Metagenome Family F055338

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055338
Family Type	Metagenome
Number of Sequences	138
Average Sequence Length	75 residues
Representative Sequence	MNPGAVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQ
Number of Associated Samples	58
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	47.83 %
% of genes near scaffold ends (potentially truncated)	47.10 %
% of genes from short scaffolds (< 2000 bps)	91.30 %
Associated GOLD sequencing projects	49
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (68.841 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (48.551 % of family members)
Environment Ontology (ENVO)	Unclassified (83.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (65.217 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 67.92% β-sheet: 0.00% Coil/Unstructured: 32.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF01520	Amidase_3	24.64
PF08840	BAAT_C	2.17
PF05869	Dam	1.45
PF13356	Arm-DNA-bind_3	0.72
PF03102	NeuB	0.72
PF00501	AMP-binding	0.72
PF09374	PG_binding_3	0.72
PF02945	Endonuclease_7	0.72
PF13476	AAA_23	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0860	N-acetylmuramoyl-L-alanine amidase	Cell wall/membrane/envelope biogenesis [M]	24.64
COG2089	Sialic acid synthase SpsE, contains C-terminal SAF domain	Cell wall/membrane/envelope biogenesis [M]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.84 %
All Organisms	root	All Organisms	31.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.84 %
cellular organisms	root	All Organisms → cellular organisms	31.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.84 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.01 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.17 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.22 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	1.45 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.45 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.72 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.84 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	15.22 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	1.45 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.45 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.84 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	12.32 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2.17 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.45 %
Bacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales	1.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.84 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	12.32 %
unclassified Hyphomicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae	2.17 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.45 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.84 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2.17 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.45 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.72 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.84 %
Hyphomicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2.17 %
Bacillaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1.45 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.45 %
Bradyrhizobium sp. C-145	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. C-145	0.72 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.72 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.72 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005764\|Ga0066903_100344123	All Organisms → cellular organisms → Bacteria	2404	Open in IMG/M
3300005764\|Ga0066903_100667193	All Organisms → cellular organisms → Bacteria	1823	Open in IMG/M
3300005764\|Ga0066903_102569477	Not Available	987	Open in IMG/M
3300005764\|Ga0066903_102775620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	950	Open in IMG/M
3300005764\|Ga0066903_103560970	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300005764\|Ga0066903_106689164	Not Available	600	Open in IMG/M
3300010048\|Ga0126373_10015442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6322	Open in IMG/M
3300010048\|Ga0126373_10710441	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. C-145	1064	Open in IMG/M
3300010361\|Ga0126378_10005022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	10227	Open in IMG/M
3300010376\|Ga0126381_100026985	All Organisms → cellular organisms → Bacteria	6805	Open in IMG/M
3300010376\|Ga0126381_100296434	Not Available	2212	Open in IMG/M
3300010376\|Ga0126381_105022488	Not Available	507	Open in IMG/M
3300010398\|Ga0126383_10618011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1156	Open in IMG/M
3300012971\|Ga0126369_10404117	All Organisms → cellular organisms → Bacteria → Proteobacteria	1404	Open in IMG/M
3300016270\|Ga0182036_11545022	Not Available	558	Open in IMG/M
3300016294\|Ga0182041_10054733	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	2723	Open in IMG/M
3300016294\|Ga0182041_10122116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1958	Open in IMG/M
3300016294\|Ga0182041_10185765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1642	Open in IMG/M
3300016294\|Ga0182041_10515543	Not Available	1039	Open in IMG/M
3300016294\|Ga0182041_10831733	Not Available	826	Open in IMG/M
3300016294\|Ga0182041_12053443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	533	Open in IMG/M
3300016319\|Ga0182033_10285655	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1356	Open in IMG/M
3300016319\|Ga0182033_11390051	Not Available	632	Open in IMG/M
3300016319\|Ga0182033_11810918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	554	Open in IMG/M
3300016341\|Ga0182035_10611603	Not Available	942	Open in IMG/M
3300016341\|Ga0182035_11292892	Not Available	653	Open in IMG/M
3300016341\|Ga0182035_11417940	Not Available	624	Open in IMG/M
3300016341\|Ga0182035_11656332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	578	Open in IMG/M
3300016341\|Ga0182035_11861324	Not Available	545	Open in IMG/M
3300016357\|Ga0182032_10014316	Not Available	4425	Open in IMG/M
3300016357\|Ga0182032_10202101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1513	Open in IMG/M
3300016357\|Ga0182032_10456424	Not Available	1044	Open in IMG/M
3300016357\|Ga0182032_10613466	Not Available	906	Open in IMG/M
3300016357\|Ga0182032_10858249	Not Available	770	Open in IMG/M
3300016357\|Ga0182032_10921313	Not Available	743	Open in IMG/M
3300016357\|Ga0182032_11593182	Not Available	568	Open in IMG/M
3300016371\|Ga0182034_10905293	All Organisms → cellular organisms → Bacteria	759	Open in IMG/M
3300016371\|Ga0182034_11225661	Not Available	653	Open in IMG/M
3300016387\|Ga0182040_10129755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1764	Open in IMG/M
3300016387\|Ga0182040_11453509	Not Available	581	Open in IMG/M
3300016404\|Ga0182037_10315394	Not Available	1262	Open in IMG/M
3300016404\|Ga0182037_10393707	All Organisms → cellular organisms → Bacteria → Proteobacteria	1140	Open in IMG/M
3300016404\|Ga0182037_10925954	Not Available	757	Open in IMG/M
3300016404\|Ga0182037_11052896	Not Available	710	Open in IMG/M
3300016422\|Ga0182039_12050942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	526	Open in IMG/M
3300016422\|Ga0182039_12080946	Not Available	523	Open in IMG/M
3300016422\|Ga0182039_12234911	Not Available	505	Open in IMG/M
3300016445\|Ga0182038_10221710	Not Available	1503	Open in IMG/M
3300016445\|Ga0182038_12072590	Not Available	515	Open in IMG/M
3300021560\|Ga0126371_10025126	All Organisms → cellular organisms → Bacteria → Proteobacteria	5532	Open in IMG/M
3300021560\|Ga0126371_10304357	Not Available	1722	Open in IMG/M
3300021560\|Ga0126371_10485049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1383	Open in IMG/M
3300021560\|Ga0126371_10525785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae	1331	Open in IMG/M
3300021560\|Ga0126371_10560093	All Organisms → cellular organisms → Bacteria → Proteobacteria	1292	Open in IMG/M
3300021560\|Ga0126371_10966285	Not Available	994	Open in IMG/M
3300021560\|Ga0126371_11227681	All Organisms → cellular organisms → Bacteria → Proteobacteria	885	Open in IMG/M
3300021560\|Ga0126371_11228966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	885	Open in IMG/M
3300021560\|Ga0126371_11879300	Not Available	718	Open in IMG/M
3300031543\|Ga0318516_10020707	Not Available	3354	Open in IMG/M
3300031544\|Ga0318534_10799849	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300031545\|Ga0318541_10185590	Not Available	1149	Open in IMG/M
3300031545\|Ga0318541_10382213	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300031546\|Ga0318538_10178271	Not Available	1130	Open in IMG/M
3300031546\|Ga0318538_10689105	Not Available	554	Open in IMG/M
3300031546\|Ga0318538_10817695	Not Available	506	Open in IMG/M
3300031572\|Ga0318515_10222242	Not Available	1013	Open in IMG/M
3300031573\|Ga0310915_10056934	Not Available	2542	Open in IMG/M
3300031573\|Ga0310915_10254934	Not Available	1235	Open in IMG/M
3300031573\|Ga0310915_10510921	Not Available	853	Open in IMG/M
3300031573\|Ga0310915_10596382	Not Available	783	Open in IMG/M
3300031573\|Ga0310915_10596573	Not Available	783	Open in IMG/M
3300031668\|Ga0318542_10266900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	873	Open in IMG/M
3300031679\|Ga0318561_10151729	Not Available	1244	Open in IMG/M
3300031679\|Ga0318561_10284693	Not Available	903	Open in IMG/M
3300031679\|Ga0318561_10565401	Not Available	626	Open in IMG/M
3300031681\|Ga0318572_10658086	Not Available	624	Open in IMG/M
3300031682\|Ga0318560_10173187	Not Available	1148	Open in IMG/M
3300031719\|Ga0306917_10187324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1560	Open in IMG/M
3300031719\|Ga0306917_10354157	Not Available	1141	Open in IMG/M
3300031719\|Ga0306917_11112256	Not Available	615	Open in IMG/M
3300031719\|Ga0306917_11314304	Not Available	559	Open in IMG/M
3300031736\|Ga0318501_10435500	Not Available	711	Open in IMG/M
3300031744\|Ga0306918_10151025	Not Available	1715	Open in IMG/M
3300031744\|Ga0306918_10191023	Not Available	1539	Open in IMG/M
3300031744\|Ga0306918_10543721	Not Available	910	Open in IMG/M
3300031744\|Ga0306918_10640203	Not Available	833	Open in IMG/M
3300031747\|Ga0318502_10936364	Not Available	527	Open in IMG/M
3300031748\|Ga0318492_10187495	Not Available	1055	Open in IMG/M
3300031770\|Ga0318521_10229914	Not Available	1078	Open in IMG/M
3300031779\|Ga0318566_10648641	Not Available	513	Open in IMG/M
3300031793\|Ga0318548_10157427	Not Available	1109	Open in IMG/M
3300031795\|Ga0318557_10364033	Not Available	665	Open in IMG/M
3300031833\|Ga0310917_10160072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1490	Open in IMG/M
3300031835\|Ga0318517_10045526	Not Available	1822	Open in IMG/M
3300031845\|Ga0318511_10455337	Not Available	590	Open in IMG/M
3300031846\|Ga0318512_10244101	Not Available	886	Open in IMG/M
3300031879\|Ga0306919_10305936	Not Available	1207	Open in IMG/M
3300031879\|Ga0306919_10356240	Not Available	1118	Open in IMG/M
3300031879\|Ga0306919_10584837	Not Available	861	Open in IMG/M
3300031879\|Ga0306919_10691484	Not Available	786	Open in IMG/M
3300031880\|Ga0318544_10438215	Not Available	508	Open in IMG/M
3300031890\|Ga0306925_10011340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	8576	Open in IMG/M
3300031890\|Ga0306925_10235041	All Organisms → cellular organisms → Bacteria	1976	Open in IMG/M
3300031890\|Ga0306925_10385672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1503	Open in IMG/M
3300031890\|Ga0306925_11948900	Not Available	556	Open in IMG/M
3300031897\|Ga0318520_10394468	Not Available	845	Open in IMG/M
3300031897\|Ga0318520_11068903	Not Available	511	Open in IMG/M
3300031910\|Ga0306923_11642912	Not Available	666	Open in IMG/M
3300031910\|Ga0306923_11760245	Not Available	638	Open in IMG/M
3300031912\|Ga0306921_11348254	Not Available	787	Open in IMG/M
3300031912\|Ga0306921_11670396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	690	Open in IMG/M
3300031912\|Ga0306921_11688919	Not Available	685	Open in IMG/M
3300031912\|Ga0306921_12254029	Not Available	572	Open in IMG/M
3300031942\|Ga0310916_10477409	Not Available	1062	Open in IMG/M
3300031942\|Ga0310916_10519057	Not Available	1014	Open in IMG/M
3300031945\|Ga0310913_10642226	Not Available	752	Open in IMG/M
3300031945\|Ga0310913_10911752	Not Available	618	Open in IMG/M
3300031945\|Ga0310913_11166265	Not Available	537	Open in IMG/M
3300031946\|Ga0310910_10122056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1962	Open in IMG/M
3300031947\|Ga0310909_10321558	Not Available	1298	Open in IMG/M
3300031947\|Ga0310909_10874698	Not Available	739	Open in IMG/M
3300031947\|Ga0310909_11173033	Not Available	622	Open in IMG/M
3300031954\|Ga0306926_10006528	All Organisms → cellular organisms → Bacteria	12531	Open in IMG/M
3300031954\|Ga0306926_11514360	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300031954\|Ga0306926_12649673	Not Available	546	Open in IMG/M
3300031954\|Ga0306926_13028750	Not Available	501	Open in IMG/M
3300032035\|Ga0310911_10232510	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium	1053	Open in IMG/M
3300032039\|Ga0318559_10327460	Not Available	712	Open in IMG/M
3300032060\|Ga0318505_10402911	Not Available	647	Open in IMG/M
3300032067\|Ga0318524_10346091	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300032067\|Ga0318524_10689541	Not Available	539	Open in IMG/M
3300032076\|Ga0306924_11071465	Not Available	880	Open in IMG/M
3300032076\|Ga0306924_11476989	Not Available	722	Open in IMG/M
3300032076\|Ga0306924_11881199	Not Available	621	Open in IMG/M
3300032076\|Ga0306924_12359669	Not Available	538	Open in IMG/M
3300032261\|Ga0306920_101092681	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300032261\|Ga0306920_102701443	Not Available	678	Open in IMG/M
3300033289\|Ga0310914_10556141	Not Available	1036	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.65%
Loam	Environmental → Terrestrial → Soil → Loam	4.35%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	83.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	48.55%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.78%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	12.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.35%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031880	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066903_1003441233	3300005764	Tropical Forest Soil	MNPGLVEEGAKVAGGVVEGLKSQPLSLALIIMNVVFIGFAVFVLQSLNARTVHQYEVKDALIAKLIEQCRGAQSTQQ*
Ga0066903_1006671934	3300005764	Tropical Forest Soil	MNGAVEEGAKVAGGIVEGLKSQPLSLALIVMNLIFVGFAWLILDQLNTRTTRQYEVKDQLIARLIDKCRDPQSTQQ*
Ga0066903_1025694772	3300005764	Tropical Forest Soil	MAPGAVEESAKVASGVVEGLRHQPLALALVVMNVIFVLFVGWLGHEFNQRTTHQYEVKDQLIAKLIDKCRDQQQSTQQ*
Ga0066903_1027756201	3300005764	Tropical Forest Soil	MNGPVEEGAKVAHGIIDGLKSQPLSLALIVMNLIFVGFAWLVLDQLNTRTTRQYEVKYKLIAKIIEQCNK*
Ga0066903_1035609702	3300005764	Tropical Forest Soil	VNPGPIEEGAKVATSVVDGLKAQPLALALIIMNVVFMAFAAWITHSINERTIRQFEVKDALIAKLVDQCKENPK*
Ga0066903_1066891641	3300005764	Tropical Forest Soil	MNPGAIEEGAKVASGVIEGLKSQPLSLALIVMNLIFIGFAWLVLDQLNTRTTRQYEVKDQLIAKLIDKCHDAQSTQQ*
Ga0126373_100154429	3300010048	Tropical Forest Soil	MNGAIEEGAKLASGVVEGLKAQPLSLALIVMNVVFIGFAVFVLQALNARTVHQYEVKDQLIAKLIDKCRDPQSTSQ*
Ga0126373_107104412	3300010048	Tropical Forest Soil	MNGAVEEGAKVAGSVVEGLKTQPLSLALIVVNIAFLGFVTFIVYTLNERTEHQYEVKDQLIYKLVDKCRDQQSTQQQ*
Ga0126378_100050223	3300010361	Tropical Forest Soil	MNGPIEEGAKLASGVVEGLKAQPLSLALIVMNVVFIGFAVFVLQALNARTVHQYEVKDQLIAKLIDKCRDPQSTSQ*
Ga0126381_1000269854	3300010376	Tropical Forest Soil	MNPGAIEEGAKIAGGVVEGLKSQPLSLALIVMNIMFIGFAVFVLQALNARTVHQYEVKDQLIAKLIDKCRDPQSTSQ*
Ga0126381_1002964341	3300010376	Tropical Forest Soil	VTAVEEGAKVAGGIVEGLKSQPLSLALIVINLVFVGFAMFVLNDISARTSRQYEVKDQLIAKLI
Ga0126381_1050224881	3300010376	Tropical Forest Soil	MNPGAVEEGAKVATGVVEGLKSQPLSLALIIMNLLFVLFVAWLANEFNQRTTHQYEVKDQLIAKLIDKCRDQQQSTQQ*
Ga0126383_106180112	3300010398	Tropical Forest Soil	MNPGAIEEGAKVASGVVEGLKQQPLALALIIMNVVFIAFAVWVLQSLNARTVHQYEVKDQLIAKLIEQCKDGKQGAVQ*
Ga0126369_104041173	3300012971	Tropical Forest Soil	MNGAIQEGAKVAGGIVEGLKSQPLSLALIVMNIIFIGFAVWVLQSLNARTVRQYEVKDQLIAKLVDKCRDAQSTQQ*
Ga0182036_115450223	3300016270	Soil	EGAKVAGGVVEGLKSQPLSLALIVLNLVFVGFVAWLASEFNARTTHQYEVKDQLIARLIDKCGNSQQSQLP
Ga0182041_100547335	3300016294	Soil	MSPGPVEEGAKVATSVVEGLKSQPLSLALIVVNLVFVLFVGWLAHEFNERTINQYAVKDQLIAKLLDQCKASQQSQQ
Ga0182041_101221161	3300016294	Soil	VPVADAVEMSPAVEEGAKVASGVVEGLKSQPLSLALVVLNLIFILFMAWLANQFNTRTNHQYEVKDQLIARLIDKCGNSQQSQQQ
Ga0182041_101857651	3300016294	Soil	ATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQQ
Ga0182041_105155431	3300016294	Soil	MSGPVEEGAKVATSVVEGLRSQPLSLALIVVNLVFVVFVGWLAHEFNQRTISQYAIKDALIAKLLDECKP
Ga0182041_108317332	3300016294	Soil	MSGAVEQGAAVAKGVVEGLKSQPLSLALIVLNLVFVGFVAWLANEFNARTTHQYEVKDQLIARLIDKCGNSQQSQQQ
Ga0182041_120534431	3300016294	Soil	MTPGPVEEGSKVAQSVVDALKTQPLSLALITMNVVFIIFVGFLLYSLNSRTTHQYEIKDQLISKLFDQCGKPNQ
Ga0182033_102856553	3300016319	Soil	AVEEGAKVASGVVEGLKSQPLSLALVVLNLIFILFMAWLANQFNTRTNHQYEVKDQLIARLIDKCGNSQQSQQQ
Ga0182033_113900512	3300016319	Soil	MSPGPVEEGAKVATSVVEGLKSQPLSLALIVVYLVIVLFVGWLAHEFNNRTTHQYEVKDQLIAKLLDQCKPGQQSQQ
Ga0182033_118109181	3300016319	Soil	MPGAVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDALIAKLIDQCKASQQSQQQQ
Ga0182035_106116032	3300016341	Soil	VNPGGPIEEGAKVATTVVEGLRAQPLSLALIVVNLVFVGFVAWIANEFNQRTTHQYEVKDQLIARLIDQCGNNQRSQQ
Ga0182035_112928921	3300016341	Soil	TTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQ
Ga0182035_114179402	3300016341	Soil	MNPGGAVEEGAKVATGIVDGLKSQPLSLALIVLNLTFIVFTAWLAYTVNARTTHQYEVKDQLIAKLIEQCRDGKPL
Ga0182035_116563321	3300016341	Soil	GRNSDLAARMNPGPVEEGAKVATNVVEGLKSQPLSLALIVLNLVFIGFVGWLASEFNARTTHQYEVKDQLIARLIDKCRDSQQSQQQ
Ga0182035_118613243	3300016341	Soil	SMNAGPIEEGAKVAQGVIAGLKEQPLSLALIVMNLVFVGLFGWMANEFNQRTTHQYAVKDELIVKLIDKCRDPSSMQQ
Ga0182032_100143163	3300016357	Soil	MSPGPVEEGAKVAHGVVEGLKQQPLSLALIVINLVFVGFVAWLGNEFNTRTTHQYEVKDQLIAKLLDQCKTGQQSQQQ
Ga0182032_102021013	3300016357	Soil	MNPGAVEEGAKVASGVVEGLKSQPLSLALIVVNLTFIGFMGWIAHEFNQRTTHQYEVKDQLIAKLLDQCKPGQQSQQQ
Ga0182032_104564243	3300016357	Soil	MTGAVEEGAKVASGVVEGLKNQPLSLALVVLNLIFILFMAWLANQFNTRTNHQYEVKDQLIARLID
Ga0182032_106134661	3300016357	Soil	PVEEGAKVATTVVEGLKNQPLSLALIVLNVVFILFVGWLAYTFNARTNHQYEVKDQLIAKLIDQCKASQQSQQQ
Ga0182032_108582493	3300016357	Soil	MSPAVEEGAKVASGVVEGLKSQPLSLALVVLNLIFILFMAWLANQFNTRTNHQYEVKDQLIARLID
Ga0182032_109213133	3300016357	Soil	VEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQQ
Ga0182032_115931822	3300016357	Soil	MNPGGAVEEGAKVASTVVESLKGEPISLALIVMNVIFVAGIAWWAHEINIRTTHQYEVKDQLIAKLIDQCRPLNKSELE
Ga0182034_109052931	3300016371	Soil	TNRAACRSAGRNSDLAARMNPGPVEEGAKVATNVVEGLKSQPLSLALIVLNLVFIGFVGWLASEFNARTTHQYEVKDQLIARLIDKCRDSQQSQQQ
Ga0182034_112256612	3300016371	Soil	MSPGPVEEGAKVATSVVEGLKSQPLSLALIVVNLVFVLFVGWLAHEFNERTTSQYAVKDQLIAKLLDQCGKASQQSQQ
Ga0182040_101297551	3300016387	Soil	CDSNLAARMSGPVEEGAKVATSVVEGLRSQPLSLALIVVNLVFVVFVGWLAHEFNQRTISQYAIKDALIAKLLDECKPGQQSQQ
Ga0182040_114535091	3300016387	Soil	MNPGAVEEGAKVATSVVESLKGEPISLALIVMNVIFVAGIAWWAHEINIRTTHQYEVKDQLIAKLIDQCR
Ga0182037_103153941	3300016404	Soil	RTASAANCTACRSPGCNSNLAARMSPGPVEEGAKVATSVVEGLKSQPLSLALIVVNLVFVLFVGWLAHEFNERTTSQYAVKDQLIAKLLDQCKTGQQSQQ
Ga0182037_103937073	3300016404	Soil	MSPGPVEEGAKVAHGVVEGLKQQPLSLALIVINLVFVGFVAWLGNEFNQRTTHQYEVKDQLIARLLDQCKA
Ga0182037_109259542	3300016404	Soil	MTGAVEEGAKVASGVVEGLKNQPLSLALVVLNLVFVGFVAWLASEFNARTTHQYEVKDQLIARLIDKCGNSQQSQQQ
Ga0182037_110528961	3300016404	Soil	EGAKVATGVVEGLRSQPLSLALIVVNVVFVLFVAWLAHEFNTRTTRQYEIKDQLITKLIDKCGNSQQSQQ
Ga0182039_120509421	3300016422	Soil	TTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIARLIDQCKASQQSQQQQ
Ga0182039_120809461	3300016422	Soil	MNPGAIEEGAKVATGVVEGLRQQPLSLALIVVNVVFVAFFAWIANEFNQRTTHQYQVKDELIAKLIDKCRDSQQSQQ
Ga0182039_122349111	3300016422	Soil	MNPGGAVEEGAKVATSVVEGLKSQPLSLALIVVNLVFVLFVGWLANEFNQRTTHQYEVKDQLIAKLLDKCGNSQQS
Ga0182038_102217104	3300016445	Soil	MNPGAVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIARLIDQCKASQQSQQ
Ga0182038_120725901	3300016445	Soil	NPGGAVEEGAKVATGVIEGLRTQPLSLALIVVNVVFVAFFAWIANEFNARTTHQYEVKDQLIGKLIDKCRDSQQSQQ
Ga0126371_100251265	3300021560	Tropical Forest Soil	MNGAVEEGAKVAGGIVEGLKSQPLSLALIVMNLIFVGFAWLILDQLNTRTTRQYEVKDQLIARLIDKCRDPQSTQQ
Ga0126371_103043572	3300021560	Tropical Forest Soil	MNPGAVEEGAKVATGVVEGLKQQPLSLALIVMNVVFIGFAVFVLHALNERTVHQYEVKDQLIAKLIERCRDQPPQQ
Ga0126371_104850492	3300021560	Tropical Forest Soil	MNPGAIEEGAKVASGVVEGLKAQPLALALIVMNIVFIGFSVWVLQSLNARTVHQYQVKDQLIAKLIDKCRDPQSTQQ
Ga0126371_105257852	3300021560	Tropical Forest Soil	MNPGAIEEGAKVASGVIEGLKSQPLSLALIVMNLIFIGFAWLVLDQLNTRTTRQYEVKDQLIAKLIDKCHDAQSTQQ
Ga0126371_105600934	3300021560	Tropical Forest Soil	MAGPVEEGAKVATGVVDGLKQQPLSLALIVMNIVFIGFAVWVLQSLDERTVRQYEVKDQLIAKLIDKCRESQSTQQ
Ga0126371_109662852	3300021560	Tropical Forest Soil	MNGAIQEGAKVAGGIVEGLKSQPLSLALIVMNIIFIGFAVWVLQSLNARTVRQYEVKDQLIAKLVDKCRDAQSTQQ
Ga0126371_112276812	3300021560	Tropical Forest Soil	MNPGAVEETAKVAGGVVEGLKAQPLALALIVMNIVFIGFAVWVLQSLNARTSHQYEVKDALIAKLIEQCKDLSK
Ga0126371_112289662	3300021560	Tropical Forest Soil	MNPGAVEEGAKVATGVIEGLKQQPLALALIVMNVVFIGFAVWVLQSLNARTVHQYEVKDQLIAQLIDKCRDHQQQP
Ga0126371_118793002	3300021560	Tropical Forest Soil	MNGVVEEGGKVAQGVIAGLKEQPLALALIVMNVVFIGFSVFVLHELNDRTTHQYEVKDQLILKLIEQCKKGDGA
Ga0318516_100207075	3300031543	Soil	MNPGAVEEGAKVATGVVEGLKSQPLSLALIVLNLVFVLFVAWLAHEFNQRTNHQYEVKDTLIAKLIDKCRDSQQSQQQQ
Ga0318534_107998492	3300031544	Soil	MTPGPVEEGAKVASSVVEGLKGQPLSLALIAMNVIFVLFVAWLAHEFNQRTTSQYEVKDQLIAKLLDQCKTGQQ
Ga0318541_101855903	3300031545	Soil	MSPGPVEEGAKVATSVVEGLKSQPLSLALIVVNLVFVLFVGWLAHEFNERTTNQYAVKDQLIAKLLDQCKTGQQSQQQ
Ga0318541_103822133	3300031545	Soil	GCNSNLAARMSPGPVEEGAKVATSVVEGLKSQPLSLALIVVNLVFVLFVGWLANEFNNRTTHQYEVKDQLIAKLLDQCKPGQQSQQ
Ga0318538_101782713	3300031546	Soil	VVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQ
Ga0318538_106891052	3300031546	Soil	MNPGGAVEEGAKVAGSVVEGLRSQPLSLALVVMNALFILFTGWLAHEWNVRTTHQYEVKDQLIAQLIDKCRDSQRSQQ
Ga0318538_108176951	3300031546	Soil	MSPGPVEEGAKVATSVVEGLKSQPLSLALIVVNLVFVLFVGWLAHEFNERTTSQYAVKDQLIAKLLDQCKTGQQSQ
Ga0318515_102222422	3300031572	Soil	AVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQ
Ga0310915_100569343	3300031573	Soil	VSPNGAVEEGAKVATTVVEGLKSQPLSLALVVMNVVFILFTGWLAHEWNVRTTHQYEVKDQLIMRLIDQCKASQQSQQQQ
Ga0310915_102549343	3300031573	Soil	MAPGAVEEGAKVATTVVEGLRAQPLSLALIVVNLVFVGFVAWIANEFNQRTTHQYEVKDQLIARLIDQCGNSQRSQQ
Ga0310915_105109211	3300031573	Soil	PQMPGAVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQ
Ga0310915_105963822	3300031573	Soil	MTGAVEEGAKVASGVIEGLKHQPLSLALIVLNLVFVGFVAWLASEFNARTTHQYDVKDQLIARLIDKCGNSQQSQQP
Ga0310915_105965732	3300031573	Soil	MSPGPVEEGAKVATSVVEGLKSQPLSLALIVVNLVFVLFVGWLANEFNNRTTHQYEVKDQLIAKLLDQCKPGQQSQQ
Ga0318542_102669001	3300031668	Soil	VEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIARLIDQCKASQQSQQQQ
Ga0318561_101517291	3300031679	Soil	VNPGAVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQQ
Ga0318561_102846931	3300031679	Soil	VVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQQ
Ga0318561_105654013	3300031679	Soil	MSPAVEEGAKVASGVVEGLKSQPLSLALVVLNLIFILFMAWLANQFNTRTNHQYEVKDQLIARLIDKCGNSQQSQQQ
Ga0318572_106580862	3300031681	Soil	MSPGPVEEGAKVATSVVEGLKSQPLSLALIVVNLVFVLFVGWLAHEFNERTTSQYAVKDQLIAKLLDQCKTGQQSQQQ
Ga0318560_101731872	3300031682	Soil	MPGAVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQQ
Ga0306917_101873243	3300031719	Soil	RLDHAASVSDPDAVEMSPAVEEGAKVASGVVEGLKSQPLSLALVVLNLIFILFMAWLANQFNTRTNHQYEVKDQLIARLIDKCGNSQQSQQQ
Ga0306917_103541573	3300031719	Soil	MSPGPVEEGAKVATSVVEGLKSQPLSLALIVVNLVFVLFVGWLAHEFNERTTSQYAVKDQLIAKLLDQCKTGQQSQQ
Ga0306917_111122561	3300031719	Soil	PAVEEGAKVASGVVEGLKNQPLSLALVVLNLVFVGFVAWLASEFNARTTHQYEVKDQLIARLIDKCGNSQQSQQQ
Ga0306917_113143041	3300031719	Soil	SARQSSIEGQMNPGGAVEEGAKVATGVIEGLRTQPLSLALIVVNVVFVAFFAWIANEFNARTTHQYEVKDQLIGKLIDKCRDSQQSQQ
Ga0318501_104355003	3300031736	Soil	VEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQ
Ga0306918_101510252	3300031744	Soil	MPGAVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQ
Ga0306918_101910233	3300031744	Soil	MSGPVEEGAKVATSVVEGLRSQPLSLALIVVNLVFVVFVGWLAHEFNQRTISQYAIKDALIAKLLDECKPGQQSQQ
Ga0306918_105437212	3300031744	Soil	TVVEGLKSQPLSLALIVLNVVFILFVGWLAHEFNQRTNHQYETKDQLIMRLIDQCKASQQSQQQQ
Ga0306918_106402033	3300031744	Soil	MAPGAVEEGAKVATTVVEGLRAQPLSLALIVVNLVFVGFVAWIANEFNQRTTHQYEVKDQLIARLIDQCGNNQRSQQ
Ga0318502_109363642	3300031747	Soil	MSPGPVEEGAKVATSVVEGLKSQPLSLALIVVNLVFVLFVGWLAHEFNERTTNQYAVKDQLIAKLLDQCKASQQSQQ
Ga0318492_101874951	3300031748	Soil	VNPGAVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDALIAKLIDQCKASQQSQQQQ
Ga0318521_102299143	3300031770	Soil	NVNPGAVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQ
Ga0318566_106486412	3300031779	Soil	MPGAVEEGAKVATTVVEGLRNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQQ
Ga0318548_101574272	3300031793	Soil	VNPGAVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQ
Ga0318557_103640331	3300031795	Soil	MNPGPVEEGAKVATNVVEGLKSQPLSLALIVLNLVFIGFVGWLASEFNARTTHQYEVKDQLIARLIDKC
Ga0310917_101600721	3300031833	Soil	TTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQQ
Ga0318517_100455261	3300031835	Soil	MNPGAVEEGAKVATGVVEGLKSQPLSLALIVLNLVFVLFVAWLAHEFNQRTNHQYEVKDTLIAK
Ga0318511_104553373	3300031845	Soil	VVEGLKSQPLSLALIVLNLVFVLFVAWLAHEFNQRTNHQYEVKDTLIAKLIDKCRDSQQSQQQQ
Ga0318512_102441012	3300031846	Soil	VEEGAKVATGVVEGLKSQPLSLALIVLNLVFVLFVAWLAHEFNQRTNHQYEVKDTLIAKLIDKCRDSQQSQQQQ
Ga0306919_103059363	3300031879	Soil	MNPGGAVEEGAKVAGSVVEGLRSQPLSLALVVMNALFILFTGWLAHEWNVRTTHQYEVKDQLIAQLIDKCRD
Ga0306919_103562401	3300031879	Soil	MAPGAVEEGAKVATTVVEGLRAQPLSLALIVVNLVFVGFVAWIANEFNQRTTHQYEVKDQLIARLIDQ
Ga0306919_105848371	3300031879	Soil	VNPGAVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIARLIDQCK
Ga0306919_106914842	3300031879	Soil	MSPGPVEEGAKVATSVVEGLKSQPLSLALIVVNLVFVLFVGWLAHEFNERTTSQYAVKDQLIAKLLDQCKASQQSQQ
Ga0318544_104382151	3300031880	Soil	MSPGPVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQQ
Ga0306925_100113403	3300031890	Soil	VAGPVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDKCRDSQQSQQQ
Ga0306925_102350414	3300031890	Soil	MSPGPVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQ
Ga0306925_103856722	3300031890	Soil	MAPGAVEEGAKVATTVVEGLRAQPLSLALIVVNLVFVGFVAWIANEFNQRTTHQYEVKDQLIARLIDQCGTNQRSQQ
Ga0306925_119489002	3300031890	Soil	RLDHAAGVPVADAVEMSPAVEEGAKVASGVVEGLKSQPLSLALVVLNLIFILFMAWLANQFNTRTNHQYEVKDQLIARLIDKCGNSQQSQQQ
Ga0318520_103944681	3300031897	Soil	VAGPVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQ
Ga0318520_110689032	3300031897	Soil	MSPGPVEEGAKVAHGVVEGLKQQPLSLALIVINLVFVGFVAWLGNEFNQRTTHQYEVKDQLIARLLDQCKASQQSQQ
Ga0306923_116429122	3300031910	Soil	MAPGAVEEGAKVATTVVEGLRAQPLSLALIVVNLVFVGFVAWIANEFNQRTTHQYEVKDQLI
Ga0306923_117602452	3300031910	Soil	MNPGGAVEEGAKVATSVVEGLKSQPLSLALIVVNLVFVLFVGWLANEFNQRTTHQYEVKDQLIAKLLDKCGNSQQSQQP
Ga0306921_113482542	3300031912	Soil	MAPGAVEEGAKVASSVVEGLRAQPLSLALIVVNLVFVGFVAWIANEFNQRTTHQYEVKDQLIARLIDQCGNSQRSQQ
Ga0306921_116703963	3300031912	Soil	MNPGPVEEGAKVASNVVEGLKSQPLSLALIVLNLVFIGFVGWLASEFNARTTHQYEVKDQLIARLIDKCRDSQQSQQQ
Ga0306921_116889192	3300031912	Soil	MNPGAVEEGAKVATSVVESLKGEPISLALIVMNVIFVAGIAWWAHEINIRTTHQYEVKDQLIAKLIDQCRPLNKSELEHDVPR
Ga0306921_122540291	3300031912	Soil	VNPGAVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQ
Ga0310916_104774093	3300031942	Soil	MAPGAVEEGAKVATTVVEGLRAQPLSLALIVVNLVFVGFVAWIANEFNQRTTHQYEVKDQLIARLIDQCGNSQRPQQ
Ga0310916_105190572	3300031942	Soil	MNPGAVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQ
Ga0310913_106422261	3300031945	Soil	LNVNPGAVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQ
Ga0310913_109117522	3300031945	Soil	MNAGPIEEGAKVAQGVIAGLKEQPLSLALIVMNLVFVGLFGWMANEFNQRTTHQYAVKDELIVKLIDKCRDPSSMQQ
Ga0310913_111662652	3300031945	Soil	MNPGGAVEEGAKVAGSVVEGLRSQPLSLALVVMNALFILFTGWLAHEWNVRTTHQYEVKDQLIAQLIDK
Ga0310910_101220563	3300031946	Soil	VEEGAKVAGSVVEGLKSQPLSLALVVMNVVFILFTGWLAHEWNVRTTHQYEVKDQLIMRLIDQCKASQQSQQQQ
Ga0310909_103215581	3300031947	Soil	MSPGPVEEGAKVATSVVEGLKSQPLSLALIVVNLVFVLFVGWLAHEFNERTTSQYAVKDQLIAKLLDQCGKASQQSQQQ
Ga0310909_108746982	3300031947	Soil	MNPGPVEEGAKVATNVVEGLKSQPLSLALIVLNLVFIGFVGWLASEFNARTTHQYEVKDQLIARLIDKCRDSQQSQQQ
Ga0310909_111730331	3300031947	Soil	MNPGAIEEGAKVATGVVEGLRSQPLSLALIVVNVVFVLFVAWLAHEFNTRTTHQYEIKDQLITKLIDKCGNSQQSQQ
Ga0306926_1000652817	3300031954	Soil	MTPGPVEEGAKVASSVVEGLKGQPLSLALIAMNVIFVLFVAWLAHEFNQRTTSQYEVKDQLIAKLLDQCKTGQQSQQQ
Ga0306926_115143602	3300031954	Soil	VNPGAVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQ
Ga0306926_126496731	3300031954	Soil	MNPGGAVEEGAKVATSVVESLKGEPISLALIVMNVIFVAGIAWWAHEINIRTTHQYEVKDQLIAKLIDQCRPLNKSELEHDVPR
Ga0306926_130287501	3300031954	Soil	MNPGAVEEGAKVASGVVEGLKSQPLSLALIVLNLVFVGFVAWLASEFNARTTHQYEVKDQLIARLIDKCGNSQQSQLP
Ga0310911_102325104	3300032035	Soil	VEEGAKVASSVVEGLKGQPLSLALIAMNVIFVLFVAWLAHEFNQRTTSQYEVKDQLIAKLLDQCKTGQQ
Ga0318559_103274601	3300032039	Soil	TDRQSCRDDHAGAARSACMNPGAIEEGAKVATGVVEGLRSQPLSLALIVVNVVFVLFVAWLAHEFNTRTTHQYEIKDQLITKLIDKCGNSQQSQQ
Ga0318505_104029112	3300032060	Soil	AKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQ
Ga0318524_103460912	3300032067	Soil	MNPGAVEEGAKVATTVVEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDALIAKLIDQCKASQQSQQQQ
Ga0318524_106895413	3300032067	Soil	VEGLKNQPLSLALIVLNIAFILFVAWLAHEFNQRTNHQYEVKDQLIAKLIDQCKASQQSQQQ
Ga0306924_110714653	3300032076	Soil	VADAVEMSPAVEEGAKVASGVVEGLKSQPLSLALVVLNLIFILFMAWLANQFNTRTNHQYEVKDQLIARLIDKCGNSQQSQQQ
Ga0306924_114769892	3300032076	Soil	MSGPVEEGAKVATSVVEGLRSQPLSLALIVVNLVFVVFVGWLAHEFNQRTISQYAIKDALIAKLLDQCKPGQQSQQ
Ga0306924_118811991	3300032076	Soil	EEGAKVAHGVIAGLKEQPLSLALIVMNLVFVGLFGWMANEFNQRTTHQYAVKDELIVKLIDKCRDPSSMQQ
Ga0306924_123596691	3300032076	Soil	MNPGAVEEGAKVATGVVEGLKNQPLSLALIVVNVVFVFFVGFVFHTINARTIHQYEFKDDLISKLIDKC
Ga0306920_1010926812	3300032261	Soil	MSGPVEEGAKVATSVVEGLKSQPLSLALIVVNLVFVLFVGWLANEFNNRTTHQYEVKDQLIAKLLDQCKPGQQSQQ
Ga0306920_1027014433	3300032261	Soil	MNPGGAVEEGAKVATGVIEGLRTQPLSLALIVVNVVFVAFFAWIANEFNARTTHQYEVKDQLIGKLIDKCRDSQQSQQ
Ga0310914_105561411	3300033289	Soil	MSGPVEEGAKVATSVVEGLRSQPLSLALIVVNLVFVVFVGWLAHEFNQRTISQYAIKDALIAKLLDE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F055338

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences