NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F055740

Metagenome / Metatranscriptome Family F055740

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F055740
Family Type Metagenome / Metatranscriptome
Number of Sequences 138
Average Sequence Length 43 residues
Representative Sequence MIKINLLESSKGKGKRGGGGGPSMPSMEMGDMGSPKLKVL
Number of Associated Samples 124
Number of Associated Scaffolds 138

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 100.00 %
% of genes near scaffold ends (potentially truncated) 99.28 %
% of genes from short scaffolds (< 2000 bps) 93.48 %
Associated GOLD sequencing projects 120
AlphaFold2 3D model prediction Yes
3D model pTM-score0.15

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (100.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(15.217 % of family members)
Environment Ontology (ENVO) Unclassified
(24.638 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(52.899 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.15
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 138 Family Scaffolds
PF11104PilM_2 92.03
PF12728HTH_17 5.80
PF13181TPR_8 0.72
PF07681DoxX 0.72
PF00347Ribosomal_L6 0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 138 Family Scaffolds
COG0097Ribosomal protein L6P/L9ETranslation, ribosomal structure and biogenesis [J] 0.72
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 0.72
COG4270Uncharacterized membrane proteinFunction unknown [S] 0.72

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms100.00 %
UnclassifiedrootN/A0.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001087|JGI12677J13195_1011182All Organisms → cellular organisms → Bacteria627Open in IMG/M
3300001593|JGI12635J15846_10097543All Organisms → cellular organisms → Bacteria2115Open in IMG/M
3300001686|C688J18823_10123945All Organisms → cellular organisms → Bacteria1790Open in IMG/M
3300001867|JGI12627J18819_10092973All Organisms → cellular organisms → Bacteria1248Open in IMG/M
3300002245|JGIcombinedJ26739_100259798All Organisms → cellular organisms → Bacteria1624Open in IMG/M
3300003573|Ga0007412J51696_1152402All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300004268|Ga0066398_10124999All Organisms → cellular organisms → Bacteria622Open in IMG/M
3300004474|Ga0068968_1446113All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300004619|Ga0068953_1462333All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300005526|Ga0073909_10066687All Organisms → cellular organisms → Bacteria1348Open in IMG/M
3300005535|Ga0070684_100170955All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1974Open in IMG/M
3300005541|Ga0070733_10810546All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300005542|Ga0070732_10925763All Organisms → cellular organisms → Bacteria533Open in IMG/M
3300005563|Ga0068855_100827265All Organisms → cellular organisms → Bacteria982Open in IMG/M
3300005591|Ga0070761_10500044All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300005944|Ga0066788_10016234All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1619Open in IMG/M
3300006162|Ga0075030_100932247All Organisms → cellular organisms → Bacteria684Open in IMG/M
3300006426|Ga0075037_1696257All Organisms → cellular organisms → Bacteria604Open in IMG/M
3300006893|Ga0073928_10758539All Organisms → cellular organisms → Bacteria673Open in IMG/M
3300006914|Ga0075436_101230096All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300007265|Ga0099794_10507735All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300009521|Ga0116222_1500381All Organisms → cellular organisms → Bacteria532Open in IMG/M
3300009638|Ga0116113_1162639All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300010358|Ga0126370_10333687All Organisms → cellular organisms → Bacteria1218Open in IMG/M
3300010359|Ga0126376_11437433All Organisms → cellular organisms → Bacteria716Open in IMG/M
3300010361|Ga0126378_10022700All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5461Open in IMG/M
3300010362|Ga0126377_13550475All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300010379|Ga0136449_104001023All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300010379|Ga0136449_104427895All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300011077|Ga0138572_1149734All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300011085|Ga0138581_1042969All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300012350|Ga0137372_10707234All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300012509|Ga0157334_1010602All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300012918|Ga0137396_10806819All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300012944|Ga0137410_11652908All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300015241|Ga0137418_10091116All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae2754Open in IMG/M
3300015262|Ga0182007_10073985All Organisms → cellular organisms → Bacteria1116Open in IMG/M
3300015265|Ga0182005_1101661All Organisms → cellular organisms → Bacteria806Open in IMG/M
3300016387|Ga0182040_10666553All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300017933|Ga0187801_10433480All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300017993|Ga0187823_10192125All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300017995|Ga0187816_10022623All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2487Open in IMG/M
3300018035|Ga0187875_10677906All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300018040|Ga0187862_10326348All Organisms → cellular organisms → Bacteria961Open in IMG/M
3300018046|Ga0187851_10528065All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300018060|Ga0187765_11153918All Organisms → cellular organisms → Bacteria541Open in IMG/M
3300019260|Ga0181506_1026792All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300019284|Ga0187797_1371976All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300019786|Ga0182025_1033405All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300020582|Ga0210395_11047967All Organisms → cellular organisms → Bacteria603Open in IMG/M
3300020582|Ga0210395_11136675All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300021088|Ga0210404_10299634All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300021170|Ga0210400_11342688All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300021178|Ga0210408_10864567All Organisms → cellular organisms → Bacteria705Open in IMG/M
3300021178|Ga0210408_11298002All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300021180|Ga0210396_10511999All Organisms → cellular organisms → Bacteria1049Open in IMG/M
3300021180|Ga0210396_11331104All Organisms → cellular organisms → Bacteria596Open in IMG/M
3300021181|Ga0210388_11507257All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300021401|Ga0210393_10185573All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1678Open in IMG/M
3300021407|Ga0210383_10094266All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2516Open in IMG/M
3300021407|Ga0210383_11278204All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300021474|Ga0210390_11309684All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300021475|Ga0210392_10141243All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1635Open in IMG/M
3300021477|Ga0210398_10544332All Organisms → cellular organisms → Bacteria944Open in IMG/M
3300021559|Ga0210409_10787914All Organisms → cellular organisms → Bacteria823Open in IMG/M
3300022508|Ga0222728_1005175All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1525Open in IMG/M
3300022522|Ga0242659_1005897All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1572Open in IMG/M
3300022726|Ga0242654_10200685All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300022728|Ga0224566_111739All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300025463|Ga0208193_1098191All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300025473|Ga0208190_1085672All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300025812|Ga0208457_1045586All Organisms → cellular organisms → Bacteria938Open in IMG/M
3300026078|Ga0207702_11263219All Organisms → cellular organisms → Bacteria733Open in IMG/M
3300026217|Ga0209871_1035126All Organisms → cellular organisms → Bacteria943Open in IMG/M
3300026294|Ga0209839_10104520All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300026550|Ga0209474_10123190All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1716Open in IMG/M
3300026557|Ga0179587_10654536All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300026984|Ga0208732_1014569All Organisms → cellular organisms → Bacteria677Open in IMG/M
3300027605|Ga0209329_1152527All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300027609|Ga0209221_1126487All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300027684|Ga0209626_1112552All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300027737|Ga0209038_10148646All Organisms → cellular organisms → Bacteria710Open in IMG/M
3300027745|Ga0209908_10025833All Organisms → cellular organisms → Bacteria1155Open in IMG/M
3300027767|Ga0209655_10142853All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300027842|Ga0209580_10536751All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300027905|Ga0209415_11070049All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300027908|Ga0209006_10368352All Organisms → cellular organisms → Bacteria1215Open in IMG/M
3300027911|Ga0209698_11043471All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300028020|Ga0265351_1023684All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300028047|Ga0209526_10649959All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300028560|Ga0302144_10132512All Organisms → cellular organisms → Bacteria805Open in IMG/M
3300028747|Ga0302219_10123537All Organisms → cellular organisms → Bacteria985Open in IMG/M
3300028747|Ga0302219_10432879All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300028800|Ga0265338_10037680All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4596Open in IMG/M
3300028873|Ga0302197_10381306All Organisms → cellular organisms → Bacteria626Open in IMG/M
3300029907|Ga0311329_10417012All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300029955|Ga0311342_10022007All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae8224Open in IMG/M
3300030399|Ga0311353_10523077All Organisms → cellular organisms → Bacteria1048Open in IMG/M
3300030503|Ga0311370_10155597All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3142Open in IMG/M
3300030520|Ga0311372_10922760All Organisms → cellular organisms → Bacteria1168Open in IMG/M
3300030597|Ga0210286_1274013All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300030707|Ga0310038_10457989All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300030740|Ga0265460_11413795All Organisms → cellular organisms → Bacteria686Open in IMG/M
3300030746|Ga0302312_10089690All Organisms → cellular organisms → Bacteria1276Open in IMG/M
3300030815|Ga0265746_1007847All Organisms → cellular organisms → Bacteria1145Open in IMG/M
3300030815|Ga0265746_1033033All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300030836|Ga0265767_108007All Organisms → cellular organisms → Bacteria680Open in IMG/M
3300030874|Ga0265742_1002593All Organisms → cellular organisms → Bacteria1116Open in IMG/M
3300030885|Ga0265743_114362All Organisms → cellular organisms → Bacteria578Open in IMG/M
3300031231|Ga0170824_114558072All Organisms → cellular organisms → Bacteria601Open in IMG/M
3300031236|Ga0302324_101245845All Organisms → cellular organisms → Bacteria987Open in IMG/M
3300031259|Ga0302187_10322206All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300031525|Ga0302326_10444751All Organisms → cellular organisms → Bacteria → Acidobacteria1989Open in IMG/M
3300031715|Ga0307476_10723054All Organisms → cellular organisms → Bacteria737Open in IMG/M
3300031715|Ga0307476_10906933All Organisms → cellular organisms → Bacteria650Open in IMG/M
3300031753|Ga0307477_10475741All Organisms → cellular organisms → Bacteria851Open in IMG/M
3300031754|Ga0307475_10168461All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1745Open in IMG/M
3300031823|Ga0307478_10160280All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1791Open in IMG/M
3300031823|Ga0307478_10736035All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300031823|Ga0307478_11032506All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300031823|Ga0307478_11046216All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300031823|Ga0307478_11298178All Organisms → cellular organisms → Bacteria605Open in IMG/M
3300032160|Ga0311301_12097577All Organisms → cellular organisms → Bacteria654Open in IMG/M
3300032160|Ga0311301_12708506All Organisms → cellular organisms → Bacteria545Open in IMG/M
3300032174|Ga0307470_11654178All Organisms → cellular organisms → Bacteria537Open in IMG/M
3300032205|Ga0307472_100283771All Organisms → cellular organisms → Bacteria1320Open in IMG/M
3300032261|Ga0306920_100806810All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1377Open in IMG/M
3300032828|Ga0335080_11446807All Organisms → cellular organisms → Bacteria682Open in IMG/M
3300032828|Ga0335080_11517716All Organisms → cellular organisms → Bacteria662Open in IMG/M
3300032892|Ga0335081_11429846All Organisms → cellular organisms → Bacteria771Open in IMG/M
3300032893|Ga0335069_11623290All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300032898|Ga0335072_10777051All Organisms → cellular organisms → Bacteria921Open in IMG/M
3300032955|Ga0335076_10931502All Organisms → cellular organisms → Bacteria750Open in IMG/M
3300033134|Ga0335073_10211043All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2400Open in IMG/M
3300033158|Ga0335077_10316492All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1702Open in IMG/M
3300033486|Ga0316624_11201471All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300033829|Ga0334854_019335All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1647Open in IMG/M
3300034091|Ga0326724_0621215All Organisms → cellular organisms → Bacteria535Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil15.22%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.25%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil7.97%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil7.97%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil6.52%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa5.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil5.07%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.35%
BogEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Bog3.62%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.90%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland2.90%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.90%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil2.90%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment2.17%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.45%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.45%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil1.45%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil1.45%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.45%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.45%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.72%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.72%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.72%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.72%
Thawing PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Thawing Permafrost0.72%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.72%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.72%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.72%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.72%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.72%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.72%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.72%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.72%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.72%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.72%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.72%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001087Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300001867Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300003573Grassland soil microbial communities from Hopland, California, USA - Sample H1_Bulk_28 (Metagenome Metatranscriptome, Counting Only)Host-AssociatedOpen in IMG/M
3300004268Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBioEnvironmentalOpen in IMG/M
3300004474Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 60 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004619Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 45 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005541Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005591Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1EnvironmentalOpen in IMG/M
3300005944Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 2 DNA2013-048EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006426Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_054 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006893Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaGEnvironmentalOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009638Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011077Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011085Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 71 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012509Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6EnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015262Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaGHost-AssociatedOpen in IMG/M
3300015265Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaGHost-AssociatedOpen in IMG/M
3300016387Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017993Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_3EnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018035Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10EnvironmentalOpen in IMG/M
3300018040Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018060Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MGEnvironmentalOpen in IMG/M
3300019260Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019284Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019786Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)EnvironmentalOpen in IMG/M
3300020582Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-OEnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021475Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-OEnvironmentalOpen in IMG/M
3300021477Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-OEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022508Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022522Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022728Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU2EnvironmentalOpen in IMG/M
3300025463Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025473Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)EnvironmentalOpen in IMG/M
3300025812Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_150 (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026217Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045 (SPAdes)EnvironmentalOpen in IMG/M
3300026294Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050 (SPAdes)EnvironmentalOpen in IMG/M
3300026550Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026984Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF048 (SPAdes)EnvironmentalOpen in IMG/M
3300027605Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027609Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027684Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027737Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027745Thawing permafrost microbial communities from the Arctic, studying carbon transformations - Permafrost 812P2MEnvironmentalOpen in IMG/M
3300027767Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)EnvironmentalOpen in IMG/M
3300027842Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028020Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028560Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E2_2EnvironmentalOpen in IMG/M
3300028747Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300028873Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1EnvironmentalOpen in IMG/M
3300029907I_Bog_N1 coassemblyEnvironmentalOpen in IMG/M
3300029955II_Bog_E2 coassemblyEnvironmentalOpen in IMG/M
3300030399II_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300030503III_Palsa_E3 coassemblyEnvironmentalOpen in IMG/M
3300030520III_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030597Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO747-VDE046SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030740Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assemblyEnvironmentalOpen in IMG/M
3300030746Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_1EnvironmentalOpen in IMG/M
3300030815Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030836Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZU4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030874Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030885Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSI5 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031259Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_3EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033134Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033486Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_AEnvironmentalOpen in IMG/M
3300033829Peat soil microbial communities from Stordalen Mire, Sweden - 715 P2 1-5EnvironmentalOpen in IMG/M
3300034091Peat soil microbial communities from McLean, Ithaca, NY, United States - MB00NEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12677J13195_101118223300001087Forest SoilMIKINLLESSKGKNKRGGSNAPTMPSMEMGDLGSPKLKVLVVVLLAG
JGI12635J15846_1009754343300001593Forest SoilMIKINLLETTKGKGKRGGGSSGPTMPTMEVGDLGSPALKVVIVLVLAGV
C688J18823_1012394543300001686SoilMIKINLLENSKGKGKRGGSAAPSMPTMEMGDMGSPKLKVLAIVVIV
JGI12627J18819_1009297313300001867Forest SoilMIKINLLETAKGKGKRAGSGPSMPAIEMGDMGSPKLKI
JGIcombinedJ26739_10025979813300002245Forest SoilMIKINLLENSKGKNKRGGSSGPSMPTMEMGDMGSPKLKIL
Ga0007412J51696_115240223300003573Avena Fatua RhizosphereMIKINLLETNKGKGKRGSGGGPSMPTMEMGDVGSPKLKVL
Ga0066398_1012499913300004268Tropical Forest SoilMIKINLLETAKGKGKRGGSSPVMPTMEMGDMGSPKLKILVM
Ga0068968_144611313300004474Peatlands SoilMIKINLLENSKGKNKRGGGGPSMPSMEMGDMGSPKLKVLAVLVIFGLGN
Ga0068953_146233323300004619Peatlands SoilMIKINLLETAKGKGKRGGGGPSMPSMEMGDMGSPKLKVLVV
Ga0073909_1006668733300005526Surface SoilMIKINLLESNKGKGKRGSSGPSMPAMEMGDMGSPTLKVLVILVVAGLLNLGY
Ga0070684_10017095533300005535Corn RhizosphereMIKINLLETSKGKGKRASAAPSMPSIEMGDMGSPKLKILAMVVIVGLGNLG
Ga0070733_1081054623300005541Surface SoilMIKINLLESSKQKNKRGGSSAPAMPSMEMGDMGSPKLKVLV
Ga0070732_1092576323300005542Surface SoilMIKINLLESSKGKGKRGGGGGPSMPSMEMGDMGSPKLKVL
Ga0068855_10082726513300005563Corn RhizosphereMIKINLLETSKGKGKRASAAPSMPSIEMGDMGSPKLKILAMVVIVGLGN
Ga0070761_1050004413300005591SoilMIKINLLENSKGKNKRGGGGGASMPTMDMGDMGSP
Ga0066788_1001623413300005944SoilMIKINLLENSKGKSKRGGGGGPSMPSMELGDMGSPKLKIL
Ga0075030_10093224723300006162WatershedsMIKINLLESSKGKGKRGGSGPSMPTMEMGDMGSPKLKILAIM
Ga0075037_169625723300006426Permafrost SoilMIRINLLENSKGKNRRSGGGPSMPSIDMGSMGSPKLKVL
Ga0073928_1075853913300006893Iron-Sulfur Acid SpringMIRINLLENSKGKNKRAGGGGPAVPTMEMGDLGSPKLKV
Ga0075436_10123009613300006914Populus RhizosphereMIKINLLETGKGKRASSAGPSMPTMEMGDMGSPKLKILVVMV
Ga0099794_1050773513300007265Vadose Zone SoilMIRINLLESAKGKNKRAGGSSSVAMPSMEMGDMGSPKLKVL
Ga0116222_150038113300009521Peatlands SoilMIKINLLESARGKKKSGSSVPTMPSMEMGDMGSPKLKVLVVIILAG
Ga0116113_116263913300009638PeatlandMIKINLLESARGKKKGSGGSPAMPTMEMGDMGSPKLKVLVVL
Ga0126370_1033368713300010358Tropical Forest SoilMIKINLLETAKGKGKRASAGPSMPTMEMGDMGSPKLKILVIVVLVG
Ga0126376_1143743323300010359Tropical Forest SoilMIKINLLETNKGKGKRGSGGGPSLPSMEMGDMGSPKLKVLVVLVVV
Ga0126378_1002270063300010361Tropical Forest SoilMIKINLLETAKGKGKRAGSSPSMPAIEMGDMGSPKLKILVIVVIVGLA
Ga0126377_1355047523300010362Tropical Forest SoilMIKINLLETAKGKGKRGGSSPAMPTMEMGDMGSPKLKILVMVV
Ga0136449_10400102313300010379Peatlands SoilMIKINLLENSKGKSKRGGGGPSMPTMEMGDMGSPKLKI
Ga0136449_10442789513300010379Peatlands SoilMIKINLLENSKGKKRGGSGPSMPTMEMGDMGSPKLKILAVLVIAGLFNLG
Ga0138572_114973423300011077Peatlands SoilMIKINLLETSKGKRSGGGPSMPTMEMGDMGSPKLKVLAVLVIAGLFNLG
Ga0138581_104296913300011085Peatlands SoilMIKINLLENFKGKNKRGGGGPSMPSMEMGDMGSPKLKVLAVLV
Ga0137372_1070723413300012350Vadose Zone SoilMIKINLLENSKGKNRRGSSGPSMPTMEMGDMGSPKRKMLAVLVVAG
Ga0157334_101060223300012509SoilMIKINLLESNKGKGKRGGSGPSMPAMEMGDMGSPTLKVLVILVIAGLLNL
Ga0137396_1080681923300012918Vadose Zone SoilMIRINLLETAKGKNKRAGVPSMPSIELGDMGSPKLKVLV
Ga0137410_1165290823300012944Vadose Zone SoilMIRINLLESAKGKNKRAGGSSSVAMPSMEMGDMGSPKL
Ga0137418_1009111613300015241Vadose Zone SoilMIRINLLENSKGKNKRAGGSSGPVMPAMDMGDMGSPKLKVLVVLLVAGV
Ga0182007_1007398523300015262RhizosphereMIKINLLETSKGKGKRASAAPSMPSIEMGDMGSPKL
Ga0182005_110166113300015265RhizosphereMIKINLLENSKGKGKRGGSAAPSMPTMEMGDMGSPKLK
Ga0182040_1066655313300016387SoilMIKINLLETAKGKGKRGGSTPSMPTMEMGDMGSPKLKIL
Ga0187801_1043348013300017933Freshwater SedimentMIKINLLETAKGKGKRGGGGGPSMPTMEMGDMGSPKLKVLVIVVI
Ga0187823_1019212513300017993Freshwater SedimentMIKINLLENSKGKGKRATSAGPSMPSIEMGGMGSPKLKVLVVVVLAGLINL
Ga0187816_1002262343300017995Freshwater SedimentMIKINLLETAKGKGKRGGGGASLPTMEMGDMGSPKLKVLVVLVIVGLFN
Ga0187875_1067790623300018035PeatlandMIKINLLETSKGKRSGGGPSMPSMEMGDMGSPKLKVL
Ga0187862_1032634823300018040PeatlandMIKINLLESSKGKNKRGGSSGPTMPTMEMGDMGSP
Ga0187851_1052806513300018046PeatlandMIKINLLENAKGKKRGGGSPAMPTMEMGDMGSPKLKVL
Ga0187765_1115391813300018060Tropical PeatlandMIKINLLETAKGKGKRGGSSPAMPSIEMGDMGSPQLKVL
Ga0181506_102679213300019260PeatlandMIRINLLENSKGKSKRAGGSSGPTMPSMEFGDMGSPKLKVLVVLIV
Ga0187797_137197623300019284PeatlandMIRINLLETAKGKGKRGGSGPSMPSMEMGDMGSPKLKVLVVMVLVGLFN
Ga0182025_103340513300019786PermafrostMIKINLLENAKGKNKRGGGGGSSMPTMEMGDMGSPKLKKVLAVL
Ga0210395_1104796713300020582SoilMIKINLLENSKGKSKRGGGGPSMPTMEMGDMGSPKLKILGYW
Ga0210395_1113667513300020582SoilMIRINLLETTKGKGKRGSSGPAMPAMEMGDMGSPKLKVLVVILIAGA
Ga0210404_1029963423300021088SoilMIRINLLEAPKPKGKRSSMPSMPTMEVGDVGSPRLKVLL
Ga0210400_1134268813300021170SoilMIKINLLENSKGKGKRGGGGGPSMPTMEMGDMGSPKLKVLAVLVIFGL
Ga0210408_1086456713300021178SoilMIKINLLETAKGKNKRGSGGGPSMPSMDMGDMGSPKLKVLVIRVV
Ga0210408_1129800223300021178SoilMIKINLLETAKGKGKRGGGGPSMPSMEMGDMGSPKLKVLV
Ga0210396_1051199913300021180SoilMIKINLLENSKGKNKRGAGGGGPVMPTMEMGDMGSPKLKVLVIILLAGAL
Ga0210396_1133110413300021180SoilMIRINLLETSKGKGKRGSSGPTMPAMEMGDMGSPKLKVLVVILIAG
Ga0210388_1150725713300021181SoilMIKINLLENSKGKNKRGGGGGSGPVMPTMEMGDMGSPKLKVLV
Ga0210393_1018557313300021401SoilMIKINLLESARGKKKGGGSSPAMPSMEMGDMGSPKLK
Ga0210383_1009426613300021407SoilMIKINLVENSKGKGKRGGSSPVMPTMEMGDMGSPKLKILVIMVIVGLG
Ga0210383_1127820423300021407SoilMIKINLLENSKGKSKRGGSSGPSMPTMEMGDMGSPKLKILAVLVVVGLFNL
Ga0210390_1130968423300021474SoilMIKINLLENSKGKSKRGGGGPSMPTMEMGDMGSPKLKIL
Ga0210392_1014124333300021475SoilMIKINLLENAKGKNKRGGGGGPAMPSMDMGDMGSPKLKVLAVLVIAGLF
Ga0210398_1054433213300021477SoilMIKINLLENSKGKSKRGGSSGPSMPTMEMGDMGSPKLKILAVLVV
Ga0210409_1078791413300021559SoilMIKINLLETAKGKGKRGGGGPSMPSMEMGDMGSPKLKVLVVVVLAGLINLG
Ga0222728_100517533300022508SoilMIRINLLENSKGKSKRAGGSSGPTMPAMELGDMGSPKLKVLV
Ga0242659_100589713300022522SoilMIKINLLESARGKKKGGGSSPAMPSMEMGDMGSPKLKIL
Ga0242654_1020068523300022726SoilMIKINLLENSKGKSKRGGSSGPSMPTMEMGDMGSPKLK
Ga0224566_11173913300022728Plant LitterMIKINLLESSKGKNKRAGGGGPSLPAMEMGDMGSP
Ga0208193_109819123300025463PeatlandMIKINLLETSKGKGKRGGGGSSGPAMPTMEVGDLGSPM
Ga0208190_108567223300025473PeatlandMIKINLLENAKGKKRGGGSPAMPTMEMGDMGSPKLK
Ga0208457_104558613300025812PeatlandMIKINLLESSKGKNKRGGSSGPTMPTMEMGDMGSPKLKVLVVLLLVVVSLLV
Ga0207702_1126321913300026078Corn RhizosphereMIKINLLENSKGKGKRGGSAAPSMPTMEMGDMGSPKLKILA
Ga0209871_103512613300026217Permafrost SoilMIKINLLENAKGKNKRGGGGGPAMPSMDMGDMGSPKLKVLAVLVIAGLFNL
Ga0209839_1010452023300026294SoilMIKINLLENSKGKSKRGGGGGPSMPTMEMGDMGSPKLKVLA
Ga0209474_1012319033300026550SoilMIKINLLETSKGKGKRASAAPSMPSIEMGDMGSPKLKILAMVV
Ga0179587_1065453623300026557Vadose Zone SoilMIKINLLENSKGKNKRGGGGPSMPSMDMGDMGSPKLKV
Ga0208732_101456923300026984Forest SoilMIKINLLENSKGKSKRGGGGPSMPTMEMGDMGSPKLK
Ga0209329_115252713300027605Forest SoilMIKINLLESSKGKNKRGGSSAPTMPSMEMGDMGSPKLKVLVVLLL
Ga0209221_112648723300027609Forest SoilMIKINLLETTKGKGKRGGGSSGPTMPTMEVGDLGSPALKVVIVLVLAG
Ga0209626_111255213300027684Forest SoilMIRINLLETSKGKGKRGSSGPTMPAMEMGDMGSPKLKILAVLVVAGLFNL
Ga0209038_1014864623300027737Bog Forest SoilMIRINLLETSKGKGKRGGSGPTMPAMEMGDMGSPKLKVLVVLLVAGALNFG
Ga0209908_1002583313300027745Thawing PermafrostMIRINLLENSKGKSKRAGGSGAAMPTMEMGDMGSPKLKVLVV
Ga0209655_1014285323300027767Bog Forest SoilMIKINLLENSKGKNKRSGGGAGPSLPAMEMGDLGSPKLKVLVV
Ga0209580_1053675113300027842Surface SoilMIKINLLESSKGKGKRGGGGGPSMPSMEMGDMGSPKLKVLVVLVIAGLFNLG
Ga0209415_1107004913300027905Peatlands SoilMIKINLLESSKGKNKRGGSSGPAMPTMEMGDMGSPKLKV
Ga0209006_1036835213300027908Forest SoilMIRINLLESSKGKNKRAGGSSAPVMPTMEMGDMGSPRLKVLAVVVVA
Ga0209698_1104347113300027911WatershedsMIKINLLENSKGKGKRGGSGPSMPTMEMGDMGSPKLKIL
Ga0265351_102368423300028020SoilMIKINLLESSKGKNKRGGSNAPTMPSMEMGDMGSPKLKVLVVLLLAGS
Ga0209526_1064995923300028047Forest SoilMIRINLLESSKAKNKRAGGSSGPVMPAMEMGDMGSPKLKV
Ga0302144_1013251223300028560BogMIRINLLENSKGKSKRAGGSSGPAMPSMEFGDMGSPKLKVLVVLLVAGL
Ga0302219_1012353713300028747PalsaMIKINLLETSKGKRGGGGPSMPTMEVGDMGSPKLKVLAVLVIA
Ga0302219_1043287923300028747PalsaMIKINLLESARGKKKGSGGSPAMPTMEMGDMGSPKLKILVVL
Ga0265338_1003768013300028800RhizosphereMIKINLLENSKGKNRRGGGGPSMPTMEMGDMGSPKL
Ga0302197_1038130613300028873BogMIRINLLENSKGKNKRAGGSAAVMPTMDMGDMGSP
Ga0311329_1041701213300029907BogMIKINLLESAKGKNKRGAGGGSSMPKMEMGDMGSPKLKVLVVVLVVGL
Ga0311342_1002200773300029955BogMIRINLLESSKARNKRAGGGGPSMPKMEMGDMGSPSLKVLLIVLVAGLL
Ga0311353_1052307723300030399PalsaMIKINLLETAKGRNKRGGTSSAMPTMEVGNVGSPKMAVLVVLVVVALGNGMYWMR
Ga0311370_1015559743300030503PalsaMIRINLLENSKGKNRRAGGSGPSMPTMEMGDMGSPKLKVLVVI
Ga0311372_1092276013300030520PalsaMIRINLLENSKGKNRRAGGSGPSMPTMEMGDMGSPKL
Ga0210286_127401313300030597SoilMIKINLLESARGKKKGGGSSPAMPSMEMGDMGSPNH
Ga0310038_1045798923300030707Peatlands SoilMIKINLLENSKGKNKRGGGGPSMPSMEMGDMGSPKLKVLAVL
Ga0265460_1141379523300030740SoilMIKINLLETSKGKNKRGGSNAPAMPTMEVGDLGSPRLKVLVVVLV
Ga0302312_1008969023300030746PalsaMIKINLLESSKQKNKRGGSNAPAMPSMEMGDMGSPKLKVLVVLLVAGLLNF
Ga0265746_100784713300030815SoilMIKINLLESSKGKNKRGGSNAPSMPTMEMGDMGSPKLKVLLVLV
Ga0265746_103303313300030815SoilMIKINLLETAKGKNKRGGGAGPTMPTMEMGDMGSPKLKVLLVLVAVALFN
Ga0265767_10800723300030836SoilMIKINLLESARGKKKGSGGSPAMPTMEMGDMGSPKLKVLVILILAG
Ga0265742_100259323300030874SoilMIRINLLENSKGRSKRAGGGGPAMPTMEMGDMGSPKLKV
Ga0265743_11436223300030885SoilMIKINLLENSKGKSKRGGSGPSMPSMEMGDMGSPKLKILAVLVVA
Ga0170824_11455807213300031231Forest SoilMIRINLLETAKGKNKRGGSSGPAMPTMEMGDMGSPKL
Ga0302324_10124584513300031236PalsaMIKINLLESSKGKNKRGGSNGPAMPTMEMGDMGSPKLKVLVVL
Ga0302187_1032220613300031259BogMIRINLLENSKGKNKRAGGSAAVMPTMDMGDMGSPKL
Ga0302326_1044475113300031525PalsaMIKINLLESARGKKKGSGGSPAMPTMEMGDMGSPKLKILVVLI
Ga0307476_1072305423300031715Hardwood Forest SoilMIKINLLENSKAKNKRAGGGGPAMPTMEMGDMGSPKLKVLVVLLLAG
Ga0307476_1090693323300031715Hardwood Forest SoilMIKINLLESSKQKNKRGGSSAPAMPSMDMGDMGSPKLKVLVVLV
Ga0307477_1047574123300031753Hardwood Forest SoilMIRINLLETAKGKNKRAGGGVPTLPTMEMGDMGSPRLKVLAMLVVLG
Ga0307475_1016846113300031754Hardwood Forest SoilMIRINLLETAKGKNKRAGVPSMPSIELGDMGSPKLKVLVVLL
Ga0307478_1016028013300031823Hardwood Forest SoilMIRINLLETSKGKGKRGSSGPTMPAMEMGDMGSPKLKVLVVIL
Ga0307478_1073603523300031823Hardwood Forest SoilMIRINLLETAKGKNKRAGGSSGPTLPAMEMGDMGSPRLKVLAAVVLAGLL
Ga0307478_1103250623300031823Hardwood Forest SoilMIRINLLETSKGKNKRAGGSSVPAMPAMEMGDMGSPKLKVLVVLM
Ga0307478_1104621623300031823Hardwood Forest SoilMIKINLLESSKGKNKRGGSSGPAMPTMEMGDMGSPKLKVLVVLLL
Ga0307478_1129817813300031823Hardwood Forest SoilMIRINLLESSKAKNKRAGGSSGPVMPAMEMGDMGSPKLKVLVILIVAGALN
Ga0311301_1209757713300032160Peatlands SoilMIKINLLENSKGKSKRGGGGPSMPTMEMGDMGSPKLKILAVLVIAG
Ga0311301_1270850613300032160Peatlands SoilMIKINLLENSKGKKRGGSGPSMPTMEMGDMGSPKLKV
Ga0307470_1165417823300032174Hardwood Forest SoilMIKINLLENSKGKSKRGGGGGPSMPSMEMGDMGSTKLK
Ga0307472_10028377113300032205Hardwood Forest SoilMIKINLLENSKGKGKRGSSGPSMPTMEMGDMGSPK
Ga0306920_10080681013300032261SoilMIKINLLETSKGKGKRAGSGPSMPTMEMGDMGSPK
Ga0335080_1144680723300032828SoilMIKINLLETSKGKGKRGGSGPSMPSMEMGDMGSPKLKVLVVLVL
Ga0335080_1151771613300032828SoilMIKINLLETNKGKGKRGSGGGSGPSMPTIEMGDMGSPR
Ga0335081_1142984623300032892SoilMIKINLLETAKGKNKRGGGGPSMPSMEMGDMGSPKLKVLIVV
Ga0335069_1162329023300032893SoilMIKINLLETAKGKGKRGSGGGGPSMPTMDMGDMGSPKLKVLAIVVIAGLL
Ga0335072_1077705123300032898SoilMIKINLLETAKGKGKRGGGGGPSMPAIEMGDMGSPKL
Ga0335076_1093150223300032955SoilMIKINLLESSKGKGKRVSSGAMPSMPTMEMGDMGSPKLKILVVVV
Ga0335073_1021104343300033134SoilMIKINLLETAKGKGKRSGGGSSGPSLPSMELGNLGS
Ga0335077_1031649213300033158SoilMIKINLLETNKGKGKRGSGGGSGPSMPSIEMGDMGSPTLKIL
Ga0316624_1120147123300033486SoilMIKINLLETNKGKGKRGSGGGPSMPTMEMGDMGSPKLKVLVVLVLAGL
Ga0334854_019335_1507_16473300033829SoilMIRINLLENSKGKSKRAGGSGAAMPTMEMGDMGSPKLKVLVVLIVAG
Ga0326724_0621215_2_1483300034091Peat SoilMIKINLLETAKGKNKRGGGGPALPTMEMGDMGSPKLKVLVVLVAAGLFN

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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