NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F055518

Metagenome / Metatranscriptome Family F055518

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F055518
Family Type Metagenome / Metatranscriptome
Number of Sequences 138
Average Sequence Length 79 residues
Representative Sequence MVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSAVPVHKVMDYTLVDEVLKEKR
Number of Associated Samples 126
Number of Associated Scaffolds 138

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 19.57 %
% of genes near scaffold ends (potentially truncated) 79.71 %
% of genes from short scaffolds (< 2000 bps) 92.03 %
Associated GOLD sequencing projects 124
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(13.768 % of family members)
Environment Ontology (ENVO) Unclassified
(34.058 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(33.333 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 46.08%    β-sheet: 1.96%    Coil/Unstructured: 51.96%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 138 Family Scaffolds
PF14518Haem_oxygenas_2 26.81
PF03070TENA_THI-4 26.81
PF09084NMT1 5.80
PF01274Malate_synthase 4.35
PF03401TctC 1.45
PF01977UbiD 1.45
PF00135COesterase 1.45
PF00296Bac_luciferase 0.72
PF04986Y2_Tnp 0.72
PF01471PG_binding_1 0.72
PF07969Amidohydro_3 0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 138 Family Scaffolds
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 5.80
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 5.80
COG2225Malate synthaseEnergy production and conversion [C] 4.35
COG00433-polyprenyl-4-hydroxybenzoate decarboxylaseCoenzyme transport and metabolism [H] 1.45
COG2272Carboxylesterase type BLipid transport and metabolism [I] 1.45
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 1.45
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.72


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886013|SwBSRL2_contig_1976183All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1095Open in IMG/M
3300000550|F24TB_12737516All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1248Open in IMG/M
3300000559|F14TC_100610792All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2814Open in IMG/M
3300000789|JGI1027J11758_12849385All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1470Open in IMG/M
3300000890|JGI11643J12802_11792818All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium692Open in IMG/M
3300002120|C687J26616_10139606All Organisms → cellular organisms → Bacteria763Open in IMG/M
3300003993|Ga0055468_10017019All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1529Open in IMG/M
3300004027|Ga0055459_10129446All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium673Open in IMG/M
3300004061|Ga0055487_10088593All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium552Open in IMG/M
3300004480|Ga0062592_102198273All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium549Open in IMG/M
3300004778|Ga0062383_10489660All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium615Open in IMG/M
3300004779|Ga0062380_10484073All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium548Open in IMG/M
3300005183|Ga0068993_10158546All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium767Open in IMG/M
3300005218|Ga0068996_10081945All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium697Open in IMG/M
3300005332|Ga0066388_103226135All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium833Open in IMG/M
3300005332|Ga0066388_108343692All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium516Open in IMG/M
3300005545|Ga0070695_101465166All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium567Open in IMG/M
3300005548|Ga0070665_102192813All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium556Open in IMG/M
3300005553|Ga0066695_10047893All Organisms → cellular organisms → Bacteria → Proteobacteria2533Open in IMG/M
3300005713|Ga0066905_100938830All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium759Open in IMG/M
3300005836|Ga0074470_10520179All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium594Open in IMG/M
3300005841|Ga0068863_100455139All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1256Open in IMG/M
3300005843|Ga0068860_100903869All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium899Open in IMG/M
3300005844|Ga0068862_101965565All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium595Open in IMG/M
3300005879|Ga0075295_1000971All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1868Open in IMG/M
3300005937|Ga0081455_10607540All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium712Open in IMG/M
3300006844|Ga0075428_100985602All Organisms → cellular organisms → Bacteria892Open in IMG/M
3300006844|Ga0075428_102558823All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium522Open in IMG/M
3300006845|Ga0075421_100456970All Organisms → cellular organisms → Bacteria1524Open in IMG/M
3300006845|Ga0075421_100629105All Organisms → cellular organisms → Bacteria1257Open in IMG/M
3300006846|Ga0075430_100944065All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium710Open in IMG/M
3300006847|Ga0075431_100007735All Organisms → cellular organisms → Bacteria10707Open in IMG/M
3300006852|Ga0075433_10319870All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1373Open in IMG/M
3300006854|Ga0075425_101329264All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300006854|Ga0075425_101694427All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium711Open in IMG/M
3300006876|Ga0079217_10044959All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1741Open in IMG/M
3300006903|Ga0075426_10005066All Organisms → cellular organisms → Bacteria → Proteobacteria9332Open in IMG/M
3300006904|Ga0075424_100924309All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300006914|Ga0075436_100182095All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1485Open in IMG/M
3300006969|Ga0075419_11034956All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium599Open in IMG/M
3300007004|Ga0079218_10120674All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1850Open in IMG/M
3300007004|Ga0079218_10905635All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium867Open in IMG/M
3300009100|Ga0075418_10505413All Organisms → cellular organisms → Bacteria1298Open in IMG/M
3300009137|Ga0066709_101966921All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium811Open in IMG/M
3300009147|Ga0114129_10267853All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2286Open in IMG/M
3300009147|Ga0114129_10882216All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1135Open in IMG/M
3300009157|Ga0105092_10148167All Organisms → cellular organisms → Bacteria1302Open in IMG/M
3300009176|Ga0105242_10373977All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Rhizobacter1322Open in IMG/M
3300009296|Ga0103681_1145172All Organisms → cellular organisms → Bacteria1040Open in IMG/M
3300009800|Ga0105069_1043256All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium546Open in IMG/M
3300009821|Ga0105064_1135996All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium523Open in IMG/M
3300010047|Ga0126382_10838962All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium788Open in IMG/M
3300010360|Ga0126372_12989730All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium524Open in IMG/M
3300010400|Ga0134122_11151033All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium773Open in IMG/M
3300011409|Ga0137323_1079607All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium723Open in IMG/M
3300011409|Ga0137323_1092117All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium671Open in IMG/M
3300011435|Ga0137426_1097348All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium826Open in IMG/M
3300012040|Ga0137461_1072424All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium962Open in IMG/M
3300012041|Ga0137430_1013912All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2046Open in IMG/M
3300012133|Ga0137329_1025253All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium724Open in IMG/M
3300012160|Ga0137349_1011708All Organisms → cellular organisms → Bacteria1297Open in IMG/M
3300012198|Ga0137364_11229794All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium560Open in IMG/M
3300012201|Ga0137365_11033638All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium595Open in IMG/M
3300012209|Ga0137379_10400536All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1282Open in IMG/M
3300012359|Ga0137385_11081114All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium660Open in IMG/M
3300012362|Ga0137361_10863335All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium822Open in IMG/M
3300012922|Ga0137394_11019599All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium687Open in IMG/M
3300012924|Ga0137413_10736949All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium751Open in IMG/M
3300012925|Ga0137419_10686906All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium829Open in IMG/M
3300012929|Ga0137404_10326192All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1338Open in IMG/M
3300012958|Ga0164299_10329163All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium952Open in IMG/M
3300014269|Ga0075302_1156298All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium557Open in IMG/M
3300014272|Ga0075327_1037900All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1430Open in IMG/M
3300014295|Ga0075305_1113819All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium555Open in IMG/M
3300014314|Ga0075316_1067318All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium807Open in IMG/M
3300014873|Ga0180066_1046609All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium850Open in IMG/M
3300014885|Ga0180063_1087946All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium937Open in IMG/M
3300015245|Ga0137409_11540982All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium514Open in IMG/M
3300015252|Ga0180075_1018735All Organisms → cellular organisms → Bacteria960Open in IMG/M
3300015256|Ga0180073_1043742All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium900Open in IMG/M
3300018027|Ga0184605_10351178All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium666Open in IMG/M
3300018028|Ga0184608_10038814All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1829Open in IMG/M
3300018028|Ga0184608_10043822All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1737Open in IMG/M
3300018052|Ga0184638_1089303All Organisms → cellular organisms → Bacteria1130Open in IMG/M
3300018052|Ga0184638_1152023All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium835Open in IMG/M
3300018053|Ga0184626_10047111All Organisms → cellular organisms → Bacteria1800Open in IMG/M
3300018061|Ga0184619_10027277All Organisms → cellular organisms → Bacteria → Proteobacteria2385Open in IMG/M
3300018067|Ga0184611_1031331All Organisms → cellular organisms → Bacteria1704Open in IMG/M
3300018071|Ga0184618_10365423All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium614Open in IMG/M
3300018072|Ga0184635_10302177All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium626Open in IMG/M
3300018079|Ga0184627_10116872All Organisms → cellular organisms → Bacteria1410Open in IMG/M
3300018082|Ga0184639_10527537All Organisms → cellular organisms → Bacteria591Open in IMG/M
3300018422|Ga0190265_11654250All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium751Open in IMG/M
3300018422|Ga0190265_13298634All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium539Open in IMG/M
3300018920|Ga0190273_12107066All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium526Open in IMG/M
3300019377|Ga0190264_10727605All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium739Open in IMG/M
3300019886|Ga0193727_1061506All Organisms → cellular organisms → Bacteria1183Open in IMG/M
3300021073|Ga0210378_10141479All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium930Open in IMG/M
3300021073|Ga0210378_10286698All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium620Open in IMG/M
3300021081|Ga0210379_10036181All Organisms → cellular organisms → Bacteria1930Open in IMG/M
3300021344|Ga0193719_10201280All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium850Open in IMG/M
3300022534|Ga0224452_1164463All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium683Open in IMG/M
3300022694|Ga0222623_10179606All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium823Open in IMG/M
3300025155|Ga0209320_10247880All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium757Open in IMG/M
3300025159|Ga0209619_10095727All Organisms → cellular organisms → Bacteria1780Open in IMG/M
3300025311|Ga0209343_10083599All Organisms → cellular organisms → Bacteria2754Open in IMG/M
3300025318|Ga0209519_10200863All Organisms → cellular organisms → Bacteria1174Open in IMG/M
3300025559|Ga0210087_1047765All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300025791|Ga0210115_1001784All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium6179Open in IMG/M
3300025795|Ga0210114_1003778All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3735Open in IMG/M
3300025992|Ga0208775_1018562All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium547Open in IMG/M
3300026011|Ga0208532_1004451All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium797Open in IMG/M
3300026058|Ga0208421_1005189All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1073Open in IMG/M
3300026066|Ga0208290_1016622All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium762Open in IMG/M
3300026116|Ga0207674_11284840All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium701Open in IMG/M
3300026320|Ga0209131_1124392All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1334Open in IMG/M
3300027462|Ga0210000_1011314All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1322Open in IMG/M
3300027471|Ga0209995_1041917All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium773Open in IMG/M
3300027665|Ga0209983_1008371All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2115Open in IMG/M
3300027695|Ga0209966_1051559All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium876Open in IMG/M
3300027873|Ga0209814_10496839All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium540Open in IMG/M
3300027909|Ga0209382_10273571All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1911Open in IMG/M
3300027909|Ga0209382_11367756All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium713Open in IMG/M
3300027955|Ga0209078_1172372All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium593Open in IMG/M
3300028802|Ga0307503_10499776All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium655Open in IMG/M
3300028803|Ga0307281_10324010All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium578Open in IMG/M
(restricted) 3300031197|Ga0255310_10112755All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium735Open in IMG/M
3300031538|Ga0310888_10701582All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium621Open in IMG/M
3300031903|Ga0307407_10818978All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium709Open in IMG/M
3300032000|Ga0310903_10529588All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium619Open in IMG/M
3300032174|Ga0307470_10647293All Organisms → cellular organisms → Bacteria797Open in IMG/M
3300032180|Ga0307471_101820804All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium760Open in IMG/M
3300033408|Ga0316605_10553986All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1067Open in IMG/M
3300033433|Ga0326726_10915249All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium851Open in IMG/M
3300034090|Ga0326723_0157320All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1000Open in IMG/M
3300034149|Ga0364929_0154110All Organisms → cellular organisms → Bacteria746Open in IMG/M
3300034155|Ga0370498_039212All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1037Open in IMG/M
3300034690|Ga0364923_0113386All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium688Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere13.77%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment8.70%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.25%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil7.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.52%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands5.80%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands4.35%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere2.90%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment2.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil2.17%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.17%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil2.17%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.17%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.17%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment1.45%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.45%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.45%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.45%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.45%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.45%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.45%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.45%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil1.45%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.45%
GroundwaterEnvironmental → Aquatic → Freshwater → Drinking Water → Chlorinated → Groundwater0.72%
GroundwaterEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater0.72%
Sediment (Intertidal)Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)0.72%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.72%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.72%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.72%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil0.72%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.72%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.72%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.72%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.72%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.72%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.72%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886013Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000789Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300002120Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2EnvironmentalOpen in IMG/M
3300003993Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2EnvironmentalOpen in IMG/M
3300004027Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLC_D2EnvironmentalOpen in IMG/M
3300004061Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004778Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3FreshEnvironmentalOpen in IMG/M
3300004779Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3FreshEnvironmentalOpen in IMG/M
3300005183Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1EnvironmentalOpen in IMG/M
3300005218Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005545Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005553Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005836Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBBEnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300005879Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006903Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009296Microbial communities from groundwater in Rifle, Colorado, USA-3A_0.2umEnvironmentalOpen in IMG/M
3300009800Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_30_40EnvironmentalOpen in IMG/M
3300009821Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011409Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT423_2EnvironmentalOpen in IMG/M
3300011435Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT660_2EnvironmentalOpen in IMG/M
3300012040Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2EnvironmentalOpen in IMG/M
3300012041Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT754_2EnvironmentalOpen in IMG/M
3300012133Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT121_2EnvironmentalOpen in IMG/M
3300012160Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT630_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012209Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300014269Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleB_D1EnvironmentalOpen in IMG/M
3300014272Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailB_D1EnvironmentalOpen in IMG/M
3300014295Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_CattailNLB_D1EnvironmentalOpen in IMG/M
3300014314Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_TuleA_D2EnvironmentalOpen in IMG/M
3300014873Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200B_16_10DEnvironmentalOpen in IMG/M
3300014885Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10DEnvironmentalOpen in IMG/M
3300015245Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015252Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT399_16_10DEnvironmentalOpen in IMG/M
3300015256Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10DEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018052Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300021073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redoEnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021344Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300025155Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4EnvironmentalOpen in IMG/M
3300025159Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 3EnvironmentalOpen in IMG/M
3300025311Groundwater microbial communities from Rifle, Colorado - Rifle CSP2_plank lowO2_0.2 (SPAdes)EnvironmentalOpen in IMG/M
3300025318Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 1EnvironmentalOpen in IMG/M
3300025559Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025791Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025795Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025992Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_104 (SPAdes)EnvironmentalOpen in IMG/M
3300026011Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_301 (SPAdes)EnvironmentalOpen in IMG/M
3300026058Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026066Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300027462Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027471Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027665Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027695Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300027955Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028803Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300033408Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCTEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M
3300034149Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17EnvironmentalOpen in IMG/M
3300034155Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_17EnvironmentalOpen in IMG/M
3300034690Sediment microbial communities from East River floodplain, Colorado, United States - 60_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
SwBSRL2_0904.000039002162886013Switchgrass RhizosphereMEFNRREKTWMVNYIQNKWKLTPRIAEESYRVWLNGFTADGKIPLKDLQEIYDEAFAAKLIPSAVPVAKVMDYAWVDEVLKEKR
F24TB_1273751623300000550SoilPKVAEESYRTWLSGFTSDGKIPLKDLQEIYDTALASQLIPTAVPVAKVMDYTLLEEVLKERR*
F14TC_10061079233300000559SoilVKAVIRATFEAMDFNRKEKPWMVTYIQNKWKLTPKVAEESYRTWLSGFTSDGKIPLKDLQEIYDTALASQLIPTAVPVPKVMDYTLLEEVLKERR*
JGI1027J11758_1284938523300000789SoilMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSAVPVHKVMDYTLVDEVLKEKR*
JGI11643J12802_1179281823300000890SoilQNKWKVPAKVAEESYKSWLNGFTTDGKIPIKDLQEIYDQAFAAKLIPTPVPAAQVMDYTLTDEVFKEKRN*
C687J26616_1013960623300002120SoilMATLQKRIPIINYVQNKWKLTPKVAEESYRAWLNGFTSDGKIPLKDFQEIYDTAYASQLIPTPVPVPKVVDYTLL
Ga0055468_1001701913300003993Natural And Restored WetlandsMVNYIQNKWKLSPKVAEESYRVWLNGFTSDGKIPLKGLQEIYGEAFAAKLIPTAVPVAKVMDYTFVDQVLKEKDRPLRSRKWLARHLLIL*
Ga0055459_1012944613300004027Natural And Restored WetlandsNQKVKYWMVDYRRNKWKVSAKVAEESYKTRLNDFTSDGKIPVKHLQEIYDQAFVAKWIPIPVPAAQVMDYTLTDAVFREKR*
Ga0055487_1008859323300004061Natural And Restored WetlandsMVIRAVFEAMDFNRREKTWMVNYIQGKWKVSAKTAEESYKAWLNGFTTDGKIPIKDLQEIYDQAYAAKLIPTPVPAAQVIDYTLTDEVFKERK*
Ga0062592_10219827313300004480SoilTFEAMEFNRREKTWMVNYIQTKWKLTPKVAAESYRVWLNGFTSDGKIPIKDLQDIYDEALAAKLIPSAVPVAKVMDYTWVDEVIKEKR*
Ga0062383_1048966013300004778Wetland SedimentKTVIRAVFEAMDFNRREKVWMVNYIANKWKIPAKVAEDSYKAWLNGFTTDGKIPIKELQDIYDQAFAAKLIPTPVPAAQVMDYSLTDEVYRERK*
Ga0062380_1048407323300004779Wetland SedimentYIANKWKIPAKVAEESYKSWLNGFTTDGKIPIKELQDIYDQAFAAKLIPTPVPAAQVMDYSLTDEVFREKR*
Ga0068993_1015854613300005183Natural And Restored WetlandsQNKWKISAKVAEESYRAWLNGFTTDGKIPLKDLQDIYDQAFASKLIPTPVPAAQVMDYSLTDEVFREKK*
Ga0068996_1008194513300005218Natural And Restored WetlandsNRREKTWMVNYIQNKWKISAKVAEESYRAWLNGFTTDGKIPLKDLQDIYDQAFASKLIPTPVPAAQVMDYSLTDEVFREKK*
Ga0066388_10322613523300005332Tropical Forest SoilMVGYIQNKWKLTASVAEEAYRYWLQGLTSDGKISLKDLQETYDQAYASQLIPTPVNVKNVMDYTPLDEVLKEKR*
Ga0066388_10834369213300005332Tropical Forest SoilREKSWMISYIQNKWKLTPSVAEAAYRYWLQGLTSDGKIPFKDLQETYDQAYASQLIPTLVHVKNVMDYTPLDEVLKEKR*
Ga0070695_10146516623300005545Corn, Switchgrass And Miscanthus RhizosphereFNRKEKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAARLIPSAVPVAKVMDYAWVDEVLKEKR*
Ga0070665_10219281313300005548Switchgrass RhizosphereSKWKVPTKVAEDSYRSWLSGLTTDGKIPVKELQDIYDQAYAAQLIPTPVPAAKVMDYTLTDEVLKEKK*
Ga0066695_1004789313300005553SoilYIQNKWKLTLKVAEESYRTWLNGFTSDGKIPLKDLQEIYDTALASQLIPTAVPVSKVMDYTLLEEVLKERR*
Ga0066905_10093883013300005713Tropical Forest SoilAVLRATFETMDFNRREKSWMISYIQNKWKLTPSVAEAAYHYWLHGLTSDGKIPFKDLQETYDQAYASQLIPTPVNVKNVIDYTPLDEMLKEKR*
Ga0074470_1052017923300005836Sediment (Intertidal)FEAMDFNRREKAWMVNYIQNKWKVPTKVAEEAYQSWLNGFTTDGKIPIKDLQEIYDQAFAAKLIPTPVPAAQVMNYTLTDEVFREKRN*
Ga0068863_10045513923300005841Switchgrass RhizosphereNYIQSKWKVPTKVAEDSYRSWLSGLTTDGKIPVKELQDIYDQAYAAQLIPTPVPAAKVMDYTLTDEVLKEKK*
Ga0068860_10090386913300005843Switchgrass RhizosphereMEFNRKEKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSAVPVHKVMDYTLVDEVLKEKR*
Ga0068862_10196556513300005844Switchgrass RhizosphereNRKEKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSAVPVHKVMDYTLVDEVLKEKR*
Ga0075295_100097153300005879Rice Paddy SoilMVNYIQNKWKLSPKVAEESYRVWLNGFTSDGKIPLKGLQEIYGEAFAAKLIPTAVPV
Ga0081455_1060754023300005937Tabebuia Heterophylla RhizosphereQNRWKLAPSVAEAAYRYWLQGLTSDGKIPLKDLQETYDQAYASQLIPTPVTVKNLMDYTPLDEVLKEKR*
Ga0075428_10098560213300006844Populus RhizosphereYIQNKWKLTPSVAEEAYRYWLQGLTSDGKIPLKDLQETYDQAYASQLIPTPVTVKSVMDYTQLDEVLKEKR*
Ga0075428_10255882313300006844Populus RhizosphereKAVIRATFEAMDFNRKEKSWMVNYIQNKWKLTPKVAEESYRTWLNGFTTDGKISFRDLQEIYDTALASQLIPTAVPVPKVMDYTLLDEILKERK*
Ga0075421_10045697033300006845Populus RhizosphereATFETMDFNRREKSWMISYIQNKWKLTASVAEEAYRYWLQGLTNDGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEALKEKR*
Ga0075421_10062910513300006845Populus RhizosphereRTPSDIRNDGFQSKRRSWMIRYIQNKWKLTPSVAEEAYRYWLQGLTSDGKIPLKDLQETYDQAYASQLIPTPVTVKSVMDYTQLDEVLKEKR*
Ga0075430_10094406513300006846Populus RhizosphereREKSWMISYIQNKWKLTASVAEEAYRYWLQGLTNEGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR*
Ga0075431_10000773513300006847Populus RhizosphereNYIQTKWKLTPKVAAESYRVWLNGFTSDGKIPIKDLQDIYDEALAAKLIPSAVPVAKVMDYTWVDEVIKEKR*
Ga0075433_1031987023300006852Populus RhizosphereMVNYIQSKWKLTPRIAEESYLAWLSGLTSDGKIALKDLQEIYDSALASQLIPTPVPVPKVMDYTLIDEALKDRK*
Ga0075425_10132926433300006854Populus RhizosphereYIQNKWKLTASVAEEAYRYWLQGLTNEGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR*
Ga0075425_10169442723300006854Populus RhizosphereMVNYIQSKWKLTPRIAEESYLAWLSGLTSDGKIALKDLQEIYDSALASQLIPTPVPVPKVMD
Ga0079217_1004495913300006876Agricultural SoilVRATFEAMEFNRREKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPIKDLQDIYDEALAAKLIPSAVPVAKVMDYTWVDEVLKEKK*
Ga0075426_1000506653300006903Populus RhizosphereMVNYIQSKWKLTPRVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSAVSVPKVMDYTLVDEVLKERR*
Ga0075424_10092430923300006904Populus RhizosphereSWMIRYIQNKWKLTPSVAEEAYRYWLQGLTSDGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTQLDEVLKEKR*
Ga0075436_10018209523300006914Populus RhizosphereVSMVNYIQSKWKLTPRVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSAVSVPKVMDYTLVDEVLKERR*
Ga0075419_1103495613300006969Populus RhizosphereIEKSWMISYIQNKWKLTASVAEEAYRYWLQGLTNEGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR*
Ga0079218_1012067433300007004Agricultural SoilVVRATFEAMEFNRREKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPIKDLQDIYDEALAAKLIPSAVPVAKVMDYTWVDEVLKEKK*
Ga0079218_1090563523300007004Agricultural SoilWMTNYIQNKWKVSPKVAEESYRAWLNGFTTDGKIPLKDLQDIYDQAFAAKLIPTQVPAAQVMDYSLTDEVYKEKR*
Ga0075418_1050541343300009100Populus RhizosphereRNAGSETQTRASPGQGRTPSDIRNDGFQSKRRSWMIRYIQNKWKLTPSVAEEAYRYWLQGLTSDGKIPLKDLQETYDQAYASQLIPTPVTVKSVMDYTQLDEVLKEKR*
Ga0066709_10196692113300009137Grasslands SoilQVKAVIQATFEAMDFNRKEKPWMVNYIHNKWKLTPKVAEESYRTWLNGFTSDGKIPLKDLQEIYDTALASQLIPTAVPVSKVMDYTLLEEVLKERR*
Ga0114129_1026785343300009147Populus RhizosphereMIRYIQNKWKLTPSVAEEAYRYWLQGLTSDGKIPLKDLQETYDQAYASQLIPTPVTVKSVMDYTQLDEVLKEKR*
Ga0114129_1088221623300009147Populus RhizosphereMVNYIQSKWKLTPRIAEESYLAWLSGLTSDGKIALKDLQEIYDSALASQLIPTPVPVPKVMDYTLIDEAL
Ga0105092_1014816723300009157Freshwater SedimentEAMEFNRKEKAWMVGYIQNKWKLTPKVAEECYRAWLNGFTADGKIPIKDFQEIYDIAYASQLIPTPVPVQKVIDYTLLDEVLKEKK*
Ga0105242_1037397713300009176Miscanthus RhizosphereRREKAWMVNYIQSKWKVPTKVAEDSYRSWLSGLTTDGKIPVKELQDIYDQAYAEQLIPTPVPAAKVMDYTLTDEALKEKK*
Ga0103681_114517223300009296GroundwaterMATLQKRIPIINYVQNKWKLTPKVAEESYRAWLNGFTSDGKIPLKDFQEIYDTAYASQLTPTPVP
Ga0105069_104325613300009800Groundwater SandFETMDFNRREKSWMISYIQNKWKLTPAVAEEAYRYWLQGLTNDGKIPLKDLQGTYDQAYVSQLIPTPVTVKNVMDYTLLDEVLKEKR*
Ga0105064_113599613300009821Groundwater SandWMVNYIQNKWKISAKVAEESYRAWLNGFTTDGKIPIKDLQDIYDQAYASKLIPTPVPAAQVMDYSLIDEVLREKK*
Ga0126382_1083896213300010047Tropical Forest SoilAMDFNRKEKAWMVNYIANKWKISPRVAEEAYKSWLSGFTIDGKIPIKDLQDIYDQAFASKLIPTPVLAARVMDYSLVDEIYKERR*
Ga0126372_1298973013300010360Tropical Forest SoilKWKSTPSVAEAAYRYWLQGLTSDGKIPFKDLQETYDQAYASQLIPTPVHVKNVMDYTPLDEVLKEKR*
Ga0134122_1115103313300010400Terrestrial SoilTWMTNYIQNKWKVSPKVAEESYRAWLNGFTTEGKIPIKDLQEIYDQAFAAKLIPTQVPAAQVMDYSLTDEVYKEKR*
Ga0137323_107960713300011409SoilEKAWMVNYIQNKWKLTPAIAEESYRAWLNGFTSDGKIPIKDFQEIYDTAYASKLIPTPVPVQKVIDYTFLDEVLKEKR*
Ga0137323_109211713300011409SoilKISAKVAEESYKSWLNGFTTDGKISIKDLQDIYDQAFASKLIPTPVPAAQVMDYSLTDEVFREKK*
Ga0137426_109734813300011435SoilYIQGKWKVSAKVAEESYKSWLNGFTTDGKIPIKDLQEIYDQAFAAKLIPTPVPAAQVMDYTLTDEVFKEKRN*
Ga0137461_107242413300012040SoilAVFEAMDFNRKEKTWMVNYIQNKWKIPAKVAEESYKSWLNGFTTDGKIPIKELQDIYDQAFAAKLIPTPVPAAQVMDYSLTDEVFKEKRN*
Ga0137430_101391213300012041SoilWKLTPAVAEESYRTWLNGFTLDGKIPIKDFQEIYDTAYASKLIPTPVPVQKVIDYTFLDEVLKEKR*
Ga0137329_102525313300012133SoilIRATFEAMDFNRKEKVWMVNYIQNKWKVSPKVAEESYRAWLNGFTTDGKIPIKELQDIYDQAYASKLIPTPVPAAQVMDYSLTDEVFREKK*
Ga0137349_101170813300012160SoilWMISYIQNKWKLTPSVAEEAYRYWLQGLTNDGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR*
Ga0137364_1122979413300012198Vadose Zone SoilEFNRKEKTWRVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFGAKLIPSAVPVHKVMDYTLVDEVLKEKR*
Ga0137365_1103363823300012201Vadose Zone SoilIDFNRKEKTWMVNYIQNKWKLTPKVAEESYRTWLNGFTSDGKIPIKDLQEIYDTALASQLIPTAVPVSKVMDYTLLEEVLKEKR*
Ga0137379_1040053643300012209Vadose Zone SoilKLTPKVAEESYRTWLNGFTSDGKIPLKDLQEIYDTAFASQLIPTAVPVSKVMDYTLLEEVLKERR*
Ga0137385_1108111413300012359Vadose Zone SoilKTVLRATLEAMEFNRKEKTWMVNYIQSKWKLTPRIAEESYLAWLSGLTSDGKIALKDLQEIYDSALASQLIPTPVPVPKVMDYTLIDEVLKDRK*
Ga0137361_1086333523300012362Vadose Zone SoilAQVKAVLRATLEAMEFNRKEKTWMVNYIQSKWKLTPRIAEESYLAWLSGLTSDGKIALKDLQEIYDSALASQLIPTPVPVPKVMDYTLIDEVLKERK*
Ga0137394_1101959913300012922Vadose Zone SoilTVLRATLEAMEFNRKEKTWMVNYIQSKWKLTPRIAEESYLAWLSGLTSDGKIALKDLQEIYDSALASQLIPTPVPVPKVMDYTLIDEVSKERK*
Ga0137413_1073694913300012924Vadose Zone SoilEFNRKEKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSAVPVHKVMDYTLVDEVLKEKR*
Ga0137419_1068690613300012925Vadose Zone SoilAQVKAVLRATLEAMEFNRKEKPWMVNYIQSKWKLTPRIAEESYLAWLSGLSSDGKIALKDLQEIYDSALASQLIPTPVPVPKVMDYTLIDEVLKDRK*
Ga0137404_1032619233300012929Vadose Zone SoilQVKTVLRATLEAMEFNRKEKTWMVNYIQSKWKLTPRIAEESYLAWLSGLTSDGKIALKDLQEIYDSALASQLIPTPVPVPKVMDYTLIDEVLKDRK*
Ga0164299_1032916323300012958SoilMKLTPSVAEEAYRDWLQGLTNDGKIPLKDLQETYDQAYASQLIPTPVTVKSVMDYTQLDEVLKEKR*
Ga0075302_115629823300014269Natural And Restored WetlandsVLRATFEAMDFNRREKSWMVNYIQNKWKISAKVAEESYRAWLNGFTTDGKIPLKDLQDIYDQAFASKLIPTPVPAAQVMDYSLTDEVFREKK*
Ga0075327_103790033300014272Natural And Restored WetlandsAWMVNYIQNKWRLTPNVAEESYRVWLNGFTADGKIPIKDFQEIYDIAYASKLIPTPVPVQKVIDYSFLDEVLKEKR*
Ga0075305_111381923300014295Natural And Restored WetlandsMDSNQKVKDWMVDYLRNKWKVSAKVAEESYKTRLNDFTSDGKIPVKHLQEIYDHAFAAKLIPTAVPAAQVMDHTPTDEVLREKR*
Ga0075316_106731813300014314Natural And Restored WetlandsMEFNRKEKAWMVNYIQNKWKLSPKVAEESYRVWLNGFTSDGKIPLKGLQEIYGEAFAAKLIPTAVPVAKVMDYTFVDQVLKEKDRPLRSRKWLARHLLIL*
Ga0180066_104660923300014873SoilVWKISAKVAEESYKSWLDGFTTNGKIPLKDLQDIYDQAYASKLIPTPVPAAQVMDYTLIDEVLKERR*
Ga0180063_108794613300014885SoilIRATFEAMDFNRREKTWMVNYIQNKWKVAPKVAKESYRAWLNGFTTDGKIPIKDFQEIYDQAYESKLIPTPVPAAKVMDYTLTDEVFKEKR*
Ga0137409_1154098213300015245Vadose Zone SoilVLRATFEAMEFNRKEKTWMVDYIQSKWRLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFSAKLIPSAVPVPKVMDYTLVDEVLKEKR*
Ga0180075_101873513300015252SoilEKVWMVNYISNKWKIPAKVAEESYQSWLNGFTTDGKIPIKELQDIYDQAYASKLIPTPVPAAQVMDYSLTDEVFREKK*
Ga0180073_104374223300015256SoilMVNYIQNKWKLTPAIAEESYRAWLNGFTSDGKIPIKDFQEIYDTAYASKLIPTPVPVQKVIDYTFLDEVLKEKR*
Ga0184605_1035117813300018027Groundwater SedimentMVNYIQTKWKLTPKIAEESYRTWLNGFTNDGKIPFKDLQEIYDAALASQLIPTAVPVPKVMDYTLLDEVLKERR
Ga0184608_1003881433300018028Groundwater SedimentVKAVIRATFEAMDFNRREKTWMVNYIQTKWKLTPKIAEESYRTWLNGFTNDGKIPFKDLQEIYDAALASQLIPTAVPVPKVMD
Ga0184608_1004382233300018028Groundwater SedimentNRKEKTWMTNYIQNKWKLTPKVAEESYRTWLNGFTSDGKIALKDLQEIYDTALASQLIPTAVPVPKVMDYTLLDEVLKERK
Ga0184638_108930333300018052Groundwater SedimentTAKVADESYRVWLNGFTAEGKIQLQDFQEIYDAAYAAQLIPTPVPVQKVVDYTLLDEVLKERR
Ga0184638_115202313300018052Groundwater SedimentMVNYIQTKWKLTPKIAEESYRTWLNGFTNDGKIPFKDLQEIYDAALASQLIPTAVPVPKVMDYTLLDEVLKEIR
Ga0184626_1004711133300018053Groundwater SedimentNRREKSWMISYIQNKWKLTPSVAEEAYRYWLQGLTNDGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR
Ga0184619_1002727743300018061Groundwater SedimentMDFNRREKTWMVNYIQTKWKLTPKIAEESYRTWLNGFTNDGKIPFKDLQEIYDAALASQLIPTAVPVPKVMDYTLLDEVLKEIR
Ga0184611_103133133300018067Groundwater SedimentKWKLSPSVAEEAYRYWLQGLTNNGTIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR
Ga0184618_1036542323300018071Groundwater SedimentFNRREKTWMTNYIQNKWKVSPKVAEESYRAWLNGFTTDGKIPLKDLQDIYDQAFAAKLIPTHVPAAQVMDYSLTDEVYKEKR
Ga0184635_1030217713300018072Groundwater SedimentTPKVAEESYRTWLNGFTSDGKIALKDLQEIYDTALASQLIPTAVPVPKVMDYTLLDEVLKERK
Ga0184627_1011687213300018079Groundwater SedimentRWKLTPKAADEAYRFWLQGLTTDGKIPLKELQEMYDTAYAAQLIPTPVPVVKVIDYTLLDEVLKERR
Ga0184639_1052753713300018082Groundwater SedimentLWKLTPKAADEAYRFWLQGLTTDGKIPLKELQEMYDTAYAAQLIPTPVPVVKVIDYTLLDEVLKERR
Ga0190265_1165425023300018422SoilRKEKTWMVNYISTKWKIPTKVAEESYKAWLNGFTVDGKIPIKDLQDIYDQAFASKLIPTPVPAAQVMDYSLTDEVFKEKRN
Ga0190265_1329863413300018422SoilAVLRATFEAMEFNRREKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQAIYDEALSAKLIPSAVPVPKVVDYTWVDEVLKEKR
Ga0190273_1210706613300018920SoilEKIWMVNYIQSKWKVSAKIAEESYKSWLNGFTSDGKIPVKDLQDIYDQAYAAKLIPTPVPAAQVMDYTLTDEVFKERRN
Ga0190264_1072760513300019377SoilKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQDIYDEALAAKLIPSAVPVAKVMDYTWVDEVIKEKK
Ga0193727_106150633300019886SoilTPSVAEEAYRYWLQGLTNDGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR
Ga0210378_1014147923300021073Groundwater SedimentTMDFNRKEKTWMTNYIQNKWKLTSKVAEESYRTWLNGFTADGKIAIKDLQEIYDTALASQLIPTAVPVPKVMDYTLLDEVLKERK
Ga0210378_1028669823300021073Groundwater SedimentMVNYIQTKWKLTPKIAEESYRTWLNGFTNDGKIPFKDLQEIYDAALASQLIPTAVPVPKVMD
Ga0210379_1003618113300021081Groundwater SedimentVAEEAYRYWLQGLTNNGTIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR
Ga0193719_1020128023300021344SoilLRATLEAMEFNRKEKTWMVNYIQSKWKLTPRIAEESYLAWLSGLTADGKIALKDLQEIYDSALASQLIPAPVPVPKVMDYTLIDEVLKDRK
Ga0224452_116446323300022534Groundwater SedimentVAEEAYRYWLQGLTNDGKIPPKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR
Ga0222623_1017960623300022694Groundwater SedimentYIQTKWKLTPKIAEESYRTWLNGFTNDGKIPFKDLQEIYDAALASQLIPTAVPVPKVMDYTLLDEVLKEIR
Ga0209320_1024788023300025155SoilMATLQKRIPIINYVQNKWKLTPKVAEESYRAWLNGFTSDGKIPLKDFQEIYDTAYASQLIPTPVPVPKVVDYTLLDEVLKERR
Ga0209619_1009572733300025159SoilMATLQKRIPIINYVQNKWKLTPKVAEESYRAWLNGFTSDGKIPLKDFQEIYDTAYASQLIPTPVPVPKVVNYTLLDEVLKERR
Ga0209343_1008359923300025311GroundwaterMATLQKRIPIINYVQNKWKLTPKVAEESYRAWLNGFTSDGKIPLKDFQEIYNTAYASQLIPTPVPVPKVVDYTLLDEVLKERR
Ga0209519_1020086323300025318SoilQKQIPIINYVQNKWKLTPKVAEESYRAWLNGFTSDGKIPLKDFQEIYNTAYASQLIPTPVPVPKVVDYTLLDEVLKERR
Ga0210087_104776523300025559Natural And Restored WetlandsIQNKWKLSPKVAEESYRVWLNGFTSDGKIPLKGLQEIYGEAFAAKLIPTAVPVAKVMDYTFVDQVLKEKDRPLRSRKWLARHLLIL
Ga0210115_100178483300025791Natural And Restored WetlandsMVNYIQNKWKLSPKVAEESYRVWLNGFTSDGKIPLKGLQEIYGEAFAAKLIPTAVPVAKVMDYTFVDQVLKEKDRPLRSRKWLARHLLIL
Ga0210114_100377843300025795Natural And Restored WetlandsMVNYIQNKWKLSPKVAEESYRVWLNGFTSDGKIPLKGLQEIYGEAFAAKLIPTAVPVAKVMDYTFVDQVLKEKR
Ga0208775_101856213300025992Rice Paddy SoilNRKEKAWMVNYIQNKWKLSPKVAEESYRVWLNGFTSDGKIPLKGLQEIYGEAFAAKLIPTAVPVAKVMDYTFVDQVLKEKR
Ga0208532_100445123300026011Rice Paddy SoilMVNYIQNKWKLSPKVAEESYRVWLNGFTSDGKIPLKGLQEIYGEAFAAKLIPTAVP
Ga0208421_100518923300026058Natural And Restored WetlandsMVNYIQNKWKLSPKVAEESYRVWLNGFTSDGKIPVKGLQEIYGEAFAAKLIPTAVPVAKVMDYTFVDQVLKEKDRPLRSRKWLARHLLIL
Ga0208290_101662213300026066Natural And Restored WetlandsMVNYIQNKWKLSPKVAEESYRVWLNGFTSDGKIPLKGLQEIYGEAFAAKLIPTAVPVAKVMDYTFVD
Ga0207674_1128484023300026116Corn RhizosphereWMLNYIQNKWKVPAKVAEESYKSWLSGFTTDGKIPIKDLQEIYDQAFAAKLIPTPVPAAQVMDYTLTDEVFKEKRN
Ga0209131_112439233300026320Grasslands SoilREKTWMMNYISNKWKISAKVAEESYRSWLNGFTTDGKIPLKDLQEIYDQAYASKLIPTAVPVAQVMDYSLTDEVFKEKRN
Ga0210000_101131413300027462Arabidopsis Thaliana RhizosphereATFEAMEFNRKEKTWMVNYIQNKWKLSPKVAEESYRVWLNGFTSDGKIPLQDLQEIYDEAFAAKLIPTTVPVAKVMDYTFVDQVLKEKR
Ga0209995_104191723300027471Arabidopsis Thaliana RhizosphereEAMEFNRKEKTWMVNYIQNKWKLSPKVAEESYRVWLNGFTSDGKIPLQDLQEIYDEAFAAKLIPTTVPVAKVMDYTFVDQVLKEKR
Ga0209983_100837143300027665Arabidopsis Thaliana RhizosphereYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPIKDLQDIYDEAFAAKLIPSAVPVAKVMDYTWVDEVIKERK
Ga0209966_105155913300027695Arabidopsis Thaliana RhizosphereMEFNRKEKTWMVNYIQNKWKLSPKVAEESYRVWLNGFTSDGKIPLQDLQEIYDEAFAAKLIPTTVPVAKVMDYTFVDQVLKEKR
Ga0209814_1049683913300027873Populus RhizosphereKERAWMVDYIQNKWKLTPKVAEESYRTWLNGFTSDGKIPLKDLQEIYDTALASQLIPTAVPVPKVMDYTLLDEVLKERKQFRGQ
Ga0209382_1027357113300027909Populus RhizosphereMLRATFEAMEFNRKEKTWMVNYIQNKWKLTPKVAEESYRVWLNGFTSDGKIPLKDLQEIYDEAFAAKLIPSAVPVPKVMDYTLVDEVLKEKR
Ga0209382_1136775613300027909Populus RhizosphereRRSWMIRYIQNKLKLTPSVAEEAYRYWLQGLTSDGKIPLKDLQETYDQAYASQLIPTPVTVKSVMDYTQLDEVLKEKR
Ga0209078_117237213300027955Freshwater SedimentKAWMASYIQNKWKIPAKAAEESYRVWLNGFTTDGKIAIKDFQEIYDQAYESKLIPTPVPAAKVMDYTLTDEVFKERK
Ga0307503_1049977613300028802SoilNYIQNKWKVSAKVAEESYKSWLNGFTTDGKIPIKDLQEIYDQAFAAKLIPTPVPAAQVMDYTLTDEVFRERR
Ga0307281_1032401013300028803SoilSAKVAEESYKAWLNGFTTDGKISIKDLQDIYDQAFASKLIPTPVPAAQVMDYSLTDEVFREKK
(restricted) Ga0255310_1011275533300031197Sandy SoilRATFEAMEFNRREKTWMVNYIQKKWKLTPKVAEESYRVWLNGFTADGKIPLKDLQEIYDEAFAAKLIPSAVPVARVMNYTWVDEVLKEKR
Ga0310888_1070158223300031538SoilMDFNRREKIWMVNYIQNKWKVSAKIAEESYKSWLNGFTVDGKIPLKDLQEIYDQAYAAKLIPTAVPAAQVMDYTLTDEVFKEKRN
Ga0307407_1081897813300031903RhizosphereVFEAMDFNRREKIWMVNYIQNKWRVSAKIAEESYKSWLNGFTVDGKIPLKDLQEIYDQAYAAKLIPTAVPAAQVMDYTLTDEVFKEKRN
Ga0310903_1052958823300032000SoilPAVAEEAYRYWLQGLTNDGKIPLKDLQETYDQAYLSQLIPTPVNVRAVMDYTPLDDVLKEKR
Ga0307470_1064729323300032174Hardwood Forest SoilIRYIQNKWKLTPSVAEEAYRYWLQGLTSDGKIPLKDLQETYDQAYASQLIPTPVTVKSVMDYTQLDEVLKEKR
Ga0307471_10182080413300032180Hardwood Forest SoilEFNRKEKTWMVNYIQSKWKLTPRIAEESYLAWLSGLTSDGKIALKDLQEIYDSALASQLIPTPVPVPKVMDYTLIDEVLKDRK
Ga0316605_1055398613300033408SoilVIRAVFEAMDFNRREKTWMVNYIQNKWKVSAKVAEESYKAWLNGFTTDGKIPIKDLQEIYDQAFAAKLIPTPVPAAQVMDYTLTDEVFRERR
Ga0326726_1091524913300033433Peat SoilEPAQVKAVLRATFETMDFNRREKSWMISYIQNKWKLTPSVAEEAYRYWLQGLTSDGKIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR
Ga0326723_0157320_707_9613300034090Peat SoilMDFNRREKSWMISYIQNKWKLTPSVAEEAYRYWLQGLTSDGKIPLKDLQETYDQAYTSQLIPTPVTVKNVMDYTLLDEVLKEKR
Ga0364929_0154110_555_7463300034149SedimentTPSVAAEAYRYWLQGLTNNGTIPLKDLQETYDQAYASQLIPTPVTVKNVMDYTLLDEVLKEKR
Ga0370498_039212_5_2593300034155Untreated Peat SoilMDFNRREKAWMVNYIQNKWKIPPKVAEESYRAWLNGFTTDGKIPIKDFQEIYDQAYESKLIPTPVPAAKVMDYTLTDEVYKEKR
Ga0364923_0113386_3_2243300034690SedimentVNYIQNKWKLTPAIAEESYRAWLNGFTSDGKIPIKDFQEIYDTAYASKLIPTPVPVQKVIDYTFLDEVLKEKR


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