Metagenome Family F055534

Basic Information
Family ID	F055534
Family Type	Metagenome
Number of Sequences	138
Average Sequence Length	44 residues
Representative Sequence	MRNHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGN
Number of Associated Samples	100
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	83.33 %
% of genes near scaffold ends (potentially truncated)	18.12 %
% of genes from short scaffolds (< 2000 bps)	50.72 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.67

Most Common Taxonomy
Group	Duplodnaviria (35.507 % of family members)
NCBI Taxonomy ID	2731341
Taxonomy	All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater (38.406 % of family members)
Environment Ontology (ENVO)	Unclassified (68.841 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (82.609 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.89% β-sheet: 0.00% Coil/Unstructured: 61.11%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF05866	RusA	17.39
PF07120	DUF1376	13.04
PF13392	HNH_3	6.52
PF14549	P22_Cro	4.35
PF04404	ERF	4.35
PF01555	N6_N4_Mtase	3.62
PF00182	Glyco_hydro_19	2.17
PF00196	GerE	1.45
PF02086	MethyltransfD12	1.45
PF05766	NinG	1.45
PF05869	Dam	1.45
PF05772	NinB	1.45
PF04466	Terminase_3	1.45
PF03237	Terminase_6N	0.72
PF02195	ParBc	0.72
PF01467	CTP_transf_like	0.72
PF01695	IstB_IS21	0.72
PF13463	HTH_27	0.72
PF15943	YdaS_antitoxin	0.72
PF05063	MT-A70	0.72
PF03245	Phage_lysis	0.72
PF09588	YqaJ	0.72
PF01844	HNH	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG4570	Holliday junction resolvase RusA (prophage-encoded endonuclease)	Replication, recombination and repair [L]	17.39
COG3756	Uncharacterized conserved protein YdaU, DUF1376 family	Function unknown [S]	13.04
COG0863	DNA modification methylase	Replication, recombination and repair [L]	3.62
COG1041	tRNA G10 N-methylase Trm11	Translation, ribosomal structure and biogenesis [J]	3.62
COG2189	Adenine specific DNA methylase Mod	Replication, recombination and repair [L]	3.62
COG3179	Chitinase, GH19 family	Carbohydrate transport and metabolism [G]	2.17
COG3979	Chitodextrinase	Carbohydrate transport and metabolism [G]	2.17
COG0338	DNA-adenine methylase	Replication, recombination and repair [L]	1.45
COG1783	Phage terminase large subunit	Mobilome: prophages, transposons [X]	1.45
COG3392	Adenine-specific DNA methylase	Replication, recombination and repair [L]	1.45
COG4725	N6-adenosine-specific RNA methylase IME4	Translation, ribosomal structure and biogenesis [J]	1.45
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.57 %
Unclassified	root	N/A	30.43 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	44.93 %
Unclassified	root	N/A	30.43 %
cellular organisms	root	All Organisms → cellular organisms	24.64 %

Name	Rank	Taxonomy	Distribution
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	35.51 %
Unclassified	root	N/A	30.43 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	23.91 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.72 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	35.51 %
Unclassified	root	N/A	30.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	21.01 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.72 %

Name	Rank	Taxonomy	Distribution
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	35.51 %
Unclassified	root	N/A	30.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	6.52 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.72 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	35.51 %
Unclassified	root	N/A	30.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.80 %
Bacilli	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli	0.72 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
environmental samples	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples	35.51 %
Unclassified	root	N/A	30.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2.17 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.45 %
Lactobacillales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales	0.72 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	35.51 %
Unclassified	root	N/A	30.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.45 %
Protostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia	0.72 %
Streptococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae	0.72 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	35.51 %
Unclassified	root	N/A	30.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.45 %
Ecdysozoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa	0.72 %
Streptococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus	0.72 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	35.51 %
Unclassified	root	N/A	30.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.45 %
Streptococcus pneumoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	0.72 %
Nematoda	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda	0.72 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	35.51 %
Unclassified	root	N/A	30.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.45 %
Chromadorea	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea	0.72 %
Streptococcus pneumoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	0.72 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	35.51 %
Unclassified	root	N/A	30.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.45 %
Rhabditida	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida	0.72 %
Streptococcus pneumoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	0.72 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	35.51 %
Unclassified	root	N/A	30.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.45 %
Rhabditina	suborder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina	0.72 %
Streptococcus pneumoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	0.72 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	35.51 %
Unclassified	root	N/A	30.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.45 %
Rhabditomorpha	infraorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha	0.72 %
Streptococcus pneumoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	0.72 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	35.51 %
Unclassified	root	N/A	30.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.45 %
Rhabditoidea	superfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea	0.72 %
Streptococcus pneumoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	0.72 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	35.51 %
Unclassified	root	N/A	30.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.45 %
Rhabditidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae	0.72 %
Streptococcus pneumoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	0.72 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	35.51 %
Unclassified	root	N/A	30.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.45 %
Peloderinae	subfamily	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Peloderinae	0.72 %
Streptococcus pneumoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	0.72 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	35.51 %
Unclassified	root	N/A	30.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.45 %
Caenorhabditis	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Peloderinae → Caenorhabditis	0.72 %
Streptococcus pneumoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	0.72 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
uncultured Caudovirales phage	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	35.51 %
Unclassified	root	N/A	30.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Alcaligenaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	1.45 %
Caenorhabditis remanei	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Peloderinae → Caenorhabditis → Caenorhabditis remanei	0.72 %
Streptococcus pneumoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	0.72 %
Acidovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000176\|TB03JUN2009E_c013615	All Organisms → Viruses → Predicted Viral	1369	Open in IMG/M
3300000203\|TB18AUG2009E_c000356	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	8920	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1012686	All Organisms → cellular organisms → Bacteria → Proteobacteria	4399	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1015897	Not Available	3713	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1026617	All Organisms → cellular organisms → Bacteria → Proteobacteria	2513	Open in IMG/M
3300000439\|TBL_comb48_EPIDRAFT_1028103	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2413	Open in IMG/M
3300000553\|TBL_comb47_HYPODRAFT_10039403	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3097	Open in IMG/M
3300002307\|JGI24890J29729_1004338	Not Available	4686	Open in IMG/M
3300003375\|JGI26470J50227_1007467	All Organisms → cellular organisms → Bacteria → Proteobacteria	2894	Open in IMG/M
3300003375\|JGI26470J50227_1007635	All Organisms → cellular organisms → Bacteria → Proteobacteria	2848	Open in IMG/M
3300003375\|JGI26470J50227_1007967	All Organisms → cellular organisms → Bacteria → Proteobacteria	2772	Open in IMG/M
3300003375\|JGI26470J50227_1008536	All Organisms → cellular organisms → Bacteria → Proteobacteria	2651	Open in IMG/M
3300003375\|JGI26470J50227_1012443	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2067	Open in IMG/M
3300003375\|JGI26470J50227_1032503	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1025	Open in IMG/M
3300003375\|JGI26470J50227_1033140	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1010	Open in IMG/M
3300003375\|JGI26470J50227_1038292	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	905	Open in IMG/M
3300003375\|JGI26470J50227_1039634	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	880	Open in IMG/M
3300003783\|Ga0007850_1000344	All Organisms → Viruses → Predicted Viral	4793	Open in IMG/M
3300003787\|Ga0007811_1000438	Not Available	6323	Open in IMG/M
3300003787\|Ga0007811_1000548	Not Available	5724	Open in IMG/M
3300003787\|Ga0007811_1002794	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2218	Open in IMG/M
3300003787\|Ga0007811_1018931	Not Available	601	Open in IMG/M
3300003789\|Ga0007835_1002945	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1951	Open in IMG/M
3300003800\|Ga0007860_1008259	Not Available	751	Open in IMG/M
3300003823\|Ga0007875_1002014	All Organisms → cellular organisms → Bacteria → Proteobacteria	2838	Open in IMG/M
3300004177\|Ga0066411_1000045	All Organisms → cellular organisms → Bacteria	18746	Open in IMG/M
3300004684\|Ga0065168_1020941	Not Available	1027	Open in IMG/M
3300004687\|Ga0065174_1004001	All Organisms → Viruses → Predicted Viral	2646	Open in IMG/M
3300004692\|Ga0065171_1003993	All Organisms → cellular organisms → Bacteria → Proteobacteria	2333	Open in IMG/M
3300004692\|Ga0065171_1029762	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	879	Open in IMG/M
3300004694\|Ga0065170_1000489	All Organisms → cellular organisms → Bacteria → Proteobacteria	5502	Open in IMG/M
3300004770\|Ga0007804_1057770	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1012	Open in IMG/M
3300004807\|Ga0007809_10103372	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	868	Open in IMG/M
3300005288\|Ga0065714_10288069	Not Available	712	Open in IMG/M
3300005468\|Ga0070707_102142549	Not Available	527	Open in IMG/M
3300005664\|Ga0073685_1024448	All Organisms → cellular organisms → Bacteria	1778	Open in IMG/M
3300006037\|Ga0075465_10003795	All Organisms → cellular organisms → Bacteria → Proteobacteria	2631	Open in IMG/M
3300006056\|Ga0075163_10100894	All Organisms → cellular organisms → Bacteria → Proteobacteria	3474	Open in IMG/M
3300006071\|Ga0007876_1003782	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4675	Open in IMG/M
3300006071\|Ga0007876_1004453	All Organisms → cellular organisms → Bacteria → Proteobacteria	4258	Open in IMG/M
3300006071\|Ga0007876_1016738	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2083	Open in IMG/M
3300006071\|Ga0007876_1038277	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1315	Open in IMG/M
3300006072\|Ga0007881_1123049	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	640	Open in IMG/M
3300006072\|Ga0007881_1128429	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	625	Open in IMG/M
3300006104\|Ga0007882_10179068	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	732	Open in IMG/M
3300006105\|Ga0007819_1084356	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	642	Open in IMG/M
3300006123\|Ga0007852_1129804	Not Available	545	Open in IMG/M
3300006128\|Ga0007828_1011926	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1845	Open in IMG/M
3300006805\|Ga0075464_10463603	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	774	Open in IMG/M
3300006917\|Ga0075472_10608121	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Alcaligenaceae	548	Open in IMG/M
3300006920\|Ga0070748_1049407	All Organisms → cellular organisms → Bacteria → Proteobacteria	1675	Open in IMG/M
3300007363\|Ga0075458_10058985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1204	Open in IMG/M
3300007363\|Ga0075458_10090970	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300008120\|Ga0114355_1205287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	629	Open in IMG/M
3300008266\|Ga0114363_1002639	Not Available	9962	Open in IMG/M
3300008267\|Ga0114364_1016119	All Organisms → cellular organisms → Bacteria → Proteobacteria	3229	Open in IMG/M
3300008448\|Ga0114876_1118878	Not Available	1017	Open in IMG/M
3300009175\|Ga0073936_10005907	Not Available	16353	Open in IMG/M
3300009502\|Ga0114951_10129279	All Organisms → Viruses → Predicted Viral	1408	Open in IMG/M
3300009676\|Ga0116187_1186303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	980	Open in IMG/M
3300010342\|Ga0116252_10297869	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Protostomia → Ecdysozoa → Nematoda → Chromadorea → Rhabditida → Rhabditina → Rhabditomorpha → Rhabditoidea → Rhabditidae → Peloderinae → Caenorhabditis → Caenorhabditis remanei	957	Open in IMG/M
3300011009\|Ga0129318_10256202	Not Available	580	Open in IMG/M
3300011011\|Ga0139556_1040329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus pneumoniae	688	Open in IMG/M
3300012018\|Ga0119867_1166848	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Acidovorax	585	Open in IMG/M
3300012956\|Ga0154020_10860750	Not Available	711	Open in IMG/M
3300013093\|Ga0164296_1047411	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2107	Open in IMG/M
3300013800\|Ga0119898_1050005	Not Available	527	Open in IMG/M
3300014960\|Ga0134316_1008177	All Organisms → Viruses → Predicted Viral	1112	Open in IMG/M
3300017700\|Ga0181339_1000085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	37806	Open in IMG/M
3300017736\|Ga0181365_1000008	Not Available	37517	Open in IMG/M
3300019784\|Ga0181359_1079685	All Organisms → Viruses → Predicted Viral	1229	Open in IMG/M
3300020686\|Ga0214194_102260	All Organisms → cellular organisms → Bacteria → Proteobacteria	2029	Open in IMG/M
3300020686\|Ga0214194_102481	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1911	Open in IMG/M
3300020707\|Ga0214238_1023646	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	694	Open in IMG/M
3300020710\|Ga0214198_1000076	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	29262	Open in IMG/M
3300020710\|Ga0214198_1006393	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1610	Open in IMG/M
3300020711\|Ga0214237_1002550	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3320	Open in IMG/M
3300020714\|Ga0214182_1010485	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1609	Open in IMG/M
3300020716\|Ga0214207_1000073	Not Available	32070	Open in IMG/M
3300020716\|Ga0214207_1013101	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1064	Open in IMG/M
3300020729\|Ga0214251_1016585	Not Available	1357	Open in IMG/M
3300020731\|Ga0214170_1021946	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1087	Open in IMG/M
3300020733\|Ga0214172_1015426	All Organisms → cellular organisms → Bacteria → Proteobacteria	1326	Open in IMG/M
3300021124\|Ga0214199_1002549	All Organisms → Viruses → Predicted Viral	2768	Open in IMG/M
3300021127\|Ga0214193_1027190	Not Available	679	Open in IMG/M
3300021131\|Ga0214206_1001885	Not Available	4641	Open in IMG/M
3300021131\|Ga0214206_1013016	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1130	Open in IMG/M
3300021133\|Ga0214175_1001665	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	4796	Open in IMG/M
3300021135\|Ga0214247_1015305	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1464	Open in IMG/M
3300021136\|Ga0214167_1042985	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	959	Open in IMG/M
3300021138\|Ga0214164_1009433	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3502	Open in IMG/M
3300021139\|Ga0214166_1035201	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1159	Open in IMG/M
3300021142\|Ga0214192_1015323	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	2895	Open in IMG/M
3300021440\|Ga0213919_1095933	Not Available	613	Open in IMG/M
3300022555\|Ga0212088_10007900	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	18062	Open in IMG/M
3300022602\|Ga0248169_104874	Not Available	13813	Open in IMG/M
3300022744\|Ga0228700_1021160	All Organisms → Viruses → Predicted Viral	1659	Open in IMG/M
3300022744\|Ga0228700_1087341	Not Available	646	Open in IMG/M
3300024958\|Ga0208263_108219	All Organisms → Viruses → Predicted Viral	2209	Open in IMG/M
3300025357\|Ga0208383_1013946	Not Available	990	Open in IMG/M
3300025358\|Ga0208504_1000108	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	21342	Open in IMG/M
3300025358\|Ga0208504_1034775	Not Available	633	Open in IMG/M
3300025366\|Ga0208505_1000358	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	9264	Open in IMG/M
3300025369\|Ga0208382_1009225	All Organisms → Viruses → Predicted Viral	1622	Open in IMG/M
3300025372\|Ga0207957_1012734	All Organisms → Viruses → Predicted Viral	1120	Open in IMG/M
3300025379\|Ga0208738_1000953	Not Available	6903	Open in IMG/M
3300025379\|Ga0208738_1003307	Not Available	3223	Open in IMG/M
3300025379\|Ga0208738_1005298	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2403	Open in IMG/M
3300025383\|Ga0208250_1000482	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	11681	Open in IMG/M
3300025383\|Ga0208250_1010813	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1701	Open in IMG/M
3300025402\|Ga0208876_1033190	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	826	Open in IMG/M
3300025407\|Ga0208378_1000096	Not Available	32987	Open in IMG/M
3300025407\|Ga0208378_1000121	Not Available	28894	Open in IMG/M
3300025407\|Ga0208378_1001645	Not Available	6201	Open in IMG/M
3300025410\|Ga0208875_1035226	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	814	Open in IMG/M
3300025413\|Ga0208614_1019122	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1134	Open in IMG/M
3300025417\|Ga0208616_1001135	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	6022	Open in IMG/M
3300025451\|Ga0208426_1002260	All Organisms → cellular organisms → Bacteria → Proteobacteria	2691	Open in IMG/M
3300025720\|Ga0208197_1225635	Not Available	567	Open in IMG/M
3300025779\|Ga0208869_1002213	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	3679	Open in IMG/M
3300025896\|Ga0208916_10083407	All Organisms → Viruses → Predicted Viral	1341	Open in IMG/M
3300025910\|Ga0207684_11398092	Not Available	573	Open in IMG/M
3300027911\|Ga0209698_10070905	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	2980	Open in IMG/M
3300031758\|Ga0315907_10064031	All Organisms → Viruses → Predicted Viral	3200	Open in IMG/M
3300031759\|Ga0316219_1010962	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	5130	Open in IMG/M
3300031759\|Ga0316219_1130233	Not Available	943	Open in IMG/M
3300031759\|Ga0316219_1169626	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	797	Open in IMG/M
3300031813\|Ga0316217_10007486	All Organisms → cellular organisms → Bacteria → Proteobacteria	10412	Open in IMG/M
3300031813\|Ga0316217_10133769	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage	1088	Open in IMG/M
3300031857\|Ga0315909_10001170	All Organisms → cellular organisms → Bacteria → Proteobacteria	35552	Open in IMG/M
3300032665\|Ga0316221_1020483	Not Available	3218	Open in IMG/M
3300032675\|Ga0316225_1199946	Not Available	621	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.03%
Engineered	Engineered	7.25%
Host-Associated	Host-Associated	0.72%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	90.58%
Wastewater	Engineered → Wastewater	7.25%
Terrestrial	Environmental → Terrestrial	1.45%
Plants	Host-Associated → Plants	0.72%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	82.61%
Marine	Environmental → Aquatic → Marine	7.25%
Activated Sludge	Engineered → Wastewater → Activated Sludge	2.17%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	2.17%
Nutrient Removal	Engineered → Wastewater → Nutrient Removal	2.17%
Soil	Environmental → Terrestrial → Soil	1.45%
Sediment	Environmental → Aquatic → Sediment	0.72%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.72%

Habitat	Taxonomy	Distribution
Lentic	Environmental → Aquatic → Freshwater → Lentic	67.39%
Lake	Environmental → Aquatic → Freshwater → Lake	7.25%
Coastal	Environmental → Aquatic → Marine → Coastal	7.25%
Creek	Environmental → Aquatic → Freshwater → Creek	2.17%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	2.17%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	2.17%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified	2.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	1.45%
Ice	Environmental → Aquatic → Freshwater → Ice	1.45%
Loam	Environmental → Terrestrial → Soil → Loam	1.45%
Lotic	Environmental → Aquatic → Freshwater → Lotic	0.72%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.72%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	41.30%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	16.67%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	9.42%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	7.25%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	7.25%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	2.17%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	2.17%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	2.17%
Unclassified	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified	2.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	1.45%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	0.72%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.72%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.72%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	38.41%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Freshwater	16.67%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	9.42%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	6.52%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	2.17%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.17%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	2.17%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	2.17%
Wastewater Effluent	Engineered → Wastewater → Nutrient Removal → Unclassified → Unclassified → Wastewater Effluent	2.17%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.45%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	1.45%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.45%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.45%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	1.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.45%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	1.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.72%
Freshwater	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater	0.72%
Lentic	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Lentic	0.72%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	0.72%
Aquatic	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Aquatic	0.72%
Surface Water	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water	0.72%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	0.72%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Activated Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Activated Sludge	0.72%
Wastewater	Engineered → Wastewater → Industrial Wastewater → Unclassified → Unclassified → Wastewater	0.72%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000176	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300000203	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300000439	Trout Bog Lake June 7 2007 Epilimnion (Trout Bog Lake Combined Assembly 48 Epilimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300000553	Trout Bog Lake May 28 2007 Hypolimnion (Trout Bog Lake Combined Assembly 47 Hypolimnion Samples, Aug 2012 Assem)	Environmental	Open in IMG/M
3300002307	Lentic bog actinobacteria communities from Grosse Fuchskuhle, Germany - Sample acI-C2 co-culture F-D7	Environmental	Open in IMG/M
3300003375	Freshwater actinobacteria microbial communities from Trout Bog Lake, Wisconsin, USA - enrichment TB-E6	Environmental	Open in IMG/M
3300003783	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08	Environmental	Open in IMG/M
3300003787	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09	Environmental	Open in IMG/M
3300003789	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08	Environmental	Open in IMG/M
3300003800	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jul08	Environmental	Open in IMG/M
3300003823	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH18Aug09	Environmental	Open in IMG/M
3300004177	Freshwater sediment methanotrophic microbial communities from Lake Washington under simulated oxygen tension - Sediment Metagenome 15_LOW5	Environmental	Open in IMG/M
3300004684	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (version 2)	Environmental	Open in IMG/M
3300004687	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Jul08 (version 2)	Environmental	Open in IMG/M
3300004692	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun07 (version 2)	Environmental	Open in IMG/M
3300004694	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE17Sep08 (version 2)	Environmental	Open in IMG/M
3300004770	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE25Aug07	Environmental	Open in IMG/M
3300004807	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE02Aug07	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005664	Freshwater viral communities from Emiquon reservoir, Havana, Illinois, USA	Environmental	Open in IMG/M
3300006037	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_>0.8_DNA	Environmental	Open in IMG/M
3300006056	Wastewater effluent complex algal communities from Wisconsin, to seasonally profile nutrient transformation and Carbon sequestration - JI 10/23/14 1A DNA	Engineered	Open in IMG/M
3300006071	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH24Aug09	Environmental	Open in IMG/M
3300006072	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09	Environmental	Open in IMG/M
3300006104	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug09.1	Environmental	Open in IMG/M
3300006105	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE07Jul09	Environmental	Open in IMG/M
3300006123	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH28Sep08	Environmental	Open in IMG/M
3300006128	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007363	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA	Environmental	Open in IMG/M
3300007516	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01	Environmental	Open in IMG/M
3300007722	Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-02 (megahit assembly)	Environmental	Open in IMG/M
3300008120	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300008267	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, sample HABS-E2014-0024-100-LTR	Environmental	Open in IMG/M
3300008448	Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - August 4, 2014 all contigs	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009676	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA6_MetaG	Engineered	Open in IMG/M
3300010342	AD_JPNAca1	Engineered	Open in IMG/M
3300011009	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_0.1_0.8_DNA	Environmental	Open in IMG/M
3300011011	Freshwater microbial communities from Western Basin Lake Erie, Ontario, Canada - Station 970 - Top - Depth 1m	Environmental	Open in IMG/M
3300012018	Activated sludge microbial communities from Shanghai, China - membrane bioreactor - Activated sludge (MBR)	Engineered	Open in IMG/M
3300012956	Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MG	Engineered	Open in IMG/M
3300013093	Dystrophic lake water microbial communities from Trout Bog Lake, Wisconsin, USA - GEODES057 metaG	Environmental	Open in IMG/M
3300013800	Wastewater microbial communities from municipal sewage treatment plant in Nanjing, China - ZZ_EW_meta	Engineered	Open in IMG/M
3300014960	Surface water microbial communities from Bangladesh - BaraHaldiaSW0709	Environmental	Open in IMG/M
3300017700	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.D.D	Environmental	Open in IMG/M
3300017736	Freshwater viral communities from Lake Michigan, USA - Fa13.ND.MM110.D.N	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300020686	Freshwater microbial communities from Trout Bog Lake, WI - 12AUG2008 epilimnion	Environmental	Open in IMG/M
3300020707	Freshwater microbial communities from Trout Bog Lake, WI - 05AUG2008 hypolimnion	Environmental	Open in IMG/M
3300020710	Freshwater microbial communities from Trout Bog Lake, WI - 20SEP2008 epilimnion	Environmental	Open in IMG/M
3300020711	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 hypolimnion	Environmental	Open in IMG/M
3300020714	Freshwater microbial communities from Trout Bog Lake, WI - 14NOV2007 epilimnion	Environmental	Open in IMG/M
3300020716	Freshwater microbial communities from Trout Bog Lake, WI - 13JUL2009 epilimnion	Environmental	Open in IMG/M
3300020729	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 hypolimnion	Environmental	Open in IMG/M
3300020731	Freshwater microbial communities from Trout Bog Lake, WI - 27JUN2007 epilimnion	Environmental	Open in IMG/M
3300020733	Freshwater microbial communities from Trout Bog Lake, WI - 12JUL2007 epilimnion	Environmental	Open in IMG/M
3300021124	Freshwater microbial communities from Trout Bog Lake, WI - 04OCT2008 epilimnion	Environmental	Open in IMG/M
3300021127	Freshwater microbial communities from Trout Bog Lake, WI - 05AUG2008 epilimnion	Environmental	Open in IMG/M
3300021131	Freshwater microbial communities from Trout Bog Lake, WI - 07JUL2009 epilimnion	Environmental	Open in IMG/M
3300021133	Freshwater microbial communities from Trout Bog Lake, WI - 09AUG2007 epilimnion	Environmental	Open in IMG/M
3300021135	Freshwater microbial communities from Trout Bog Lake, WI - 03JUN2009 hypolimnion	Environmental	Open in IMG/M
3300021136	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 hypolimnion	Environmental	Open in IMG/M
3300021138	Freshwater microbial communities from Trout Bog Lake, WI - Practice 03JUN2009 epilimnion	Environmental	Open in IMG/M
3300021139	Freshwater microbial communities from Trout Bog Lake, WI - Practice 18AUG2009 epilimnion	Environmental	Open in IMG/M
3300021142	Freshwater microbial communities from Trout Bog Lake, WI - 29JUL2008 epilimnion	Environmental	Open in IMG/M
3300021440	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 3-17 MG	Environmental	Open in IMG/M
3300022555	Alinen_combined assembly	Environmental	Open in IMG/M
3300022602	Freshwater microbial communities from Trout Bog Lake, Vilas County, Wisconsin, United States - 30JULY2014 epilimnion	Environmental	Open in IMG/M
3300022744	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 3-17_Aug_MG	Environmental	Open in IMG/M
3300024958	Freshwater sediment methanotrophic microbial communities from Lake Washington under simulated oxygen tension - Sediment Metagenome 28_LOW6 (SPAdes)	Environmental	Open in IMG/M
3300025357	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE10Sep07 (SPAdes)	Environmental	Open in IMG/M
3300025358	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH05Oct08 (SPAdes)	Environmental	Open in IMG/M
3300025366	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH15Jul08 (SPAdes)	Environmental	Open in IMG/M
3300025369	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE28Sep08 (SPAdes)	Environmental	Open in IMG/M
3300025372	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH27Jun07 (SPAdes)	Environmental	Open in IMG/M
3300025379	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE21Jul09 (SPAdes)	Environmental	Open in IMG/M
3300025383	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE18Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025402	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH03Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025407	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE24Aug09 (SPAdes)	Environmental	Open in IMG/M
3300025410	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH25Aug08 (SPAdes)	Environmental	Open in IMG/M
3300025413	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE23Jun09 (SPAdes)	Environmental	Open in IMG/M
3300025417	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE16Oct07 (SPAdes)	Environmental	Open in IMG/M
3300025451	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025720	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from Japan - AD_JPNNA4_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025779	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBE27Jun08 (SPAdes)	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031759	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18003P	Environmental	Open in IMG/M
3300031813	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - 1anoA	Environmental	Open in IMG/M
3300031857	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125	Environmental	Open in IMG/M
3300032665	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18007	Environmental	Open in IMG/M
3300032675	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18015	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.67
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.67
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F055534

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
TB03JUN2009E_0136151	3300000176	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPFTTITWALWVLGDAVGI*
TB18AUG2009E_00035622	3300000203	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPFTTITWALWVLGDA
TBL_comb48_EPIDRAFT_10126868	3300000439	Freshwater	MRDHYNFEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGLR*
TBL_comb48_EPIDRAFT_10158979	3300000439	Freshwater	MRNHYNLEELEAARILDLVRLGDDTVPCSVITWALFVLGDAIGCN*
TBL_comb48_EPIDRAFT_10266173	3300000439	Freshwater	MRNHYNYEELEAAQILDLVRMGDDSVPWTAITWALWVLGDAVGN*
TBL_comb48_EPIDRAFT_10281037	3300000439	Freshwater	MRNHYNLEELEAARILDLVRMGDDSVPWTAITWALWVLGDAIGLS*
TBL_comb47_HYPODRAFT_1003940311	3300000553	Freshwater	MRDNYNHEELEAARILDLVRMGDDSVPFTTITWCLWVLGDAVGH*
JGI24890J29729_10043388	3300002307	Lentic	MREHYNDEEKEAARXLDLVRMGDETVPWSVITWSLWVLGDAVGH*
JGI26470J50227_10074676	3300003375	Freshwater	MRDHYNFEELEAARILDLVRMGDKTIPWTVITWALWCLGDAVGQ*
JGI26470J50227_10076354	3300003375	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPCSVITWALWVLGDAVGN*
JGI26470J50227_10079677	3300003375	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPFTTITWCLWVLGDAVGH*
JGI26470J50227_10085363	3300003375	Freshwater	MRNHYNFEELEAARILDLVRLGDDTVPCSVITWALFVLGDAIGCN*
JGI26470J50227_10124433	3300003375	Freshwater	MRDHYNHEELEAARILDLVRMGDDSVPFTTITWCLWVLGDAVGN*
JGI26470J50227_10325032	3300003375	Freshwater	MRNYYNHEELEAARILDLVRMGDDSVPWTAITWALFVLGDAVGLR*
JGI26470J50227_10331401	3300003375	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGN*
JGI26470J50227_10382923	3300003375	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPWTTITWALWVLGDAVGN*
JGI26470J50227_10396341	3300003375	Freshwater	MRNHYNHEELEAARILDLVRMGDNSVPWTAITWALWVLGDAVGN*
Ga0007850_100034413	3300003783	Freshwater	MREHYNDEEREAARILDLVRMGDKNIPRSVINWALWCLGDAVGQ*
Ga0007811_100043818	3300003787	Freshwater	MRNNYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGH*
Ga0007811_100054810	3300003787	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGI*
Ga0007811_10027945	3300003787	Freshwater	MRDHYNFEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGH*
Ga0007811_10189311	3300003787	Freshwater	MRDHYNFEELEAARILDLVRMGDDSVPWTTITWALWVLGDAVGI*
Ga0007835_10029456	3300003789	Freshwater	MREHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGQ*
Ga0007860_10082591	3300003800	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAV
Ga0007875_10020145	3300003823	Freshwater	MRDHYNHEELEAARILDLIRMGDDSVPWTTITWALFVLGDAVGLR*
Ga0066411_100004512	3300004177	Freshwater Sediment	MRNLMNEEEREASHILDLIRYGGDVPASAITWALWVLGDLEAL*
Ga0065168_10209414	3300004684	Freshwater	MRDHYNFEELEAAQILDLVRMGDDSVPWTTITWALWVLGDAVGN*
Ga0065174_10040013	3300004687	Freshwater	MRDHYNHEELEAARILDLVRIGDDSVPWTAITWALWVLGDAVGI*
Ga0065171_10039934	3300004692	Freshwater	MRDHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGI*
Ga0065171_10297623	3300004692	Freshwater	MRNHYNHEELEAARILDLVRMGDETVPCSIITWALFVLGDAIGCQ*
Ga0065170_10004895	3300004694	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAIGLS*
Ga0007804_10577704	3300004770	Freshwater	MRDHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGQ*
Ga0007809_101033723	3300004807	Freshwater	MRDQYDYEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGH*
Ga0065714_102880692	3300005288	Miscanthus Rhizosphere	MRDQYNHEELEAARILDLARAGGDVPASAITWSLWILGDLVGARQ*
Ga0070707_1021425493	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	EGGERMRDQYNHEELEAARILDLARAGGDVPDSAITWSLWILGDLVGVAQ*
Ga0073685_10244483	3300005664	Aquatic	MRTHMNHEELEASRLLDFARAGGDVPATTITWALWVLGDLVEVAA*
Ga0075465_100037952	3300006037	Aqueous	MRSNYNPEEREAARVLDLARAGGDVPASTVTWALWVLGDLVGVA*
Ga0075465_101416652	3300006037	Aqueous	MRSHYNHEEREAASVLDLARAGGDVPASTVTWALWVLGDLVGVA*
Ga0075163_101008944	3300006056	Wastewater Effluent	MRQHMNHEELEASRILDLARAGGDVPVSTITWALWVLGDMSQWPG*
Ga0075163_101096151	3300006056	Wastewater Effluent	MRNNMNDEELEASRILDLVRAGGDVPDSVIIWALWTTGDLVGQ*
Ga0075163_101382402	3300006056	Wastewater Effluent	MNHEELEASRILDFAKAGGEVPDSTITWALWVLGDMSQWPG*
Ga0007876_10037827	3300006071	Freshwater	MRENYNHEELEAARILDLVRMGDNTVPWTTITWALWVLGDAVGN*
Ga0007876_10044538	3300006071	Freshwater	MRDHYNHEELEAARILDLVRMGDDSVPFTTITWCLWVLGDAIGN*
Ga0007876_10167387	3300006071	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPWTTITWALWVLGDAVGI*
Ga0007876_10382773	3300006071	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVG
Ga0007881_11230491	3300006072	Freshwater	GVNLMRDHYNFEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGH*
Ga0007881_11284292	3300006072	Freshwater	MRDHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGN*
Ga0007882_101790683	3300006104	Freshwater	VDGVNLMRDHYNFEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGH*
Ga0007819_10843561	3300006105	Freshwater	DGVNLMRDHYNFEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGH*
Ga0007852_11298041	3300006123	Freshwater	EELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGI*
Ga0007828_10119263	3300006128	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPFTTITWALWVLGDAVGN*
Ga0075464_104636033	3300006805	Aqueous	HYNYEEREAARILDLVRAGGDAPESVITWALWVLGDFIGG*
Ga0075472_106081211	3300006917	Aqueous	DCTNEGVSMRNHYNYEEREAARILDLVRAGGDAPESVITWALWVLGDFIGG*
Ga0070748_10494072	3300006920	Aqueous	MRNQYNQEELEASRILDLVRAGGDVPATTVTWALWVLGDLVGQ*
Ga0075458_100589852	3300007363	Aqueous	MRNHYNYEEREAARILDLVRAGGDAPESVITWALWVLGDFIGG*
Ga0075458_100909701	3300007363	Aqueous	MRNHYNYEEREAARILDLVRAGGDAPESVITWALWVL
Ga0105050_104236421	3300007516	Freshwater	MRDHMNHEELEAAHILDWLREGGDVPDSTVVWCLFVLGDLDSLRDFY*
Ga0105051_102618781	3300007722	Freshwater	MRDHMNHEELEAAHILDWLREGGDVPDSTVVWCLWVLGDLE
Ga0114355_12052872	3300008120	Freshwater, Plankton	MRDQFNHEELEAMRILDAVKAGIDVPATAITWALWVTGDLVGQAA*
Ga0114363_100263915	3300008266	Freshwater, Plankton	MRDQFNHEELEAMRILDAVKAGIDVPETAITWALWVTGDLVGQAA*
Ga0114364_10161195	3300008267	Freshwater, Plankton	MRNTYNHEELEAARILDLARIGGDVPDSAITWALWTLGDLVGCV*
Ga0114876_11188782	3300008448	Freshwater Lake	MRNNYNEEEKEATRILDLARAGGDVPESTITWALWVLGDLVG*
Ga0073936_100059073	3300009175	Freshwater Lake Hypolimnion	MREHYNDEEKEAARILDLVRMGDETVPWSVITWSLWVLGDAVGH*
Ga0114951_101292795	3300009502	Freshwater	YNDEEKEAARILDLVRMGDKTVPWSVITWSLWVLGDAVGH*
Ga0116187_11863032	3300009676	Anaerobic Digestor Sludge	MRQHMNHEELEASRILDLARAGGDVPASTITWALWVLGDLVQWSQ*
Ga0116252_102978693	3300010342	Anaerobic Digestor Sludge	MNHEELEASRILDLARAGGDVPASTITWALWVLGDLVQWSQ*
Ga0129318_102562021	3300011009	Freshwater To Marine Saline Gradient	GPREERTASMRQHMNHEELEASRILDLARAGGDVPVSTITWALWVLGDMSQWPG*
Ga0139556_10403291	3300011011	Freshwater	MRQHMNYEELEASRILDLALNGGDVPDSVITWALF
Ga0119867_11668482	3300012018	Activated Sludge	MRNLYNDEEREAARILDLVRIGGDVPESAVTWALWVLGDLVGMNNA*
Ga0154020_103603443	3300012956	Active Sludge	MNHEELEASHVLDLARAGGDVPDSVVIWALWVLGDLERM*
Ga0154020_108607502	3300012956	Active Sludge	MRQHMNHEELEASRILDLARAGGDVPASTITWALWVLGDMSQWPG*
Ga0164296_10474113	3300013093	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGH*
Ga0119898_10500052	3300013800	Wastewater	MRANMNHEEMEASRLLDFARAGGDVPDTAITWALWTLGD
Ga0134316_10081772	3300014960	Surface Water	LRDKYNHEELEAARILDLVKVGGEVTEDTITWALWVLGDLVGV*
Ga0181339_100008542	3300017700	Freshwater Lake	MRNHYNHEELEASRILDLARAGGDVPGSVVTWALWVLGDLVGL
Ga0181365_100000863	3300017736	Freshwater Lake	MRNTYNHDELEASRILDLARIGGDVPESAITWALWTLGDLVGVAA
Ga0181359_10796852	3300019784	Freshwater Lake	MRKNLNYEEKEAMRILDAVKFGIDIPESLINWALWVCGDLVGQQS
Ga0214194_1022604	3300020686	Freshwater	MRNHYNYEELEAAQILDLVRMGDDSVPWTAITWALWVLGDAVGN
Ga0214194_1024816	3300020686	Freshwater	MRDHYNFEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGLR
Ga0214238_10236462	3300020707	Freshwater	MRDNYNHEELEAARILDLVRMGDDSVPFTTITWCLWVLGDAVGH
Ga0214198_100007634	3300020710	Freshwater	MRDHYNFEELEAARILDLVRMGDKTIPWTVITWALWCLGDAVGQ
Ga0214198_10063934	3300020710	Freshwater	MRSHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGN
Ga0214237_10025503	3300020711	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGH
Ga0214182_10104851	3300020714	Freshwater	ELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGN
Ga0214207_100007351	3300020716	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPFTTITWALWVLGDAVGI
Ga0214207_10131011	3300020716	Freshwater	MRNYYNHEELEAARILDLVRMGDDSVPWTAITWALFVLGDAVGLR
Ga0214251_10165853	3300020729	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGI
Ga0214170_10219463	3300020731	Freshwater	MRDHYNFEELEAARILDLVRLGDDSVPWTAITWALWVLGDAVGI
Ga0214172_10154265	3300020733	Freshwater	EELEAARILDLVRLGDDSVPWTAITWALWVLGDAVGI
Ga0214199_10025491	3300021124	Freshwater	VVGVNLMRDHYNFEELEAARILDLVRMGDKTIPWTVITWALWCLGDAVGQ
Ga0214193_10271903	3300021127	Freshwater	MRDHYNHEELEAARILDLVRMGDDSVPWTAITWALF
Ga0214206_10018853	3300021131	Freshwater	MRNHYNLEELEAARILDLVRMGDDSVPWTAITWALWVLGDAIGLS
Ga0214206_10130161	3300021131	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAIG
Ga0214175_10016657	3300021133	Freshwater	MRDHYNHEELEAARILDLVRMGDDSVPFTTITWCLWVLGDAVGH
Ga0214247_10153053	3300021135	Freshwater	MRNYYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGN
Ga0214167_10429853	3300021136	Freshwater	MRNYYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGH
Ga0214164_10094336	3300021138	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPCSVITWALWVLGDAVGN
Ga0214166_10352013	3300021139	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAIGLS
Ga0214192_10153232	3300021142	Freshwater	MRNHYNHEELEAARILDLVRLGDETVPCSIITWALFVLGDAIGCQ
Ga0213919_10959332	3300021440	Freshwater	MRNHMNYEELEASRILDLARAGEDVPETVIVWAFLVLGDMQRIWNG
Ga0212088_100079009	3300022555	Freshwater Lake Hypolimnion	MREHYNDEEKEAARILDLVRMGDETVPWSVITWSLWVLGDAVGH
Ga0248169_10487418	3300022602	Freshwater	MRDHYNHEELEAARILDLVRMGDDSVPFTTITWCLWVLGDAVGN
Ga0228700_10211601	3300022744	Freshwater	MRDHLNHEELEAMRILDAARVGIDVPESAITWALWVTGDLVGQPA
Ga0228700_10873412	3300022744	Freshwater	MRDQYNHEEREAARILDLARAGGDVPESVITWALWCMGDLVGT
Ga0208263_1082192	3300024958	Freshwater	MRNLMNEEEREASHILDLIRYGGDVPASAITWALWVLGDLEAL
Ga0208383_10139463	3300025357	Freshwater	MRNHYNHEELEAAQILDLVRMGDDSVPWTAITWALWVLGDAVGN
Ga0208504_100010817	3300025358	Freshwater	MREHYNDEEREAARILDLVRMGDKNIPRSVINWALWCLGDAVGQ
Ga0208504_10347753	3300025358	Freshwater	MREHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGQ
Ga0208505_10003582	3300025366	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGN
Ga0208382_10092255	3300025369	Freshwater	HEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGI
Ga0207957_10127344	3300025372	Freshwater	MRDHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGI
Ga0208738_100095319	3300025379	Freshwater	MRNNYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGH
Ga0208738_10033074	3300025379	Freshwater	MRDHYNFEELEAARILDLVRMGDDSVPWTTITWALWVLGDAVGI
Ga0208738_10052985	3300025379	Freshwater	MRDHYNFEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGH
Ga0208250_100048217	3300025383	Freshwater	MRDHYNHEELEAARILDLIRMGDDSVPWTTITWALFVLGDAVGLR
Ga0208250_10108133	3300025383	Freshwater	MRDHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGN
Ga0208876_10331902	3300025402	Freshwater	MRDDYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGI
Ga0208378_100009622	3300025407	Freshwater	MRENYNHEELEAARILDLVRMGDNTVPWTTITWALWVLGDAVGN
Ga0208378_100012120	3300025407	Freshwater	MRDHYNHEELEAARILDLVRMGDDSVPFTTITWCLWVLGDAIGN
Ga0208378_100164511	3300025407	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPWTTITWALWVLGDAVGI
Ga0208875_10352263	3300025410	Freshwater	MRDHYNHEELEAARILDLVRIGDDSVPWTAITWALWVLGDAVGI
Ga0208614_10191224	3300025413	Freshwater	MRDHYNFEELEAAQILDLVRMGDDSVPWTTITWALWVLGDAVGN
Ga0208616_10011354	3300025417	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPFTTITWALWVLGDAVGN
Ga0208426_10022604	3300025451	Aqueous	MRSNYNPEEREAARVLDLARAGGDVPASTVTWALWVLGDLVGVA
Ga0208197_12256353	3300025720	Anaerobic Digestor Sludge	MRQHMNHEELEASRILDLARAGGDVPASTITWALWVLGDLVQWSQ
Ga0208869_10022138	3300025779	Freshwater	MRDHYNFEELEAARILDLVRMGDDSVPWTAITWALFVLGDAVGLR
Ga0208916_100834072	3300025896	Aqueous	MRQHMNHEELEASRILDLARAGGDVPVSTITWALWVLGDMSQWPG
Ga0207684_113980921	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRDQYNHEELEAARILDLARAGGDVPASVVTWALWCLGDLVGVRT
Ga0209698_100709058	3300027911	Watersheds	MRNHYNHEELEAARILDLVRMGDESVPFSTITWCLWVLGDAVGN
Ga0315907_100640317	3300031758	Freshwater	MRNNYNEEEKEATRILDLARAGGDVPESTITWALWVLGDLVG
Ga0316219_10109628	3300031759	Freshwater	MRNHYNLEELEAARILDLVRMGDDSVPFTTITWCLWVLGDAVGN
Ga0316219_11302332	3300031759	Freshwater	VRDHYNFEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGI
Ga0316219_11696261	3300031759	Freshwater	EELEAARILDLVRMGDDSVPWTAITWALWVLGDAVGI
Ga0316217_1000748620	3300031813	Freshwater	MRDHYNHEELEAARILDLVRMGDDSVPWTAITWALFVLGDAVGLR
Ga0316217_101337693	3300031813	Freshwater	MRNHYNHEEFEAARILDLVRMGDDSVPWTAITWALWVLGDAVGN
Ga0315909_100011706	3300031857	Freshwater	MRDQFNHEELEAMRILDAVKAGIDVPETAITWALWVTGDLVGQAA
Ga0316221_10204838	3300032665	Freshwater	MRNHYNHEELEAARILDLVRMGDDSVPWTAITWALWVLGDAVCN
Ga0316225_11999462	3300032675	Freshwater	MRENYNHEKLEAARILDLVRMGDSTVPWTAITWALWVLGDAVGH

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign