Metagenome Family F055233

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055233
Family Type	Metagenome
Number of Sequences	139
Average Sequence Length	56 residues
Representative Sequence	EVHRVPANRNYDTPVRRLVRERQAVKIVNAQEAIDDYEKWHDLYKRIIVDRSQH
Number of Associated Samples	111
Number of Associated Scaffolds	139

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	94.24 %
% of genes from short scaffolds (< 2000 bps)	90.65 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.403 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (30.216 % of family members)
Environment Ontology (ENVO)	Unclassified (36.691 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.043 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 42.68% β-sheet: 0.00% Coil/Unstructured: 57.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 139 Family Scaffolds
PF01564	Spermine_synth	23.74
PF10017	Methyltransf_33	15.11
PF02321	OEP	10.79
PF01627	Hpt	2.88
PF12695	Abhydrolase_5	2.16
PF00768	Peptidase_S11	2.16
PF06439	3keto-disac_hyd	2.16
PF04237	YjbR	2.16
PF00873	ACR_tran	1.44
PF00839	Cys_rich_FGFR	1.44
PF16868	NMT1_3	1.44
PF08530	PepX_C	1.44
PF01925	TauE	0.72
PF00719	Pyrophosphatase	0.72
PF01642	MM_CoA_mutase	0.72
PF13432	TPR_16	0.72
PF08546	ApbA_C	0.72
PF06764	DUF1223	0.72
PF05721	PhyH	0.72
PF01636	APH	0.72
PF13620	CarboxypepD_reg	0.72
PF07238	PilZ	0.72
PF02668	TauD	0.72
PF03069	FmdA_AmdA	0.72
PF02798	GST_N	0.72
PF08487	VIT	0.72
PF09980	DUF2214	0.72
PF00857	Isochorismatase	0.72
PF13544	Obsolete Pfam Family	0.72
PF13343	SBP_bac_6	0.72

COG ID	Name	Functional Category	% Frequency in 139 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	21.58
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	2.16
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	2.16
COG2936	Predicted acyl esterase	General function prediction only [R]	1.44
COG0221	Inorganic pyrophosphatase	Energy production and conversion [C]	0.72
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.72
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.72
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72
COG1884	Methylmalonyl-CoA mutase, N-terminal domain/subunit	Lipid transport and metabolism [I]	0.72
COG1893	Ketopantoate reductase	Coenzyme transport and metabolism [H]	0.72
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	0.72
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72
COG5429	Uncharacterized conserved protein, DUF1223 domain	Function unknown [S]	0.72

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.12 %
Unclassified	root	N/A	2.88 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.40 %
Unclassified	root	N/A	2.88 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.72 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	62.59 %
Unclassified	root	N/A	2.88 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	2.16 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	1.44 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.72 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	47.48 %
Unclassified	root	N/A	2.88 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.16 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.44 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.44 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.72 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.72 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	28.78 %
Unclassified	root	N/A	2.88 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2.16 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2.16 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.44 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.72 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples	0.72 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	28.78 %
Unclassified	root	N/A	2.88 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	2.16 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.44 %
Usitatibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae	0.72 %
uncultured beta proteobacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	0.72 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.72 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.72 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.72 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.72 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	28.78 %
Unclassified	root	N/A	2.88 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	2.16 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.44 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.72 %
Usitatibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter	0.72 %
uncultured beta proteobacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	0.72 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.72 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.72 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.72 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	28.78 %
Unclassified	root	N/A	2.88 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	2.16 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.44 %
Usitatibacter palustris	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	0.72 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.72 %
uncultured beta proteobacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	0.72 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.72 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.72 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	0.72 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10253173	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300002558\|JGI25385J37094_10113724	All Organisms → cellular organisms → Bacteria	782	Open in IMG/M
3300002906\|JGI25614J43888_10185550	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300002917\|JGI25616J43925_10295420	All Organisms → cellular organisms → Bacteria → Proteobacteria	603	Open in IMG/M
3300005167\|Ga0066672_10251493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1138	Open in IMG/M
3300005176\|Ga0066679_10098038	All Organisms → cellular organisms → Bacteria → Proteobacteria	1777	Open in IMG/M
3300005178\|Ga0066688_10821571	Not Available	580	Open in IMG/M
3300005179\|Ga0066684_10562264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	765	Open in IMG/M
3300005181\|Ga0066678_10419974	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300005438\|Ga0070701_11007098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	581	Open in IMG/M
3300005444\|Ga0070694_100375917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1107	Open in IMG/M
3300005445\|Ga0070708_101620274	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300005447\|Ga0066689_11026843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	507	Open in IMG/M
3300005471\|Ga0070698_101426712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	643	Open in IMG/M
3300005529\|Ga0070741_10235962	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	1752	Open in IMG/M
3300005547\|Ga0070693_100908988	All Organisms → cellular organisms → Bacteria → Proteobacteria	660	Open in IMG/M
3300005554\|Ga0066661_10687778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	601	Open in IMG/M
3300005557\|Ga0066704_10094165	All Organisms → cellular organisms → Bacteria	1958	Open in IMG/M
3300005559\|Ga0066700_10066524	All Organisms → cellular organisms → Bacteria	2271	Open in IMG/M
3300005569\|Ga0066705_10795933	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300005575\|Ga0066702_10354891	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300005713\|Ga0066905_101177684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	684	Open in IMG/M
3300006031\|Ga0066651_10243827	All Organisms → cellular organisms → Bacteria → Proteobacteria	953	Open in IMG/M
3300006032\|Ga0066696_10460338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	834	Open in IMG/M
3300006032\|Ga0066696_11038945	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300006041\|Ga0075023_100330509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	638	Open in IMG/M
3300006163\|Ga0070715_10515429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	687	Open in IMG/M
3300006173\|Ga0070716_101788652	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	508	Open in IMG/M
3300006175\|Ga0070712_101904405	Not Available	521	Open in IMG/M
3300006791\|Ga0066653_10095885	All Organisms → cellular organisms → Bacteria → Proteobacteria	1342	Open in IMG/M
3300006800\|Ga0066660_10740748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	803	Open in IMG/M
3300006806\|Ga0079220_10950446	Not Available	674	Open in IMG/M
3300006854\|Ga0075425_101906022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	666	Open in IMG/M
3300006854\|Ga0075425_102302281	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	599	Open in IMG/M
3300006903\|Ga0075426_10720161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	749	Open in IMG/M
3300006904\|Ga0075424_101625795	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300006904\|Ga0075424_102378411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	556	Open in IMG/M
3300006914\|Ga0075436_100008777	All Organisms → cellular organisms → Bacteria → Proteobacteria	6911	Open in IMG/M
3300006914\|Ga0075436_100565200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	836	Open in IMG/M
3300007076\|Ga0075435_101297097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	638	Open in IMG/M
3300007255\|Ga0099791_10230849	All Organisms → cellular organisms → Bacteria	875	Open in IMG/M
3300007258\|Ga0099793_10097371	All Organisms → cellular organisms → Bacteria → Proteobacteria	1358	Open in IMG/M
3300007258\|Ga0099793_10374939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300009012\|Ga0066710_100724072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1519	Open in IMG/M
3300009089\|Ga0099828_10383678	All Organisms → cellular organisms → Bacteria → Proteobacteria	1267	Open in IMG/M
3300009089\|Ga0099828_11254812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	656	Open in IMG/M
3300009090\|Ga0099827_10521800	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300009143\|Ga0099792_11203085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	514	Open in IMG/M
3300009162\|Ga0075423_11886263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	645	Open in IMG/M
3300009162\|Ga0075423_12166975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	603	Open in IMG/M
3300009545\|Ga0105237_11319469	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	728	Open in IMG/M
3300010301\|Ga0134070_10400432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	541	Open in IMG/M
3300010321\|Ga0134067_10199515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	735	Open in IMG/M
3300010333\|Ga0134080_10115917	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300010399\|Ga0134127_11993062	Not Available	658	Open in IMG/M
3300010401\|Ga0134121_10433013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1196	Open in IMG/M
3300011269\|Ga0137392_10148806	All Organisms → cellular organisms → Bacteria → Proteobacteria	1888	Open in IMG/M
3300011270\|Ga0137391_10989309	All Organisms → cellular organisms → Bacteria	685	Open in IMG/M
3300012096\|Ga0137389_10651104	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300012189\|Ga0137388_10217030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1730	Open in IMG/M
3300012198\|Ga0137364_10182210	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1533	Open in IMG/M
3300012198\|Ga0137364_10680056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	776	Open in IMG/M
3300012199\|Ga0137383_10099310	All Organisms → cellular organisms → Bacteria	2114	Open in IMG/M
3300012199\|Ga0137383_10425117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	973	Open in IMG/M
3300012199\|Ga0137383_10799589	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300012200\|Ga0137382_10513380	All Organisms → cellular organisms → Bacteria	852	Open in IMG/M
3300012204\|Ga0137374_10145945	All Organisms → cellular organisms → Bacteria	2123	Open in IMG/M
3300012204\|Ga0137374_10446503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1016	Open in IMG/M
3300012204\|Ga0137374_10790790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	704	Open in IMG/M
3300012206\|Ga0137380_11545550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	548	Open in IMG/M
3300012207\|Ga0137381_10358951	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300012207\|Ga0137381_10954220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	740	Open in IMG/M
3300012211\|Ga0137377_10680796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	964	Open in IMG/M
3300012285\|Ga0137370_10276209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	999	Open in IMG/M
3300012285\|Ga0137370_10738439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	611	Open in IMG/M
3300012349\|Ga0137387_10961913	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300012351\|Ga0137386_10734382	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300012351\|Ga0137386_11239788	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300012357\|Ga0137384_10799472	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300012363\|Ga0137390_10313180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1551	Open in IMG/M
3300012917\|Ga0137395_10118770	All Organisms → cellular organisms → Bacteria	1778	Open in IMG/M
3300012923\|Ga0137359_10550361	All Organisms → cellular organisms → Bacteria	1015	Open in IMG/M
3300012958\|Ga0164299_11704446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	500	Open in IMG/M
3300012971\|Ga0126369_12256136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	631	Open in IMG/M
3300012976\|Ga0134076_10092897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1189	Open in IMG/M
3300012984\|Ga0164309_10101333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1818	Open in IMG/M
3300012987\|Ga0164307_10298783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1147	Open in IMG/M
3300013308\|Ga0157375_10865778	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1049	Open in IMG/M
3300014166\|Ga0134079_10053677	All Organisms → cellular organisms → Bacteria → Proteobacteria	1425	Open in IMG/M
3300015052\|Ga0137411_1088095	All Organisms → cellular organisms → Bacteria	677	Open in IMG/M
3300015195\|Ga0167658_1085994	All Organisms → cellular organisms → Bacteria → Proteobacteria	702	Open in IMG/M
3300015195\|Ga0167658_1111557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	563	Open in IMG/M
3300015245\|Ga0137409_10444630	All Organisms → cellular organisms → Bacteria	1115	Open in IMG/M
3300017654\|Ga0134069_1257516	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300017656\|Ga0134112_10188309	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300017659\|Ga0134083_10020479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2328	Open in IMG/M
3300017659\|Ga0134083_10034149	All Organisms → cellular organisms → Bacteria → Proteobacteria	1867	Open in IMG/M
3300018054\|Ga0184621_10002673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	4591	Open in IMG/M
3300018433\|Ga0066667_12251427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	509	Open in IMG/M
3300018482\|Ga0066669_10950878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	773	Open in IMG/M
3300018482\|Ga0066669_11124258	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	709	Open in IMG/M
3300018482\|Ga0066669_11376047	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300018482\|Ga0066669_11819064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	564	Open in IMG/M
3300020004\|Ga0193755_1029349	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
3300024290\|Ga0247667_1086065	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	578	Open in IMG/M
3300024330\|Ga0137417_1504300	All Organisms → cellular organisms → Bacteria	5380	Open in IMG/M
3300025916\|Ga0207663_11296043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300025942\|Ga0207689_11343202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	600	Open in IMG/M
3300026277\|Ga0209350_1027576	All Organisms → cellular organisms → Bacteria → Acidobacteria	1712	Open in IMG/M
3300026298\|Ga0209236_1113589	All Organisms → cellular organisms → Bacteria	1203	Open in IMG/M
3300026301\|Ga0209238_1035597	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1833	Open in IMG/M
3300026304\|Ga0209240_1295494	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	502	Open in IMG/M
3300026313\|Ga0209761_1074748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1781	Open in IMG/M
3300026318\|Ga0209471_1280117	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	557	Open in IMG/M
3300026319\|Ga0209647_1019317	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → environmental samples → uncultured beta proteobacterium	4260	Open in IMG/M
3300026320\|Ga0209131_1006637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	7408	Open in IMG/M
3300026320\|Ga0209131_1342554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Usitatibacteraceae → Usitatibacter → Usitatibacter palustris	555	Open in IMG/M
3300026325\|Ga0209152_10142839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	911	Open in IMG/M
3300026325\|Ga0209152_10396074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	540	Open in IMG/M
3300026333\|Ga0209158_1026041	All Organisms → cellular organisms → Bacteria	2573	Open in IMG/M
3300026333\|Ga0209158_1159307	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300026536\|Ga0209058_1175950	All Organisms → cellular organisms → Bacteria	949	Open in IMG/M
3300026536\|Ga0209058_1334009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	523	Open in IMG/M
3300026550\|Ga0209474_10347270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	834	Open in IMG/M
3300027748\|Ga0209689_1031941	All Organisms → cellular organisms → Bacteria → Proteobacteria	3122	Open in IMG/M
3300027846\|Ga0209180_10144670	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300027862\|Ga0209701_10706485	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300027903\|Ga0209488_10063363	All Organisms → cellular organisms → Bacteria → Proteobacteria	2733	Open in IMG/M
3300027903\|Ga0209488_10248336	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300028536\|Ga0137415_10335285	All Organisms → cellular organisms → Bacteria	1316	Open in IMG/M
3300028536\|Ga0137415_10872545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	710	Open in IMG/M
3300031366\|Ga0307506_10129032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	863	Open in IMG/M
3300031720\|Ga0307469_11265383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	699	Open in IMG/M
3300031819\|Ga0318568_10775170	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300031820\|Ga0307473_10572698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	775	Open in IMG/M
3300031820\|Ga0307473_10751397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	690	Open in IMG/M
3300032180\|Ga0307471_100178882	All Organisms → cellular organisms → Bacteria → Proteobacteria	2089	Open in IMG/M
3300032180\|Ga0307471_101019168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	995	Open in IMG/M
3300032205\|Ga0307472_101042422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	769	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.65%
Host-Associated	Host-Associated	9.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.21%
Plants	Host-Associated → Plants	9.35%
Aquatic	Environmental → Aquatic	1.44%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.63%
Sediment	Environmental → Aquatic → Sediment	1.44%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	81.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.63%
Loam	Environmental → Terrestrial → Soil → Loam	7.91%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	44.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.63%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	5.76%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.44%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.44%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	30.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	17.99%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	12.23%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.47%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.47%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.44%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	1.44%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.44%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.72%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002906	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005569	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09182015	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015195	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026319	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_102531732	3300001661	Forest Soil	MLTDGQRFYTEVHRVPANRNYDTPVRRLVREREALKVVNAQEAIDDYDKWLDLYKRIIVDRSQH*
JGI25385J37094_101137241	3300002558	Grasslands Soil	PSNKNYDTAVRRLVRERQALKVVNALEAIDDYDKWLDLYKRIIVDRSQH*
JGI25614J43888_101855501	3300002906	Grasslands Soil	NKNYDTPVRRLVRERQALKIVNAQEAIDDYEKWLDLYKRVIVDRSQH*
JGI25616J43925_102954203	3300002917	Grasslands Soil	ALFYDYMLTDGQKFYTEVYRVPANKNYDTHVRRLVRERHPIKVVNAHXAIDDYDKWHALYKKLIVXRSQH*
Ga0066672_102514931	3300005167	Soil	DVHRVPANKNYDTPVRRLVRERRAVEIVNAQEAIDDYERWYELYKRIVVDRSQH*
Ga0066679_100980383	3300005176	Soil	HRVPANKNYDTAVRRLVREHQALKVVNAQEAIDDYDKWLDLYKRIIVDRSQH*
Ga0066688_108215712	3300005178	Soil	ANKNYDTHVRRLVRERHPIKVVNAQEAIDDYDKWHALYKKLIVDRSQH*
Ga0066684_105622643	3300005179	Soil	RFYLQVNRVPANKNYDTPVRRLVAEREPIQVVNSQEAIDDYDKWHGLYKRLIVDRSQN*
Ga0066678_104199742	3300005181	Soil	NKNYDTPVRRLVRERQAVKIVNAQEAIDDYEKWHDLYKRIIVDRSQH*
Ga0070701_110070983	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	CEYMLGEGQKLYPEVDRVPANRNFDTAVRRMLREGIAVKVVDSRKAIDDYDKWLRLYKRLVVDRSQH*
Ga0070694_1003759171	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	HAAALFYDYLLTDGQRFHVEVNRVPANRNYDSAVRRLVREGKPLKIVNAQETIDDFDKWQAIYKKLIVDRSQH*
Ga0070708_1016202742	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SYDTPVRRLVRAGQAYRIVNSQQPVDDYDKWLRLYKKLIVDKSRH*
Ga0066689_110268432	3300005447	Soil	PANRNYDSPVRRLVREQQPVKVVNSGEAIDDYERWHGLYKRLIVDRSQH*
Ga0070698_1014267122	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	PVRRLIAEGYPIRVVSAHEAIDDYEKWHALYKRLIVDRSQH*
Ga0070741_102359621	3300005529	Surface Soil	YTEVHRVPANKTYDTHVRRLVREGRPIAVVDAHAAIDDYDKWHSLYKKLIVDRSQN*
Ga0070693_1009089881	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	QKFYTEVYRVPANKNYDTHVRKLVEQKQPIAVVDAHEAIDDYDKWQGLYKKLIVDRSTH*
Ga0066661_106877781	3300005554	Soil	YMLTDGQRFYTEVHRVPANKSYDTHVRRLVREGRSIAVVDAHAAIDDYDKWHSLYKKLIVDRSQQ*
Ga0066704_100941651	3300005557	Soil	FYTEVHRVPANKNYDTAVRRLVRERQALKVVNALEAIDDYDKWLDLYKRIIVDRSQH*
Ga0066700_100665243	3300005559	Soil	EVHRVPANKNYDTPVRHLMRERQAVKIVNAREAIDDYEKWLDLYKRIIVDRSQH*
Ga0066705_107959331	3300005569	Soil	AALFYDYMLTEGQKFYTEVYRVPANKSYDTHVRKLVEQKQPIAVVNAQEAIDDYDKWHGLYKKLIVDRSTH*
Ga0066702_103548913	3300005575	Soil	LFYDYMLSDGQRFYLEVNRVPANKTYDTPVRRLVQERQPIRVVNSQEAIDDYDKWQGLYKRLIVDRSQN*
Ga0066905_1011776842	3300005713	Tropical Forest Soil	HRVPANKNYDSPVRRLVREHRTYRVVNAQIAIDDYEKWQDLYKRIIVDRSQH*
Ga0066651_102438271	3300006031	Soil	LFYDYMLTDGQKFYTEVYRVPANKGYDTHVRKLVEEKQPIAVVNAHEAIDDYDKWHGLYKKLIVDRSTH*
Ga0066696_104603381	3300006032	Soil	VEQKQPIAVVDAHEAIDDYDKWHGLYKKLIVDRSTH*
Ga0066696_110389451	3300006032	Soil	YDYMLTDGQKFYTEVYRVPANKNYDTHVRRLVRERHPIAVVNAHQAIDDYDKWHGLYKKLIVDRSQH*
Ga0075023_1003305091	3300006041	Watersheds	YDTPVRRLVRDRQAVRIVNAQEAIDDYEKWHDLYKRIIVDRSQN*
Ga0070715_105154292	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MLTDGQRIYTEMHRVPANKAYDTPVSRLVRDRQPYKVVDARRTVDDYDKWLRLYRKLIVDRSRH*
Ga0070716_1017886521	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PANKNYDTHVRRFVREGREIAVVNAQSAIDDYDKWQGLYKKLIVDRSQN*
Ga0070712_1019044052	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	DGQRIYTEMHRVPANKAYDTPVSRLVRDRQPYKVVDARRTVDDYDKWLRLYRKLIVDRSRH*
Ga0066653_100958853	3300006791	Soil	FYMEVHRVPANKNYDTPVRRLVRERQAVKIVNAQEAIDDYEKWLDLYKRIIVDRSQH*
Ga0066660_107407483	3300006800	Soil	LTDGQRFYTEVHRVPANKNYDTPVRRLVSDRQAIKIVNAQEAIDDYEKWLDLYKRIIVDRSQH*
Ga0079220_109504461	3300006806	Agricultural Soil	PANKNYDTHVRKLVEQKQPIAVVDAHEAIDDYEKWQALYKKLIVDRSTH*
Ga0075425_1019060222	3300006854	Populus Rhizosphere	YRVPANKNYDTHVRRFVREGREIAVVNAQSAIDDYDKWQSLYKKLIVDRSQN*
Ga0075425_1023022812	3300006854	Populus Rhizosphere	HVRRFVREGREIAVVNAHESIDNYDKWQSLYKKLIVERSQN*
Ga0075426_107201611	3300006903	Populus Rhizosphere	TDGQRFYTEVHRVPANKNYDTHVRRLVREGAAIAVVDAQSAIDDYDQWQALYRKLIVERSTH*
Ga0075424_1016257952	3300006904	Populus Rhizosphere	ANKNYDTPVRRLVRERQAVKVVNAQEAIDDYEKWLDLYKRVIVDRSQH*
Ga0075424_1023784111	3300006904	Populus Rhizosphere	FHDYMLSDGQRFHTEVHRVPANRNYDSPVRRLVHEHQPVRVVNSGEAIDDYEKWHGLYKRLIVDRSQH*
Ga0075436_1000087771	3300006914	Populus Rhizosphere	VPANKNYDTHVRRFVREGREIAVVNAQSAIDDYDKWQSLYKKLIVDRSQN*
Ga0075436_1005652001	3300006914	Populus Rhizosphere	RKLVEQKQPIAVVDAHEAIDDYDKWHGLYKKLIVDRSTH*
Ga0075435_1012970972	3300007076	Populus Rhizosphere	VNRVPANKSYDSPVRRLVRERQAIKVVNSQEAIDDYDKWHSLYKRLIVDRSQN*
Ga0099791_102308492	3300007255	Vadose Zone Soil	YDTAVRRLVRERKALKLVNAQEAIDDYKKWLDLYKRIIVDRSQH*
Ga0099793_100973711	3300007258	Vadose Zone Soil	RVPANKNYDTPVRRLVRERQALRVVNAQEAIDDYDKWLDLYKRIIVDRSQH*
Ga0099793_103749391	3300007258	Vadose Zone Soil	RCVPANSNYNTAVRSLVREAQAVKIANAQEAIDDYEKWYDLYKRIIVDRSQH*
Ga0066710_1007240721	3300009012	Grasslands Soil	THVRKLVEQKQPIAVVNAQEAIDDYDKWHGLYKKLIVDRSTH
Ga0099828_103836781	3300009089	Vadose Zone Soil	HRVPANKNYDTPVRRLVRERQAVRIVNAQEAIDDYEKWHDLYKRIIVDRSQH*
Ga0099828_112548121	3300009089	Vadose Zone Soil	VRRLVREGHPITVVNAHQVIDDYEKWHDLYKRLIVDRSQH*
Ga0099827_105218002	3300009090	Vadose Zone Soil	MLTEGQRFYTEVHRVPANRNYDTPVRRLVRERQAVKIVNAQEAIDDYEKWHGLYKRIIVDRSEH*
Ga0099792_112030851	3300009143	Vadose Zone Soil	MLTDGQRFYTEVHRVPANRNYDTPVRRLVREREALKVVNAQEAIDDYDKWLDLYKRIVVDRSQH*
Ga0075423_118862633	3300009162	Populus Rhizosphere	YDTPVRRLVRERQPVKVVNVQKTIDDYERWQRLYKRLIVDRSQH*
Ga0075423_121669752	3300009162	Populus Rhizosphere	DTPVRRLVGEGRPLAVVDAHAAIDEHDKWHSLYKKLIVDRSQN*
Ga0105237_113194692	3300009545	Corn Rhizosphere	MLTDGQRLYPGMFRVPAAKSLDSPVRALLARGGAYTIVNAQLGVDDYDKWLRSYKKLIVDRSTH*
Ga0134070_104004322	3300010301	Grasslands Soil	NYDTHVRRLVRERHPIAVVNAHEAIDDYDKWHGLYKKLIVDRSQH*
Ga0134067_101995151	3300010321	Grasslands Soil	NKNYDTPVRRLVAERQPIRVVNSQEAIDDYDKWHGLYKKLIVDRSQQ*
Ga0134080_101159171	3300010333	Grasslands Soil	DYMLTDGQRFYTEVHRVPANKNYDTPVRRLVRERQAVKIVNAQETTDDYEKWLDLYKRIVVDRSQH*
Ga0134127_119930621	3300010399	Terrestrial Soil	LSDGQRFHVEVNRVPANRNYDSPVRRLVRDRQPIKVVNSQEAIDDYDKWHGFYKKLIVDRSQF*
Ga0134121_104330133	3300010401	Terrestrial Soil	YLLSDGQRFHVEVNRVPANRNYDSPVRRLVRDRQPIKVVNSQEAIDDYDKWHGFYKKLIVDRSQF*
Ga0137392_101488063	3300011269	Vadose Zone Soil	MLTDGQRFYMEVHRVPANKNYDTAVRRLVRERQALKVVNVQEAIDDYEKWLDLYKRIIVDRSQH*
Ga0137391_109893092	3300011270	Vadose Zone Soil	QRFYMEVHRVPANKNYDTPVRRLVRERQAVKIVNAQETIDDYEKWLDLYKRIIVDRSQH*
Ga0137389_106511042	3300012096	Vadose Zone Soil	YDYMLTEGQGFYTEVHRVPANRNYDTPVRRLVRERQAVRIVNAQEAIDDYEKWHDLYKRIIVDQSQN*
Ga0137388_102170301	3300012189	Vadose Zone Soil	YDTPVRRLVREGHPITVVNAHQVIDDYEKWHDLYKRLIVDRSQH*
Ga0137364_101822101	3300012198	Vadose Zone Soil	YDTPVRRLVRERQAVEIVNAQEAIDDYEKWYDLYKRIIVDRSQH*
Ga0137364_106800562	3300012198	Vadose Zone Soil	DYMLTEGQRFYTDVHRVPANKNYDTPVRRLVRERQAVEIVNAREAIDDYEKWYDLYKRIVVDRSQH*
Ga0137383_100993103	3300012199	Vadose Zone Soil	EGQRFYTEVHRVPANRNYDTPVRRLVRERQAVKIVNAQEAIDDYEKWLDLYKRIIVDRSQH*
Ga0137383_104251172	3300012199	Vadose Zone Soil	NYDTPVRRLVRERQAVKIVNAQEAIDDYEKWHDLYKRIIVDRSQH*
Ga0137383_107995892	3300012199	Vadose Zone Soil	LTEGQRFYTEVHRVPANRNYDTPVRRLVRERQAVKIVNAQEAIDDYEKWHDLYKRIIVDRSQH*
Ga0137382_105133802	3300012200	Vadose Zone Soil	TEVHRVPANKNYDTPVRRLLRERQAVKIVNAQEAIDDYEKWLDLYKRIIVDRSQH*
Ga0137374_101459454	3300012204	Vadose Zone Soil	FYTEVHRVPANRNYDTPVRRLVRERQAVKIVNAQEAIDDYEKWHDLYKRIIVDRSQH*
Ga0137374_104465031	3300012204	Vadose Zone Soil	KNYDTHVRRLVRDGRPIKVVNSQEAIDDYEKWHGLYKKLIVDRSQH*
Ga0137374_107907902	3300012204	Vadose Zone Soil	EVHRVPANRNYDTPVRRLVRERQAVKIVNAQEAIDDYEKWHDLYKRIIVDRSQH*
Ga0137380_115455501	3300012206	Vadose Zone Soil	DYMLTEGQRFYTEVHRVPANKNFDTPVRRLVQARQAFKTVNVQQAIDDYDKWQALYESIIVDRSRH*
Ga0137381_103589511	3300012207	Vadose Zone Soil	KNYDTPVRRLVRERQAVKVVNAQETIDDYEKWLDLYKRTIVDRSQH*
Ga0137381_109542201	3300012207	Vadose Zone Soil	VHRVPSNKKYYTHVRRLVRDGNPIKVVNSQEAVDDYEKWHALYKRLIVDRSQH*
Ga0137377_106807961	3300012211	Vadose Zone Soil	VHRVPANRNYDTPVRRLVRERQAVKIVNAQEAIDDYEKWHDLYKRIIVDRSQH*
Ga0137370_102762091	3300012285	Vadose Zone Soil	NKNYDTPVRRLVRERQAVEIVNAQEAIDDYEKWYELYKRIVVDRSQH*
Ga0137370_107384392	3300012285	Vadose Zone Soil	NKNYDTPVRRLVRERQAVEIVNAQEAIDDYEKWYDLYKRIVVDRSQH*
Ga0137387_109619132	3300012349	Vadose Zone Soil	LTDGQRFYTEVHRVPANKNYDTPVRRLVRERQAVKIVNAQEAIDDYEKWLDLYKRIIVDRSQH*
Ga0137386_107343822	3300012351	Vadose Zone Soil	NKNFDTPVRRLVQARQAFKTVNVQQAIDDYDKWQALYESIVVDRSRH*
Ga0137386_112397881	3300012351	Vadose Zone Soil	RFYTEVHRVPANRNYDTPVRRLVRERQPVRIVNAQEAIDDYEKWHDLYKRIIVDRSQH*
Ga0137384_107994722	3300012357	Vadose Zone Soil	CDYMLTEGQRFYTEVHRVPANRNYDTPVRRLVRERQPVRIVNAQEAIDDYEKWHDLYKRIIVDRSQH*
Ga0137390_103131803	3300012363	Vadose Zone Soil	LTEGQRFYTEVHRVPANRNYDTPVRRLVRERQAVKIVNAQEAIDDYEKWHDLYKRIIVDRSEH*
Ga0137395_101187703	3300012917	Vadose Zone Soil	GQRFYMEVHRVPANKNYDTPVRRLVRERQAVKVVNAQEAIDDYEKWLDLYKRVIVDRSQH
Ga0137359_105503611	3300012923	Vadose Zone Soil	MLTDGQRFYTEVHRVPANRNYDSPVRRLVREREALKVVNAQEAIDDYDKWLDLYKRTIVDRSQH*
Ga0164299_117044462	3300012958	Soil	RFYIEMFRVPANKSYDSAVRRLLREGQAFTIVNAQRGIDDYDKWLRLYKKLIVDRSQH*
Ga0126369_122561362	3300012971	Tropical Forest Soil	FYDYMLGDGQRFYTEVHRVPANRNFDTPVRRLVRERGAYVVVDSREAIDDHEKWQDLYKRTIVDRSRQ*
Ga0134076_100928971	3300012976	Grasslands Soil	RVPANKNYDTPVRRLVRERQAVEIVNAQEAIDDYQKWYDLYKRIIVDRSQH*
Ga0164309_101013331	3300012984	Soil	AAALFYDYLLSDGQRFHVEVNRVPANRNYDSPVRRLVRDRQPIKVVNSQEAIDDYDKWHGFYKKLIVDRSQF*
Ga0164307_102987832	3300012987	Soil	LFYDYMLTEGQKFYTEVYRVPANKNYDTHVRKLVEQKQPIAVVDAHEAIDDYDKWHGLYKKLIVDRSTH*
Ga0157375_108657783	3300013308	Miscanthus Rhizosphere	PANKSYDSAVRRLLREGQAFTIVNAQRGIDDYDKWLRLYKKLIVDRSQH*
Ga0134079_100536771	3300014166	Grasslands Soil	THVRKLVEEKQPIAVVNAHEAIDDYDKWHGLYKKLIVDRSTH*
Ga0137411_10880951	3300015052	Vadose Zone Soil	TEVHRVPANRNYDTPVRRLVRDHQAVKIVNAQETIDDYEKWLDLYKRIIVDRSRH*
Ga0167658_10859942	3300015195	Glacier Forefield Soil	FYTEVYRVPANKSYDTHVRKLVEQKQAIAVVNAHEAIDDYDRWHGLYKKLIVDRSTH*
Ga0167658_11115571	3300015195	Glacier Forefield Soil	RLYLEQYRVPANKAYDSPVRRMVAEGRPVKVVNAQKAIDDYDKWLRIYKRLIVDKSQH*
Ga0137409_104446302	3300015245	Vadose Zone Soil	RFYTEVHRVPANKNFDTPVRRLVRERQAVKIVNAQEAIDDYEKWHDLYKRIIVDRSQH*
Ga0134069_12575162	3300017654	Grasslands Soil	RFYTEVHRVPANKNYDTPVRRLVRERQAVKIVNAQETTDDYEKWLDLYKRIVVDRSQH
Ga0134112_101883091	3300017656	Grasslands Soil	RFYTEVHRVPANKNYDTAVRRLVRDRQALKVVNAQEAIDDYDKWLELYKRIIVDRSQH
Ga0134083_100204794	3300017659	Grasslands Soil	YDYMLTEGQRFYTDVHRVPANKNYDTPVRRLVRERQAVEIVNAQEAIDDYQKWYDLYKRIIVDRSQH
Ga0134083_100341493	3300017659	Grasslands Soil	FYTEVHRVPANKNYDTAVRRLVRDRQALKVVNAQEAIDDYDKWLELYKRIIVDRSQH
Ga0184621_100026735	3300018054	Groundwater Sediment	MEVHRVPANKNYDTPVRRLVRERQAVKIVNAQETIDDYEKWLDLYKRIIVDRSQH
Ga0066667_122514272	3300018433	Grasslands Soil	PANKNYDTPVRRLVRERQAVKIVNAQETIDDYEKWLDLYKRIIVDRSQH
Ga0066669_109508782	3300018482	Grasslands Soil	YDYMLSDGQRFYLEVNRVPASRNYDTPVRRLLEERQSIRVVNSLEAIDEYDKWQDLYKRLIVDRSQH
Ga0066669_111242581	3300018482	Grasslands Soil	YMLTDGQKFYTEVYRVPANRSYDTHVRKLVEQKQPIAVVNAQEANDDYDKWHGLYKKLIVDRSTH
Ga0066669_113760472	3300018482	Grasslands Soil	YTEVHRVPANKNYDTPVRRLVRERQAVKIVNAQETIDDYEKWLDLYKRIIVDRSQH
Ga0066669_118190641	3300018482	Grasslands Soil	DTHVRKLVEQKQPIAVVDAHEAIDDYDKWHGLYKKLIVDRSTH
Ga0193755_10293493	3300020004	Soil	FYTEVHRVPANKNYDTPVRRLVRERQAVKIVNAQEAIDDYEKWLDLYKRIVVDRSQH
Ga0247667_10860652	3300024290	Soil	YMLTEGQKFYTEVYRVPANKNYDTHVRKLVEQKQPIAVVDAHEAIDDYDKWHGLYKKLIVDRSTH
Ga0137417_15043005	3300024330	Vadose Zone Soil	MEVHRVPANKNYDTAVRPPGAGAPGPQGRECEEAIDDYEKWLDLYKRIIVDRSQH
Ga0207663_112960432	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MHRVPANKAYDTPVSRLVRDRQPYKVVDARRTVDDYDKWLRLYRKLIVDRSRH
Ga0207689_113432021	3300025942	Miscanthus Rhizosphere	MLTEGQRFYVEMFRVPANKSYDSAVRRLLREGQAFTIVNAQRGIDDYDKWLRLYKKLIVDRSQH
Ga0209350_10275761	3300026277	Grasslands Soil	PANKNYDTPVRRLVSDRQAIKIVNAQEAIDDYEKWLDLYKRIIVDRSQH
Ga0209236_11135894	3300026298	Grasslands Soil	PSNKNYDTAVRRLVRERQALKVVNALEAIDDYDKWLDLYKRIIVDRSQH
Ga0209238_10355974	3300026301	Grasslands Soil	PANKNYDTPVRRLVRERQAVEIVNAQEAIDDYEKWYDLYKRIIVDRSQH
Ga0209240_12954942	3300026304	Grasslands Soil	VPANKNYDTPVRRLVRERQALKIVNAQEAIDDYEKWLNLYKRIIVDRSQH
Ga0209761_10747481	3300026313	Grasslands Soil	TEVHRVPANKNYDTAVRRLVRERQALKVVNALEAIDDYDKWLDLYKRIIVDRSQH
Ga0209471_12801172	3300026318	Soil	QRFYTDVHRVPANKNYDTPVRRLVRERQAVEIVNAQEAIDDYEKWYDLYKRMIVDRSQH
Ga0209647_10193171	3300026319	Grasslands Soil	MLTDGQKFYTEVYRVPANKGYDTHVRKLVEQKQPIAVVNAHEAIDDYDKWHGLYKKLIVDRSTH
Ga0209131_10066379	3300026320	Grasslands Soil	MLTDGQRFYTEVHRVPANKNYDTPVRRLVRERQAVRIVNAQEAIDDYEKWLDLYKRIVVDRSQH
Ga0209131_13425541	3300026320	Grasslands Soil	FFMQVHRVPSSRSYDTPVRRLVLERRPVKVVNAREAIDDYEKWQRLYQRLVVDRSQH
Ga0209152_101428392	3300026325	Soil	DYMLSDGQRFYLEVNRVPASRNYDTPVRRLLEERQSIRVVNSLEAIDEYDKWQDLYKRLIVDRSQH
Ga0209152_103960742	3300026325	Soil	ALFYDYMLTEGQRFYTDVHRVPANKNYDTPVRRLVRERQAVEIVNAQEAIDDYEKWYDLYKRMIVDRSQH
Ga0209158_10260411	3300026333	Soil	DYDTAVRRLVRERQALKVVNAQEAIDDYDKWLELYKRIIVDRSQH
Ga0209158_11593071	3300026333	Soil	RVPANKNYDTPVRRLVRERQAVKVVNAQEAIDDYEKWLDLYKRVIVDRSQH
Ga0209058_11759502	3300026536	Soil	VHRVAANKNYDTAVRRLLRDRQALKVVNAQEAIDDYDKWLELYKRIIVDRSQH
Ga0209058_13340091	3300026536	Soil	DYMLTDGQKFYTEVYRVPANKNYDTHVRRLVRERHPIAVVNAHEAIDDYDKWHGLYKKLIVDRSQH
Ga0209474_103472703	3300026550	Soil	VEQKQPIAVVDAHEAIDDYDKWHGLYKKLIVDRSTH
Ga0209689_10319414	3300027748	Soil	DGQRFYTEVHRVPANKNYDTPVRHLMRERQAVKIVNAREAIDDYEKWLDLYKRIIVDRSQ
Ga0209180_101446701	3300027846	Vadose Zone Soil	YDTPVRRLVRERQPVKIVNAQEAIDDYEKWHDLYKRIIVDRSQH
Ga0209701_107064852	3300027862	Vadose Zone Soil	RNYDTPVRRLVRERQAVKIVNAQEAIDDYEKWLDLYKRIIVDRSQH
Ga0209488_100633631	3300027903	Vadose Zone Soil	PANKNYDTHVRRLVRERHPIKVVNAHEAIDDYDKWHALYKKLIVDRSQH
Ga0209488_102483362	3300027903	Vadose Zone Soil	MLTEGQRFYTEVNRVPANRKYDTPVRRLGTEGRPIKVVNSREAIDDYEKWHRLYKALIVDRSQH
Ga0137415_103352851	3300028536	Vadose Zone Soil	MLTEGQRFYTEVHRVPANRNYDTPVRRLVRERQAVKIVNAQEAIDDYEKWLDLYKRIIVDRSQH
Ga0137415_108725451	3300028536	Vadose Zone Soil	VEVNRVPANRNYESPVRRLVREAQAIKVVNAHEAIDDYDKWHGLYKKLIVDRSQH
Ga0307506_101290321	3300031366	Soil	SYDTHVRKLVEQKQPIAVVNAQEAIDDYDKWQSLYKKLIVDRSTH
Ga0307469_112653832	3300031720	Hardwood Forest Soil	HRVPANKNYDTPVRRLVQERAAYKIVNAQEAIDEYEKWHDLYKRIIVDRSQH
Ga0318568_107751701	3300031819	Soil	VHRVPANKTYDTPVRRMARDGQSIKVVDSGKIIDDYDRWLRAYKKLIVDRSQH
Ga0307473_105726982	3300031820	Hardwood Forest Soil	QRFYTQVHRVPANKNYDTPVRRLIREGGAYAVVNAREAIDDYEKWQDLYKRIIVDRSQH
Ga0307473_107513971	3300031820	Hardwood Forest Soil	MLTEGQRFYTEMHRVPANKNYDTPVRRLFQERAAYKIVNAQEAIDDYEKWHDLYKRIIVDRSQH
Ga0307471_1001788821	3300032180	Hardwood Forest Soil	YMLSDGQRFYTQVHRVPANKNYDTPVRRLIREGGAYAVVNAREAIDDYEKWQDLYKRIIVDRSQH
Ga0307471_1010191682	3300032180	Hardwood Forest Soil	YDTHVRKLVEQKQPIAVVNAQEAIDDYDKWHGLYKKLIVDRSTH
Ga0307472_1010424221	3300032205	Hardwood Forest Soil	KNYDTPVRRLFQERAAYKIVNAQEAIDDYEKWHDLYKRIIVDRSQH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F055233

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences