39Ga0181522_100603623 40Ga0181522_109442141 41Ga0137409_100453524 42Ga0187783_105139981 43Ga0187781_103151712 44Ga0187782_109837391 45Ga0187884_103247541 46Ga0187857_100572471 47Ga0187883_100907161 48Ga0187855_100399411 49Ga0187887_105967562 50Ga0187784_102343524 51Ga0187771_110176651 52Ga0187800_15081312 53Ga0182025_10264574 54Ga0182025_11193071 55Ga0210403_112814211 56Ga0210399_102743973 57Ga0210399_106078032 58Ga0210399_107420322 59Ga0210404_104350161 60Ga0210406_100865571 61Ga0210396_100257301 62Ga0210397_104266791 63Ga0210397_107676801 64Ga0210384_111911291 65Ga0210390_103340062 66Ga0210390_111317772 67Ga0210398_108617121 68Ga0210398_108709992 69Ga0210402_116399192 70Ga0212123_100823315 71Ga0212123_101747021 72Ga0228600_10144992 73Ga0224572_10593092 74Ga0224564_11192871 75Ga0224556_10126191 76Ga0224556_10751672 77Ga0208936_10137332 78Ga0208194_10012365 79Ga0208691_10806121 80Ga0179587_102165003 81Ga0209529_10238002 82Ga0209010_10680721 83Ga0209733_10807082 84Ga0209221_10572702 85Ga0209040_100805353 86Ga0209693_106158902 87Ga0209167_102554302 88Ga0209275_105106101 89Ga0209380_103116971 90Ga0209624_105343051 91Ga0209006_100553444 92Ga0209168_104800841 93Ga0137415_112235702 94Ga0302156_105220201 95Ga0302224_102830801 96Ga0302224_104567542 97Ga0302198_103271282 98Ga0302232_105427292 99Ga0302227_103992182 100Ga0302222_100245104 101Ga0302228_104286561 102Ga0302155_101721982 103Ga0308309_101269743 104Ga0311368_101383861 105Ga0311329_103026352 106Ga0311358_102795021 107Ga0302188_104850362 108Ga0311338_103237071 109Ga0302178_101711592 110Ga0302178_102157021 111Ga0302274_100719111 112Ga0302192_104303501 113Ga0302183_103085512 114Ga0302193_103242032 115Ga0311357_115801321 116Ga0316363_103594272 117Ga0302313_101434741 118Ga0265461_140375861 119Ga0265770_10161091 120Ga0265740_10179822 121Ga0265760_100053111 122Ga0302324_1008470481 123Ga0302326_106561471 124Ga0302326_112336021 125Ga0310686_1013571803 126Ga0310686_1027857061 127Ga0310686_1113851473 128Ga0307474_112279452 129Ga0307475_103579241 130Ga0307478_103859332 131Ga0307479_107798721 132Ga0311301_108832312 133Ga0311301_126914392 134Ga0311301_127481811 135Ga0307471_1005380093 136Ga0335075_101580663 137Ga0334792_025233_49_309 138Ga0370483_0172608_445_708 139Ga0370492_0190370_580_837
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106 1JGI12650J13346_10053851 2JGIcombinedJ26739_1003745112 3JGIcombinedJ26739_1004571862 4Ga0062385_101192381 5Ga0062385_110892502 6Ga0062389_1002791803 7Ga0066672_110051212 8Ga0066679_100571081 9Ga0075030_1016422851 10Ga0075018_100124704 11Ga0070765_1001476541 12Ga0116110_10269151 13Ga0181522_100603623 14Ga0137409_100453524 15Ga0187783_105139981 16Ga0187782_109837391 17Ga0187771_110176651 18Ga0182025_10264574 19Ga0210399_102743973 20Ga0210406_100865571 21Ga0210397_107676801 22Ga0224556_10751672 23Ga0209221_10572702 24Ga0209167_102554302 25Ga0302156_105220201 26Ga0302324_1008470481 27Ga0307475_103579241 28Ga0335075_101580663 29Ga0334792_025233_49_309
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80. 1Ga0181537_103096661 2JGI12650J13346_10053851 3JGI12635J15846_104621782 4Ga0062385_101192381 5Ga0062385_110892502 6Ga0062389_1002791803 7Ga0066672_110051212 8Ga0066679_100571081 9Ga0070733_102627812 10Ga0070766_106933732 11Ga0075030_1016422851 12Ga0075018_100124704 13Ga0070765_1001476541 14Ga0073928_108622672 15Ga0116219_104665301 16Ga0136449_1039931682 17Ga0137392_105228201 18Ga0137413_117585882 19Ga0181522_109442141 20Ga0137409_100453524 21Ga0187783_105139981 22Ga0187781_103151712 23Ga0187782_109837391 24Ga0187855_100399411 25Ga0187784_102343524 26Ga0187771_110176651 27Ga0187800_15081312 28Ga0182025_11193071 29Ga0210399_102743973 30Ga0210399_106078032 31Ga0210406_100865571 32Ga0210384_111911291 33Ga0210398_108617121 34Ga0210398_108709992 35Ga0210402_116399192 36Ga0212123_101747021 37Ga0224564_11192871 38Ga0224556_10751672 39Ga0208936_10137332 40Ga0208194_10012365 41Ga0209010_10680721 42Ga0209221_10572702 43Ga0209167_102554302 44Ga0209275_105106101 45Ga0209168_104800841 46Ga0302232_105427292 47Ga0302155_101721982 48Ga0311357_115801321 49Ga0316363_103594272 50Ga0302313_101434741 51Ga0302326_106561471 52Ga0302326_112336021 53Ga0307475_103579241 54Ga0311301_127481811 55Ga0335075_101580663 56Ga0334792_025233_49_309 57Ga0370483_0172608_445_708 58Ga0370492_0190370_580_837
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.52% β-sheet: 0.00% Coil/Unstructured: 72.48%
Feature Viewer
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.32
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.32
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Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF13649	Methyltransf_25	23.74
PF10672	Methyltrans_SAM	17.27
PF00011	HSP20	5.76
PF12847	Methyltransf_18	5.04
PF02861	Clp_N	2.88
PF02591	zf-RING_7	1.44
PF11066	DUF2867	0.72
PF15780	ASH	0.72
PF07724	AAA_2	0.72
PF13489	Methyltransf_23	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	5.76
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	2.88
COG1579	Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domain	General function prediction only [R]	1.44

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.56 %
Unclassified	root	N/A	1.44 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.56 %
Unclassified	root	N/A	1.44 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.56 %
Unclassified	root	N/A	1.44 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	78.42 %
Unclassified	root	N/A	1.44 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	12.95 %
Unclassified	root	N/A	1.44 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	61.15 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.15 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	12.95 %
Unclassified	root	N/A	1.44 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.15 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12.95 %
Unclassified	root	N/A	1.44 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.15 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.44 %
Unclassified	root	N/A	1.44 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	61.15 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.44 %
Unclassified	root	N/A	1.44 %

Scaffold	Taxonomy	Length	IMG/M Link
3300001159\|JGI12650J13346_1005385	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300001593\|JGI12635J15846_10462178	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300001593\|JGI12635J15846_10547194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300002245\|JGIcombinedJ26739_100374511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1304	Open in IMG/M
3300002245\|JGIcombinedJ26739_100457186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1154	Open in IMG/M
3300002907\|JGI25613J43889_10064956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	998	Open in IMG/M
3300004080\|Ga0062385_10119238	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1312	Open in IMG/M
3300004080\|Ga0062385_10301566	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M
3300004080\|Ga0062385_11089250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300004082\|Ga0062384_101473684	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.56%
Host-Associated	Host-Associated	1.44%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	19.42%
Plants	Host-Associated → Plants	1.44%
Terrestrial	Environmental → Terrestrial	79.14%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	15.83%
Peat	Environmental → Terrestrial → Peat	20.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.72%
Roots	Host-Associated → Plants → Roots	0.72%
Sediment	Environmental → Aquatic → Sediment	1.44%
Soil	Environmental → Terrestrial → Soil	58.99%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.16%

Habitat	Taxonomy	Distribution
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.16%
Loam	Environmental → Terrestrial → Soil → Loam	13.67%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.69%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	20.14%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.44%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.72%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.83%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.63%

Habitat	Taxonomy	Distribution
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.16%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.11%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.67%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.16%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.44%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	20.14%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.19%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	3.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.44%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	6.47%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.88%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.76%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.91%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.60%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.16%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	11.51%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.60%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	3.60%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.72%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.76%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.72%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.51%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.04%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.16%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.88%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.60%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.44%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.76%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.44%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001159	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M

Showing 1 to 10 of 119 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12650J13346_10053851	3300001159	Forest Soil	LIGNILIREGDYRHAFPEDITGAIRLNGSWTERDMENWGTEMPMTALDTLHVDLEAARYEMTSRASAKPESQPVPSGQAAS*
JGI12635J15846_104621782	3300001593	Forest Soil	VGDILIREGDYRHAFPEDITGAIRLNGSWTERDMENWGTEMPMTALDTLHVDLEAARYEMSSRTSAKSESPAVPTEQAAS*
JGI12635J15846_105471942	3300001593	Forest Soil	GNILIREGDFRHAFPEDITGAIRLNGSWSEKEMETWGTEMPMTALDSLHVDLEAAQYEMKSRTSAKPEKPAPVPTEQAAR*
JGIcombinedJ26739_1003745112	3300002245	Forest Soil	MGTGRLIGDILIREGDYRHAFPEDITGAIRLNGSWSEAEMENWGTEMPMTALDALHTDLEAARYEMVSR
JGIcombinedJ26739_1004571862	3300002245	Forest Soil	FLCLANAAGQASRRVFDMHTGRLIGDILIREGDYRHAFPEDITSAIRLNGSWTERDMENWGTEMPMTALDTLHVDLEAARYEMTSRTSKPESQPVPSGQAAS*
JGI25613J43889_100649561	3300002907	Grasslands Soil	LMREGDFRHAFPEDITGAIRLNGSWTEREMETWGTEMPMTALDSLHVDLEAAQYEMKSRASAKSETPATVPPQHAAS*
Ga0062385_101192381	3300004080	Bog Forest Soil	GQATRRVFDMATGRLIGDILLREGDFRHAFPEDITGAIRLNGSWPEAEMESWGAEMPMTALDSLHTDLEAARYEMTHRTSAKSGTQAAVPAEQAAS*
Ga0062385_103015661	3300004080	Bog Forest Soil	GQATRRVFDMHTGRLVGDILIREGDFRHAFPEDITGAIRLNGSWTEHEMETWGAEMPMTALDSLHVDLEAAQYEMRTRTPGKTEKPAAVTEQAAS*
Ga0062385_110892502	3300004080	Bog Forest Soil	AFPEDITAAIRLNGSWTEHEMETWGTEMPMTALDSLHVDLEAAQYEMKSHSSAKSEKPAGVPTEQAAS*
Ga0062384_1014736841	3300004082	Bog Forest Soil	EGDFRHAFPEDITGAIRLNGSWTEHEMETWGTEMPMTALDSLHVDLEAAQYEMRTRTPGKTEKPAAVPTEQAAS*
Ga0062387_1006295391	3300004091	Bog Forest Soil	CLTTASGQSSRRVFDMHTGRLIGDILIREGDFRHAFPEDITGAIRLNGSWTEHEMETWGTEMPMTALDSLHVDLEAAQYEMKSHSSAKSEKPAGVPTEQAAS*
Ga0062389_1002791803	3300004092	Bog Forest Soil	NREGDFRHAFPEDITGAIRLNGSWTEREMETWGAEMPMTALDSLHVDLEAAQYEMRTRSTKPGAPASVPTEQAAS*
Ga0062386_1004273991	3300004152	Bog Forest Soil	HAFPEDITGAIRLNGSWSEQEMENWGTEMPMTALDSLHIDLEAARYEMSARTTAKAEKPAGVPTGQAAS*
Ga0066672_110051212	3300005167	Soil	AFPEDITGAIRLNGSWTEREMENWGTEMPMTALDSLHTDLEAARYEMSSRAAAQSETHVPPQHAAS*
Ga0066679_100571081	3300005176	Soil	VGDILIREGDYRHAFPEDITGAIRLNGSWTEDELDAWGTELPMVLLDSLQADLEAAQAEMNTRSSAKSEAHPPVPSEQAAS*
Ga0070733_102627812	3300005541	Surface Soil	GQASRRVFDMHTGRLIGDILIREGDYRHAFPEDITGAIRLNGSWTEHDMETWGAEMPMTALDSLHSDLEAARYEMTSRPSKTGSPAAVPTEQAAS*
Ga0070732_102758342	3300005542	Surface Soil	RLIGDILIREGDYRHAFPEDITGAIRLNGSWTEDELDAWGTELPMVLLDALQADLEAARAEMNARSTAKSDTHPPVASEQAAS*
Ga0070762_103769771	3300005602	Soil	NNAAGQATRRVFDMHTGRLVGDILIREGDFRHAFPEDITGAIRLNGSWTEREMETWGTEMPMTALDSLHVDLEAAQYEMRTRTSSKAEKPAAVPTEQAAS*
Ga0070764_100683693	3300005712	Soil	PEDITGAIRLNGSWTEREMETWGTEMPMTALDSLHVDLEAAQYEMRTRTSGKAEKPATIPTEQAAS*
Ga0070766_106933732	3300005921	Soil	ASRRVFDMHTGRLIGDILIREGDFRHAFPEDITGAIRLNGSWTENDMENWGTEMPMTALDSLHVDLEAARYEMTAHGGKSKTSTPVPTEQAAS*
Ga0075030_1016422851	3300006162	Watersheds	VLIREGDYRQAFPEDITGAIRLNGNWSEAEMESWGSEIPSLALDSLVYDLAAARTEMSARPPSAKHAAEEVPSEQAAS*
Ga0075018_100124704	3300006172	Watersheds	SSRRVFNTHSGRLVGDILSREGDYRQAFPEDITGAIRLNGNWPEAEMETWGAEIPTSALDTLVFDLTAARTEMNARVSTKHGSTSEVPSEHAAR*
Ga0070765_1001476541	3300006176	Soil	RLLGDILIREGDYRHAFPEDITGAIRLNGSWPDAEIEEWGVEMPMTALDSLHTDLEAARYEMSSRASAKSGMPAPTPTEQAAR*
Ga0073928_108622672	3300006893	Iron-Sulfur Acid Spring	FRHAFPEDITGAIRLNGSWTENEMENWGTEMPMTALDSLHVDLEAAQYEMRSRTTKSGTAAPVPTEQAAS*
Ga0099792_104327822	3300009143	Vadose Zone Soil	LTREGDYRHAFPEDITGAIRLNGSWTERDMENWGAEMPMTALDSLHTDLEAARYEMSSRSSAKSESPAVPTEQAAS*
Ga0116220_100427283	3300009525	Peatlands Soil	SRRVFDMGTGRLIGDILIREGDYRHALPEDITGAVRLNGSWAESEMENWGTEMPMTALDSLHVDLEAARYEMSSHASAKSKTPAAISTEQAAS*
Ga0116110_10269151	3300009643	Peatland	PEDIAGAIRLNGSWSETEMENWGTEMPMTALDSLHTDLEAARFEMSSRTSAKSDIPSTVPTGQVAS*
Ga0116101_11088912	3300009759	Peatland	FPEDITGAIRLNGSWPDAEIEEWGTEMPMTALDSLHTDLEAARYEMTSRSSAKSGVPAPTPTEQAAS*
Ga0116219_104665301	3300009824	Peatlands Soil	VFDMATGRLIGDILIREGDFRHAFPEDITGAVRLNGSWPEAEMEAWGTEMPMTALDSLHVDLEAARYEMSSRSTAKSETAAAVPTGQVAS*
Ga0116223_107218291	3300009839	Peatlands Soil	RRVFDMGTGRLIGDILIREGDYRHAFPEDITGAVRLNGSWAESEMENWGTEMPMTALDSLHVDLEAARYEMSSHASAKSKTPAAISTEQAAS*
Ga0074046_100510355	3300010339	Bog Forest Soil	RHAFPEDITGAIRLNGNWSEAEMETWGTEMPMTALDSLHTDLEAARYEMTSRTSAKAQVPAAVPTEQAAS*
Ga0136449_1039931682	3300010379	Peatlands Soil	IGDILIREGDFRHSFPEDITGAIRLNGSWTEREMETWGTEMPMTALDSLHTDLEAARYEMSAHASSKSKTPATIPTEQAAS*
Ga0137392_105228201	3300011269	Vadose Zone Soil	YRHAFPEDITGAIRLNGSWSERDMENWGAEMPMTALDSLHVDLEAAQYEMSARTSAKAEKPAGVPTEQAAS*
Ga0137360_100657881	3300012361	Vadose Zone Soil	HTGRLVGDILIREGDYRHAFPEDITGAIRLNGSWTEHEMENWGTEMPMTALDSLHVDLEAAQYEMKSRASAKSETPAPAAPQHAAS*
Ga0137413_117585882	3300012924	Vadose Zone Soil	ATRRVFDMHTGRLVGNILMREGDFRHAFPEDITGAIRLNGSWTEREMETWGTEMPMTALDSLHVDLEAAQYEMKSRASAKSETPATVPPQHAAS*
Ga0137410_100673431	3300012944	Vadose Zone Soil	AGQASRRVFDMHTGRLVGDILIREGDYRHAFPEDITGAIRLNGSWTEHEMENWGTEMPMTALDSLHVDLEAAQYEMKSRASSKSEPPATVPTQHVAS*
Ga0181537_103096661	3300014201	Bog	VGDILIREGDFRHAFPEDITGAIRLNGNWSESEMETWGTEMPMTALDSLHVDLEAAQYEMKSRTSAKAEKPAAVPTEQAAS*
Ga0181516_101108783	3300014655	Bog	ITGAIRLNGNWSESEMETWGTEMPMTALDSLHVDLEAAQYEMKSRTSAKAEKPAAVPTEQAAS*
Ga0181522_100603623	3300014657	Bog	AIRLNGHWSENEMETWGAEMPMTALDTLHADLELARYEMTHPAAKTKTPAAVPTGQVAS*
Ga0181522_109442141	3300014657	Bog	LIGDILIREGDYRHAFPEDITGAIRLNGNWSENEMETWGTEMPMTALDSLHTDLDAARYEMSSRTPARTDSSPTIPTGQAAS*
Ga0137409_100453524	3300015245	Vadose Zone Soil	MHTGRLVGDILIREGDYRHAFPEDITGAIRLNGSWTEHEMENWGTEMPMTALDSLHVDLEAAQYEMKSRASSKSEPPATVPTQHVAS*
Ga0187783_105139981	3300017970	Tropical Peatland	EGDFRHAFPEDITGAIRLNGSWPEDEMETWGAEMPMTALDSLHADLDAARYEIAHPSVKVKTPTPVPTGQVAS
Ga0187781_103151712	3300017972	Tropical Peatland	RHAFPDDITGAIRLNGSWTEHEMETWGTEMPMTALDSLHADLEAARYEMTHPAAKSKTHPPVPTEQAAS
Ga0187782_109837391	3300017975	Tropical Peatland	REGDYRHAFPEDITGAVRLNGGWSEEEMDEWGAEMPMVALDSLHFDLEAAKSEMHARSAATAAHTIASEHSAAS
Ga0187884_103247541	3300018009	Peatland	LRPAAGQATRRVFDMGTGRLIGDILAREGDYRRAFPEDISGAIRLNGSWPEAEMEEWGTEMPMTALDSLHTDLEAARYEMTSRAAKPDMPSTVPTGQAA
Ga0187857_100572471	3300018026	Peatland	DYRHAFPEDITGAIRLNGSWPDAEIEEWGTEMPMTALDSLHTDLEAARYEMTSRSSAKSGVPAPTPTEQAAS
Ga0187883_100907161	3300018037	Peatland	PEDIAGAIRLNGSWSETEMENWGTEMPMTALDSLHTDLEAARFEMSSRTSAKSDIPSTVPTGQVAS
Ga0187855_100399411	3300018038	Peatland	LLGDILIREGDFRHAFPGDITGAIRLNGHWSEAEMENWGTEMPMTALDSLHTDLEAARYEMSSRATAKTQTPAAVPTEQAAS
Ga0187887_105967562	3300018043	Peatland	SRRIFDMGTGRLIGDILIREGDFRHAFPEDITGAIRLNGNWSEKEMETWGIEMPMTALDSLHVDLEAAQYEMKSRTSAKAEKSAPVPTEQAAS
Ga0187784_102343524	3300018062	Tropical Peatland	REGDFRHAFPEDITGAIRLNGSWSEEEMETWGTEMPTTVLDSLHADLDLARYEMTHPSGKVKQPAAVPTGQVAS
Ga0187771_110176651	3300018088	Tropical Peatland	TGAIRLNGAWAEEEMETWGAEMPMTVLDSLHVDLEAARREMTARTPAQSNAAAAVPTEQAAS
Ga0187800_15081312	3300019278	Peatland	MHTGRLIGDILIREGDFRHAFPEEISGAIRLNGSWAEEEMETWGTEMPMTALDSLHIDLEAAQYEMTHPAVKAKAQTPAAVPTGQVAS
Ga0182025_10264574	3300019786	Permafrost	LSREGDYRHAIPEDITGAIRLNGSWSEAEIETWGTEMPMNALDSLHVDLEAARYEMSSRTSPKSEIPAVVPTEHIAS
Ga0182025_11193071	3300019786	Permafrost	LSREGDYRHAFPEDISGAIRLNGSWSEAEIETWGTEMPMNALDSLHVDLEAARYEMSSRTSAKSEIPAVVPTEHIAS
Ga0210403_112814211	3300020580	Soil	EGDFRHAFPEDITGAIRLNGSWSEREMETWGTEMPMTALDSLHVDLEAAQYEMRTRSTGKTEKPAAVPTEQAAS
Ga0210399_102743973	3300020581	Soil	LCLTSANGQASRRIFDMGTGRLIGDILIREGDYRHAFPEDITGAIRLNGSWSEAEMETWGTEMPMNALDALHIDLEAARYEMSSRTAKSEVPAAVPTHHVAS
Ga0210399_106078032	3300020581	Soil	EGDFRHAFPEDITGAIRLNGIWTEHEMETWGTEMPMTALDSLHVDLEAAQYEMRTRATAKSETPVPAPPQHAAS
Ga0210399_107420322	3300020581	Soil	RRVFDMHTGRLIGDILIREGDFRHAFPEDITGAIRLNGSWTEREMETWGSEMPMTALDSLHVDLEAAQYEMKSRASAKSEAPAAVPPQHAAS
Ga0210404_104350161	3300021088	Soil	NASGQATRRVFDMHTGRLIGDILIREGDFRHAFPEDITGAIRLNGSWTEHEMETWGTEMPMTALDSLHVDLEAAQYEMRTRTSGKTDKPATIPTEQAAS
Ga0210406_100865571	3300021168	Soil	YRQAFPEDITGAVRLNGNWSEKDMENWGTEMPMTALDSLHVDLEAAQYEMKSRPAAKPEAAATTGQAAS
Ga0210396_100257301	3300021180	Soil	EGDYRHAFPEDITGAIRLNGSWSEAEMETWGTEMPMNALDALHADLEAARYEMSSRTATKADVPAAGPAQHVAS
Ga0210397_104266791	3300021403	Soil	FPEDITGAIRLNGSWSEAEIETWGTEMPMTALDALHTDLEAARYEMVSRSSSKSEIPPAVPTQHVAS
Ga0210397_107676801	3300021403	Soil	EDITGAIRLNGSWSEAEMETWGTEMPMNALDALHADLEAARYEMSSRTATKADVPAAGPAQHVAS
Ga0210384_111911291	3300021432	Soil	TNAGGQTSRRVFDMGTGRLLGDILIREGDYRHAFPEDITGAIRLNGSWSEAEMETWGTEMPMNALDALHADLEAARYEMSSRTATKADVPAAGPAQHVAS
Ga0210390_103340062	3300021474	Soil	SFPEDITGAIRLNGSWTENEMETWGTEMPMTALDSLHVDLEAAQYEMRTRTSGKSEKPATIPTEQAAS
Ga0210390_111317772	3300021474	Soil	TGRLIGDILIREGDYRHAFPEDITGAIRLNGSWSEAEMENWGTEMPMTALDALHTDLEAARYEMVSRSSSKSEIPPAVPTQHVAS
Ga0210398_108617121	3300021477	Soil	TGRLVGDILTRVGDFRQAFPEDVTGAIRLNGNWTEREMETWGTEMPMTALDSLHVDLEAAQYEMRSRTAKPEKPAAVPTEQAAS
Ga0210398_108709992	3300021477	Soil	EDITGAIRLNGSWTEADMETWGTEMPMTALDSLHRDLEAARYEMNAHPGKSQTPAAVPTEQAAS
Ga0210402_116399192	3300021478	Soil	MCFANAAGQASRRIFEMHTGRLVGDILIREGDFRHAFPEDITGATRLNGSWSEQEMENWGTEMPMTALDSLHVDLEAAQYEMRTRATAKAEKPAGVPTGQAAS
Ga0212123_100823315	3300022557	Iron-Sulfur Acid Spring	REDDYRHAFPEDITGAIRLNGSWPDAEIEEWGTEMPMTALDSLHTDLEAARYEMTSRSSAKSGVPAPTPTEQAAS
Ga0212123_101747021	3300022557	Iron-Sulfur Acid Spring	SRRVFDMGTGRLIGDILIREGDYRHAFPEDITGAIRLNGSWSEAEMETWGTEMPMTALDALHTDLEAARYEMVSRSSSKSEIPRAVPTQHVAS
Ga0228600_10144992	3300024123	Roots	EDITGAIRLNGNWSEDEMETWGTEMPTNALDALHFDLEAARHEMKARPAVKSDVAAAVPTGQAAS
Ga0224572_10593092	3300024225	Rhizosphere	PEDITGAIRLNGHWTEHEMETWGTEMPMTALDSLHTDLEAARYEMTARTTKSGTPAPVSTEQAAS
Ga0224564_11192871	3300024271	Soil	ILVREGDFRNAFPEDITGAIRLNGHWTEHEMETWGTEMPMTALDSLHTDLEAARYEMTARTTKSGTPAPVSTEQAAS
Ga0224556_10126191	3300024295	Soil	VFDVGTGRLVGDILSREGDFRQAFPEDITGAIRLNGSWTEKEMENWGTEMPMTALDSLHTDLEAARYEMSARTTAKSEKPPSVPTEQAAS
Ga0224556_10751672	3300024295	Soil	GGQATRRVFEMHTGRLVGDILIREGNFRDGFPEDVTGAIRLNGHWSENEMETWGTEMPMTALDSLHVDLEAAQYEMKARPAPKTETPLVPPQHAAS
Ga0208936_10137332	3300025404	Peatland	RCVFDVGTGRLVGDILSREGDFRQAFPEDITGAIRLNGSWTEKEMENWGTEMPMTALDSLHTDLEAARYEMSARTTAKSEKPPSVPTEQAAS
Ga0208194_10012365	3300025412	Peatland	NAGGQATRRVFDLGTGRLIGDILIREGDFRHAFPEDITGAIRLNGSWSDAEMEEWGAEMPMTALDSLHTDLEAARYEMNSRPSTKSGTPAVPTEQAAS
Ga0208691_10806121	3300025612	Peatland	FQFPEDIAGAIRLNGSWSETEMENWGTEMPMTALDSLHTDLEAARFEMSSRTSAKSDIPSTVPTGQVAS
Ga0179587_102165003	3300026557	Vadose Zone Soil	RHAFPEDITGAIRLNGSWTERDMENWGTEMPMTALDSLHTDLEAARYEMSARTSTKSEPVPTGQAAS
Ga0209529_10238002	3300027334	Forest Soil	PEDITGAIRLNGSWTEREMETWGTEMPMTALDSLHVDLEAAQYEMRTRTSGKAATIPTEQAAS
Ga0209010_10680721	3300027370	Forest Soil	NHTAGQATRRVFDMGTGRLIGDILAREGDYRRAFPEDISGAIRLNGSWPEAEMEEWGTEMPMTALDSLHTDLEAARYEMTSRAAKPDMPSTVPTGQAAS
Ga0209733_10807082	3300027591	Forest Soil	SRRVFDMHTGRLIGDILIREGDYRHAFPEDITGAIRLNGSWTERDMENWGTEMPMTALDTLHVDLEAARYEMSSRTSAKSESPAVPTEQAAS
Ga0209221_10572702	3300027609	Forest Soil	GRLIGDILIREGDYRQAFPEDITGAIRLNGNWSEDEMETWGTEMPTNALDALHFDLEAARHEMKARPAVKSDVAAAVPTGQAAS
Ga0209040_100805353	3300027824	Bog Forest Soil	LIGDILIREGDFRHAFPEDITGAIRLNGSWPEAEMEEWGTEMPMTALDSLHIDLEAARYEMNSRPSTKSGTPVVPTEQAAS
Ga0209693_106158902	3300027855	Soil	FRHAFPEDITGAIRLNGSWSEREMETWGTEMPMTALDSLHVDLEAAQYEMRTRTSGKTEKPAAVSTEQAAS
Ga0209167_102554302	3300027867	Surface Soil	DILLREGDFRNAFPEDITGAIRLNGNWSEEEMETWGTEMPTTVLDSLHFDLEAARREASSGSHVKPDVPAPTEQAAS
Ga0209275_105106101	3300027884	Soil	GRLIGDILIREGDFRHAFPEDITGAIRLNGSWTEREMETWGTEMPMTALDSLHVDLEAAQYEMRTRTSGKAEKPATIPTEQAAS
Ga0209380_103116971	3300027889	Soil	ITGAIRLNGSWTEREMETWGTEMPMTALDSLHVDLEAAQYEMRTRTSSKAEKPAAVPTEQAAS
Ga0209624_105343051	3300027895	Forest Soil	RRVFDMHTGRLVGDILIREGDFRHAFPEDITGAIRLNGSWTEHEMENWGTEMPMTALDSLHIDLEAARYEMSSRTSAKPEKPPAVPTEQAAS
Ga0209006_100553444	3300027908	Forest Soil	FLCLVNAAGQASRRVFEMHTGRLVGDILTREGDYRQAFPEDITGAIRLNGSWSERDMENWGTEMPMTALDSLHVDLEAARYEMSARTSGKSGSPAVPTEQAAS
Ga0209168_104800841	3300027986	Surface Soil	ASGQATRRVFDMHTGRLLGDILSREGDYRHAFPEDITGAIRLNGSWSENEMETWGTEMPMTALDSLHVDLEAAQYEMKSRPASKPEAPAVPTEQAAS
Ga0137415_112235702	3300028536	Vadose Zone Soil	RQAFPEDITGAIRLNGSWTEREMENWGTEMPMTALDSLHVDLEAAQYEMKSRASAKSETSATIPPQHAAS
Ga0302156_105220201	3300028748	Bog	SRCVFDVGTGRLVGDILSREGDFRQAFPEDITGAIRLNGSWTEKEMENWGTEIPMNALDSLHTDLEAARYEMNARTTAKPEKPAGVPTEQAAS
Ga0302224_102830801	3300028759	Palsa	AFPEDITGAIRLNGNWSEKEMETWGIEMPMTALDSLHVDLEAAQYEMKSRTSAKPEKPAGVPTEQAAS
Ga0302224_104567542	3300028759	Palsa	EGDFRQAFPEDITGAIRLNGSWTEKEMENWGTEMPMTALDSLHTDLEAARYEMSSRTAAKPEKPAAVPTEQAAS
Ga0302198_103271282	3300028765	Bog	LVGDILIREGNFRDGFPEDVTGAIRLNGHWSENEMETWGTEMPMTALDSLHVDLEAAQYEMKARPAPKTETPLVPPQHAAS
Ga0302232_105427292	3300028789	Palsa	QATRRVFDMSTGRLIGDILIREGDFRHAFPEEITGAIRLNGGWTEREMETWGTEMPMTALDSLHVDLEAARYEMSSRTSAKPEKSASIPSEQAAS
Ga0302227_103992182	3300028795	Palsa	GDFRHAFPEDITGAIRLNGNWSEKEMETWGIEMPMTALDSLHVDLEAAQYEMKSRTSAKPEKPAGVPTEQAAS
Ga0302222_100245104	3300028798	Palsa	HAFPEDITGAIRLNGNWSEKEMETWGIEMPMTALDSLHVDLEAAQYEMKSRTSAKPEKPAGVPTEQAAS
Ga0302228_104286561	3300028808	Palsa	GQASRRIFDMGTGRLIGDILIREGDFRHAFPEDITGAIRLNGNWSEKEMETWGIEMPMTALDSLHVDLEAAQYEMKSRTSAKPEKPAGVPTEQAAS
Ga0302155_101721982	3300028874	Bog	RLLGDILIREGDFRHAFPEDITGAIRLNGNWSEAEMETWGAEMPMTALDSLHSDLEAAQHEMQARPATKPKPTPVPTEHAAS
Ga0308309_101269743	3300028906	Soil	RRVFDMGTGRLLGDILIREGDYRHAFPEDITGAIRLNGSWPDAEIEEWGVEMPMTALDSLHTDLEAARYEMSSRASAKSGMPAPTPTEQAAR
Ga0311368_101383861	3300029882	Palsa	GRLVGDILIREGDFRHAFPEDITGAIRLNGSWTEREMENWGIEMPMTALDSLHIDLEAAQYEMKSRTSAKSEKPAAVPTEQAAS
Ga0311329_103026352	3300029907	Bog	TRRVFEMHTGRLVGDILIREGNFRDGFPEDVTGAIRLNGHWSENEMETWGTEMPMTALDSLHVDLEAAQYEMKARPAPKTETPLVPPQHAAS
Ga0311358_102795021	3300029915	Bog	QASRCVFDVGTGRLVGDILSREGDFRQAFPEDITGAIRLNGSWTEKEMENWGTEIPMNALDSLHTDLEAARYEMNARTTAKPEKPAGVPTEQAAS
Ga0302188_104850362	3300029986	Bog	RRVFEMHTGRLVGDILIREGNFRDGFPEDVTGAIRLNGHWSENEMETWGTEMPMTALDSLHVDLEAAQYEMKARPAPKTETPLVPPQHAAS
Ga0311338_103237071	3300030007	Palsa	CFANAAGQASRRLFDMHTGRLVGDILIREGDFRHAFPEDITGAIRLNGSWTEREMENWGIEMPMTALDSLHIDLEAAQYEMKSRTSAKSEKPAAVPTEQAAS
Ga0302178_101711592	3300030013	Palsa	VGDILIREGDFRHAFPEDITGAIRLNGSWTEREMENWGIEMPMTALDSLHIDLEAAQYEMKSRTSAKSEKPAAVPTEQAAS
Ga0302178_102157021	3300030013	Palsa	FPEEITGAIRLNGGWTEREMETWGTEMPMTALDSLHVDLEAARYEMSSRTSAKPEKSASIPSEQAAS
Ga0302274_100719111	3300030041	Bog	PEDITGAIRLNGNWSEKEMETWGIEMPMTALDSLHVDLEAAQYEMKSRTSAKPEKSAPVPTEQAAS
Ga0302192_104303501	3300030507	Bog	FPEDITGAIRLNGSWTEKEMENWGTEIPMNALDSLHTDLEAARYEMNARTTAKPEKPAGVPTEQAAS
Ga0302183_103085512	3300030509	Palsa	DILIREGDFRHAFPEDITGAIRLNGSWTEREMENWGIEMPMTALDSLHIDLEAAQYEMKSRTSAKSEKPAAVPTEQAAS
Ga0302193_103242032	3300030519	Bog	VGDILIREGNFRDGFPEDVTGAIRLNGHWSENEMETWGTEMPMTALDSLHVDLEAAQYEMKARPAPKTETPLVPPQHAAS
Ga0311357_115801321	3300030524	Palsa	RRVFDMATGRLIGDILIREGDFRHAFPEDITGAIRLNGNWTENEMETWGTEMPMTALDSLHTDLEAARYEMTAHASAKPKTSAVVSTEQAAS
Ga0316363_103594272	3300030659	Peatlands Soil	RRVFDMGTGRLIGDILIREGDYRHAFPEDITGAVRLNGSWAESEMENWGTEMPMTALDSLHVDLEAARYEMSSHASAKSKTPAAISTEQAAS
Ga0302313_101434741	3300030693	Palsa	CLNNAAGQATRRVFDMSTGRLIGDILIREGDFRHAFPEEITGAIRLNGGWTEREMETWGTEMPMNALDSLHADLEAARYEMTHRTSAKSEIPPAVPTQHVAS
Ga0265461_140375861	3300030743	Soil	LNNAAGQSTRRVFDMGTGRLLGDILIREGDYRHAFPEDITGAIRLNGSWPDAEIEEWGVEMPMTALDSLHTDLEAARYEMSARTSAKSGMPAPTPTEQAAR
Ga0265770_10161091	3300030878	Soil	DILTREGDFRQAFPEDVTGAIRLNGNWTEREMETWGTEMPMTALDSLHVDLEAAQYEMRSRTAKPEKPAAVPTEQAAS
Ga0265740_10179822	3300030940	Soil	RVFDMHTGRLVGDILIREGDFRHAFPEDITGAIRLNGSWTEREMETWGTEMPMTALDSLHVDLEAAQYEMRTRTSSKAEKPAAVPTEQAAS
Ga0265760_100053111	3300031090	Soil	GRLVGDILIREGDFRHAFPEDITGAIRLNGSWSEREMETWGTEMPMTALDSLHVDLEAAQYEMRTRSSGKAEKPAAVPTEQAAS
Ga0302324_1008470481	3300031236	Palsa	CLSKAGDQSTRRVYDMHTGRLLGDILTREGDYRQAFPEDITGAIRLNGGWSEDELETWGAEMPMTALDSLHSDLEAARAEMRSRAAAAPAHPVPSEHSAAS
Ga0302326_106561471	3300031525	Palsa	CLSKAGDQSTRRVYDMHTGRLLGDILTREGDYRQAFPEDITGAIRLNGGWSEDELETWGTEMPMTALDSLHSDLEAARAEMRSRAAAAPAHPVPSEHSAAS
Ga0302326_112336021	3300031525	Palsa	DITGAIRLNGSWTEREMENWGTEMPMTALDSLHIDLEAARYEMSSRTSGKPEKPTAVPTEQAAS
Ga0310686_1013571803	3300031708	Soil	LCMHNTGGQASRHVFDVGTGRLIGDILSREGDFRQAFPEDITGAIRLNGSWTEKEMENWGTEMPMTALDSLHTDLEAARYEMSSRTTAKPEKTATVPTEQAAS
Ga0310686_1027857061	3300031708	Soil	TRRVFDMHTGRLVGDILIREGDFRHAFPEDITGAIRLNGSWTEREMETWGTEMPMTALDSLHVDLEAAQYEMRTRTSSKAEKPAAVPTEQAAS
Ga0310686_1113851473	3300031708	Soil	LCMHNTGGQASRHVFDVGTGRLIGDILSREGDFRQAFPEDITSAIRLNGSWTEKEMENWGTEMPMTALDSLHTDLEAARYEMSSRTTAKPEKTATVPTEQAAS
Ga0307474_112279452	3300031718	Hardwood Forest Soil	RVFDMHTGRLVGDILIREGDFRHAFPEDITGAIRLNGSWTEREMETWGTEMPMTALDSLHVDLEAAQYEMRTRTSGKTEKPAAVPTEQAAS
Ga0307475_103579241	3300031754	Hardwood Forest Soil	NAAGQASRSVYEMHTGRLIGDILIREGDYRHAFPEDITGAIRLNGGWTEHELESWGTELPMVVLDQLQADLEAARYEMNSHTSAKSETTAPAVSEQAAS
Ga0307478_103859332	3300031823	Hardwood Forest Soil	LTNANGQASRRVFDMGTGRLIGDILIREADYRHAFPEDITGAIRLNGSWSEAEIETWGTEMPMTALDALHTDLEAARYEMVSRSSSKSEIPPAVPTQHVAS
Ga0307479_107798721	3300031962	Hardwood Forest Soil	DITGAIRLNGSWTEREMETWGTEMPMTALDSLHTDLEAARYEMSTHPSSKSKTPATIPTEQAAS
Ga0311301_108832312	3300032160	Peatlands Soil	LTNAAGQASRRVFDMHTGRLIGDILIREGDFRHAFPEDITGAIRLNGSWTEHEMETWGAEMPMTALDSLHTDLEAARYEMTSRTSAKSGTQAAVPTEQAAS
Ga0311301_126914392	3300032160	Peatlands Soil	GDILIREGDFRHSFPEDITGAIRLNGSWTEREMETWGTEMPMTALDSLHTDLEAARYEMSAHASSKSKTPATIPTEQAAS
Ga0311301_127481811	3300032160	Peatlands Soil	IREGDFRHAFPEDITGAIRLNGSWTEHEMETWGAEMPMTALDSLHTDLEAARYEMTSRSSAKSGTQAGVPTEQAAS
Ga0307471_1005380093	3300032180	Hardwood Forest Soil	REGDYRHAFPEDITGAIRLNGSWTERDMENWGTEMPMTALDSLHTDLEAARYEMSSRTSAKSETPVPTGQAAS
Ga0335075_101580663	3300032896	Soil	RRVFDMHTGRFIGDILIREGDYRQAFPEDITGAIRLNGSWREDDMETWGAEMPMTALDSLHSDLEAARYEMNSRPAKSQSPAPVTTEHAAS
Ga0334792_025233_49_309	3300033888	Soil	MDTGRMMGDILIREGDFRNAFPEDITGAIRLNGSWSEDEMETWGTEMPMTALDSLHVDLEAARYEMSARPAKTETAPAVPTEQAAS
Ga0370483_0172608_445_708	3300034124	Untreated Peat Soil	MGTGRLIGDILIREGDFRHAFPEEITGAIRLNGSWPEAEMEEWGTEMPMNALDSLQIDLEAARYEMAHRTSAKPGIPAPVPTGQAAS
Ga0370492_0190370_580_837	3300034282	Untreated Peat Soil	TGRLIGDILIREGDYRHAFPEDITGAIRLNGSWSETEMENWGTEMPMTALDSLHTDLGAARFEMSSRTSAKSDIPSTVPTGQVAS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055171

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences