Metagenome Family F055812

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055812
Family Type	Metagenome
Number of Sequences	138
Average Sequence Length	86 residues
Representative Sequence	MPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTSSRELAAQQSAECRRRAESLSRLIESRGARPLPQIA
Number of Associated Samples	97
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	16.67 %
% of genes near scaffold ends (potentially truncated)	23.19 %
% of genes from short scaffolds (< 2000 bps)	75.36 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.217 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere (16.667 % of family members)
Environment Ontology (ENVO)	Unclassified (50.725 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.319 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 77.27% β-sheet: 0.00% Coil/Unstructured: 22.73%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF03795	YCII	19.57
PF02694	UPF0060	6.52
PF08281	Sigma70_r4_2	3.62
PF01925	TauE	2.90
PF12543	DUF3738	2.17
PF04542	Sigma70_r2	2.17
PF13561	adh_short_C2	1.45
PF00815	Histidinol_dh	0.72
PF04366	Ysc84	0.72
PF02870	Methyltransf_1N	0.72
PF01960	ArgJ	0.72
PF07927	HicA_toxin	0.72
PF13847	Methyltransf_31	0.72
PF02417	Chromate_transp	0.72
PF12838	Fer4_7	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	19.57
COG1742	Uncharacterized inner membrane protein YnfA, drug/metabolite transporter superfamily	General function prediction only [R]	6.52
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	2.90
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.17
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.17
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.17
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.17
COG0141	Histidinol dehydrogenase	Amino acid transport and metabolism [E]	0.72
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	0.72
COG1364	Glutamate N-acetyltransferase (ornithine transacetylase)	Amino acid transport and metabolism [E]	0.72
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.72
COG2059	Chromate transport protein ChrA	Inorganic ion transport and metabolism [P]	0.72
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.22 %
Unclassified	root	N/A	34.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.22 %
Unclassified	root	N/A	34.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.22 %
Unclassified	root	N/A	34.78 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	42.75 %
Unclassified	root	N/A	34.78 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.45 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.78 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	13.77 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.17 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.72 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.72 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.72 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.78 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.80 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2.17 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.17 %
Candidatus Acidoferrales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales	1.45 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.72 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.72 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.72 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.78 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.80 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	2.17 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.45 %
Candidatus Acidoferrum	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum	1.45 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.72 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.72 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.72 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.72 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.78 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.45 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.72 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.72 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.72 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.72 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.72 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.72 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.78 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.45 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.72 %
unclassified Luteitalea	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea	0.72 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.72 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.72 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.72 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.72 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	34.78 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.17 %
Candidatus Acidoferrum panamensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1.45 %
Luteitalea sp.	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	0.72 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.72 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.72 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.72 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.72 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.72 %
Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	0.72 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459010\|GIO7OMY01BL05W	Not Available	531	Open in IMG/M
2170459015\|G14TP7Y02HM5OW	Not Available	715	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101758638	All Organisms → cellular organisms → Bacteria → Acidobacteria	2277	Open in IMG/M
3300004092\|Ga0062389_100503974	All Organisms → cellular organisms → Bacteria	1358	Open in IMG/M
3300004092\|Ga0062389_104448160	Not Available	527	Open in IMG/M
3300005329\|Ga0070683_101094305	Not Available	765	Open in IMG/M
3300005329\|Ga0070683_101256998	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300005330\|Ga0070690_100244749	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1266	Open in IMG/M
3300005330\|Ga0070690_101404004	Not Available	562	Open in IMG/M
3300005335\|Ga0070666_10019922	All Organisms → cellular organisms → Bacteria → Proteobacteria	4333	Open in IMG/M
3300005338\|Ga0068868_100007480	All Organisms → cellular organisms → Bacteria	7779	Open in IMG/M
3300005338\|Ga0068868_101071170	Not Available	740	Open in IMG/M
3300005339\|Ga0070660_100701917	All Organisms → cellular organisms → Bacteria → Acidobacteria	848	Open in IMG/M
3300005355\|Ga0070671_100662050	All Organisms → cellular organisms → Bacteria → Acidobacteria	904	Open in IMG/M
3300005366\|Ga0070659_101585285	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	584	Open in IMG/M
3300005445\|Ga0070708_100439453	All Organisms → cellular organisms → Bacteria	1231	Open in IMG/M
3300005458\|Ga0070681_10018224	All Organisms → cellular organisms → Bacteria	7017	Open in IMG/M
3300005458\|Ga0070681_10447587	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1203	Open in IMG/M
3300005458\|Ga0070681_10687678	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300005534\|Ga0070735_10226849	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	1137	Open in IMG/M
3300005536\|Ga0070697_100699553	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	894	Open in IMG/M
3300005538\|Ga0070731_10803894	Not Available	624	Open in IMG/M
3300005548\|Ga0070665_100076688	All Organisms → cellular organisms → Bacteria → Acidobacteria	3349	Open in IMG/M
3300005548\|Ga0070665_100463262	All Organisms → cellular organisms → Bacteria	1278	Open in IMG/M
3300005563\|Ga0068855_100006767	All Organisms → cellular organisms → Bacteria	13904	Open in IMG/M
3300005563\|Ga0068855_100121346	All Organisms → cellular organisms → Bacteria	2991	Open in IMG/M
3300005564\|Ga0070664_100776263	Not Available	895	Open in IMG/M
3300005577\|Ga0068857_100914286	Not Available	842	Open in IMG/M
3300005614\|Ga0068856_100109669	All Organisms → cellular organisms → Bacteria → Acidobacteria	2756	Open in IMG/M
3300005614\|Ga0068856_100307855	All Organisms → cellular organisms → Bacteria → Acidobacteria	1602	Open in IMG/M
3300005616\|Ga0068852_100140226	All Organisms → cellular organisms → Bacteria → Acidobacteria	2236	Open in IMG/M
3300005616\|Ga0068852_100696095	Not Available	1026	Open in IMG/M
3300005616\|Ga0068852_102480204	Not Available	539	Open in IMG/M
3300005618\|Ga0068864_100061093	All Organisms → cellular organisms → Bacteria → Acidobacteria	3264	Open in IMG/M
3300005836\|Ga0074470_10176983	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	2532	Open in IMG/M
3300006047\|Ga0075024_100237417	Not Available	869	Open in IMG/M
3300006050\|Ga0075028_100296716	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300006052\|Ga0075029_100081689	All Organisms → cellular organisms → Bacteria → Acidobacteria	1915	Open in IMG/M
3300006057\|Ga0075026_100609487	Not Available	642	Open in IMG/M
3300006059\|Ga0075017_100165765	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1582	Open in IMG/M
3300006059\|Ga0075017_100170807	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1559	Open in IMG/M
3300006162\|Ga0075030_100743189	All Organisms → cellular organisms → Bacteria → Acidobacteria	776	Open in IMG/M
3300006237\|Ga0097621_100413882	All Organisms → cellular organisms → Bacteria → Acidobacteria	1209	Open in IMG/M
3300006237\|Ga0097621_101388566	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300006638\|Ga0075522_10026654	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	3555	Open in IMG/M
3300006638\|Ga0075522_10506822	Not Available	558	Open in IMG/M
3300006903\|Ga0075426_10753051	Not Available	732	Open in IMG/M
3300009093\|Ga0105240_10000904	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	53010	Open in IMG/M
3300009093\|Ga0105240_10251703	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2043	Open in IMG/M
3300009093\|Ga0105240_10511715	Not Available	1333	Open in IMG/M
3300009093\|Ga0105240_11080336	Not Available	855	Open in IMG/M
3300009093\|Ga0105240_11708330	Not Available	657	Open in IMG/M
3300009098\|Ga0105245_10014095	All Organisms → cellular organisms → Bacteria	6964	Open in IMG/M
3300009098\|Ga0105245_10806320	Not Available	977	Open in IMG/M
3300009101\|Ga0105247_10052649	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2510	Open in IMG/M
3300009101\|Ga0105247_11208607	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300009143\|Ga0099792_10282812	Not Available	978	Open in IMG/M
3300009174\|Ga0105241_10065892	All Organisms → cellular organisms → Bacteria → Acidobacteria	2800	Open in IMG/M
3300009174\|Ga0105241_10141891	Not Available	1957	Open in IMG/M
3300009545\|Ga0105237_10249660	All Organisms → cellular organisms → Bacteria → Acidobacteria	1776	Open in IMG/M
3300009545\|Ga0105237_10514321	All Organisms → cellular organisms → Bacteria → Acidobacteria	1204	Open in IMG/M
3300010375\|Ga0105239_11040321	Not Available	942	Open in IMG/M
3300010375\|Ga0105239_13441834	Not Available	515	Open in IMG/M
3300012917\|Ga0137395_10825834	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300012931\|Ga0153915_10755935	All Organisms → cellular organisms → Bacteria	1125	Open in IMG/M
3300013296\|Ga0157374_11717127	Not Available	653	Open in IMG/M
3300014325\|Ga0163163_10636619	Not Available	1130	Open in IMG/M
3300014655\|Ga0181516_10287833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	835	Open in IMG/M
3300014838\|Ga0182030_10412174	All Organisms → cellular organisms → Bacteria	1400	Open in IMG/M
3300014838\|Ga0182030_10514275	Not Available	1190	Open in IMG/M
3300014968\|Ga0157379_10033833	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4558	Open in IMG/M
3300014968\|Ga0157379_11312889	Not Available	699	Open in IMG/M
3300015242\|Ga0137412_10254398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1389	Open in IMG/M
3300017936\|Ga0187821_10424535	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	548	Open in IMG/M
3300020579\|Ga0210407_11101370	All Organisms → cellular organisms → Bacteria → Acidobacteria	602	Open in IMG/M
3300020580\|Ga0210403_11476828	Not Available	512	Open in IMG/M
3300025862\|Ga0209483_1242597	Not Available	699	Open in IMG/M
3300025900\|Ga0207710_10327469	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300025909\|Ga0207705_10049954	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3010	Open in IMG/M
3300025911\|Ga0207654_10056389	All Organisms → cellular organisms → Bacteria	2279	Open in IMG/M
3300025911\|Ga0207654_10058003	All Organisms → cellular organisms → Bacteria → Acidobacteria	2252	Open in IMG/M
3300025911\|Ga0207654_10080367	All Organisms → cellular organisms → Bacteria → Acidobacteria	1960	Open in IMG/M
3300025912\|Ga0207707_10081625	All Organisms → cellular organisms → Bacteria → Acidobacteria	2822	Open in IMG/M
3300025912\|Ga0207707_10162064	Not Available	1955	Open in IMG/M
3300025912\|Ga0207707_11586945	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	516	Open in IMG/M
3300025913\|Ga0207695_10004406	All Organisms → cellular organisms → Bacteria	19248	Open in IMG/M
3300025913\|Ga0207695_10007268	All Organisms → cellular organisms → Bacteria → Acidobacteria	14143	Open in IMG/M
3300025913\|Ga0207695_10197215	All Organisms → cellular organisms → Bacteria	1929	Open in IMG/M
3300025914\|Ga0207671_10446074	All Organisms → cellular organisms → Bacteria → Acidobacteria	1030	Open in IMG/M
3300025914\|Ga0207671_11114721	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	619	Open in IMG/M
3300025914\|Ga0207671_11119856	Not Available	618	Open in IMG/M
3300025920\|Ga0207649_11291907	Not Available	577	Open in IMG/M
3300025921\|Ga0207652_10093785	All Organisms → cellular organisms → Bacteria → Acidobacteria	2642	Open in IMG/M
3300025922\|Ga0207646_10746282	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	874	Open in IMG/M
3300025924\|Ga0207694_10081810	All Organisms → cellular organisms → Bacteria → Acidobacteria	2537	Open in IMG/M
3300025924\|Ga0207694_10294107	Not Available	1336	Open in IMG/M
3300025924\|Ga0207694_11897185	Not Available	500	Open in IMG/M
3300025927\|Ga0207687_10202647	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1552	Open in IMG/M
3300025934\|Ga0207686_10017275	All Organisms → cellular organisms → Bacteria → Acidobacteria	4064	Open in IMG/M
3300025934\|Ga0207686_10043027	All Organisms → cellular organisms → Bacteria → Acidobacteria	2765	Open in IMG/M
3300025934\|Ga0207686_10277672	All Organisms → cellular organisms → Bacteria → Acidobacteria	1235	Open in IMG/M
3300025935\|Ga0207709_10026217	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3345	Open in IMG/M
3300025941\|Ga0207711_10193320	All Organisms → cellular organisms → Bacteria → Acidobacteria	1855	Open in IMG/M
3300025942\|Ga0207689_10292156	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1350	Open in IMG/M
3300025944\|Ga0207661_10597779	All Organisms → cellular organisms → Bacteria	1012	Open in IMG/M
3300025949\|Ga0207667_10529257	All Organisms → cellular organisms → Bacteria → Acidobacteria	1193	Open in IMG/M
3300025981\|Ga0207640_10156083	Not Available	1682	Open in IMG/M
3300026078\|Ga0207702_12256333	Not Available	533	Open in IMG/M
3300026142\|Ga0207698_10230902	Not Available	1680	Open in IMG/M
3300027660\|Ga0209736_1143779	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → unclassified Luteitalea → Luteitalea sp.	636	Open in IMG/M
3300027775\|Ga0209177_10445127	Not Available	529	Open in IMG/M
3300027869\|Ga0209579_10477315	All Organisms → cellular organisms → Bacteria → Acidobacteria	677	Open in IMG/M
3300027894\|Ga0209068_10025011	All Organisms → cellular organisms → Bacteria	2929	Open in IMG/M
3300027894\|Ga0209068_10661743	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300027908\|Ga0209006_10358173	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300027911\|Ga0209698_10746757	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300027915\|Ga0209069_10255783	Not Available	913	Open in IMG/M
3300027986\|Ga0209168_10306877	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Candidatus Acidoferrales → Candidatus Acidoferrum → Candidatus Acidoferrum panamensis	779	Open in IMG/M
3300028379\|Ga0268266_10128939	All Organisms → cellular organisms → Bacteria → Acidobacteria	2260	Open in IMG/M
3300028800\|Ga0265338_10116946	All Organisms → cellular organisms → Bacteria	2135	Open in IMG/M
3300029999\|Ga0311339_11381749	Not Available	634	Open in IMG/M
3300031122\|Ga0170822_15221003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_12_FULL_66_21	634	Open in IMG/M
3300031128\|Ga0170823_10127876	Not Available	546	Open in IMG/M
3300031231\|Ga0170824_102025018	Not Available	535	Open in IMG/M
3300031231\|Ga0170824_105431244	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300031231\|Ga0170824_128398420	All Organisms → cellular organisms → Bacteria → Acidobacteria	906	Open in IMG/M
3300031234\|Ga0302325_10080417	All Organisms → cellular organisms → Bacteria	6236	Open in IMG/M
3300031236\|Ga0302324_100148645	All Organisms → cellular organisms → Bacteria → Acidobacteria	3845	Open in IMG/M
3300031249\|Ga0265339_10144076	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1210	Open in IMG/M
3300031474\|Ga0170818_108916024	Not Available	819	Open in IMG/M
3300031708\|Ga0310686_101379437	All Organisms → cellular organisms → Bacteria → Acidobacteria	1832	Open in IMG/M
3300031708\|Ga0310686_119108237	All Organisms → cellular organisms → Bacteria → Acidobacteria	821	Open in IMG/M
3300031715\|Ga0307476_10580544	Not Available	831	Open in IMG/M
3300031754\|Ga0307475_10860787	All Organisms → cellular organisms → Bacteria	717	Open in IMG/M
3300031823\|Ga0307478_10633092	Not Available	895	Open in IMG/M
3300031962\|Ga0307479_10729110	Not Available	969	Open in IMG/M
3300032174\|Ga0307470_11574678	Not Available	549	Open in IMG/M
3300032515\|Ga0348332_10737167	Not Available	999	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.00%
Environmental	Environmental	49.28%
Engineered	Engineered	0.72%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.00%
Terrestrial	Environmental → Terrestrial	36.96%
Aquatic	Environmental → Aquatic	12.32%
Solid Waste	Engineered → Solid Waste	0.72%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	36.23%
Soil	Environmental → Terrestrial → Soil	34.06%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.59%
Sediment	Environmental → Aquatic → Sediment	8.70%
Freshwater	Environmental → Aquatic → Freshwater	3.62%
Peat	Environmental → Terrestrial → Peat	2.17%
Roots	Host-Associated → Plants → Roots	2.17%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.72%
Grass	Engineered → Solid Waste → Grass	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	27.54%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	20.29%
Loam	Environmental → Terrestrial → Soil → Loam	12.32%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.59%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.70%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.62%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.17%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.45%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.72%
Composting	Engineered → Solid Waste → Grass → Composting	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	27.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.59%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.87%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	9.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.70%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.52%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.17%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.17%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.45%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.45%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.72%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.72%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	16.67%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	8.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	7.25%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.97%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.07%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.35%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.62%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.62%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.17%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.17%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.17%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.17%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.45%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	1.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.45%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.72%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.72%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.72%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.72%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2170459015	Litter degradation PV4	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031249	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F62_06895250	2170459010	Grass Soil	MPFWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRILAAQNAAECRRRAEELSREIESRGAHPLPQIA
4PV_03087900	2170459015	Switchgrass, Maize And Mischanthus Litter	MPFWPEKIEERSLDEMFRLQASNRAWSKQLRQESQVLVNSRLAKTISMEEYSSSRELAAQQSAECRRRADSLSRLIEARGARP
INPhiseqgaiiFebDRAFT_1017586384	3300000364	Soil	MPLWPDNIEECSLDEMFRLQACNRAWSKQLRQETQTLVNSRLAKVISMEEYASSRDLAAQQSTECRRRAESLSRLIEARGARPLPQIA*
Ga0062389_1005039743	3300004092	Bog Forest Soil	MPVWPEKIEERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKNISMEEYASSRILAAQSSAECRRRAETLAREIESRGAHPLPQIA*
Ga0062389_1044481602	3300004092	Bog Forest Soil	WPEKIEERSLDEMFRLQASNRAWSKQLRQESQVLVNSRLAKTISMEEYSSSRDRAAEQSAECRRRAESLSRLIESRGARPLPQMA*
Ga0070683_1010943051	3300005329	Corn Rhizosphere	MPFWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKSISLEEYASSRQLAAQNAAECRRRAEALSREIESRGAHPLPQIA*
Ga0070683_1012569981	3300005329	Corn Rhizosphere	MPIWPDNIEELSLDEMFRLQACNRAWSKQLRQKSQALVNSRLAKIISLEEYASSREQAAQQAIECRRRADVLSRLIESRGAHPLPQIA*
Ga0070690_1002447492	3300005330	Switchgrass Rhizosphere	MPFWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRQLAAQNAAECRRRAETLSREIESRGAHPLPQIA*
Ga0070690_1014040042	3300005330	Switchgrass Rhizosphere	LDEMFRLQACNRAWSKQLRQETQTLVNSRLAKVISMEEYSSSRDLAAQQSAECRRRAESLSRLIEARGARPLPQIA*
Ga0070666_100199226	3300005335	Switchgrass Rhizosphere	MPFWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKSISLEEYASSRQLAAQNAAECRRRAETLSREIESRGAHPLPQIA*
Ga0068868_1000074803	3300005338	Miscanthus Rhizosphere	VTPNWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTVSRELAAQESAECRRRAESLSRLIESRGARPLPQIA*
Ga0068868_1010711701	3300005338	Miscanthus Rhizosphere	MIPFWPDKIEERNLDEMFRLQAENRAWSKQLRLEAQVLVNTRLAKTISMEEYPVSRQQAAERTEECRRRAATLSREIENRGAHPLPQIA*
Ga0070660_1007019172	3300005339	Corn Rhizosphere	MPNWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTASRELAAQQSAECRRRAESLSRLIESRGARPLPQIA*
Ga0070671_1006620502	3300005355	Switchgrass Rhizosphere	MPLWPDNIEECSLDEMFRLQACNRAWSKQLRQETQTLVNSRLAKVISMEEYSSSRDLAAQQSAECRRRAESLSRLIEARGARPLPQIA*
Ga0070659_1015852851	3300005366	Corn Rhizosphere	MPFWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKSISLEEYASSRQLAAQNAAECRRRAEAL
Ga0070708_1004394532	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRQLAAQNAAECRRRAEALSREIESRGAHPLPQIA*
Ga0070681_100182243	3300005458	Corn Rhizosphere	MPIWLDNIEELSLDEMFRLQACNRAWSKQLRQKSQALVNSRLAKIISLEEYASSREQAAQQAIECRRRADVLSRLIESRGAHPLPQIA*
Ga0070681_104475872	3300005458	Corn Rhizosphere	MPFWPENIEERSLDEMFRLQACNRAWSKQLRQESQVLVNNRLAKIISMEEYSSSRELAAQQVAECRRRAESLSRQIESRGARPLPQIA*
Ga0070681_106876782	3300005458	Corn Rhizosphere	MPSWPDKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKSISLEEYASSRQLAAQNAAECRRRAEALSREIESRGAHPLPQIA*
Ga0070735_102268493	3300005534	Surface Soil	MPFWPENIEEQSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYASSRELAAQQSVECRRRAESLSRLIESRGARPLPQIA*
Ga0070697_1006995532	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPFWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRQLAAQNAAECRRRAEALSREIESRGAHPLPQIA*
Ga0070731_108038941	3300005538	Surface Soil	MPFWPEKIEERSLDEMFHLQASNRAWSKQLRQESQVLVNSRLAKVISMEEYTTSRELAAQQSAECRRRAESLSRLIESRGAHPLPQIA*
Ga0070665_1000766883	3300005548	Switchgrass Rhizosphere	VTPNWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTASRELAAQQSAECRRRAESLSRLIESRGARPLPQIA*
Ga0070665_1004632624	3300005548	Switchgrass Rhizosphere	MPSWPDKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKSISLEEYASSRLLAAQNAAECRRRAEALSREIESRGAHPLPQIA*
Ga0068855_10000676711	3300005563	Corn Rhizosphere	MFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRQLAAQNAAECRRRAEALSREIENRGARPLPQIA*
Ga0068855_1001213465	3300005563	Corn Rhizosphere	MPFWPDKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRLVAAQNAAECRRRADELTREIESRGAHPLPQIA*
Ga0070664_1007762633	3300005564	Corn Rhizosphere	IVMVDYSSRQFEPIIQTVMPFWPEKIEERSLDEMFRLQASNRAWSKQLRQESQVLVNSRLAKTISMEEYSSSRELAAQQSAECRRRADSLSRLIEARGARPLPQIA*
Ga0068857_1009142863	3300005577	Corn Rhizosphere	MPFWPEKIEERSLDEMFRLQASNRAWSKQLRQESQVLVNSRLAKTISMEEYSSSRELAAQQSAECRRRADSLSRLIEARGARPLPQIA*
Ga0068856_1001096694	3300005614	Corn Rhizosphere	MPFWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRLVAAQNAAECRRRADELTREIESRGAHPLPQIA*
Ga0068856_1003078553	3300005614	Corn Rhizosphere	MPFWPEKIEERSLDEMFRLQASNRAWSKQLRQESQVLVNSRLAKTISMEEYSSSRELPPNNRLNAAVEQTRCRV*
Ga0068852_1001402262	3300005616	Corn Rhizosphere	MPIWPENIEERSLDEMFRLQACNRAWSKQLRQESQALVNSRLAKIISLEEYASSREQAAQQAIECRRRADVLSRLIESRGAHPLPQIA*
Ga0068852_1006960951	3300005616	Corn Rhizosphere	LDEMFRLQASNRAWSKQLRQESQVLVNSRLAKTISMEEYSSSRELAAQQSAECRRRADSLSRLIEARGARPLPQIA*
Ga0068852_1024802041	3300005616	Corn Rhizosphere	MPYWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRLVAAQNAAECRRRADELTREIESRGAHPLPQIA*
Ga0068864_1000610934	3300005618	Switchgrass Rhizosphere	MPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTSSRELAAQQSAECRRRAESLSRLIESRGARPLPQIA*
Ga0074470_101769833	3300005836	Sediment (Intertidal)	MPFWPEKIAERSLDEMFRLQASNRAWSKQLRHESQVLVNSRLAKTISMEEYTSSRQLAAQQAAECRRRAEVLSREIESRGAHPLPQLA*
Ga0075024_1002374171	3300006047	Watersheds	MQVGADKISVMPFWPENIEDGSLDEMFRLQASNRAWSKQLRQESQVLVNSRLAKVISMEEYTSSRELAAQQSAECRRRAESLSRLIESRGARPLPQIA*
Ga0075028_1002967162	3300006050	Watersheds	MPFWPEKIEERSLDEMFRLQAENRAWSKQLRVEAQALVNTRLAKGISLEEYASSRLRAAESSAECRRRAATLSREIENRGAHPLPQIA*
Ga0075029_1000816894	3300006052	Watersheds	MPFWPENIDEQSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYSISRDLAAQQSAECRRRAESLSQLIESRGARRLPQIA*
Ga0075026_1006094871	3300006057	Watersheds	MPFWPEKIEERSLDEMFRLQAENRAWSKQLRLEAQVLVNTRLAKNISMEEYTSSRQQAAESTAECRRRAATLSREIETRGAHPLPQIA*
Ga0075017_1001657653	3300006059	Watersheds	MPFWPDKIEERSLDEMFHLQASNRAWSKQLRQESQVLVNSRLAKVISMEEYTTSRELAAQQSAECRRRAESLSRLIESRGAHPLPQIA*
Ga0075017_1001708073	3300006059	Watersheds	MPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYSSSRELAAQQSAECRRRAESLSRLIESRGARPLPQIA*
Ga0075030_1007431892	3300006162	Watersheds	VMPFWPENIDEQSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYSISRDLAAQQSAECRRRAESLSQLIESRGARRLPQIA*
Ga0097621_1004138823	3300006237	Miscanthus Rhizosphere	VTPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYASSRELAAQQSAECRRRAESLSRLIESRGARPLPQIA*
Ga0097621_1013885661	3300006237	Miscanthus Rhizosphere	LADNITVMPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYASSRELAAKQSAECRRRAESLSRLIESRGARPLPQIA*
Ga0075522_100266545	3300006638	Arctic Peat Soil	MPYWPENIEEGSLDEMFRLQACNRAWSKQLRQESQVLVNKRLAKDISMEEYSASRELAAQQSAECRRRADWLSRQIESRGTHPLPQIA*
Ga0075522_105068222	3300006638	Arctic Peat Soil	MPFWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRLLAAENAAECRRRADELTREIESRGAHPLPQIA*
Ga0075426_107530512	3300006903	Populus Rhizosphere	MPIWPEKIEERSLDEMFRLQASNRAWSKQLRQESQVLVNSRLAKTISMEEYSSSRELAAQQSAECRRRADSLSRLIEARGARPLPQIA*
Ga0105240_1000090426	3300009093	Corn Rhizosphere	MPYWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRQLAAQNAAECRRRAEALSREIENRGARPLPQIA*
Ga0105240_102517034	3300009093	Corn Rhizosphere	RLQAENRAWSKQLRMETQALVNTRLAKSISLEEYASSRQLAAQNAAECRRRAEALSREIESRGAHPLPQIA*
Ga0105240_105117153	3300009093	Corn Rhizosphere	MPYWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRLLAAQNAAECRRRAEELSREIESRGAHPLPQIA*
Ga0105240_110803363	3300009093	Corn Rhizosphere	IWPENIEERSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKTISMEEYSSSRELAAQQSAECRRRADSLSRLIEARGARPLPQIA*
Ga0105240_117083301	3300009093	Corn Rhizosphere	QERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKSISLEEYASSRQLAAQNAAECRRRAEALSREIESRGAHPLPQIA*
Ga0105245_100140954	3300009098	Miscanthus Rhizosphere	MPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTSSRELAAQQSAECRRRADSLSRLIESRGARPLPQIA*
Ga0105245_108063202	3300009098	Miscanthus Rhizosphere	MIPFWPDKIEERNLDEMFRLQAENRAWSKQLRLEAQVLVNTRLAKTISMEEYTVSRQQAAERTEECRRRAATLSREIENRGAHPLPQIA*
Ga0105247_100526495	3300009101	Switchgrass Rhizosphere	FRLQACNRAWSKQLRQETQTLVNSRLAKVISMEEYSSSRDLAAQQSAECRRRAESLSRLIEARGARPLPQIA*
Ga0105247_112086072	3300009101	Switchgrass Rhizosphere	MPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTSSRELAAQQSAECRRRAESLS
Ga0099792_102828123	3300009143	Vadose Zone Soil	EKIEERTLEEMFRLQAENRAWSKQLRLEAQALVNTRLAKGISLEEYASSRLRAAESSAECRRRAATLSREIENRGAHPLPQIA*
Ga0105241_100658924	3300009174	Corn Rhizosphere	MPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYASSRELAAKQSAECRRRAESLSRLIESRGARPLPQIA*
Ga0105241_101418912	3300009174	Corn Rhizosphere	MPFWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYTSSRLVAAQNAAECRRRADELTREIESRGAHPLPQIA*
Ga0105237_102496602	3300009545	Corn Rhizosphere	VTPKWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTVSRELAAQESAECRRRAESLSRLIESRGARPLPQIA*
Ga0105237_105143212	3300009545	Corn Rhizosphere	MPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTYSRELAAQQSAECRRRADSLSRLIESRGARPLPQIA*
Ga0105239_110403213	3300010375	Corn Rhizosphere	MPIWPENIEERSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKIISLEEYASSREQAAQQAIECRRRADVLSRLIESRGAHPLPQIA*
Ga0105239_134418341	3300010375	Corn Rhizosphere	MPNWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTVSRELAAQESAECRLRAESLSRLIESRGARPLPQIA*
Ga0137395_108258342	3300012917	Vadose Zone Soil	MPFWPEKIEERTLEEMFRLQAENRAWSKQLRLEAQALVNTRLAKGISLEEYASSRLRAAESSAECRRRAATLSREIENRGAHPLPQIA*
Ga0153915_107559353	3300012931	Freshwater Wetlands	MPFWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRLLAAQNAAECRRRAEALSREIESRGAHPLPQIA*
Ga0157374_117171271	3300013296	Miscanthus Rhizosphere	SLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTSSRELAAQQSAECRRRADSLSRLIESRGARPLPQIA*
Ga0163163_106366191	3300014325	Switchgrass Rhizosphere	RSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRQLAAQNAAECRRRAETLSREIESRGAHPLPQIA*
Ga0181516_102878332	3300014655	Bog	MRVAADKTDVMPFWPEKIEEGSLDEMFRLQASNRAWSKQLRQESQVLVNNRLAKVISMEEYSASRDVAAQQAAECRRRAEILSRLIESRGARPLPQIA*
Ga0182030_104121741	3300014838	Bog	MPFWPDKIQERSLDEMFRLQAENRAWSKQLRMEMQVLVNARLAKTISLEEYASSRLVAAENAAECRRRAETLSREIESRGAHPLPQIA*
Ga0182030_105142753	3300014838	Bog	MRVAADNTSVMPAWPEKIEEGSLDEMFRLQASNRAWSKQLRQESQVLVNSRLAKVISMEEYSISRDLAAEKAAECRRRAEALSRLIESRGARPLPQIA*
Ga0157379_100338336	3300014968	Switchgrass Rhizosphere	MPLWPDNIEDCSLDEMFRLQACNRAWSKQLRQETQTLVNSRLAKVISMEEYSSSRDLAAQQSAECRRRAESLSRLIEARGARPLPQIA*
Ga0157379_113128892	3300014968	Switchgrass Rhizosphere	VTPNWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTSSRELAAQQSAECRRRADSLSRLIESRGARPLPQIA*
Ga0137412_102543982	3300015242	Vadose Zone Soil	VTPFWPENIEEHNLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTSSRELGAQQSAECRRRAESLSRLIESRGARPLPQIA*
Ga0187821_104245352	3300017936	Freshwater Sediment	MFRLQAENRAWSTELRMETQALVNTRLAKTISLEEYASSRQLAAQNAAECRRRAEALSREIESRGAHPLPQIA
Ga0210407_111013701	3300020579	Soil	MPFWPEKIEERSLDEMFRLQASNRAWSKQLRQESQVLVNKRLAKTISMEEYSSGRELAAQQSAECRRRAEWLSRQIESRGARPLPQIA
Ga0210403_114768281	3300020580	Soil	MPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYASSRELAARQSAECRRRAESLSRLIESRGARPLPQIA
Ga0209483_12425972	3300025862	Arctic Peat Soil	MPYWPENIEEGSLDEMFRLQACNRAWSKQLRQESQVLVNKRLAKDISMEEYSASRELAAQQSAECRRRADWLSRQIESRGTHPLPQIA
Ga0207710_103274692	3300025900	Switchgrass Rhizosphere	MPFWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRQLAAQNAAECRRRAETLSREIESRGAHPLPQIA
Ga0207705_100499544	3300025909	Corn Rhizosphere	MPIWPENIEERSLDEMFRLQACNRAWSKQLRQESQALVNSRLAKIISLEEYASSREQAAQQAIECRRRADVLSRLIESRGAHPLPQIA
Ga0207654_100563894	3300025911	Corn Rhizosphere	MPFWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKSISLEEYASSRQLAAQNAAECRRRAEALSREIESRGAHPLPQIA
Ga0207654_100580034	3300025911	Corn Rhizosphere	VTPNWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTVSRELAAQESAECRRRAESLSRLIESRGARPLPQIA
Ga0207654_100803674	3300025911	Corn Rhizosphere	MPSWPDKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKSISLEEYASSRQLAAQNAAECRRRAEALSREIESRGAHPLPQIA
Ga0207707_100816254	3300025912	Corn Rhizosphere	MPIWLDNIEELSLDEMFRLQACNRAWSKQLRQKSQALVNSRLAKIISLEEYASSREQAAQQAIECRRRADVLSRLIESRGAHPLPQIA
Ga0207707_101620644	3300025912	Corn Rhizosphere	MPFWPENIEERTLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISLEEYSSSRELAAQQVAECRRRAESLSRQIESRGARPLPQIA
Ga0207707_115869451	3300025912	Corn Rhizosphere	QERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRQLAAQNAAECRRRAEALSREIENRGARPLPQIA
Ga0207695_100044062	3300025913	Corn Rhizosphere	LTDNISVMPIWPENIEERSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKIISLEEYASSREQAAQQAIECRRRADVLSRLIESRGAHPLPQIA
Ga0207695_100072685	3300025913	Corn Rhizosphere	MFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRQLAAQNAAECRRRAEALSREIENRGARPLPQIA
Ga0207695_101972151	3300025913	Corn Rhizosphere	MFRLQAENRAWSKQLRMETQALVNTRLAKSISLEEYASSRQLAAQNAAECRRRAEALSREIESRGAHPLPQIA
Ga0207671_104460742	3300025914	Corn Rhizosphere	MPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTVSRELAAQESAECRRRAESLSRLIESRGARPLPQIA
Ga0207671_111147212	3300025914	Corn Rhizosphere	MPSWPDKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRLLAAQNAAECRRRAEELSREIESRGAHPLPQIA
Ga0207671_111198561	3300025914	Corn Rhizosphere	MPFWPEKIEERSLDEMFRLQASNRAWSKQLRQESQVLVNSRLAKTISMEEYSSSRELAAQQSAECRRRADSLSRLIEARGARPLPQIA
Ga0207649_112919071	3300025920	Corn Rhizosphere	MPIWPENIEERSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTVSRELAAQESAECRRRAESLSRLIESRGARPLPQIA
Ga0207652_100937853	3300025921	Corn Rhizosphere	MPIWPDNIEELSLDEMFRLQACNRAWSKQLRQKSQALVNSRLAKIISLEEYASSREQAAQQAIECRRRADVLSRLIESRGAHPLPQIA
Ga0207646_107462821	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRQLAAQNAAECRRRAEALSREIESRGAHPLPQIA
Ga0207694_100818103	3300025924	Corn Rhizosphere	LTDNISVMPIWPENIEERSLDEMFRLQACNRAWSKQLRQESQALVNSRLAKIISLEEYASSREQAAQQAIECRRRADVLSRLIESRGAHPLPQIA
Ga0207694_102941074	3300025924	Corn Rhizosphere	PENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTASRELAAQQSAECRRRAESLSRLIESRGARPLPQIA
Ga0207694_118971851	3300025924	Corn Rhizosphere	MPIWPDKIEERNLDEMFLLQASNRAWGKQLRQESQALVNSRLAKTISMEEYTSSRQSAAEQTAECRRRAETLSREIESRGAHPLPQIA
Ga0207687_102026473	3300025927	Miscanthus Rhizosphere	MPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTSSRELAAQQSAECRRRADSLSRLIESRGARPLPQIA
Ga0207686_100172755	3300025934	Miscanthus Rhizosphere	MPSWPDKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKSISLEEYASSRLLAAQNAAECRRRAEALSREIESRGAHPLPQIA
Ga0207686_100430272	3300025934	Miscanthus Rhizosphere	MPNWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTASRELAAQQSAECRRRAESLSRLIESRGARPLPQIA
Ga0207686_102776722	3300025934	Miscanthus Rhizosphere	VTPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYASSRELAAQQSAECRRRAESLSRLIESRGARPLPQIA
Ga0207709_100262175	3300025935	Miscanthus Rhizosphere	MPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTSSRELAAQQSAECRRRAESLSRLIESRGARPLPQIA
Ga0207711_101933203	3300025941	Switchgrass Rhizosphere	MPLWPDNIEECSLDEMFRLQACNRAWSKQLRQETQTLVNSRLAKVISMEEYSSSRDLAAQQSAECRRRAESLSRLIEARGARPLPQIA
Ga0207689_102921563	3300025942	Miscanthus Rhizosphere	MPSWPDKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRQLAAQNAAECRRRAETLSREIESRGAHPLPQIA
Ga0207661_105977792	3300025944	Corn Rhizosphere	MPFWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKSISLEEYASSRKLAAQNAAECRRRAEALSREIESRGAHPLPQIA
Ga0207667_105292573	3300025949	Corn Rhizosphere	MPFWPDKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRLVAAQNAAECRRRADELTREIESRGAHPLPQIA
Ga0207640_101560834	3300025981	Corn Rhizosphere	PIIQTVMPFWPEKIEERSLDEMFRLQASNRAWSKQLRQESQALVNSRLAKIISLEEYASSREQAAQQAIECRRRADVLSRLIESRGAHPLPQIA
Ga0207702_122563332	3300026078	Corn Rhizosphere	MPYWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRQLAAQNAAECRRRAEALSREIENRGARPLPQIA
Ga0207698_102309021	3300026142	Corn Rhizosphere	EKIEERSLDEMFRLQASNRAWSKQLRQESQVLVNSRLAKTISMEEYSSSRELAAQQSAECRRRADSLSRLIEARGARPLPQIA
Ga0209736_11437791	3300027660	Forest Soil	MPFWPEKIEERSLDEMFRLQAENRAWSKQLRLEAQALVNTRLAKGISLEEYASSRLRAAENSAECRRRAATLSREIENRGAHPLPQIA
Ga0209177_104451271	3300027775	Agricultural Soil	SLDVMFRLQASNRAWSKQLRQESQVLVNSRLAKTISMEEYSSSRELAAQQSAECRRRADSLSRLIEARGARPLPQIA
Ga0209579_104773151	3300027869	Surface Soil	MPFWPEKIEERSLDEMFHLQASNRAWSKQLRQESQVLVNSRLAKVISMEEYTTSRELAAQQSAECRRRAESLSRLIESRGAHPLPQIA
Ga0209068_100250113	3300027894	Watersheds	MPFWPEKIEERSLDEMFRLQAENRAWSKQLRVEAQALVNTRLAKGISLEEYASSRLRAAESSAECRRRAATLSREIENRGAHPLPQIA
Ga0209068_106617432	3300027894	Watersheds	MQVGADKISVMPFWPENIEDGSLDEMFRLQASNRAWSKQLRQESQVLVNSRLAKVISMEEYTSSRELAAQQSAECRRRAESLSR
Ga0209006_103581732	3300027908	Forest Soil	MPYWPENIEEGSLDEMFRLQACNRAWSKQLRQESQVLVNKRLAKVISMEEYSSSREMAAQQSAECRRRAEWLSRQIESRGTRPLPQIA
Ga0209698_107467572	3300027911	Watersheds	MPFWPENIDEQSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYSISRDLAAQQSAECRRRAESLSQLIESRGARRLPQIA
Ga0209069_102557831	3300027915	Watersheds	MQVGADKISVMPFWPENIEDGSLDEMFRLQASNRAWSKQLRQESQVLVNSRLAKVISMEEYTSSRELAAQQSAECRRRAESLSRLIESRGARPLPQIA
Ga0209168_103068771	3300027986	Surface Soil	MPFWPENIEEQSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYASSRELAAQQSVECRRRAESLSRLIESRGARPLPQIA
Ga0268266_101289394	3300028379	Switchgrass Rhizosphere	VTPNWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTASRELAAQQSAECRRRAESLSRLIESRGARPLPQIA
Ga0265338_101169463	3300028800	Rhizosphere	MPFWPDKINERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRLVAAQHAAECRRRAETLSREIESRGAHPLPQIA
Ga0311339_113817491	3300029999	Palsa	RSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKNISMEEYASSRILAAQSSAECRRRAETLAREIESRGAHPLPQIA
Ga0170822_152210032	3300031122	Forest Soil	MPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTSSREMAAQQSAECRRRAESLSRLIESRGARPLPQIA
Ga0170823_101278762	3300031128	Forest Soil	MPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYASSRELAAQQSAECRRRAESLSRMIESRGARPLPQIA
Ga0170824_1020250181	3300031231	Forest Soil	SLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTSSRELAAQQSTECRRRAESLSRLIESRGARPLPQIA
Ga0170824_1054312442	3300031231	Forest Soil	MPFWPEKIQERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRLLAAQNAAECRRRAETLSREIESRGAHPLPQIA
Ga0170824_1283984203	3300031231	Forest Soil	VTPTWPENIDERSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTASRELAAQQSAECRRRAESLSRLIESR
Ga0302325_100804173	3300031234	Palsa	MRVAADNTSVMPAWPEKIEEGSLDEMFRLQASNRAWSKQLRQESQVLVNSRLAKVISMEEYSISRDLAAEKAAECRRRAEALSRLIESRGARPLPQIA
Ga0302324_1001486457	3300031236	Palsa	MPVWPENLEERSLDEMFRLQAENRAWSKQLRMETQALVNTRLAKNISMEEYASSRILAAQSSAECRRRAETLAREIESRGAHPLPQIA
Ga0265339_101440764	3300031249	Rhizosphere	MFRLQAENRAWSKQLRMETQALVNTRLAKTISLEEYASSRLVAAQNAAECRRRAETLSREIESRGAHPLPQIA
Ga0170818_1089160242	3300031474	Forest Soil	MPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYTSSRELAAQQSTECRRRAESLSRLIESRGARPLPQIA
Ga0310686_1013794373	3300031708	Soil	MPYWPENIEEGSLDEMFRLQASNRAWSKQLRQESQVLVNKRLAKVISMEEYSSGRELAAQQSAECRRRAEWLSRQIESRGTRPLPQIA
Ga0310686_1191082371	3300031708	Soil	MPYWPENIEEGSLDEMFRLQACNRAWSKQLRQESQVLVNKRLAKDISMEEYSASRELAAQQSAECRRRADWLSRQIESRGARPLPQIA
Ga0307476_105805443	3300031715	Hardwood Forest Soil	MFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYATSRELAAQQSAECRRRAETLSRMIESRGARPLPQIA
Ga0307475_108607872	3300031754	Hardwood Forest Soil	MPFWPEKIEERSLDEMFRLQAENRAWSKQLRVEAQALVNTRLAKGISLEEYASSRLRAAESSAECRRRAAALSREIENRGAHPLPQIA
Ga0307478_106330921	3300031823	Hardwood Forest Soil	SLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYATSRELAAQQSAECRRRAETLSRMIESRGARPLPQIA
Ga0307479_107291103	3300031962	Hardwood Forest Soil	EMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYASSRELAARQSAECRRRAESLSRLIESRGARPLPQIA
Ga0307470_115746781	3300032174	Hardwood Forest Soil	VMPFWPENIEEHSLDEMFRLQACNRAWSKQLRQESQVLVNSRLAKVISMEEYASSREQAAQQSAECRRRAESLSRLIESRGARPLPQIA
Ga0348332_107371671	3300032515	Plant Litter	MPFWPEKIEERSLDEMFRLQAENRAWSKQLRLEAQALVNNRLAKGISLEEYASSRLLAAESSAECRRRAATLSREIENRSAHPLPQIA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F055812

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences