NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F055882

Metagenome / Metatranscriptome Family F055882

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F055882
Family Type Metagenome / Metatranscriptome
Number of Sequences 138
Average Sequence Length 40 residues
Representative Sequence KDANKPSLRRTSTSTDKSGDNKSDDDRPTLKRRDDSN
Number of Associated Samples 123
Number of Associated Scaffolds 138

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 88.41 %
Associated GOLD sequencing projects 116
AlphaFold2 3D model prediction Yes
3D model pTM-score0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (73.913 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(11.594 % of family members)
Environment Ontology (ENVO) Unclassified
(23.913 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(39.855 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 0.00%    Coil/Unstructured: 100.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.18
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 138 Family Scaffolds
PF00285Citrate_synt 22.46
PF07244POTRA 4.35
PF13490zf-HC2 3.62
PF08281Sigma70_r4_2 2.90
PF03466LysR_substrate 2.17
PF00072Response_reg 1.45
PF00535Glycos_transf_2 1.45
PF01061ABC2_membrane 1.45
PF05649Peptidase_M13_N 1.45
PF13188PAS_8 1.45
PF13185GAF_2 1.45
PF00582Usp 0.72
PF03703bPH_2 0.72
PF00732GMC_oxred_N 0.72
PF13620CarboxypepD_reg 0.72
PF05163DinB 0.72
PF13340DUF4096 0.72
PF07690MFS_1 0.72
PF00291PALP 0.72
PF00171Aldedh 0.72
PF13492GAF_3 0.72
PF01752Peptidase_M9 0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 138 Family Scaffolds
COG0372Citrate synthaseEnergy production and conversion [C] 22.46
COG3590Predicted metalloendopeptidasePosttranslational modification, protein turnover, chaperones [O] 1.45
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.72
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.72
COG2303Choline dehydrogenase or related flavoproteinLipid transport and metabolism [I] 0.72
COG2318Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)Secondary metabolites biosynthesis, transport and catabolism [Q] 0.72
COG3402Uncharacterized membrane protein YdbS, contains bPH2 (bacterial pleckstrin homology) domainFunction unknown [S] 0.72
COG3428Uncharacterized membrane protein YdbT, contains bPH2 (bacterial pleckstrin homology) domainFunction unknown [S] 0.72
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.72

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms73.91 %
UnclassifiedrootN/A26.09 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000893|AP72_2010_repI_A001DRAFT_1005836All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia2331Open in IMG/M
3300002245|JGIcombinedJ26739_100239498All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1704Open in IMG/M
3300002245|JGIcombinedJ26739_100463810All Organisms → cellular organisms → Bacteria1144Open in IMG/M
3300004092|Ga0062389_102412037Not Available696Open in IMG/M
3300004092|Ga0062389_104219829All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae540Open in IMG/M
3300005167|Ga0066672_10191831All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1299Open in IMG/M
3300005295|Ga0065707_10242613All Organisms → cellular organisms → Bacteria1151Open in IMG/M
3300005445|Ga0070708_100583241All Organisms → cellular organisms → Bacteria1054Open in IMG/M
3300005468|Ga0070707_100301580All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1557Open in IMG/M
3300005540|Ga0066697_10302120All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter941Open in IMG/M
3300005602|Ga0070762_11084040All Organisms → cellular organisms → Bacteria → Acidobacteria551Open in IMG/M
3300005618|Ga0068864_100966127All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium844Open in IMG/M
3300005841|Ga0068863_100225594All Organisms → cellular organisms → Bacteria → Acidobacteria1806Open in IMG/M
3300005844|Ga0068862_102362648All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium URHE0068543Open in IMG/M
3300006059|Ga0075017_100059052All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2594Open in IMG/M
3300006086|Ga0075019_10999773Not Available540Open in IMG/M
3300006162|Ga0075030_100196390All Organisms → cellular organisms → Bacteria1625Open in IMG/M
3300006162|Ga0075030_100536163Not Available930Open in IMG/M
3300006176|Ga0070765_100615396All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium1024Open in IMG/M
3300006796|Ga0066665_11354027All Organisms → cellular organisms → Bacteria → Acidobacteria549Open in IMG/M
3300009038|Ga0099829_11004652Not Available692Open in IMG/M
3300009101|Ga0105247_10218154All Organisms → cellular organisms → Bacteria → Acidobacteria1290Open in IMG/M
3300009174|Ga0105241_10049159All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3211Open in IMG/M
3300009518|Ga0116128_1088993Not Available922Open in IMG/M
3300009521|Ga0116222_1458840Not Available556Open in IMG/M
3300009616|Ga0116111_1040711All Organisms → cellular organisms → Bacteria → Acidobacteria1407Open in IMG/M
3300009632|Ga0116102_1026257All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1972Open in IMG/M
3300009637|Ga0116118_1012043All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3363Open in IMG/M
3300009698|Ga0116216_10928895All Organisms → cellular organisms → Bacteria520Open in IMG/M
3300009709|Ga0116227_10694640All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium769Open in IMG/M
3300009759|Ga0116101_1032233All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300009764|Ga0116134_1055447All Organisms → cellular organisms → Bacteria → Proteobacteria1504Open in IMG/M
3300009824|Ga0116219_10514085All Organisms → cellular organisms → Bacteria → Acidobacteria662Open in IMG/M
3300010048|Ga0126373_12910335Not Available534Open in IMG/M
3300010358|Ga0126370_12519598Not Available513Open in IMG/M
3300010373|Ga0134128_10138498All Organisms → cellular organisms → Bacteria → Acidobacteria2754Open in IMG/M
3300010376|Ga0126381_101541871All Organisms → cellular organisms → Bacteria960Open in IMG/M
3300010376|Ga0126381_103331345All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300010376|Ga0126381_104090526All Organisms → cellular organisms → Bacteria → Acidobacteria567Open in IMG/M
3300010379|Ga0136449_101070220Not Available1288Open in IMG/M
3300011080|Ga0138568_1024680All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium623Open in IMG/M
3300011269|Ga0137392_10409032All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1126Open in IMG/M
3300011271|Ga0137393_10103354All Organisms → cellular organisms → Bacteria2329Open in IMG/M
3300011271|Ga0137393_10237795All Organisms → cellular organisms → Bacteria1544Open in IMG/M
3300012199|Ga0137383_11083562All Organisms → cellular organisms → Bacteria → Acidobacteria581Open in IMG/M
3300012207|Ga0137381_11324561All Organisms → cellular organisms → Bacteria → Acidobacteria613Open in IMG/M
3300012362|Ga0137361_11267027All Organisms → cellular organisms → Bacteria → Acidobacteria661Open in IMG/M
3300012363|Ga0137390_10420768All Organisms → cellular organisms → Bacteria → Acidobacteria1313Open in IMG/M
3300012363|Ga0137390_11305634All Organisms → cellular organisms → Bacteria → Acidobacteria671Open in IMG/M
3300012519|Ga0157352_1014711All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter879Open in IMG/M
3300012917|Ga0137395_10523373All Organisms → cellular organisms → Bacteria → Acidobacteria855Open in IMG/M
3300012971|Ga0126369_12669170All Organisms → cellular organisms → Bacteria584Open in IMG/M
3300013100|Ga0157373_10427362All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis951Open in IMG/M
3300013105|Ga0157369_10905999All Organisms → cellular organisms → Bacteria904Open in IMG/M
3300013297|Ga0157378_10506055All Organisms → cellular organisms → Bacteria → Acidobacteria1207Open in IMG/M
3300014325|Ga0163163_11273254All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium798Open in IMG/M
3300014489|Ga0182018_10296714Not Available880Open in IMG/M
3300014492|Ga0182013_10092811All Organisms → cellular organisms → Bacteria → Acidobacteria2068Open in IMG/M
3300014838|Ga0182030_10609960All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1050Open in IMG/M
3300016294|Ga0182041_11276589Not Available671Open in IMG/M
3300016445|Ga0182038_11843426Not Available546Open in IMG/M
3300016750|Ga0181505_10525170All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300017822|Ga0187802_10137077All Organisms → cellular organisms → Bacteria932Open in IMG/M
3300017822|Ga0187802_10332139All Organisms → cellular organisms → Bacteria → Acidobacteria595Open in IMG/M
3300017933|Ga0187801_10322195All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300017933|Ga0187801_10353936Not Available604Open in IMG/M
3300017943|Ga0187819_10114084All Organisms → cellular organisms → Bacteria1613Open in IMG/M
3300017946|Ga0187879_10668560All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium578Open in IMG/M
3300017948|Ga0187847_10043664All Organisms → cellular organisms → Bacteria → Acidobacteria2594Open in IMG/M
3300017970|Ga0187783_11087673Not Available576Open in IMG/M
3300017972|Ga0187781_10625711Not Available776Open in IMG/M
3300017973|Ga0187780_10956140Not Available623Open in IMG/M
3300017975|Ga0187782_10344844Not Available1127Open in IMG/M
3300017988|Ga0181520_10650427All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis726Open in IMG/M
3300017995|Ga0187816_10064510Not Available1545Open in IMG/M
3300018004|Ga0187865_1320670All Organisms → cellular organisms → Bacteria → Acidobacteria509Open in IMG/M
3300018023|Ga0187889_10046951All Organisms → cellular organisms → Bacteria → Acidobacteria2333Open in IMG/M
3300018042|Ga0187871_10632758All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300018058|Ga0187766_10376817All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300018062|Ga0187784_11531902All Organisms → cellular organisms → Bacteria → Acidobacteria528Open in IMG/M
3300018085|Ga0187772_10380671All Organisms → cellular organisms → Bacteria979Open in IMG/M
3300018090|Ga0187770_11096300All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300018468|Ga0066662_10096853All Organisms → cellular organisms → Bacteria → Acidobacteria2075Open in IMG/M
3300019240|Ga0181510_1264943All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium603Open in IMG/M
3300019888|Ga0193751_1074472All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1375Open in IMG/M
3300021088|Ga0210404_10115945All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1371Open in IMG/M
3300021170|Ga0210400_10394993All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1140Open in IMG/M
3300021171|Ga0210405_11295472All Organisms → cellular organisms → Bacteria → Acidobacteria535Open in IMG/M
3300021181|Ga0210388_10537137All Organisms → cellular organisms → Bacteria1025Open in IMG/M
3300021478|Ga0210402_10756176All Organisms → cellular organisms → Bacteria → Acidobacteria896Open in IMG/M
3300021559|Ga0210409_11260525All Organisms → cellular organisms → Bacteria → Acidobacteria615Open in IMG/M
3300025500|Ga0208686_1036937All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1189Open in IMG/M
3300025906|Ga0207699_11488409Not Available501Open in IMG/M
3300025914|Ga0207671_10636347All Organisms → cellular organisms → Bacteria850Open in IMG/M
3300025922|Ga0207646_11749718All Organisms → cellular organisms → Bacteria → Acidobacteria533Open in IMG/M
3300025935|Ga0207709_10676066All Organisms → cellular organisms → Bacteria824Open in IMG/M
3300025972|Ga0207668_10399958All Organisms → cellular organisms → Bacteria1161Open in IMG/M
3300026078|Ga0207702_10971770All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis842Open in IMG/M
3300027652|Ga0209007_1021866Not Available1651Open in IMG/M
3300027655|Ga0209388_1218316Not Available524Open in IMG/M
3300027846|Ga0209180_10051983All Organisms → cellular organisms → Bacteria2262Open in IMG/M
3300027846|Ga0209180_10217022All Organisms → cellular organisms → Bacteria → Acidobacteria1102Open in IMG/M
3300027862|Ga0209701_10059119All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2445Open in IMG/M
3300027875|Ga0209283_10251004All Organisms → cellular organisms → Bacteria → Acidobacteria1173Open in IMG/M
3300027895|Ga0209624_10291109All Organisms → cellular organisms → Bacteria1087Open in IMG/M
3300027903|Ga0209488_11237095Not Available501Open in IMG/M
3300027908|Ga0209006_10106998All Organisms → cellular organisms → Bacteria → Acidobacteria2476Open in IMG/M
3300027908|Ga0209006_10372603All Organisms → cellular organisms → Bacteria → Acidobacteria1207Open in IMG/M
3300027911|Ga0209698_10678633Not Available786Open in IMG/M
3300028759|Ga0302224_10118261Not Available1027Open in IMG/M
3300028871|Ga0302230_10215060All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium745Open in IMG/M
3300029943|Ga0311340_10370521Not Available1329Open in IMG/M
3300030617|Ga0311356_10467894Not Available1236Open in IMG/M
3300030646|Ga0302316_10294017All Organisms → cellular organisms → Bacteria → Acidobacteria657Open in IMG/M
3300030659|Ga0316363_10389425All Organisms → cellular organisms → Bacteria → Acidobacteria543Open in IMG/M
3300030707|Ga0310038_10214138All Organisms → cellular organisms → Bacteria912Open in IMG/M
3300030906|Ga0302314_10887068Not Available878Open in IMG/M
3300031057|Ga0170834_104609478All Organisms → cellular organisms → Bacteria1954Open in IMG/M
3300031474|Ga0170818_108214814All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300031544|Ga0318534_10487361Not Available705Open in IMG/M
3300031708|Ga0310686_100215654Not Available1491Open in IMG/M
3300031938|Ga0308175_100491251Not Available1303Open in IMG/M
3300031942|Ga0310916_10702202Not Available856Open in IMG/M
3300031954|Ga0306926_10188838All Organisms → cellular organisms → Bacteria2557Open in IMG/M
3300031962|Ga0307479_11260097All Organisms → cellular organisms → Bacteria701Open in IMG/M
3300031962|Ga0307479_11678202Not Available589Open in IMG/M
3300031962|Ga0307479_11694941Not Available586Open in IMG/M
3300032160|Ga0311301_10045714All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis10278Open in IMG/M
3300032160|Ga0311301_11282036All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium928Open in IMG/M
3300032174|Ga0307470_10501952All Organisms → cellular organisms → Bacteria885Open in IMG/M
3300032180|Ga0307471_102780553All Organisms → cellular organisms → Bacteria → Acidobacteria621Open in IMG/M
3300032180|Ga0307471_104202363Not Available508Open in IMG/M
3300032205|Ga0307472_101929906All Organisms → cellular organisms → Bacteria → Acidobacteria590Open in IMG/M
3300032805|Ga0335078_10184362All Organisms → cellular organisms → Bacteria2917Open in IMG/M
3300032893|Ga0335069_12178303All Organisms → cellular organisms → Bacteria → Acidobacteria580Open in IMG/M
3300033807|Ga0314866_056239Not Available652Open in IMG/M
3300033822|Ga0334828_039847All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1343Open in IMG/M
3300033982|Ga0371487_0507973Not Available506Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil11.59%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil6.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.80%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland5.80%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland5.07%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland5.07%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.07%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment4.35%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.35%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.35%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa4.35%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds3.62%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.17%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.17%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.17%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.17%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil1.45%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.45%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.45%
BogEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Bog1.45%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil1.45%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.45%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.45%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.72%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.72%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.72%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.72%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.72%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.72%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.72%
SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Soil0.72%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.72%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.72%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.72%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.72%
Host-AssociatedHost-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated0.72%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000893Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004092Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005295Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3EnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146EnvironmentalOpen in IMG/M
3300005602Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2EnvironmentalOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006162Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012EnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009518Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150EnvironmentalOpen in IMG/M
3300009521Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaGEnvironmentalOpen in IMG/M
3300009616Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100EnvironmentalOpen in IMG/M
3300009632Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40EnvironmentalOpen in IMG/M
3300009637Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40EnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009709Host-associated microbial communities from peat moss isolated from Minnesota, USA - S1T2_Fb - Sphagnum magellanicum MGHost-AssociatedOpen in IMG/M
3300009759Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10EnvironmentalOpen in IMG/M
3300009764Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40EnvironmentalOpen in IMG/M
3300009824Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaGEnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010379Sb_50d combined assemblyEnvironmentalOpen in IMG/M
3300011080Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012519Unplanted soil (control) microbial communities from North Carolina - M.Soil.7.yng.070610EnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014492Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaGEnvironmentalOpen in IMG/M
3300014838Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300016750Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017933Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1EnvironmentalOpen in IMG/M
3300017943Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4EnvironmentalOpen in IMG/M
3300017946Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_10EnvironmentalOpen in IMG/M
3300017948Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10EnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017972Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300017988Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaGEnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018004Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100EnvironmentalOpen in IMG/M
3300018023Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100EnvironmentalOpen in IMG/M
3300018042Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018062Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018090Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019240Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019888Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2EnvironmentalOpen in IMG/M
3300021088Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300025500Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40 (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027652Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027895Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027908Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300028759Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_1EnvironmentalOpen in IMG/M
3300028871Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_1EnvironmentalOpen in IMG/M
3300029943I_Palsa_N3 coassemblyEnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300030646Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_2EnvironmentalOpen in IMG/M
3300030659Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)EnvironmentalOpen in IMG/M
3300030707Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)EnvironmentalOpen in IMG/M
3300030906Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_3EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032893Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1EnvironmentalOpen in IMG/M
3300033807Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10EnvironmentalOpen in IMG/M
3300033822Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9EnvironmentalOpen in IMG/M
3300033982Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB22AY SIP fractionEnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
AP72_2010_repI_A001DRAFT_100583613300000893Forest SoilDSNKPSLRRTANPSDKTDEKKSDDDDRPTLKRRDDSN*
JGIcombinedJ26739_10023949813300002245Forest SoilDGSKPSLRRTSASSDSKNGDSKSDSDDDRPTLKRRDDSSN*
JGIcombinedJ26739_10046381013300002245Forest SoilKDANKPSLRRTSTSSSDGNGNANGQSDDDRPTLKRRDDSSSN*
Ga0062389_10241203713300004092Bog Forest SoilKDVNKPTLRRTSSADQSGKDAGSTDDGHPTLKRRDDTSN*
Ga0062389_10421982913300004092Bog Forest SoilRKMVDHKDAGKPSLRRASSTDKNGTDDKTSDDDHPTLKRRDDSSSN*
Ga0066672_1019183113300005167SoilGSRPSLRRTSTSDKSSGSDKNGNDDDRPTLKRRDDNPNQSQ*
Ga0065707_1024261313300005295Switchgrass RhizosphereKESGKPSLRRTTTSDKTGSDKDGKDKDDDRPTLKRREDQ*
Ga0070708_10058324113300005445Corn, Switchgrass And Miscanthus RhizosphereEKDSNKPSLRRTANPTDKSSDSKSDDDRPTLKRRDDSSN*
Ga0070707_10030158013300005468Corn, Switchgrass And Miscanthus RhizosphereRHKVIEEKDGSRPSLRRTSSTDKTSSGSDKSDDDRPTLKRREDKPDQN*
Ga0066697_1030212033300005540SoilESGKPSLRRTASKDKTTSDKSADDDRPTLKRRDDQNQN*
Ga0070762_1108404013300005602SoilKDGKKPSLRRTSTADKSGSDPNSTDDGRPTLKRRDDSN*
Ga0068864_10096612733300005618Switchgrass RhizosphereLDKNEDKNRPSLRRTSTTDKNGSDDKTNDDDRPTLKRRDDSSSN*
Ga0068863_10022559413300005841Switchgrass RhizosphereEKDTNKPSLRRTSSTDKSGKDTKSGDDDRPTLKRREDQN*
Ga0068862_10236264813300005844Switchgrass RhizosphereKEDSNKPSLRRTSSTDKNGTDDEGNDDDRPTLKRRDDSN*
Ga0075017_10005905253300006059WatershedsHKILDKKDDGKKPSLRRTSTTDKNGSDSKGNDDDRPTLKRRDDSSN*
Ga0075019_1099977323300006086WatershedsRPSLRRTANPSDTTKDDSKQDDDRPTLKRRDDSSN*
Ga0075030_10019639033300006162WatershedsDEKDSSKPSLRRTSNSSDKSEDGKKDDDDRPTLKRRDDSN*
Ga0075030_10053616313300006162WatershedsTKPSLRRTSNSTDKTGDTKSDDDRPTLKRRDDSSN*
Ga0070765_10061539613300006176SoilKVIEEKDGSKPSLRRTSTTDKTGGTNTNSDDDRPTLKRRDDDSGQNNPSPTNPSQN*
Ga0066665_1135402713300006796SoilNKPSLRRTSSPDKSGKDTKNDDDRPTLKRRPDSQDQ*
Ga0099829_1100465213300009038Vadose Zone SoilRPSLRRTSSSDKTSTGSDKSDDDRPTLKRRDDKPDQN*
Ga0105247_1021815413300009101Switchgrass RhizosphereDKNRPSLRRTSTTDKNGSDDKTNDDDRPTLKRRDDSSSN*
Ga0105241_1004915913300009174Corn RhizosphereQEKKEDPNKPSLRRTSSADKSGKDDKGNDDDRPTLKRRDDNN*
Ga0116128_108899333300009518PeatlandGNKPSLRRTSTSDKTSSTDKSGDDDDRPTLKRRDDNPNQNQQ*
Ga0116222_145884013300009521Peatlands SoilIDQKDSSKPSLRRTSNPSDTSNDGKSDDDRPTLKRRDDSSN*
Ga0116111_104071113300009616PeatlandEKDGSKPSLRRTSTSDKSAGTDKSGSDDDRPTLKRRDDSQNQNQQ*
Ga0116102_102625733300009632PeatlandEKDGSKPSLRRTSTSDKTSSTDKSGDDDDRPTLKRRDDNPNQN*
Ga0116118_101204313300009637PeatlandKIIEEKDGSKPSLRRTSTSDKTSSTDKSGDDDRPTLKRRDDNPNQN*
Ga0116216_1092889513300009698Peatlands SoilDKDSSKPSLRRTSNPSDKSGDTKSDDDRPTLKRRDDSSN*
Ga0116227_1069464013300009709Host-AssociatedDSNRPSLRRASTADKSGSDKSGNSDDDRPTLKRRDDTPDQTQQQ*
Ga0116101_103223313300009759PeatlandKPSLRRTSTSGSDKTGDSTNDDDRPTLKRRDDSSSN*
Ga0116134_105544713300009764PeatlandNKPSLRRTSAGSDGDTGNGQSDDDRPTLKRRDGSSD*
Ga0116219_1051408513300009824Peatlands SoilPSLRRASSTDKNGTDDKSSDDDRPTLKRRDDGSN*
Ga0126373_1291033513300010048Tropical Forest SoilVVDEKDNNKPSLRRTSSADKSGKDTSNGDDRPTLKRRGDQQ*
Ga0126370_1251959813300010358Tropical Forest SoilPSLRRASTNDKSGKGGDDKSADDDRPTLKRREDKQD*
Ga0134128_1013849813300010373Terrestrial SoilNEDKNRPSLRRTSTTDKNGSDDKTNDDDRPTLKRRDDSSSN*
Ga0126381_10154187113300010376Tropical Forest SoilKPSLRRTSNTSDKSSDGKNDDDRPTLKRRDDSNDSN*
Ga0126381_10333134523300010376Tropical Forest SoilLLDKNDANKPSLRRTTNTSDKTDDKKDDEHPTLKRRDDSN*
Ga0126381_10409052613300010376Tropical Forest SoilILDQKDSNRPSLRRTANPSDTTKDDKDKQDDDRPTLKRRDDSPN*
Ga0136449_10107022023300010379Peatlands SoilANKPSLRRTANSGDNTGDQKSDDDRPTLKRRDDSSN*
Ga0138568_102468013300011080Peatlands SoilIEEKDGSKPSLRRTSTSDKTSSTDKSGDDDDRPTLKRRDDNPNQN*
Ga0137392_1040903243300011269Vadose Zone SoilEGGKPSLRRTSSADKSGKDDKDKDDDRPTLKRRDDSNNN*
Ga0137393_1010335413300011271Vadose Zone SoilNKPSLRRTSTTTDDKTGDSKDDDRPTLKRRDDSSN*
Ga0137393_1023779523300011271Vadose Zone SoilTNKASLRRTSAGDKHGQDTKDDDDRPTLKRRDDEN*
Ga0137383_1108356213300012199Vadose Zone SoilKVVDEKESGKPSLRRTASKDKTTSDKGADDDRPTLKRRDDQNQN*
Ga0137381_1132456123300012207Vadose Zone SoilSKPSLRRTSTTDKSSDKNGDKGGDDDRPTLHRRDD*
Ga0137361_1126702723300012362Vadose Zone SoilTKPSLRRTSSSDKSGKDDKTDDDRPTLKRRDDTKQN*
Ga0137390_1042076833300012363Vadose Zone SoilGSRPSLRRTSSTDKSTGTDKSDDERPTLKRRADKPDKN*
Ga0137390_1130563413300012363Vadose Zone SoilSLRRTSTPDKNGSDDKTGDDGRPTLKRRDDSSSN*
Ga0157352_101471133300012519Unplanted SoilGTKPSLRRTSTADKTSDKNGDKGGDDDRPTLHRRDD*
Ga0137395_1052337333300012917Vadose Zone SoilDANKPSLRRTSTTTDDKTGDSKDDDRPTLKRRDDSSN*
Ga0126369_1266917013300012971Tropical Forest SoilEKDSNKPSLRRTSNTSDKSDEKKSDDDDRPTLKRRDDSN*
Ga0157373_1042736213300013100Corn RhizosphereKNEDKNRPSLRRTSTTDKNGSDDKTNDDDRPTLKRRDDSSSN*
Ga0157369_1090599913300013105Corn RhizosphereLDEKDANKPSLRRTSNTSDKSDDSKKDDDRPTLKRRDD*
Ga0157378_1050605523300013297Miscanthus RhizosphereEYRLMIVHENDTNKQSLRRTSSTDKSGKDTKSGDYDRPTLKRREDQN*
Ga0163163_1127325413300014325Switchgrass RhizosphereKPSLRRTTTSDKTGSDKDGKDKDDDRPTLKRREDQ*
Ga0182018_1029671413300014489PalsaDGSKPSLRRTSTSDKTGTSGTDSSDDDRPTLKRRDDSPDQTQQQQQ*
Ga0182013_1009281113300014492BogHKVIEEKDSSKPSLRRTSTSDKTSGTDKSGDDDRPTLKRRDDSPSQN*
Ga0182030_1060996033300014838BogSLRRATSSQGDSTNPDDNTKSADDRPTLKRRDDQ*
Ga0182041_1127658913300016294SoilKDSAKPSLRRTSNTTDKSDDKKDDDDRPTLKRREDSN
Ga0182038_1184342623300016445SoilDSAKPSLRRTSNPGDKSDDKKDDDDRPTLKRRDDSN
Ga0181505_1052517013300016750PeatlandIDQKDSNKPSLRRTSNTSDTSSDGKSDDDRPTLKRRDDSSN
Ga0187802_1013707723300017822Freshwater SedimentRDENKPSLRRTSAPSDDKTSDGKTDDDRPTLKRRDDSSN
Ga0187802_1033213923300017822Freshwater SedimentKKPSLRRASTTDKNGSDDKGTSSDDDHPTLKRRDDSNNN
Ga0187801_1032219513300017933Freshwater SedimentLDQKDSSKPSLRRTSNPSNKSEDGKTSDDDRPTLKRRDDTN
Ga0187801_1035393613300017933Freshwater SedimentNKPSLRRTSNPTDSTGDSTKSDDDRPTLKRRDDSSN
Ga0187819_1011408443300017943Freshwater SedimentNKPTLRRTSSADQSGKDQGNTDDGHPTLKRRDDSNNN
Ga0187879_1066856023300017946PeatlandDGNKPSLRRTSTSDKTSGTDSSSNDDDRPTLKRRDDNPNQTQQQ
Ga0187847_1004366413300017948PeatlandQRDENKPSLRRTSTSSGDDKSGTNGDDDRPTLKRRDDSSN
Ga0187783_1108767323300017970Tropical PeatlandDENKPSLRRTASSGGDNGSGSSNDDDRPTLKRRDDSSNN
Ga0187781_1062571133300017972Tropical PeatlandKPSLRRTSNTSDKSSDGKNDDDRPTLKRRDDSNDSN
Ga0187780_1095614023300017973Tropical PeatlandDQKEGNKPTLRRASSADKSGKDQGSTDDEHPTLKRRDDNN
Ga0187782_1034484413300017975Tropical PeatlandNKPSLRRTSNPNDNSGDSKQDDDRPTLKRRDDSSN
Ga0181520_1065042713300017988BogKDSAPSLRRTSKPADKSTSGDSKNDDDRPTLKRRDD
Ga0187816_1006451013300017995Freshwater SedimentLDQRDENKPSLRRTSAPSDDKTSDGKTDDDRPTLKRRDDSSN
Ga0187865_132067013300018004PeatlandLDQRDENKPSLRRTSASGDSKSGTTNPDDDRPTLKRRDDSSN
Ga0187889_1004695113300018023PeatlandKDGNKPSLRRTSTSDKTSSTDKSGDDDDRPTLKRRDDNPNQNQQ
Ga0187871_1063275813300018042PeatlandHKVIDEKDSNKPSLRRTSNPSDSSGDGKTDDDRPTLKRRPSDDQ
Ga0187766_1037681713300018058Tropical PeatlandEKDANKPSLRRTSNPNDKTGTDQGNKDDDRPTLKRRDDSSN
Ga0187784_1153190213300018062Tropical PeatlandLDQKDSNKPSLRRTSNPNDNSGDQKQDDDRPTLKRRDDSSN
Ga0187772_1038067113300018085Tropical PeatlandNKPSLRRTSNPNDNSGDQKQDDDRPTLKRRDDSSN
Ga0187770_1109630013300018090Tropical PeatlandNKPSLRRTSTSSGDNTGNSQGDDDRPTLKRRDDSSN
Ga0066662_1009685323300018468Grasslands SoilKKGNKPSLRRTSSPDKSGKDTKNDDDRPTLKRRPDSQDQ
Ga0181510_126494313300019240PeatlandHKVNDEKDASRPSLRRASNTDKTGGGTDSSSDDDRPTLKRRDDSPDQTTQQQQ
Ga0193751_107447233300019888SoilRPSLRRTSTSDKSSGSDKNGNDDDRPTLKRRDDNPNQSQ
Ga0210404_1011594513300021088SoilKDANKPSLRRTSTSTDKSGDNKSDDDRPTLKRRDDSN
Ga0210400_1039499313300021170SoilIDNKDTGKPSLRRTSSTSNTGKDGTSSDDDKPTLKRRDDSN
Ga0210405_1129547213300021171SoilGNKPSLRRTSTADKSGDKNGDKGGDDDRPTLHRRDD
Ga0210388_1053713723300021181SoilDEKDANKPSLRRTSNTSDKSSDGKSDDDRPTLKRRDDSSN
Ga0210402_1075617613300021478SoilKGGTKPSLRRTSTADKPSDKNGDKGGDDDRPTLHRRDD
Ga0210409_1126052523300021559SoilKPSLRRTASTDKSGDKNGDKTDDDRPTLHRRDDFK
Ga0208686_103693733300025500PeatlandANKPSLRRTSAGSDGDTGNGQSDDDRPTLKRRDGSSD
Ga0207699_1148840913300025906Corn, Switchgrass And Miscanthus RhizosphereKIQEKKEDPNKPSLRRTSSADKSGKDDKGNDDDRPTLKRRDDNN
Ga0207671_1063634723300025914Corn RhizosphereDANKPSLRRTSNTSDKSDDSKKDDDRPTLKRRDDSN
Ga0207646_1174971823300025922Corn, Switchgrass And Miscanthus RhizosphereKESGKPSLRRTSSADKTNGKDDKDKDDDRPTLKRRDDSNNN
Ga0207709_1067606613300025935Miscanthus RhizosphereDNNKPSLRRTTTSDKTSTDKDGKDKDDDRPTLKRREDQN
Ga0207668_1039995823300025972Switchgrass RhizospherePSLRRTTTSDKTSTDKDGKDKDDDRPTLKRREDQN
Ga0207702_1097177033300026078Corn RhizosphereKNRPSLRRTSTPDKNGSDDKTGNDDDRPTLKRRDDSSSN
Ga0209007_102186623300027652Forest SoilDQKDANKPSLRRTSAGSDGNTGNGQTDDDRPTLKRRDDSSSN
Ga0209388_121831623300027655Vadose Zone SoilEKDGSRPSLRRTSSSDKTSTGSDKSDDDRPTLKRREDKPDQN
Ga0209180_1005198313300027846Vadose Zone SoilVREEKDGSRPSLRRTSSTDKSTGTDKSDDERPTLKRRDDKPDQN
Ga0209180_1021702233300027846Vadose Zone SoilRHKVIEEKDGSRPSLRRTSSSDKTSSGSDKSDDDRPTLKRREDKPDQN
Ga0209701_1005911913300027862Vadose Zone SoilILDKKDDGKKPSLRRTSTPDKNGSDSKGNDDDRPTLKRRDDSSN
Ga0209283_1025100413300027875Vadose Zone SoilIENRHKVLEEKDGSRPSLRRTSSTDKSTGTDKSDDERPTLKRRDDKPDQN
Ga0209624_1029110913300027895Forest SoilPSLRRTSAGSSDGNNGSGQTDDDRPTLKRREDSSN
Ga0209488_1123709513300027903Vadose Zone SoilKVIEEKDGSRPSLRRTSSTDKSSTGSDKSDDDRPTLKRREDKPDQN
Ga0209006_1010699823300027908Forest SoilWTPLDEKDGNKPSLRRTSNSSDTSDKSDTKSDDDRPTLKRRDDSN
Ga0209006_1037260313300027908Forest SoilSNKPSLRRTSNTSDTSSTDKKDDDRPTLKRRDDSSSN
Ga0209698_1067863323300027911WatershedsTKPSLRRTSNSTDKTGDTKSDDDRPTLKRRDDSSN
Ga0302224_1011826113300028759PalsaKPSLRRTSNTSDSSNTGGDQQQQGDDRPTLKRRDDSSN
Ga0302230_1021506013300028871PalsaLDQKDANKPSLRRTSTTDKSGNTTDNSDDDRPTLKRRDDSPDQSQTQQQ
Ga0311340_1037052113300029943PalsaKDANKPSLRRTSASTDSSGNDKSDDDRPTLKRRDDSSN
Ga0311356_1046789423300030617PalsaGNKPSLRRTSNTDSKSGNTQTDDDRPTLKRRDDSSN
Ga0302316_1029401723300030646PalsaENKPSLRRTSTSGSDKTGDSTDDDRPTLKRRDDSSSN
Ga0316363_1038942513300030659Peatlands SoilASKPSLRRASSTDKNGTDDKSSDDDRPTLKRRDDGSN
Ga0310038_1021413813300030707Peatlands SoilEKDTNKPSLRRTSNTTDKSGDTKSDDDRPTLKRRDDSSN
Ga0302314_1088706823300030906PalsaDSNKPSLRRTSNTSDNSGSTTQSDDDRPTLKRRDDSSN
Ga0170834_10460947813300031057Forest SoilGSRPSLRRTSTSDKSSGSDKNGNDDDRPTLKRRDDNPNQSQ
Ga0170818_10821481413300031474Forest SoilKDANKPSLRRTSNTSDKSDDKKDDERPTLKRRDDSN
Ga0318534_1048736123300031544SoilQKDSAKPSLRRTSNPTDKSDDGKKDDDDRPTLKRREDSN
Ga0310686_10021565423300031708SoilVIDDKDSSKPSLRRTSNPSDTSTDGKSDDDRPTLKRRDDSSN
Ga0308175_10049125123300031938SoilDEKDANKPSLRRTSNTSDKSDDSKKDDDRPTLKRRDDSN
Ga0310916_1070220223300031942SoilLDQKDSAKPSLRRTSNTGDKSDDKKDDDDRPTLKRRDDSN
Ga0306926_1018883813300031954SoilLDQKDSAKPSLRRTSNTTDKSDDKKDDDDRPTLKRREDSN
Ga0307479_1126009723300031962Hardwood Forest SoilDSNRPSLRRTSNTTDKSGDQKTDDDRPTLKRRDDSN
Ga0307479_1167820213300031962Hardwood Forest SoilKDANKPSLRRTANTTDKSGDTKSDDDRPTLKRRDDSN
Ga0307479_1169494113300031962Hardwood Forest SoilDSSKPSLRRTANTTDKSGDTKSDDDRPTLKRRDDSN
Ga0311301_10045714103300032160Peatlands SoilDKDSSKPSLRRTSNPSDKSGDTKSDDDRPTLKRRDDSSN
Ga0311301_1128203633300032160Peatlands SoilVIEEKDGNKPSLRRTSTSDKTSGTDKSGDDDDRPTLKRRDDSQGQTQQQ
Ga0307470_1050195213300032174Hardwood Forest SoilKVLDQKDGNKPSLRRTSASSDDKSGDSKTDDDRPTLKRRDDSSN
Ga0307471_10278055323300032180Hardwood Forest SoilKEGSKPSLRRASTSDKSGKDDKTDDDRPTLKRRDDTKQN
Ga0307471_10420236323300032180Hardwood Forest SoilETNRPSLRRASAGDNNGQDNKNDDDRPTLKRRADQN
Ga0307472_10192990613300032205Hardwood Forest SoilDDGKKPSLRRTSTPDKNGSDDKTSDDGRPTLKRRDDSSN
Ga0335078_1018436253300032805SoilKDGNKPSLRRASNPNDNSGDQKQDDDRPTLKRREDSN
Ga0335069_1217830323300032893SoilKPSLRRTSSTDKTSQDGKTSDDDHPTLKRRDDNNN
Ga0314866_056239_539_6523300033807PeatlandEGNKPTLRRASSADKSGKDQGSTDDEHPTLKRRDDNN
Ga0334828_039847_1218_13433300033822SoilKDGSKPSLRRTSSTDKTSTGTDKSDDDRPTLKRRDDTPNQN
Ga0371487_0507973_362_5053300033982Peat SoilHKVIEEKDSSKPSLRRTSTSDKTSGTDTSSDDDRPTLKRRDDNPNQN

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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