Metagenome / Metatranscriptome Family F055605

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055605
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	62 residues
Representative Sequence	LLAAQRAFINWESFLRPAGVSWPFFLAGVAVVPPLSLAQRALAAAESFARVEGEK
Number of Associated Samples	122
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	7.63 %
% of genes near scaffold ends (potentially truncated)	76.09 %
% of genes from short scaffolds (< 2000 bps)	79.71 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.203 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.188 % of family members)
Environment Ontology (ENVO)	Unclassified (36.232 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.971 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 56.63% β-sheet: 0.00% Coil/Unstructured: 43.37%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF01209	Ubie_methyltran	63.77
PF13424	TPR_12	5.07
PF14238	DUF4340	4.35
PF00550	PP-binding	0.72
PF12730	ABC2_membrane_4	0.72
PF01904	DUF72	0.72
PF13525	YfiO	0.72
PF04390	LptE	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	63.77
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	63.77
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	0.72
COG2980	Outer membrane lipoprotein LptE/RlpB (LPS assembly)	Cell wall/membrane/envelope biogenesis [M]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.20 %
Unclassified	root	N/A	5.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.20 %
Unclassified	root	N/A	5.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.20 %
Unclassified	root	N/A	5.80 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	88.41 %
Unclassified	root	N/A	5.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	88.41 %
Unclassified	root	N/A	5.80 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	57.97 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	11.59 %
Unclassified	root	N/A	5.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.97 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	10.87 %
Unclassified	root	N/A	5.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.97 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	10.87 %
Unclassified	root	N/A	5.80 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.97 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	5.80 %
Unclassified	root	N/A	5.80 %
Chthoniobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter	5.07 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	57.97 %
Unclassified	root	N/A	5.80 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	5.07 %
Chthoniobacter flavus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	5.07 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY01C1IUF	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300000956\|JGI10216J12902_118052116	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	767	Open in IMG/M
3300005178\|Ga0066688_10144732	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1485	Open in IMG/M
3300005180\|Ga0066685_10195365	All Organisms → cellular organisms → Bacteria	1387	Open in IMG/M
3300005332\|Ga0066388_100677584	All Organisms → cellular organisms → Bacteria	1642	Open in IMG/M
3300005354\|Ga0070675_100492263	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1104	Open in IMG/M
3300005434\|Ga0070709_10351740	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300005447\|Ga0066689_10385869	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	875	Open in IMG/M
3300005450\|Ga0066682_10373646	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	916	Open in IMG/M
3300005450\|Ga0066682_10889683	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	531	Open in IMG/M
3300005540\|Ga0066697_10158888	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1336	Open in IMG/M
3300005540\|Ga0066697_10508102	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	683	Open in IMG/M
3300005554\|Ga0066661_10114873	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1622	Open in IMG/M
3300005555\|Ga0066692_10396606	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	875	Open in IMG/M
3300005556\|Ga0066707_10513667	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	777	Open in IMG/M
3300005560\|Ga0066670_10032082	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2578	Open in IMG/M
3300005560\|Ga0066670_10146329	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1375	Open in IMG/M
3300005561\|Ga0066699_10171175	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1497	Open in IMG/M
3300005568\|Ga0066703_10250729	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1075	Open in IMG/M
3300005586\|Ga0066691_10147341	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1352	Open in IMG/M
3300005598\|Ga0066706_10026330	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3638	Open in IMG/M
3300005764\|Ga0066903_100892180	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1607	Open in IMG/M
3300006034\|Ga0066656_10131499	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1550	Open in IMG/M
3300006046\|Ga0066652_100171094	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1843	Open in IMG/M
3300006794\|Ga0066658_10707587	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	557	Open in IMG/M
3300009012\|Ga0066710_101661760	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	974	Open in IMG/M
3300009012\|Ga0066710_103006243	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300009802\|Ga0105073_1072207	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	501	Open in IMG/M
3300010046\|Ga0126384_12153155	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	536	Open in IMG/M
3300010047\|Ga0126382_10041346	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2624	Open in IMG/M
3300010301\|Ga0134070_10026305	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1910	Open in IMG/M
3300010320\|Ga0134109_10194229	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	747	Open in IMG/M
3300010325\|Ga0134064_10145499	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	815	Open in IMG/M
3300010329\|Ga0134111_10116026	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1038	Open in IMG/M
3300010333\|Ga0134080_10264815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	762	Open in IMG/M
3300010336\|Ga0134071_10009520	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3857	Open in IMG/M
3300010362\|Ga0126377_11097604	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	864	Open in IMG/M
3300010366\|Ga0126379_11370462	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	813	Open in IMG/M
3300010366\|Ga0126379_12065767	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	672	Open in IMG/M
3300010371\|Ga0134125_10249823	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1971	Open in IMG/M
3300010398\|Ga0126383_10170821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2053	Open in IMG/M
3300012096\|Ga0137389_11204014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300012199\|Ga0137383_11368165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	502	Open in IMG/M
3300012204\|Ga0137374_10719645	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	748	Open in IMG/M
3300012206\|Ga0137380_10463387	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1119	Open in IMG/M
3300012208\|Ga0137376_11219207	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	642	Open in IMG/M
3300012210\|Ga0137378_10585362	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1025	Open in IMG/M
3300012285\|Ga0137370_10944835	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300012353\|Ga0137367_10571235	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	793	Open in IMG/M
3300012354\|Ga0137366_10487754	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	891	Open in IMG/M
3300012354\|Ga0137366_10702315	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	721	Open in IMG/M
3300012354\|Ga0137366_11243181	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300012357\|Ga0137384_10807724	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	758	Open in IMG/M
3300012362\|Ga0137361_10649805	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	965	Open in IMG/M
3300012532\|Ga0137373_10250983	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1428	Open in IMG/M
3300012899\|Ga0157299_10271378	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	548	Open in IMG/M
3300012911\|Ga0157301_10219196	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	651	Open in IMG/M
3300012918\|Ga0137396_11207424	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300012923\|Ga0137359_10098500	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2580	Open in IMG/M
3300012927\|Ga0137416_10865765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	802	Open in IMG/M
3300012929\|Ga0137404_10050711	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	3179	Open in IMG/M
3300012929\|Ga0137404_10637685	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	960	Open in IMG/M
3300012972\|Ga0134077_10545675	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	519	Open in IMG/M
3300015053\|Ga0137405_1246406	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	994	Open in IMG/M
3300015264\|Ga0137403_10181720	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2048	Open in IMG/M
3300015356\|Ga0134073_10039321	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300015356\|Ga0134073_10151623	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	733	Open in IMG/M
3300015356\|Ga0134073_10172347	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	700	Open in IMG/M
3300016319\|Ga0182033_10132236	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1896	Open in IMG/M
3300016341\|Ga0182035_11821939	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300016445\|Ga0182038_10715984	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	872	Open in IMG/M
3300017656\|Ga0134112_10050055	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1512	Open in IMG/M
3300017656\|Ga0134112_10077925	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1228	Open in IMG/M
3300017656\|Ga0134112_10147112	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	905	Open in IMG/M
3300018066\|Ga0184617_1024282	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300018075\|Ga0184632_10039821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2019	Open in IMG/M
3300018468\|Ga0066662_11007429	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	825	Open in IMG/M
3300018482\|Ga0066669_10011228	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	4579	Open in IMG/M
3300018482\|Ga0066669_10060003	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	2456	Open in IMG/M
3300019361\|Ga0173482_10517585	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300019875\|Ga0193701_1008791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	1976	Open in IMG/M
3300019882\|Ga0193713_1188493	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300019883\|Ga0193725_1053645	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1025	Open in IMG/M
3300019886\|Ga0193727_1006555	All Organisms → cellular organisms → Bacteria	4677	Open in IMG/M
3300019887\|Ga0193729_1012612	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3785	Open in IMG/M
3300020006\|Ga0193735_1046244	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1302	Open in IMG/M
3300020006\|Ga0193735_1072598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	992	Open in IMG/M
3300021078\|Ga0210381_10141642	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	810	Open in IMG/M
3300021080\|Ga0210382_10279469	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	733	Open in IMG/M
3300021344\|Ga0193719_10118229	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1152	Open in IMG/M
3300022694\|Ga0222623_10290428	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	628	Open in IMG/M
3300025922\|Ga0207646_11093476	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	702	Open in IMG/M
3300025926\|Ga0207659_10391949	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1160	Open in IMG/M
3300026317\|Ga0209154_1055761	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1749	Open in IMG/M
3300026324\|Ga0209470_1143728	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1050	Open in IMG/M
3300026326\|Ga0209801_1105791	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300026340\|Ga0257162_1017273	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	860	Open in IMG/M
3300026342\|Ga0209057_1162047	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	673	Open in IMG/M
3300026343\|Ga0209159_1033136	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	2732	Open in IMG/M
3300026498\|Ga0257156_1066560	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	745	Open in IMG/M
3300026523\|Ga0209808_1001424	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	12274	Open in IMG/M
3300026528\|Ga0209378_1234195	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	585	Open in IMG/M
3300026530\|Ga0209807_1007616	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	5350	Open in IMG/M
3300026538\|Ga0209056_10171370	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1628	Open in IMG/M
3300026540\|Ga0209376_1109666	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1395	Open in IMG/M
3300026548\|Ga0209161_10421726	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	586	Open in IMG/M
3300026552\|Ga0209577_10115730	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	2154	Open in IMG/M
3300027018\|Ga0208475_1001857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1997	Open in IMG/M
3300027018\|Ga0208475_1003870	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1461	Open in IMG/M
3300027122\|Ga0207538_1011834	Not Available	505	Open in IMG/M
3300027717\|Ga0209998_10028741	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1223	Open in IMG/M
3300027903\|Ga0209488_10264935	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1287	Open in IMG/M
3300028047\|Ga0209526_10073061	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2413	Open in IMG/M
3300028711\|Ga0307293_10012586	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	2392	Open in IMG/M
3300028824\|Ga0307310_10253806	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	845	Open in IMG/M
3300028828\|Ga0307312_10572474	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	747	Open in IMG/M
3300028881\|Ga0307277_10072995	All Organisms → cellular organisms → Bacteria	1426	Open in IMG/M
3300030848\|Ga0075388_10958230	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Chthoniobacter → Chthoniobacter flavus	1794	Open in IMG/M
3300030916\|Ga0075386_12177238	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	853	Open in IMG/M
3300031231\|Ga0170824_119080271	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1220	Open in IMG/M
3300031231\|Ga0170824_128395323	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	958	Open in IMG/M
3300031474\|Ga0170818_114681096	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1241	Open in IMG/M
3300031716\|Ga0310813_10206151	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1615	Open in IMG/M
3300031720\|Ga0307469_11111095	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	743	Open in IMG/M
3300031890\|Ga0306925_11314147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	718	Open in IMG/M
3300032180\|Ga0307471_101241973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	908	Open in IMG/M
3300032261\|Ga0306920_100205305	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2941	Open in IMG/M
3300032421\|Ga0310812_10178382	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	914	Open in IMG/M
3300033289\|Ga0310914_11134459	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	683	Open in IMG/M
3300033412\|Ga0310810_10046235	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5315	Open in IMG/M
3300034644\|Ga0370548_064098	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	682	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.38%
Host-Associated	Host-Associated	3.62%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.75%
Aquatic	Environmental → Aquatic	3.62%
Plants	Host-Associated → Plants	3.62%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.75%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.90%
Sediment	Environmental → Aquatic → Sediment	2.17%
Freshwater	Environmental → Aquatic → Freshwater	1.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	86.23%
Loam	Environmental → Terrestrial → Soil → Loam	5.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.17%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.45%
Sand	Environmental → Terrestrial → Soil → Sand	0.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	47.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	27.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.17%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.17%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.19%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	15.22%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	9.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.35%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.62%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.17%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.72%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006794	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009802	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_50_60	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300019875	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3s2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020010	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1s2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026340	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-A	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026498	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-A	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026548	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026791	Grasslands soil microbial communities from Kansas, USA that are Nitrogen fertilized - NN591 (SPAdes)	Environmental	Open in IMG/M
3300027018	Grasslands soil microbial communities from Kansas, USA, that are Nitrogen fertilized - NN575 (SPAdes)	Environmental	Open in IMG/M
3300027122	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A2-11 (SPAdes)	Environmental	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300030848	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OA8 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_04016090	2170459010	Grass Soil	NWESFLRPAGVSWPFFLLGAAVVAPLFFAQRALAAAESFARVPGGK
JGI10216J12902_1180521162	3300000956	Soil	VFVPAAFLLAAQRAFIKSESFLRPAGVSAPFFLVGAGFPAPPLSLAQRALAAAESLARVVGEK*
Ga0066688_101447321	3300005178	Soil	VSAPFFLAGAAFLLVVLLLAAQRAFINCESFLRPAGVSWPFFLAGVAAVVVVAPPLNLAQRALAAAASFARVAGEK*
Ga0066685_101953653	3300005180	Soil	PAGVSWPFFLAGVAARAPLSLAQRALAAAASFARVPGEK*
Ga0066388_1006775841	3300005332	Tropical Forest Soil	PAAVSPPFFTEGAFFVPAAFLLAAQRAFISSESFLRPAAVRAPLFLVGAAFIGPFSLAQRALAAAESLARVEGEK*
Ga0070675_1004922633	3300005354	Miscanthus Rhizosphere	FVPPDFLLAAQRAFISSDSFLRPAAVSAPFFLVGAGFAPPFSLAQRALAADESFARVDGEK*
Ga0070709_103517403	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	PPFFAEGAALVPAVFLLAAQRALMSSESLLRPAGVSAPFFLVTVGFVPPFSLAQRALAAAASLARVEGEK*
Ga0066689_103858691	3300005447	Soil	LAAQRAFINWESFLRPAGVSWPFFLVGAAVVAPLFLAQRALAAVESFARVVGEK*
Ga0066682_103736462	3300005450	Soil	SVPLFLAGAAFLPADFLRAAQRAFISWESFLRPAGVSWPFFFVGVVGAGPLSLAQRALAAAASFARVVGEK*
Ga0066682_108896831	3300005450	Soil	LAAQRAFINWESFLRPAGVSWPFFLAGVAARAPLSLAQRALAAAASFARVPGEK*
Ga0066697_101588884	3300005540	Soil	AAQRAFINWESFLRPAGVIWPFFFLVGAAVAVPLCLAQRALAAAESFARVPGEK*
Ga0066697_105081022	3300005540	Soil	DFLRAAQRAFISWESFLRPAGVSWPFFFAGVVGAGPLSLAQRALAAAESFARVEGEK*
Ga0066661_101148733	3300005554	Soil	LLAAQRAFINWESFLRPAGVSWPFLFLGAGVVAPLFLAQRALAAVASFARVAGEK*
Ga0066692_103966062	3300005555	Soil	LAAQRAFINWESFLRPAGVSCPFFLAEVAVVAPPLNLSQRALAAAESFARVEGEK*
Ga0066707_105136673	3300005556	Soil	VSAPFFFAGAFFVPPAFLLAAQRAFINWESFLRPAGVIWPFFFLVGAAVAVPLCLAQRALAAAESFARVPGEK*
Ga0066670_100320821	3300005560	Soil	MPFFFAGAFFAPPAFLLAAQRAFINWESFLRPAGVSWPFLFLGAGVVAPLFLAQRALAAAASFARVAGEK*
Ga0066670_101463292	3300005560	Soil	VPLFLLVADFVPPALLLAAQRAFINCDSFRRPAGVSWPFCFGDVAVGAAVVAVVEPFRLAQRAFAAAASFARVVGEK*
Ga0066699_101711751	3300005561	Soil	PFFAEGAFFVPAVFLLAAQRAFINSESFRRPAAVSAPFFLEGAGFVPPFNLAQRALAAAESFARVEGEK*
Ga0066703_102507291	3300005568	Soil	LLAAQRAFINWESFLRPAGVSWPFLFLGAGVVAPLFLAQRALAAAASFARVAGEK*
Ga0066691_101473413	3300005586	Soil	AAQRAFINWESFLRPAGVSWPFFLAGVAARAPLSLAQRALAAAASFARVPGEK*
Ga0066706_100263304	3300005598	Soil	VPPAFLLAAQRAFINWESFLRPAGVIWPFFFLVGAAVAVPLCLAQRALAAAESFARVPGEK*
Ga0066903_1008921803	3300005764	Tropical Forest Soil	LLAAQRAFINWESFLRPAGVSWPFFLAGVAVVPPLSLAQRALAAAESFARVEGEK*
Ga0066656_101314993	3300006034	Soil	FINWESFLRPAGVSWPFFLGPAVVAPLCLAQRALAAAESFARVPGEK*
Ga0066652_1001710941	3300006046	Soil	VPLFLLVADFVPPALLLAAQRAFINCDSFRRPAGVSWPFCFDDVAVGAAVVAVVEPFRLAQRALAAAASFARVVGEK*
Ga0066658_107075872	3300006794	Soil	PAVFLRAAQRAFISWESFLRPAGVSWPFFFAGVVGAGPLSLAQRALAAAASFARVVGEK*
Ga0075424_1018084951	3300006904	Populus Rhizosphere	AVSAPFFLAGADFVPPFNLAQRALAAAESLARVEGEK*
Ga0066710_1016617602	3300009012	Grasslands Soil	FLAGAAFLLVVLLLAAQRAFINCESFLRPAGVSWPFFLAGVAAVVVVAPPLNLAQRALAAAASFARVAGEK
Ga0066710_1030062431	3300009012	Grasslands Soil	LLAAQRALISSDSFLRPAGVSWPFFLAGVAVVGPLFILDQRALAAAESFARIAGEK
Ga0075418_105226603	3300009100	Populus Rhizosphere	FLRPAGVSWPLLLAGAAAVVVVVVVPRLLAQRALAAAASFALVAGEK*
Ga0105073_10722071	3300009802	Groundwater Sand	EGAAFVPAPFLLAAQRAFISSESFLRPAGVSAPFFLLGAGFVPPFNLAQRALAAAASLARVDGEK*
Ga0126384_121531552	3300010046	Tropical Forest Soil	AFINWESFLRPAGVSWPFFLAGVAARAPLSLAQRALAAAASFARVLGEK*
Ga0126382_100413461	3300010047	Tropical Forest Soil	PFFAEGAAFVAPAFLLAAQRALMSSESFLRPAAVSTPFFLVGAGFVPPFNLAQRALAAAESLARVEGEK*
Ga0134070_100263053	3300010301	Grasslands Soil	LAAQRAFINWESFLRPAGVSWPFFLAGVAARAPLSLAQRAFAAAASFARVPGEK*
Ga0134109_101942292	3300010320	Grasslands Soil	PLFLAGAAFLPTDFLRAAQRAFISWESFLRPAGVSWPFFFAGVVGAGPLSLAQRALAAAESFARVEGEK*
Ga0134064_101454992	3300010325	Grasslands Soil	AFLPADFLRAAQRAFISWESFLRPAGVSWPFFFVGVVGAGPLSLAQRALAAAASFARVVGEK*
Ga0134111_101160262	3300010329	Grasslands Soil	EGAAFFVPAVFLLAAQRALMSSESFLRPAGVSAPFFLVAVGFVPPFSLAQRALAAAASLARVEGEK*
Ga0134080_102648152	3300010333	Grasslands Soil	AGVSVPLFLAGAAFLPADFLRAAQRAFISWESLLRPAGVSWPFFFAGVAGAGPLNLAQRALAAAASFARVVGEK*
Ga0134071_100095204	3300010336	Grasslands Soil	MPVGWTDYFAAAFLLAAQRAFINWESFLRPAGVSWPFFLVGAAVVAPLFLAQRALAAVESFARVVGEK*
Ga0126377_110976042	3300010362	Tropical Forest Soil	PFFAEGAAFVPPDFLLAAQRAFISSDSFLRPAAVNAPFFLVGAGFAPPFSLAQRALAAAESLARVDGEK*
Ga0126379_113704622	3300010366	Tropical Forest Soil	RLAYLPPPAFLLAAQRAFISRESFLLPAGVSPRLFFAGAAFLPALILAQRALAAAASLARVVADIRR*
Ga0126379_120657672	3300010366	Tropical Forest Soil	AAFVPEAFLLAAHRAFINSESFLRPAAVSTPFFLLGAGFAPPFSLAQRALAAAESLARVEAEK*
Ga0134125_102498233	3300010371	Terrestrial Soil	LAAQRAFISSDSFLRPAAVSAPFFLAGAGFVPPFSLAQRALAAAESLARVEGEK*
Ga0126383_101708214	3300010398	Tropical Forest Soil	LLAAQRAFISWESFLRPAAVSCPFLFVGAAPLVLPRVLAQRALAAAESFALVAGEK*
Ga0137389_112040142	3300012096	Vadose Zone Soil	SWPFFLRGAVVVAPLFLAQRALAAAESFARVPGEK*
Ga0137383_113681651	3300012199	Vadose Zone Soil	QRAFINWESLRRPAGVSPPFFLTGADFFVPFSFAQRALAAAESLARVAGEK*
Ga0137374_107196451	3300012204	Vadose Zone Soil	VSPPFLAEGAAFVPADFLLAAQRAFINSESFLRPAAVSAPFFFAGAGFVPPFSFAQRALAAAESLARVEGEK*
Ga0137380_104633872	3300012206	Vadose Zone Soil	VSVPLFLAGAAFLPADFLRAAQRAFISWESFLRPAGVSWPFFFVGVVGAGPLSLAQRALAAAASFARVVGEK*
Ga0137376_112192071	3300012208	Vadose Zone Soil	PFFLPGALFLPAVLLLAAQRAFINRESFLRPAGVSWPFFLAGAAVGAPLSLAQRALAAAESFARVAGEK*
Ga0137379_117810311	3300012209	Vadose Zone Soil	LLRPAGVSAPFFLAGAGFVVVFCFAHRALAASESLARVVGEK*
Ga0137378_105853622	3300012210	Vadose Zone Soil	VPADFLRAAQRAFISSESFLRPAAVSAPFFLAGDGFVPPFSRAQRALAAAASFARVEGEK
Ga0137370_109448351	3300012285	Vadose Zone Soil	FFAEGATFVPPVFLLAAQRAFISSESFLRPAGVNAPFFLVGVGAGFVPPFNLAQRALAAAASFARVEGEK*
Ga0137372_100258845	3300012350	Vadose Zone Soil	ESFLRPAGVSAPFFLVGVGAGFVLPFNLAQRALAAAASLARVEGEK*
Ga0137367_105712351	3300012353	Vadose Zone Soil	PAGVSVPLFLAGAAFLPADFLRAAQRAFISWESFLRPAGVSWPFFFVGVVGAGPLSLAQRALAAAASFARVVGEK*
Ga0137366_104877542	3300012354	Vadose Zone Soil	VSPPFLAEGAAFVPADFLLAAQRAFINSESFLRPAAVSAPFFFAAAGFVPPFSFAQRALAAAESFARVEGEK*
Ga0137366_107023152	3300012354	Vadose Zone Soil	AGAAFLPADFLRAAQRAFISWESFLRPAGVSWPFFFAGVAGAGPLILAQRALAAAASFARVVGEK*
Ga0137366_112431811	3300012354	Vadose Zone Soil	AAFLPADFLRAAQRAFISWESFLRPAGVSWPFFFAGVAGAGAFSLAQRALAAAASFARVVGEK*
Ga0137384_108077243	3300012357	Vadose Zone Soil	AAQRAFISSESFLRPAGVSVPFFLAGDGFVPPFSRAQRALAAAASFARVEGEK*
Ga0137361_106498053	3300012362	Vadose Zone Soil	RIPVVLIDYFRPAVFRRAAQRALMSSESFLRPAGVSAPFFLVAVGLVPPLSLAQRALAAAASLARVEGEK*
Ga0137373_102509833	3300012532	Vadose Zone Soil	VPGPLRESGLLLAAQRAFISWESFLRPAGVSLPFLLAGAAPPVLRVLAQRALAAAESFALVEGEK*
Ga0157299_102713782	3300012899	Soil	FLLAAQRAFISSESFLRPAGVSAPFFMAGAGFLPPFNLAQRALAAAASFARVEAEK*
Ga0157301_102191961	3300012911	Soil	AFVPPDFLLAAQRAFISSDSFLRPAAVSAPFFLGGAGFVPPFSLAQRALAAAESLARVEGEK*
Ga0137396_112074241	3300012918	Vadose Zone Soil	RPAGVRPPFFAEGAAFFVPAVFLLAAQRAFMSSESFLRPAGVSAPFFLVAVGFGPPFSLAQRALAAAASLARVEGEK*
Ga0137359_100985004	3300012923	Vadose Zone Soil	VSTPLFLAGAGFLPVAFLRAAQRAFINWESFLRPAGVSWPFFFAGVTGAGPLSLAQRALAAAASFARVVGEK*
Ga0137416_108657651	3300012927	Vadose Zone Soil	EGAALAVLVPAPFLRAAQRAFISSESFLRPAGVSAPFFLVGAGFVPPFSLAQRALAAAASLARVEGEK*
Ga0137404_100507113	3300012929	Vadose Zone Soil	GVSVPFFLPGAAFLPADFLRAAQRAFISWESFLRPAGVSWPFFFAGVVGAGPLSLAQRALAAAASFARVEGEK*
Ga0137404_106376852	3300012929	Vadose Zone Soil	FFVPAVFLLAAQRALMSSESFLRPAGVSAPFFLVAVGFVPPFSLAQRALAAAASLARVEGEK*
Ga0134077_105456751	3300012972	Grasslands Soil	GVSWPFFFAGVAGAGALSLAQRALAAAASFARVVGEK*
Ga0137405_12464061	3300015053	Vadose Zone Soil	PPRRPGAAQRAFISWESFLRPAGVSWPFFFAGVVGAGPLSLAQRALAAAASFARVEGEK*
Ga0137403_101817203	3300015264	Vadose Zone Soil	AFLPADFLRAAQRAFISWESFLRPAGVSWPFFFAGVVGAGPLSLAQRALAAAASFARVEGEK*
Ga0134073_100393212	3300015356	Grasslands Soil	WDSFLRPAGVSWPFFPAGVAARAPLSLAQRAFAAAASFARVVAEK*
Ga0134073_101516231	3300015356	Grasslands Soil	GVSVPLFLLLVDFVPPALLLAAQRAFINCDSFRRPAGVSWPFCFGDVAVGAAVVAVVEPFRLAQRAFAAAASFARVVGEK*
Ga0134073_101723472	3300015356	Grasslands Soil	RPAGVSWPFLLVGAAVVAPLFLAQRALAAAASFARVAGEK*
Ga0182033_101322361	3300016319	Soil	VSVPFFFAGAFFAPPAFLLAAQRAFINWESFLRPAGVSWPFFLLGAAVVAPLRLAQRALAAAASFARVVGEK
Ga0182035_118219391	3300016341	Soil	ESFLLPAGVSVPRFLPGAAFLPAVFLRAAQRAFISWESFLRPAGVSWPFFLAGVVGAGLLSLAQRALAAAESFARVEGEK
Ga0182038_107159842	3300016445	Soil	LLAAQRAFINWESFLRPAGVSVPFFFAGVAVVPPLCLAQRALAAAESFARVPGEK
Ga0134112_100500551	3300017656	Grasslands Soil	SFLRPAGVSWPFFLVGAAVVAPLFLAQRALAAVESFARVVGEK
Ga0134112_100779251	3300017656	Grasslands Soil	LPVGVSVPFFLPGAAFLPADFLRAAQRAFISWESFLRPAGVSWPFFFVGVVGAGPLSLAQRALAAAASFARVEGEK
Ga0134112_101471121	3300017656	Grasslands Soil	VSVPFFFAGAFLAPPAFLLAAQRAFINWESFLRPAGVSWPFFLRGAAVVAPLFFAQRALAAAESFARVPGEK
Ga0184617_10242822	3300018066	Groundwater Sediment	VRPPFFAEGAAFVPPDAFVPLDLLLAAQRAFISSDSFLRPAAVSAPFFLAGAGFVPPFSLAQRALAAAESLARVEGEK
Ga0184632_100398213	3300018075	Groundwater Sediment	RPAALSPPFLAEAAAFVPPDFLLAAQRAFISSDSFLRPAAVSAPFFLVGAGFAPPFSLAQRALAADESFARVDGEK
Ga0066662_110074292	3300018468	Grasslands Soil	LAAAFLLAAHRAFISSESFLRPAGVSWPFFLVGAAVVAPLFLAQRALAAVESFARVVGEK
Ga0066669_100112284	3300018482	Grasslands Soil	AFFVPAVFLLAAQRAFISSESFRRPAAVSAPFFLAGAAFVPPFNLAQRALAAAESFARVEGEK
Ga0066669_100600034	3300018482	Grasslands Soil	MPFFFAGAFFAPPAFLLAAQRAFINWESFLRPAGVSWPFLFLGAGVVAPLFLAQRALAAAASFARVAGEK
Ga0173482_105175851	3300019361	Soil	RAAQRAFISWESFLRPAGVSWPFFFAGAVGAGPLVVGAGPLSLAQRALAAAASFARVAGE
Ga0173479_100439211	3300019362	Soil	RPAGVSAPFLLAGAGFLPPFNLAQRALAAAASFARVEAEK
Ga0193701_10087913	3300019875	Soil	FINCESLFRPAAVSPPFFAEGAAFVPPDFLLAAQRAFISSESFLRPAAVSAPFFLAGAGFVPPFSFAQRALAAAESFARVEGEK
Ga0193713_11884931	3300019882	Soil	VPAVGLLPPDFLLAAQRAFMSRESFRRPAGVSCPFFFAGAGEVPPLSLAQRAFAAAASFARVDGEK
Ga0193725_10536451	3300019883	Soil	VSPAFLLAAQRAFINWESFLRPAGVSWPFFLLGAAVVAPLFFAQRALAAAESFARVEGEK
Ga0193727_10065551	3300019886	Soil	AAQRAFINRESFLRPAGVSWPFFLAGVAVVGPPLILDQRALAAAESFARVAGEK
Ga0193729_10126124	3300019887	Soil	LRPAAVSPPFFAEGAVFVPADFLLAAQRAFISSESFLRPAAVSAPFFLAGAGFVPPFSFAQRALAAAESFARVEGEK
Ga0193735_10462442	3300020006	Soil	PAALLLAAQRAFINCDSFLRPAGVSWPFFLAEVAVGAPPLSLAQRALAAAASFARVEGEK
Ga0193735_10725981	3300020006	Soil	FAEGAAFVPPDFLLAAQRAFISSDSFLRPAAVSAPFFLAGAGFVPPFSLAQRALAAAESLARVEGEK
Ga0193749_10178841	3300020010	Soil	SSDSFLRPAAVSAPFFLAGAGFVPPFSFAQRALAAAESFARVEGEK
Ga0210381_101416422	3300021078	Groundwater Sediment	SHERDNLTRPGPGLAAFLLAAQRAFINWESLLRPAGVSPPFFLTKAGFFVPFSFAQRALAAAESLARVAGEK
Ga0210382_102794691	3300021080	Groundwater Sediment	GVSPPFFAEGAAFVPADFLRAAQRAFISSESFLRPAAVSAPFFLAGDGFVPPFSLAQRALAAAASFARVEGEK
Ga0193719_101182291	3300021344	Soil	VPFFLALAVFVPPAFLLAAQRAFINWESFLRPAGVSWPFFLAGVAARAPLSLAQRAFAAAASFARVVAEK
Ga0222623_102904281	3300022694	Groundwater Sediment	EPAAFVPPDFLLAAQRAFISSDSFLRPAAVSAPFFLVGAGFAPPFSLAQRALAADESFARVDGEK
Ga0207646_110934761	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VPFFFAGAFFAPPAFLLAAQRAFINWESFLRPAGVSWPFLFVGAAVFAPLSLAQRALAAAASFARVPGEK
Ga0207659_103919492	3300025926	Miscanthus Rhizosphere	PPFFAEPAAFVPPDFLLAAQRAFISSDSFLRPAAVSAPFFLVGAGFAPPFSLAQRALAADESFARVDGEK
Ga0209154_10557613	3300026317	Soil	VFVPPAFLRAAQRAFINWESFLRPAGVSWPFFPAGVAARAPLSLAQRAFAAAASFARVVAEK
Ga0209470_11437281	3300026324	Soil	VPFFLPGAAFLPADFLRAAQRAFISWESFLRPAGVSWPFFFAGVVGAGPLSLAQRALAAAASFARVEGEK
Ga0209801_11057912	3300026326	Soil	AFINWESFLRPAGVSCPFFLAEVAVVAPPLNLSQRALAAAESFARVEGEK
Ga0257162_10172731	3300026340	Soil	AGVRPPFFAEGAAFFVPAVFLLAAQRAFMSSESFLRPAGVSAPFFLVAVGFGPPFSLAQRALAAAASLARVEGEK
Ga0209057_11620471	3300026342	Soil	LRPAAVSAPFFFAGAFFVPPAFLLAAQRAFINWESFLRPAGVIWPFFFLVGAAVAVPLCLAQRALAAAESFARVPGEK
Ga0209159_10331361	3300026343	Soil	GVSVPLFLAGAAFLPADFLRAAQRAFISWESFLRPAGVSWPFFFVGVVGAGPLSLAQRALAAAASFARVVGEK
Ga0257156_10665601	3300026498	Soil	LPVAFLRAAQRAFINWESFLRPAGVSWPFFFAGVAGAGPLSLAQRALAAAASFARVVGEK
Ga0209808_100142410	3300026523	Soil	PVFLLAAQRALMSSESFLRPAGVSAPFFLVAVGLVPPLSLAQRALAAAASLARVEGEK
Ga0209378_12341952	3300026528	Soil	GVIWPFFFLVGAAVAVPLCLAQRALAAAESFARVPGEK
Ga0209807_10076166	3300026530	Soil	VPPAFLLAAQRAFINWESFLRPAGVIWPFFFLVGAAVAVPLCLAQRALAAAESFARVPGE
Ga0209056_101713703	3300026538	Soil	VSVPLFLAGAAFLPADFLRAAQRAFISWESFLRPAGVSWPFLVAVVVGAGPLSLAQRALAAAASFARVAGEK
Ga0209376_11096663	3300026540	Soil	VSVPLFLAGAAFLPADFLRAAQRAFISWESFLRPAGVSWPFFFVGVVGAGPLSLAQRALAAAASFARVVGEK
Ga0209161_104217262	3300026548	Soil	VSVPFFFAGAFFAPPAFLLAAQRAFINWESFLRPAGVSWPFLFLGAGVVAPLFLAQRALAAAASFARVAGEK
Ga0209577_101157303	3300026552	Soil	RAFISSESFLRPAAVSAPFFLAGAGFVPPFSLAQRALAAAASLARVEGEK
Ga0208072_1009413	3300026791	Soil	AGVRAPFFLAGASFVPPFNLAQRALAAAASLARVDGEK
Ga0208475_10018573	3300027018	Soil	PAFLLAAQRAFINSESFLRPAGESAPFFLPGAGLAPPFSLAQRALAAAESLARVEGEK
Ga0208475_10038702	3300027018	Soil	SFLRPAGVSVPFFLAGAVFLPAALLLAAQRAFINCDSFLRPAGVSWPFFLAEVTVVPPPLSLAQRALAAAASFARVEGEK
Ga0207538_10118341	3300027122	Soil	RDFLLAAQRAFISSDSFLRPAAVSAPFFLGGAGFVPPFSLAQRALAAAESLARVEGEK
Ga0209998_100287412	3300027717	Arabidopsis Thaliana Rhizosphere	FLLAAQRAFISSDSFLRPAAVSAPFFLGGAGFVPPFSLAQRALAAAESLARVEGEK
Ga0209488_102649354	3300027903	Vadose Zone Soil	INWESFLRPAAVSWPFLLRGAVVVAPLFLAQRALAAAESFARVPGEK
Ga0209526_100730612	3300028047	Forest Soil	LPVTFLRAAQRAFINWESFLRPAGVSWPLFFAGVAGAGPLSLAQRALAAAASFARVVGEK
Ga0307293_100125863	3300028711	Soil	VSVPFCRAGAVFLPAALLLAAQRAFINCDSFLRPAGVSWPFFLAEVAVGAPPLSLAQRALAAAASFARVEGEK
Ga0307310_102538061	3300028824	Soil	DFLRAAQRAFISSESFLRPAAVSAPFFLAGDGFVPPFSLAQRALAAAASFARVEGEK
Ga0307312_105724741	3300028828	Soil	RAFINWESLLRPAGVSAPFFLARTVFGVLFSLDQRALAAAESLARVAGEK
Ga0307277_100729951	3300028881	Soil	ESFLRPAGVSWPFFLAGVAAVVVVAPPLNLAQRALAAAASFARVAGEK
Ga0075388_109582303	3300030848	Soil	LVPAPFLLAAQRALISSESFLRPAGVSAPFFLVGAGFVPPFNLAQRALAAAASLARVEGE
Ga0075386_121772382	3300030916	Soil	SAPFFLAGAAFLPADFLRAAQRAFISWESFLRPAGVSWPFFFAGVVGAGPLSLAQRALAAAASFARVEGEK
Ga0170824_1190802714	3300031231	Forest Soil	RPAGVSWPFFLAGAAVVAPLFLAQRALAAAESFARVPAEK
Ga0170824_1283953232	3300031231	Forest Soil	LFLAGAAFLPADFLRAAQRAFISWESFLRPAGVSWPFFFAGVVGAGPLSLAQRALAAAASFARVEGEK
Ga0170818_1146810964	3300031474	Forest Soil	INWERNLRPDGVSWPFFLLGAAVVAPLFFDQRALAAAESFARVPAEK
Ga0310813_102061513	3300031716	Soil	AAVRPPFFAEAVAFVPPDFLLAAQRAFISSDSFLRPAAVSAPFFLVGAGFAPPFSLAQRALAADESFARVDGEK
Ga0307469_111110952	3300031720	Hardwood Forest Soil	SSESFLLPAAVSVPLFLAGAAFLPADFLRAAQRAFISWESFLRPAGVSWPFFFAGVVGAGPLSLAQRALAAAASFARVAGEK
Ga0306925_113141471	3300031890	Soil	LRPAAVSVPYFFAGAFFAPPAFLLAAQRAFINWESFLRPAGVSWPFFLLGAAVVAPLRLAQRALAAAASFARVAGEK
Ga0307471_1012419731	3300032180	Hardwood Forest Soil	DFLRAAQRAFISWESFLRPAGVSWPFFFAGVVGAGPLSLAQRALAAAASFARVAGEK
Ga0306920_1002053052	3300032261	Soil	VSVPFFFAGAFFAPPAFLLAAQRAFINWESFLRPAGVSWPFFLLGAAVVAPLRLAQRALAAAASFARVAGEK
Ga0310812_101783822	3300032421	Soil	VSPPFFAEGAAFVPAPFLLAAQRAFISSESFLRPAGVSAPFFLAGAGFVPRFNLAQRALAAAASFARVEAEK
Ga0310914_111344591	3300033289	Soil	LRPAGVSWPFFLAGVVGAGLLSLAQRALAAAESFARVEGEK
Ga0310810_100462351	3300033412	Soil	VSAPFFRGGAAFLPVVFLLAAQRAFINCESFLRPAGVSAPFFRAGVAAVVAVDPPLNLAQRALAAAASFARVAGEK
Ga0370548_064098_373_561	3300034644	Soil	MVVVFLLAAQRAFINCESFLRPAGVSAPFFVAGVAAVVVPPLNLAQRALAAAASFARVAGEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055605

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences