NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F055906

Metagenome / Metatranscriptome Family F055906

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F055906
Family Type Metagenome / Metatranscriptome
Number of Sequences 138
Average Sequence Length 62 residues
Representative Sequence VALAEHVGHTVTATGVVSNAKMHNMKEDAKEAAKDSGMKKSDGEHGHLKVTEVKMVSDSCK
Number of Associated Samples 117
Number of Associated Scaffolds 138

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 10.95 %
% of genes near scaffold ends (potentially truncated) 80.43 %
% of genes from short scaffolds (< 2000 bps) 86.23 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.26

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (64.493 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(31.884 % of family members)
Environment Ontology (ENVO) Unclassified
(49.275 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(57.246 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 20.22%    β-sheet: 20.22%    Coil/Unstructured: 59.55%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.26
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 138 Family Scaffolds
PF04794YdjC 5.07
PF13548DUF4126 4.35
PF104171-cysPrx_C 2.90
PF04055Radical_SAM 2.17
PF00072Response_reg 1.45
PF00196GerE 1.45
PF11752DUF3309 1.45
PF07238PilZ 1.45
PF00313CSD 1.45
PF13519VWA_2 0.72
PF07859Abhydrolase_3 0.72
PF12732YtxH 0.72
PF00027cNMP_binding 0.72
PF03459TOBE 0.72
PF04226Transgly_assoc 0.72
PF13701DDE_Tnp_1_4 0.72
PF08308PEGA 0.72
PF00722Glyco_hydro_16 0.72
PF05974DUF892 0.72
PF06348DUF1059 0.72
PF04964Flp_Fap 0.72
PF01610DDE_Tnp_ISL3 0.72
PF07730HisKA_3 0.72
PF01103Omp85 0.72
PF01797Y1_Tnp 0.72
PF00326Peptidase_S9 0.72
PF12867DinB_2 0.72
PF06262Zincin_1 0.72

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 138 Family Scaffolds
COG3394Chitooligosaccharide deacetylase ChbG, YdjC/CelG familyCarbohydrate transport and metabolism [G] 5.07
COG0657Acetyl esterase/lipaseLipid transport and metabolism [I] 0.72
COG1943REP element-mobilizing transposase RayTMobilome: prophages, transposons [X] 0.72
COG2261Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein familyGeneral function prediction only [R] 0.72
COG2273Beta-glucanase, GH16 familyCarbohydrate transport and metabolism [G] 0.72
COG3464TransposaseMobilome: prophages, transposons [X] 0.72
COG3685Ferritin-like metal-binding protein YciEInorganic ion transport and metabolism [P] 0.72
COG3824Predicted Zn-dependent protease, minimal metalloprotease (MMP)-like domainPosttranslational modification, protein turnover, chaperones [O] 0.72
COG3847Flp pilus assembly protein, pilin FlpExtracellular structures [W] 0.72
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 0.72
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.72
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.72
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 0.72

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms64.49 %
UnclassifiedrootN/A35.51 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001545|JGI12630J15595_10114047All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium533Open in IMG/M
3300004117|Ga0058893_1336279Not Available609Open in IMG/M
3300004139|Ga0058897_10030321Not Available639Open in IMG/M
3300004479|Ga0062595_100025327All Organisms → cellular organisms → Bacteria2337Open in IMG/M
3300004631|Ga0058899_10203199All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300005184|Ga0066671_10624426All Organisms → cellular organisms → Bacteria700Open in IMG/M
3300005439|Ga0070711_100537431All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium968Open in IMG/M
3300005450|Ga0066682_10446840All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300005467|Ga0070706_100013159All Organisms → cellular organisms → Bacteria7655Open in IMG/M
3300005468|Ga0070707_100754958Not Available936Open in IMG/M
3300005468|Ga0070707_101069469Not Available773Open in IMG/M
3300005530|Ga0070679_100344858All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1437Open in IMG/M
3300005539|Ga0068853_102438831Not Available506Open in IMG/M
3300005546|Ga0070696_101924329Not Available512Open in IMG/M
3300005548|Ga0070665_101231909All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium759Open in IMG/M
3300005921|Ga0070766_11219842All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium521Open in IMG/M
3300006028|Ga0070717_10754835All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium884Open in IMG/M
3300006031|Ga0066651_10488291All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium652Open in IMG/M
3300006102|Ga0075015_100941093Not Available526Open in IMG/M
3300006175|Ga0070712_101889028All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium523Open in IMG/M
3300006755|Ga0079222_12212352All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium547Open in IMG/M
3300006800|Ga0066660_11290371Not Available571Open in IMG/M
3300006804|Ga0079221_11510232Not Available540Open in IMG/M
3300006881|Ga0068865_100575944All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300007258|Ga0099793_10354266Not Available718Open in IMG/M
3300009038|Ga0099829_11427945All Organisms → cellular organisms → Bacteria572Open in IMG/M
3300009088|Ga0099830_10322913All Organisms → cellular organisms → Bacteria1236Open in IMG/M
3300009088|Ga0099830_10654997All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300009090|Ga0099827_10009117All Organisms → cellular organisms → Bacteria → Acidobacteria6279Open in IMG/M
3300009093|Ga0105240_10138924All Organisms → cellular organisms → Bacteria2907Open in IMG/M
3300009093|Ga0105240_11342734All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium753Open in IMG/M
3300009093|Ga0105240_11919530All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans616Open in IMG/M
3300009098|Ga0105245_11770496Not Available670Open in IMG/M
3300009143|Ga0099792_10598707Not Available702Open in IMG/M
3300009176|Ga0105242_10024026All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4811Open in IMG/M
3300009176|Ga0105242_12581016All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300009551|Ga0105238_11336806All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium743Open in IMG/M
3300010335|Ga0134063_10284745All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium792Open in IMG/M
3300010360|Ga0126372_11309992All Organisms → cellular organisms → Bacteria753Open in IMG/M
3300010366|Ga0126379_12133974Not Available662Open in IMG/M
3300010373|Ga0134128_12943081All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300010400|Ga0134122_11591086Not Available677Open in IMG/M
3300011120|Ga0150983_15977519All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium610Open in IMG/M
3300011269|Ga0137392_10223020All Organisms → cellular organisms → Bacteria → Acidobacteria1547Open in IMG/M
3300011270|Ga0137391_10741773All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium813Open in IMG/M
3300011271|Ga0137393_10639896All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium912Open in IMG/M
3300012096|Ga0137389_10086765Not Available2459Open in IMG/M
3300012096|Ga0137389_10169196All Organisms → cellular organisms → Bacteria1802Open in IMG/M
3300012096|Ga0137389_10245320Not Available1504Open in IMG/M
3300012189|Ga0137388_11700667All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium565Open in IMG/M
3300012200|Ga0137382_11044774Not Available585Open in IMG/M
3300012202|Ga0137363_10203427All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1590Open in IMG/M
3300012205|Ga0137362_10233940All Organisms → cellular organisms → Bacteria → Acidobacteria1585Open in IMG/M
3300012206|Ga0137380_10887539All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium766Open in IMG/M
3300012206|Ga0137380_11454690All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium570Open in IMG/M
3300012207|Ga0137381_10408689All Organisms → cellular organisms → Bacteria1184Open in IMG/M
3300012212|Ga0150985_108874106All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium506Open in IMG/M
3300012356|Ga0137371_10909397All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium669Open in IMG/M
3300012356|Ga0137371_10952035Not Available652Open in IMG/M
3300012398|Ga0134051_1225875Not Available522Open in IMG/M
3300012582|Ga0137358_10712350Not Available671Open in IMG/M
3300012683|Ga0137398_11122254All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300012685|Ga0137397_11161151All Organisms → cellular organisms → Bacteria558Open in IMG/M
3300012923|Ga0137359_10284418Not Available1474Open in IMG/M
3300012924|Ga0137413_11733701Not Available514Open in IMG/M
3300012925|Ga0137419_10099322Not Available2011Open in IMG/M
3300012927|Ga0137416_10039522All Organisms → cellular organisms → Bacteria3224Open in IMG/M
3300012927|Ga0137416_10181854All Organisms → cellular organisms → Bacteria1673Open in IMG/M
3300012929|Ga0137404_10783717All Organisms → cellular organisms → Bacteria → Acidobacteria865Open in IMG/M
3300012929|Ga0137404_10900885All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium806Open in IMG/M
3300012930|Ga0137407_10479951All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1159Open in IMG/M
3300012944|Ga0137410_11056420Not Available693Open in IMG/M
3300012957|Ga0164303_11336848Not Available532Open in IMG/M
3300012957|Ga0164303_11367528Not Available528Open in IMG/M
3300012961|Ga0164302_10455057Not Available890Open in IMG/M
3300012975|Ga0134110_10054032All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1586Open in IMG/M
3300012984|Ga0164309_10735196All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300013296|Ga0157374_10049655All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3897Open in IMG/M
3300013296|Ga0157374_10498613All Organisms → cellular organisms → Bacteria1222Open in IMG/M
3300013296|Ga0157374_10849265All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium930Open in IMG/M
3300013764|Ga0120111_1163769Not Available502Open in IMG/M
3300014054|Ga0120135_1087596Not Available541Open in IMG/M
3300014157|Ga0134078_10011819All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2580Open in IMG/M
3300014745|Ga0157377_11410839All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium550Open in IMG/M
3300014968|Ga0157379_10543625All Organisms → cellular organisms → Bacteria → Acidobacteria1080Open in IMG/M
3300014969|Ga0157376_10644023All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1059Open in IMG/M
3300015053|Ga0137405_1276818All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1299Open in IMG/M
3300015242|Ga0137412_10400364Not Available1062Open in IMG/M
3300015359|Ga0134085_10170286All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes930Open in IMG/M
3300015371|Ga0132258_11753412All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1565Open in IMG/M
3300015374|Ga0132255_103491043All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300018433|Ga0066667_12353835All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium500Open in IMG/M
3300018468|Ga0066662_11843838All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium633Open in IMG/M
3300019878|Ga0193715_1091385All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300020004|Ga0193755_1091615All Organisms → cellular organisms → Bacteria → Acidobacteria968Open in IMG/M
3300020004|Ga0193755_1094281Not Available951Open in IMG/M
3300020006|Ga0193735_1145352Not Available621Open in IMG/M
3300020579|Ga0210407_10508053All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium942Open in IMG/M
3300021086|Ga0179596_10369165Not Available722Open in IMG/M
3300021170|Ga0210400_10279847All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1367Open in IMG/M
3300021432|Ga0210384_10089068Not Available2772Open in IMG/M
3300021432|Ga0210384_11730495Not Available531Open in IMG/M
3300021478|Ga0210402_11245820Not Available671Open in IMG/M
3300021559|Ga0210409_11701352All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300022507|Ga0222729_1073284All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300022726|Ga0242654_10433827All Organisms → cellular organisms → Bacteria510Open in IMG/M
3300025619|Ga0207926_1111970Not Available652Open in IMG/M
3300025910|Ga0207684_10073076All Organisms → cellular organisms → Bacteria → Acidobacteria2912Open in IMG/M
3300025916|Ga0207663_11000308All Organisms → cellular organisms → Bacteria → Acidobacteria671Open in IMG/M
3300025921|Ga0207652_11784500Not Available520Open in IMG/M
3300025922|Ga0207646_10573249All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1014Open in IMG/M
3300025927|Ga0207687_11694939Not Available542Open in IMG/M
3300025934|Ga0207686_10652921Not Available832Open in IMG/M
3300025939|Ga0207665_10822951All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium734Open in IMG/M
3300025942|Ga0207689_11088185Not Available674Open in IMG/M
3300026285|Ga0209438_1070585Not Available1140Open in IMG/M
3300026532|Ga0209160_1178967All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium889Open in IMG/M
3300026532|Ga0209160_1179671All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium885Open in IMG/M
3300027603|Ga0209331_1157086Not Available537Open in IMG/M
3300027610|Ga0209528_1069850All Organisms → cellular organisms → Bacteria → Acidobacteria777Open in IMG/M
3300027633|Ga0208988_1052886Not Available1033Open in IMG/M
3300027651|Ga0209217_1093196All Organisms → cellular organisms → Bacteria866Open in IMG/M
3300027846|Ga0209180_10318032Not Available890Open in IMG/M
3300027862|Ga0209701_10004796All Organisms → cellular organisms → Bacteria → Acidobacteria8899Open in IMG/M
3300027862|Ga0209701_10281180All Organisms → cellular organisms → Bacteria962Open in IMG/M
3300027875|Ga0209283_10032406All Organisms → cellular organisms → Bacteria → Acidobacteria3268Open in IMG/M
3300027903|Ga0209488_10067541All Organisms → cellular organisms → Bacteria → Acidobacteria2648Open in IMG/M
3300028047|Ga0209526_10443883All Organisms → cellular organisms → Bacteria854Open in IMG/M
3300028536|Ga0137415_10001744All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium21601Open in IMG/M
3300028536|Ga0137415_10061244All Organisms → cellular organisms → Bacteria3629Open in IMG/M
3300028536|Ga0137415_10075262All Organisms → cellular organisms → Bacteria → Acidobacteria3236Open in IMG/M
3300030019|Ga0311348_10299600All Organisms → cellular organisms → Bacteria1199Open in IMG/M
3300031715|Ga0307476_11146722All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium570Open in IMG/M
3300031716|Ga0310813_11327648Not Available665Open in IMG/M
3300032180|Ga0307471_103611343Not Available547Open in IMG/M
3300032180|Ga0307471_104158219Not Available511Open in IMG/M
3300032892|Ga0335081_11046335All Organisms → cellular organisms → Bacteria946Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil31.88%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil7.25%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.97%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.52%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.35%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.62%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.62%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.90%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.17%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.17%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.45%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.45%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.45%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.45%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.45%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.45%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.45%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.72%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.72%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.72%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.72%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen0.72%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.72%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.72%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001545Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1EnvironmentalOpen in IMG/M
3300004117Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF222 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004139Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005184Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120EnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012398Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013764Permafrost microbial communities from Nunavut, Canada - A28_35cm_6MEnvironmentalOpen in IMG/M
3300014054Permafrost microbial communities from Nunavut, Canada - A34_5cm_12MEnvironmentalOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300022507Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-27-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022726Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025619Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 deep-072012 (SPAdes)EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025916Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300027603Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027610Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027633Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300030019II_Fen_E2 coassemblyEnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12630J15595_1011404723300001545Forest SoilDGSTWEIRSSRVVLAEHVGHTVTATGVVSNAKMHNLKEDAKEAAKDSGMKKSDAEHGHLKVTEVKMISDSCQK*
Ga0058893_133627923300004117Forest SoilVSLSDHVGHTVTATGVVSNAKLHNLKEDAKETAKDTGVTKDDKEHGHLTITAIKMVSESCKY*
Ga0058897_1003032123300004139Forest SoilRVSLSDHVGHTVTATGVVSNAKLHNLKEDAKDAAADTGVKKDNREHGHLTITSIRMVSESCRN*
Ga0062595_10002532753300004479SoilTWEVRSSKVALAEHVGHTVTATGVVSNAAMHNMKEDAKDAAKDSGATKTNDEHGHLKITAVKMVSDSCK*
Ga0058899_1020319913300004631Forest SoilAVDLSSHLGHTVEAKGVVTNAKMHNMKEDAKDMAKDSGVKKSDTEHGHLKVTSVRMVSDSCQK*
Ga0066671_1062442613300005184SoilGHEVSATGVVSHAKLHNMKEDAKDTAKDTGIKKSDREHGHLTITDVKMVGDTCSK*
Ga0070711_10053743123300005439Corn, Switchgrass And Miscanthus RhizosphereWEVRSSQVALAEHVGHTVTATGVVSNATMHNMKEDAKDAAKDSGAKKTNEEHGHMTVTQVKMVSESCQ*
Ga0066682_1044684033300005450SoilVRSSRVVLAKHVGHTITATGVVSHAKLHNMKEDTKEMAKDSGMKKSNAEHGHMKITEVKMVSDSCQK*
Ga0070706_10001315933300005467Corn, Switchgrass And Miscanthus RhizosphereVDLAEHLGHTVTATGVVSNAKMHNMKEDAKETAKASGMKKSNAEHGHMKITDVKMVSESCK*
Ga0070707_10075495813300005468Corn, Switchgrass And Miscanthus RhizosphereVRSSLVDLAEHLGHTVTATGVVSNAKMHNMKEDAKETAKASGMKKSNAEHGHMKITDVKMVSESCK*
Ga0070707_10106946913300005468Corn, Switchgrass And Miscanthus RhizosphereNDGSTWEVRSSKVALGEHVGHTVTPTGAVSNAKMHNMKEDAKDTVKDSGMKKSNAEHGHMTITDLKMVSESCNQ*
Ga0070679_10034485813300005530Corn RhizosphereVALADHVGHTVTATGVVSNAKMHNMKEDTKDAAKDSGMTKSNEEHGHLKVTDVKMVSDSCQQ*
Ga0068853_10243883113300005539Corn RhizosphereDRVALADHVGHTVTATGVVSNAAMHNMKEDTKDMAKDAGMKKSNTDHGHLKITDVKMVSDSCSK*
Ga0070696_10192432913300005546Corn, Switchgrass And Miscanthus RhizosphereDLAEHVGHTVTATGVVSNAAMHNMKEDAKDAAKDSGMKKDDSEHGHLKVTAVKMVSESCK
Ga0070665_10123190913300005548Switchgrass RhizosphereQSSKVALAEHVGHTVTATGVVSNATAHNLKEDAKDAAKDSGMTKANNEHGHLTVTEVKMVSESCQ*
Ga0070766_1121984213300005921SoilSSKVALAEHVGHTVNATGVVSNATAHNLKEDAKDAAKDSGMKKTNAEHGHLTVTEVKMVSDSCK*
Ga0070717_1075483513300006028Corn, Switchgrass And Miscanthus RhizosphereRSSKVALAEHVGHTVTATGVVSNAKMHNMKEDAKDAAKDSGMTKSDNEHGHLKVTDVKMVSESCQK*
Ga0066651_1048829123300006031SoilLAKHVGHTITATGVVSHAKLHNMKEDTKEMAKDTGMKKSDAEHGHMKITAVKMVSDSCQK
Ga0075015_10094109313300006102WatershedsSRVDLAEHVGHTVTATGVVSNAKMHNMKEDAKETAKDSGMKKSDAEHGHMTITDVKMVSESCK*
Ga0070712_10188902823300006175Corn, Switchgrass And Miscanthus RhizosphereTVTATGVVSNATAHNLKEDAKDAAKDSGMKKSNTEHGHLNVTDVKMVSDSCK*
Ga0079222_1221235213300006755Agricultural SoilLDLAEHVGHTVTATGVVSNPTAHNMKEDAKDAAKDSGMKKTNAEHGHMTVTDLKMVSESCQ*
Ga0066660_1129037113300006800SoilMITATGVVSNAKMHNMKEDVKEAAKDSGMKKSDAEHGHMKITSVKMVSDSCQK*
Ga0079221_1151023213300006804Agricultural SoilTKHVGHTITATGVVSHSKMHNLKEDAKQAGTDTGAMKQHAEHGHMEITHLKMVSDSCEK*
Ga0068865_10057594433300006881Miscanthus RhizosphereVALADHVGHTVTATGVVSNAKMHNMKEDAKDAAKDSGMTKSNEEHGHLKVTDVKMVSDSCQQ*
Ga0099793_1035426623300007258Vadose Zone SoilVDLAEHLGHTVTATGVVSNAKMHNMKEDAKETAKDSGMKKSNAEHGHMKITDVKMVSESCK*
Ga0099829_1142794513300009038Vadose Zone SoilHTVTATGVVSHAKMHNMKEDAKEAAKDSGMKKSDTDHGHLTITDVKMVSESCK*
Ga0099830_1032291323300009088Vadose Zone SoilVELAEHLGHTVTATGVVSNAKMHNMKEDAKETAKDSGMKKSNAEHGHMKITDVKMVSESCK*
Ga0099830_1065499713300009088Vadose Zone SoilSRVDLAEHLGHTVTATGVVSNAKMHNMKEDAKETAKDSGMKKSNTEHGHTKITDVKIVSESYK*
Ga0099827_10009117113300009090Vadose Zone SoilDLAEHLGHTVTATGVVSNAKMHNMKEDAKETAKDSGMKKSNAEHGHIKITDVKMVSESCK
Ga0105240_1013892423300009093Corn RhizosphereVKVTGAVSNAKAHNMKEDAKDAAKDSGMKKSNAEHGHLKPTDVQMIGDTCTK*
Ga0105240_1134273423300009093Corn RhizosphereEHMGHTVTATGVVSNAKLHNMKEDTQEAVKDSGITEKNKEHGHMKITDLKMVSDSCK*
Ga0105240_1191953013300009093Corn RhizosphereSTWEVRSDEVALADHIGHTVTATGVVSNAKLHNMKEDTQETVKDSGITEKNKEHGHLTITKVKMVSDSCK*
Ga0105245_1177049613300009098Miscanthus RhizosphereTVTATGVVSNAKMHNMKEDAKDAAKDSGMTKSDNEHGHLKVTDVKMVSESCQK*
Ga0099792_1059870723300009143Vadose Zone SoilVDLAEHLGHTVTATGVVSNAKMHNMKEDAKETAKDSGMKKSNAEQGHMKITDVKMVSESCK*
Ga0105242_1002402673300009176Miscanthus RhizosphereDHVGHTVTATGVVSNAKMHNMKEDAKDAAKDSGMTKSNEEHGHLKVTDVKMVSDSCQQ*
Ga0105242_1258101613300009176Miscanthus RhizosphereGSTWEVRSSKVALAEHVGHTVTATGVVSNATAHNMKEDAKDAAKDSGMKKTNEEHGHLTVTQVKMVSESCN*
Ga0105238_1133680613300009551Corn RhizosphereLAEHVGHTVTATGVVSNATAHNMKEDAKDAANDSGMMKANNEHGHLTVTEVKMVSESCQ*
Ga0134063_1028474513300010335Grasslands SoilGNDGSTWEVRSSRVVLAKHVGHTITATGVVSHAKLHNMKEDTKEMAKDSGMKKSNAEHGHMKITEVKMVSDSCQK*
Ga0126372_1130999213300010360Tropical Forest SoilNRVALAKHVGHTITATGVVSHAKMHNLKEDTKEMAKDTGMKKSDTEHGHMKITAVKMVNDSCKK*
Ga0126379_1213397423300010366Tropical Forest SoilPHVGHEVRISGAVSNAKMHNLKEDAKETAKDTGVKKSDTEHGHLKPTDLQMVSDTCKK*
Ga0134128_1294308113300010373Terrestrial SoilEVKVTGAVSNAKAHNMKEDVKDAAKDSGMKKSNAEHGHLKPTDVQMISDNCTK*
Ga0134122_1159108613300010400Terrestrial SoilWEVRSSKVALADHVGHTVTATGVVSSPTMHNMKEDAKDAAKDSGMTKSNDENGHLTVTQVKMVSESCQ*
Ga0150983_1597751913300011120Forest SoilLAEHVGHTVTATGVVSNATMHNMKEDAKDTAKDSGMKKSDSEHGHMKITDVKMVSESCK*
Ga0137392_1022302023300011269Vadose Zone SoilVDLAEHLGHTVTATGVVSNAKMHNMKEDAKETAKDSGMKKSNAEHGHIKITDVKMVSESCK*
Ga0137391_1074177313300011270Vadose Zone SoilVTATGVVSNATAHNIKEDAKDAAKDSGMKKTNDEHGHLTVTEVKMVSESCQ*
Ga0137393_1063989623300011271Vadose Zone SoilVLAKHVGHTITATGVVSHAKLHNMKEDTKEMAKDTGMKKSDTEHGHMKITAVKMVSDSCQK*
Ga0137389_1008676523300012096Vadose Zone SoilVALAEHVGHTVTATGVVSNAKMHNMKEDAKEAAKDSGMKKSDGEHGHLKVTEVKMVSDSCK*
Ga0137389_1016919623300012096Vadose Zone SoilVDLAEHLGHTVTATGVVSNAKMHNMKEDAKETAKDSGMKKSNAEHGQMKITDVKMVSESCK*
Ga0137389_1024532023300012096Vadose Zone SoilVDLAEHVGHTVTATGFGSNSTIHKMKEDAKETAKDSGMKKSDTEHGHMTITDVKMVSESCK*
Ga0137388_1170066713300012189Vadose Zone SoilALAEHVGHTVTATGAVSNATAHNMKEDAKDAAKDSGMKKDNSEHGHLTVTQVKMVSESCN
Ga0137382_1104477413300012200Vadose Zone SoilGSTWEVQSDKGALADHVGHTVTETGVVSHAKMHNMKEDAKETAKDSGIKKDATEHGHMTITDVKMVSESCK*
Ga0137363_1020342713300012202Vadose Zone SoilTATGVVSHQKLHNMKEDAKDAAADTGVKKDDAEHGHLKVTSIHSVGGSCRY*
Ga0137362_1023394023300012205Vadose Zone SoilVDLAEHLGHTVTATGVVSNAKMHNMKEDAKETAKDSGMKKSTTEHGHTKITDVKIVSESYK*
Ga0137380_1088753913300012206Vadose Zone SoilSTWEVRSSRVALAEHVGHTVTATGVVSNAKMHNMKEDAKQAAKDSGMKKSDAEHGHLTVTEIKMVSDSCK*
Ga0137380_1145469023300012206Vadose Zone SoilALAKHVGHTITATGVVSHVKLHNMKEDTKEMAKDTGMKKSDAEHGHMKITAVKMVSDSCQK*
Ga0137381_1040868913300012207Vadose Zone SoilHVGHTVTATGVVSHAKMHNMKEDAKEAAKDSGMKKSDTEHGHMTITDVKMVSESCK*
Ga0150985_10887410613300012212Avena Fatua RhizosphereQVTVTGAVSNAKMHNMKEDTKDAAKDSGMKKSNAEHGHLKPTEVQMISDSCTK*
Ga0137371_1090939723300012356Vadose Zone SoilHTITATGVVSHVKLHNMKEDTKEMAKDTGMKKSDAEHGHMKITAVKMVSDSCQK*
Ga0137371_1095203513300012356Vadose Zone SoilVVLAKHVGHTITATGVVSHAKLHNIKEDTKEMAKDSGMKKSNAEHGHMKITEVKMVSDSCQK*
Ga0134051_122587523300012398Grasslands SoilWEVRSSRVALAKHVGHTITATGVVSHAKLHNMKEDTKEMAKDTGMKKSDAEHGHMKITAVKMVTDSCQK*
Ga0137358_1071235013300012582Vadose Zone SoilRSDKVPLAEHVGHTVTATGVVSNAKMHNMKEDAKETAKDSGIKKDATEHGHMTITDVKMVSESCK*
Ga0137398_1112225413300012683Vadose Zone SoilVALAEDVGHTVTASGVVYNETEHNMKEDAKDAAKDSGMKKSDTEHGHMKITDVKMVSESCK*
Ga0137397_1116115113300012685Vadose Zone SoilVSLSKHVGQTVTATGVVSHQKLHNMKEDAKDAAADTGVKKDTAEHGHLKVTSIHSVGASCRY*
Ga0137359_1028441813300012923Vadose Zone SoilEVRSSRVDLAEHLGHTVTATGVVSNVKMHNMKEDAKETAKDSGMKKSNAEHGQVKITDVKMVSESYK*
Ga0137413_1173370113300012924Vadose Zone SoilVTLTPHVGHQVTVTGAVSNAKMHNMKEDAKDAAKDSGMKKSNAEHGHLKPTEVQMISDSCTK*
Ga0137419_1009932243300012925Vadose Zone SoilVDLAEHLGHTVTATGVVSNAKMHNMKEDAKETAKDSGMKKSNTEHGHMKITDVKIVSESCK*
Ga0137416_1003952273300012927Vadose Zone SoilEHVGHTVTATGVVSHAKMHNMKEDAKDAAKDSGMKKSDAEHGHLTVTEVKMVSDSCK*
Ga0137416_1018185423300012927Vadose Zone SoilVTATGVVSNATAHNIKEDAKDAAKDSGMKKTNDEHGHLTVMEVKMVSESCQ*
Ga0137404_1078371713300012929Vadose Zone SoilVDLAEHLGHTVTATGVVSNAKMHNMKEDAKETAKDSGMKKSNAEHGHVKITDVKMVS
Ga0137404_1090088523300012929Vadose Zone SoilSSRVALAEHVGHTVTATGVVSNAKMHNMKEDAKEAAKDSGMKKSDAEHGHLTVTEVKMVSDSCK*
Ga0137407_1047995123300012930Vadose Zone SoilWEVRSSRVALAKHVGHTITATGVVSHAKLHNMKEDTKEMAKDTGMKKSDAEHGHMKITAVKMVSDSCQK*
Ga0137410_1105642013300012944Vadose Zone SoilVTLAEHVGHTVTATGVVSNAAMHNMKEDTKNAVSKDSAEHGSLTVTAVKMVSDSCK*
Ga0164303_1133684813300012957SoilWEIKNSRVDLADHVGHTITETGVVSNAKMHNMKEDTQEAVKDSGMTDKNKEHGHLKVTDIKMVSDSCK*
Ga0164303_1136752813300012957SoilVSIPRCGVRSSKVDLGKHVGHTVTATGVVWNATMHNLKEDTKDAAKDSGMNNEHGHLKITAVKMVSESCK*
Ga0164302_1045505713300012961SoilSLANHVGHTVTATGVVSNSKLHNLKEDAKDTATDAGVKKDNREHGHLTITAIKMLSETCKY*
Ga0134110_1005403223300012975Grasslands SoilSRVALAKHVGHTITATGVVSHAKLHNMKEDTKDMAKDTGMKKSDAEHGHMKITAVKMVSDSCQK*
Ga0164309_1073519613300012984SoilEVRSSTVALADHVGHTVTATGVVSNAKMHNMKEDAKDAAKDSGMTKSNEEHGHLKVTDVKMVSDSCQQ*
Ga0157374_1004965563300013296Miscanthus RhizosphereVRSDAVSLAEHVGHTVTATGTVRAAAMHNMKGDAKDAAHDAGMKDKNTEHGHLQITDVKMVSDSCTK*
Ga0157374_1049861333300013296Miscanthus RhizosphereEVKSSKVALAEHVGHTVTATGVVSNATAHNLKEDAKDAAKDSGMKKSNTEHGHLNVTDVKMVSDSCK*
Ga0157374_1084926533300013296Miscanthus RhizosphereVTATGVVSNATAHNLKEDAKDAAKDSGMKKSNTEHGHLKVTDVKMVSDSCK*
Ga0120111_116376923300013764PermafrostEHVGHTVTATGVVSNATAHNVKEDAKDAAKDSGITKTNAEHGHLTVTAVKMVSDSCK*
Ga0120135_108759613300014054PermafrostTWEVRSSRVALGKHVGHAVTATGVVSHSKMHNMKEDAKEAAKDSGMKKSNAEHGHLKPTEVQMISDSCTK*
Ga0134078_1001181913300014157Grasslands SoilAKHVGHTITATGVVSHAKLHNMKEDTKEMAKDTGMKKSDAEHGHMKITAVKMVSDSCQK*
Ga0157377_1141083923300014745Miscanthus RhizosphereLAEHVGHTVTATGVVSNATAHNMKEDTKDMAHDAGVKKDNREHGHLKVTDVKMVSDSCKQ
Ga0157379_1054362513300014968Switchgrass RhizospherePPLVSIPRCGVRSSKVDLGKHVGHTVTATGVVSNATMHNLKEDTKDAAKDSGMNNEHGHLKITAVKMVSESCK*
Ga0157376_1064402333300014969Miscanthus RhizosphereVGHTVTATGVVSNATMHNLKEDTKDAAKDSGMNNEHGHFKITAVKMVSE
Ga0137405_127681813300015053Vadose Zone SoilVALAKHVGHTITATGVVSHAKLHNMKEDTKEMAKDTGMKKSDAEHGHMKITAVKMVSDSCQK*
Ga0137412_1040036413300015242Vadose Zone SoilATDGSTWEMHNSSAVTLTPHVGHQVTVTGAVSNAKMHNMKEDAKDAAKDSGMKKSNAEHGHLKPTEVQMISDSCTK*
Ga0134085_1017028613300015359Grasslands SoilVGHTITATGVVSHAKLHNMKEDTKEMAKDSGMKKSNAEHGHMKITEVKMVSDSCQK*
Ga0132258_1175341223300015371Arabidopsis RhizosphereGHTITATGVVSNAKMHNMKEDTQEAVKDSGMTDKNKEHGHLKVTNVKMVSDSCK*
Ga0132255_10349104323300015374Arabidopsis RhizosphereVDLASHVGHTIEAKGAVANAKAHNMKEDAKDAAQDSGMKKSNTEHGHLKVTDVRMVAESCQ*
Ga0066667_1235383513300018433Grasslands SoilVRSSRVALAEHVGHTVTATGVVSNAKMHKMKEDAKQAAKDSGMKKSDAEHGHLTVTEIKMVSDSCK
Ga0066662_1184383813300018468Grasslands SoilMVNLASYVDKQVSITGAVSNAKMHNLKEDAKDAATDTGVKKDNAEHGHLKPTEVQKVSDSCQK
Ga0193715_109138513300019878SoilSDGSTWEVRSSKVDLAKHVGHTVTATGVVSNAAMHNMKEDAKDAAKDSGMKKNNNEHGHLTVTQVKMVSDSCQ
Ga0193755_109161513300020004SoilRVALAKHVGHTVTATGVVSNAKMHNLKEDAKEAAKDSGMKKSDAEHGHLTVTEVKMVSDSCK
Ga0193755_109428123300020004SoilLDLAEHVGHTVTATGAVSSATMHNLKEDAKDAAKDSGMTKTNNEHGHLTVTQVKMVSDSC
Ga0193735_114535213300020006SoilVALGEHVGHTVTATGAVSNATMHNMKEDAKDAAKDSGMKKSDAEHGHMKITDVRMVSESC
Ga0210407_1050805313300020579SoilDHVGHTVTATGVVSNATMHNMKEDAKDAAKDSGMTKSDKEHGHLKVTAVKMVSESCK
Ga0179596_1036916523300021086Vadose Zone SoilVDLAEHLGHTVTATGVVSNAKMHNMKEDAKETAKDSGMKKSNAEHGHMKITDVKMVSESC
Ga0210400_1027984733300021170SoilHVGHTITATGVVSNAMAHNLKEDTKDAAQDTGMKKSNTEHGHLKITHVKMVSESCQR
Ga0210384_1008906853300021432SoilVTATGVVSNATAHNMKEDAKDAAKDSGMKKTNDEHGHLTVTDVKMVSESCN
Ga0210384_1173049513300021432SoilHVGHTVTATGVVSNAKMHNMKEDAKEGAKDSGMTKTDAEHGHLTVTEVKMVSDSCK
Ga0210402_1124582013300021478SoilRGALAAHVGHTVSATGVVSNAAMHNMKEDTKDLAKDSGVKKDDSEHGHLKITDIKMVSDSCGK
Ga0210410_1150112613300021479SoilDKVALADHGGHTIRATGVVSNAKLHNLKEDAKDAAKDTGVKKTDTEHGHLTITSMKMVGESCK
Ga0210409_1170135213300021559SoilVHSSDSSDSRVSLSDHVGHTVTATGVVSNAKLHNLKEDAKDAAKDSGVKKNNTEHGHLTITAIKMVRESCK
Ga0222729_107328413300022507SoilLAEHVGHTVIATGVVSNATMHNMKEDAKDAAKDSGMKKDDSEHGHLKVTAVKMVSESCK
Ga0242654_1043382723300022726SoilRSNNAVDLSSHLGHTVEAKGVVTNAKMHNMKEDAKDMAKDSGVKKSATEHGHLKVTSVRMVSDSCQK
Ga0207926_111197023300025619Arctic Peat SoilVRSSRVSLAGHVGHTISATGVVSNAKLHNLKEDTKDAATDSGMKKADSEHGHLTITEVKMVSDSCQK
Ga0207684_1007307633300025910Corn, Switchgrass And Miscanthus RhizosphereVRSSLVDLAEHLGHTVTATGVVSNAKMHNMKEDAKETAKASGMKKSNAEHGHMKITDVKMVSESCK
Ga0207663_1100030813300025916Corn, Switchgrass And Miscanthus RhizosphereKVDLGKHVGHTVTATGVVSNATMHNLKEDTKDAAKDSGMNNEHGHFKITAVKMVSESCK
Ga0207652_1178450023300025921Corn RhizosphereTWEVKSSNVALADHVGHTVTATGVVSNAKMHNMKEDAKDAAKDSGMTKSNEEHGHLKVTDVKMVSDSCQQ
Ga0207646_1057324913300025922Corn, Switchgrass And Miscanthus RhizosphereALGEHVGHTVTPTGAVSNAKMHNMKEDAKDTVKDSGMKKSNAEHGHMTITDLKMVSESCN
Ga0207687_1169493923300025927Miscanthus RhizosphereWEVRSSKVALAEHVGHTVTATGVVSNAKMHNMKEDAKDAAKDSGMTKSDNEHGHLKVTDVKMVSESCQK
Ga0207686_1065292133300025934Miscanthus RhizosphereKSSNVALADHVGHTVTATGVVSNAKMHNMKEDAKDAAKDSGMTKSNEEHGHLKVTDVKMVSDSCQQ
Ga0207665_1082295133300025939Corn, Switchgrass And Miscanthus RhizosphereVSIPRCGIRSSKVDLGKHVGHTVTATGVVSNATMHNLKEDTKDAAKDSGMNNEHGHFKITAVKMVSESCK
Ga0207689_1108818523300025942Miscanthus RhizosphereVALAEHVGHTVTATGVVSNAAMHNMKEDAKDAAKDSGATKTNDEHGHLKITAVKMVSDSC
Ga0209438_107058523300026285Grasslands SoilSKHVGETVTATGVVSHQKLHNMKEDAKDAAADTGVKKDNAEHGHLKVTSIHSVGGSCRY
Ga0209160_117896723300026532SoilDGSTWEVRSSRVVLAKHVGHTITATGVVSHAKLHNMKEDTKEMAKDTGMKKSDAEHGHMKITAVKMVSDSCQK
Ga0209160_117967123300026532SoilDGSTWEVRSSRVVLAKHVGHTITATGVVSHAKLHNMKEDTKDMAKDTGMKKSDAEHGHMKITAVKMVSDSCQK
Ga0209331_115708613300027603Forest SoilHTVTATGVVSNATAHNMKEDAKEGAKDSGMKKSDAEHGHLTVTEVKMVSDSCK
Ga0209528_106985033300027610Forest SoilGHMVTATGVVSHSKMHNMKEDAKEAAKDSGMKKSDAEHGHMTITDVKMVSDSCQK
Ga0208988_105288613300027633Forest SoilTWEVRDDGSANLASHVGHTISAKGVVSHAKMHNMKEDAKDAAKDSGMKKSDTEHGHMKITDVKMVSDSCK
Ga0209217_109319623300027651Forest SoilRVALAEHVGHTVTATGVVSNAKMHNMKEDAKEGAKDSGMKKSDAEHGHLTVTEVKMVSDSCK
Ga0209180_1031803223300027846Vadose Zone SoilRVALAEHVGHTVTATGVVSNAKMHNMKEDAKETAKDSGMKKSDTEHGHMTITDVKMVSESCK
Ga0209701_1000479613300027862Vadose Zone SoilTVTATGVVSNAKMHNMKEDAKETAKDSGMKKSNTEHGHTKITDVKIVSESYK
Ga0209701_1028118013300027862Vadose Zone SoilTVTATGVVSNAKMHNMKEDAKETAKDSGMKKSNAEHGHMKITDVKMVSESCK
Ga0209283_1003240643300027875Vadose Zone SoilMTEVRGKCDCSRVDLAEHLGHTVTATGVVSNAKMHNMKEDAKETAKDSGMKKSNAEHGHMKITDVKMVSESCK
Ga0209488_1006754133300027903Vadose Zone SoilMTEVRGKCDCSRVDLAEHLGHTVTATGVVSNAKMHNMKEDAKETAKDSGMKKSNTEHGHTKITDVKIVSESYK
Ga0209526_1044388313300028047Forest SoilGKHVGHTVTVTGVVSNAKMHNMKEDAKEMAKDSGMKKSDAEHGHLKATEVKMVSDSCK
Ga0137415_10001744223300028536Vadose Zone SoilVTATGVVSNAKMHNMKEDAKETAKDSGMKKSNAEHGHMKTTDVKMVSESCK
Ga0137415_1006124413300028536Vadose Zone SoilRSSKVALAEHVGHTVTATGVVSHAKMHNMKEDAKDAAKDSGMKKSDAEHGHLTVTEVKMVSDSCK
Ga0137415_1007526213300028536Vadose Zone SoilDLAEHVGHTVTATGVVSNATMHNMKEDAKDAAKDSGMKKSDTEHGHLKVTDVKMVSDSCK
Ga0311348_1029960013300030019FenQSDKVALADHVGHTVTATGVVANPAMHNMKEDAKNTVDKDSTEHGHLTVTAVKMVSESCK
Ga0307476_1114672223300031715Hardwood Forest SoilKVALADHLGHTVTATGVVSNSTMHNTKEDAKDAATDAGVKKSNTEHGHMTITSVKMVSESCK
Ga0310813_1132764813300031716SoilSLAKHVGHTVAATGVVSHTKLHNLKEDAKGTAADTGVKKNNAEHGHLTVTGVKMVSDSCQ
Ga0307471_10361134313300032180Hardwood Forest SoilVTATGVVSSPTMHDMKEDAKDAAKDSGMTKSNDEKGHLTVTQVKMVSDSCQ
Ga0307471_10415821923300032180Hardwood Forest SoilVRSSRVDLAEHVGHTVTTTGVVSNAKMHNLKEDAKETAKDSGMKKSDAEHGHMTITDVKMVSDSCK
Ga0335081_1104633513300032892SoilSAVDLAPHVGHEVKITGAVKDAKMHNLKEDAKDAAKDSGMTKNNTEHGHLEPTDIQMVGDTCTK

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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