Metagenome / Metatranscriptome Family F055913

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055913
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	69 residues
Representative Sequence	MNFEQEIVRLQDTLVVMAEIQRRQAEVQKMQAEGWALHEQRMAHVDVRLAEITDKLDGLIGFMNGQFRKQ
Number of Associated Samples	111
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	35.04 %
% of genes near scaffold ends (potentially truncated)	21.74 %
% of genes from short scaffolds (< 2000 bps)	78.26 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (78.261 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds (7.971 % of family members)
Environment Ontology (ENVO)	Unclassified (27.536 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (38.406 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 68.37% β-sheet: 0.00% Coil/Unstructured: 31.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF01790	LGT	13.97
PF11253	DUF3052	10.29
PF16861	Carbam_trans_C	7.35
PF00591	Glycos_transf_3	5.15
PF07517	SecA_DEAD	3.68
PF13519	VWA_2	2.94
PF07090	GATase1_like	2.21
PF03795	YCII	1.47
PF03702	AnmK	1.47
PF00730	HhH-GPD	0.74
PF06245	DUF1015	0.74
PF03308	MeaB	0.74
PF00583	Acetyltransf_1	0.74
PF07811	TadE	0.74
PF00578	AhpC-TSA	0.74
PF01156	IU_nuc_hydro	0.74
PF16762	RHH_6	0.74
PF01850	PIN	0.74
PF13400	Tad	0.74
PF08459	UvrC_RNaseH_dom	0.74
PF04325	DUF465	0.74
PF00694	Aconitase_C	0.74
PF07726	AAA_3	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG0682	Prolipoprotein diacylglyceryltransferase	Cell wall/membrane/envelope biogenesis [M]	13.97
COG0653	Preprotein translocase subunit SecA (ATPase, RNA helicase)	Intracellular trafficking, secretion, and vesicular transport [U]	3.68
COG5426	Uncharacterized protein STM3548, contains class I glutamine amidotransferase domain	General function prediction only [R]	2.21
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.47
COG2377	1,6-Anhydro-N-acetylmuramate kinase	Cell wall/membrane/envelope biogenesis [M]	1.47
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.74
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.74
COG0322	Excinuclease UvrABC, nuclease subunit	Replication, recombination and repair [L]	0.74
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.74
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.74
COG1957	Inosine-uridine nucleoside N-ribohydrolase	Nucleotide transport and metabolism [F]	0.74
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.74
COG4198	Uncharacterized conserved protein, DUF1015 family	Function unknown [S]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	78.26 %
Unclassified	root	N/A	21.74 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	78.26 %
Unclassified	root	N/A	21.74 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	78.26 %
Unclassified	root	N/A	21.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	51.45 %
Unclassified	root	N/A	21.74 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	44.20 %
Unclassified	root	N/A	21.74 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.72 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.72 %

Name	Rank	Taxonomy	Distribution
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	34.06 %
Unclassified	root	N/A	21.74 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.25 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.72 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.74 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	12.32 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.25 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	4.35 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	1.45 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.72 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.74 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	12.32 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	4.35 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	1.45 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.72 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.72 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	21.74 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	12.32 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	4.35 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1.45 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.72 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.72 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003994\|Ga0055435_10041091	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1084	Open in IMG/M
3300005329\|Ga0070683_100114854	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2541	Open in IMG/M
3300005329\|Ga0070683_100513147	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300005334\|Ga0068869_100410316	All Organisms → cellular organisms → Bacteria	1116	Open in IMG/M
3300005434\|Ga0070709_11738092	Not Available	510	Open in IMG/M
3300005434\|Ga0070709_11778028	All Organisms → cellular organisms → Bacteria	504	Open in IMG/M
3300005439\|Ga0070711_101327383	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	625	Open in IMG/M
3300005439\|Ga0070711_101999807	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	510	Open in IMG/M
3300005454\|Ga0066687_10936980	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	516	Open in IMG/M
3300005459\|Ga0068867_100853398	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	816	Open in IMG/M
3300005532\|Ga0070739_10480250	All Organisms → cellular organisms → Bacteria → Acidobacteria	564	Open in IMG/M
3300005538\|Ga0070731_10355612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	973	Open in IMG/M
3300005541\|Ga0070733_10048105	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2668	Open in IMG/M
3300005541\|Ga0070733_10048105	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2668	Open in IMG/M
3300005541\|Ga0070733_10833107	Not Available	620	Open in IMG/M
3300005542\|Ga0070732_10589911	Not Available	675	Open in IMG/M
3300005547\|Ga0070693_100225906	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300005547\|Ga0070693_101601600	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	511	Open in IMG/M
3300005577\|Ga0068857_100013757	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7050	Open in IMG/M
3300005836\|Ga0074470_10375618	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	63568	Open in IMG/M
3300005843\|Ga0068860_100197459	All Organisms → cellular organisms → Bacteria	1949	Open in IMG/M
3300006047\|Ga0075024_100562919	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	607	Open in IMG/M
3300006050\|Ga0075028_100132047	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1304	Open in IMG/M
3300006050\|Ga0075028_100339287	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	846	Open in IMG/M
3300006059\|Ga0075017_100342419	Not Available	1112	Open in IMG/M
3300006059\|Ga0075017_100418361	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300006059\|Ga0075017_101074153	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300006102\|Ga0075015_100411009	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	765	Open in IMG/M
3300006102\|Ga0075015_100972788	All Organisms → cellular organisms → Bacteria → Acidobacteria	518	Open in IMG/M
3300006175\|Ga0070712_101489933	Not Available	591	Open in IMG/M
3300006237\|Ga0097621_100014500	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5899	Open in IMG/M
3300006358\|Ga0068871_100675658	All Organisms → cellular organisms → Bacteria	944	Open in IMG/M
3300006638\|Ga0075522_10000102	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	53139	Open in IMG/M
3300006854\|Ga0075425_101708264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	708	Open in IMG/M
3300006881\|Ga0068865_101897205	Not Available	539	Open in IMG/M
3300009088\|Ga0099830_10271553	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1347	Open in IMG/M
3300009088\|Ga0099830_11665621	Not Available	532	Open in IMG/M
3300009089\|Ga0099828_10228226	All Organisms → cellular organisms → Bacteria	1665	Open in IMG/M
3300009090\|Ga0099827_10321653	Not Available	1312	Open in IMG/M
3300009093\|Ga0105240_12493021	Not Available	535	Open in IMG/M
3300009098\|Ga0105245_13180512	All Organisms → cellular organisms → Bacteria	509	Open in IMG/M
3300009101\|Ga0105247_10203870	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1330	Open in IMG/M
3300009148\|Ga0105243_13010226	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	511	Open in IMG/M
3300009174\|Ga0105241_10237114	All Organisms → cellular organisms → Bacteria → Acidobacteria	1540	Open in IMG/M
3300009174\|Ga0105241_10769352	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	884	Open in IMG/M
3300009176\|Ga0105242_10136663	All Organisms → cellular organisms → Bacteria	2122	Open in IMG/M
3300009176\|Ga0105242_10406535	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300009524\|Ga0116225_1464775	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	562	Open in IMG/M
3300009839\|Ga0116223_10164826	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1370	Open in IMG/M
3300010341\|Ga0074045_10198199	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1346	Open in IMG/M
3300010343\|Ga0074044_10091526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2050	Open in IMG/M
3300010379\|Ga0136449_100001014	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	83066	Open in IMG/M
3300010379\|Ga0136449_100025395	All Organisms → cellular organisms → Bacteria → Acidobacteria	14724	Open in IMG/M
3300010379\|Ga0136449_104691155	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	500	Open in IMG/M
3300010396\|Ga0134126_11110051	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	882	Open in IMG/M
3300011119\|Ga0105246_10643767	All Organisms → cellular organisms → Bacteria	922	Open in IMG/M
3300012209\|Ga0137379_11326535	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	624	Open in IMG/M
3300012210\|Ga0137378_11463172	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	595	Open in IMG/M
3300012211\|Ga0137377_10449249	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1227	Open in IMG/M
3300012362\|Ga0137361_11933669	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	506	Open in IMG/M
3300012917\|Ga0137395_10072483	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2227	Open in IMG/M
3300013104\|Ga0157370_11248526	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	670	Open in IMG/M
3300013307\|Ga0157372_10839619	All Organisms → cellular organisms → Bacteria	1067	Open in IMG/M
3300014056\|Ga0120125_1115119	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	637	Open in IMG/M
3300014156\|Ga0181518_10364445	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	705	Open in IMG/M
3300014159\|Ga0181530_10208103	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1071	Open in IMG/M
3300014201\|Ga0181537_11132956	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300014325\|Ga0163163_13161373	Not Available	513	Open in IMG/M
3300014492\|Ga0182013_10155722	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1435	Open in IMG/M
3300014493\|Ga0182016_10014238	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	7471	Open in IMG/M
3300014495\|Ga0182015_10122814	All Organisms → cellular organisms → Bacteria	1783	Open in IMG/M
3300014495\|Ga0182015_10710550	Not Available	633	Open in IMG/M
3300014838\|Ga0182030_11408822	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300017934\|Ga0187803_10325673	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	615	Open in IMG/M
3300017966\|Ga0187776_10885432	Not Available	647	Open in IMG/M
3300017975\|Ga0187782_10528460	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	903	Open in IMG/M
3300018088\|Ga0187771_10022846	All Organisms → cellular organisms → Bacteria	4685	Open in IMG/M
3300018088\|Ga0187771_10044501	All Organisms → cellular organisms → Bacteria → Acidobacteria	3435	Open in IMG/M
3300018090\|Ga0187770_10305159	Not Available	1239	Open in IMG/M
3300018090\|Ga0187770_10955999	All Organisms → cellular organisms → Bacteria	688	Open in IMG/M
3300019275\|Ga0187798_1333586	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	542	Open in IMG/M
3300019787\|Ga0182031_1168803	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300021171\|Ga0210405_10117063	All Organisms → cellular organisms → Bacteria	2105	Open in IMG/M
3300021402\|Ga0210385_10095390	All Organisms → cellular organisms → Bacteria	2067	Open in IMG/M
3300021407\|Ga0210383_10144170	All Organisms → cellular organisms → Bacteria	2022	Open in IMG/M
3300021420\|Ga0210394_10548264	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1017	Open in IMG/M
3300021432\|Ga0210384_10327389	All Organisms → cellular organisms → Bacteria	1380	Open in IMG/M
3300021478\|Ga0210402_10291448	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1510	Open in IMG/M
3300021479\|Ga0210410_11134668	Not Available	672	Open in IMG/M
3300025551\|Ga0210131_1015190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1086	Open in IMG/M
3300025862\|Ga0209483_1001948	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15000	Open in IMG/M
3300025906\|Ga0207699_11183453	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300025911\|Ga0207654_10283870	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300025911\|Ga0207654_10433580	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	919	Open in IMG/M
3300025916\|Ga0207663_11568113	Not Available	530	Open in IMG/M
3300025924\|Ga0207694_10180973	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1709	Open in IMG/M
3300025927\|Ga0207687_10731085	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	841	Open in IMG/M
3300025935\|Ga0207709_10022899	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3549	Open in IMG/M
3300025938\|Ga0207704_10278503	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1270	Open in IMG/M
3300025938\|Ga0207704_11554666	Not Available	568	Open in IMG/M
3300026551\|Ga0209648_10273679	All Organisms → cellular organisms → Bacteria	1232	Open in IMG/M
3300027660\|Ga0209736_1097728	Not Available	800	Open in IMG/M
3300027842\|Ga0209580_10524930	Not Available	589	Open in IMG/M
3300027854\|Ga0209517_10004363	All Organisms → cellular organisms → Bacteria → Acidobacteria	18623	Open in IMG/M
3300027867\|Ga0209167_10002764	All Organisms → cellular organisms → Bacteria	9342	Open in IMG/M
3300027867\|Ga0209167_10002764	All Organisms → cellular organisms → Bacteria	9342	Open in IMG/M
3300027882\|Ga0209590_10041756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2503	Open in IMG/M
3300027894\|Ga0209068_10117171	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1419	Open in IMG/M
3300027905\|Ga0209415_10841602	Not Available	632	Open in IMG/M
3300027911\|Ga0209698_10680721	All Organisms → cellular organisms → Bacteria → Acidobacteria	784	Open in IMG/M
3300027915\|Ga0209069_10647577	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	614	Open in IMG/M
3300028800\|Ga0265338_10107139	All Organisms → cellular organisms → Bacteria	2261	Open in IMG/M
3300029636\|Ga0222749_10344124	Not Available	780	Open in IMG/M
3300029636\|Ga0222749_10400934	Not Available	727	Open in IMG/M
3300030606\|Ga0299906_10574633	Not Available	857	Open in IMG/M
3300030620\|Ga0302046_10469228	Not Available	1032	Open in IMG/M
3300030659\|Ga0316363_10114857	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1183	Open in IMG/M
3300031057\|Ga0170834_100350104	All Organisms → cellular organisms → Bacteria	2440	Open in IMG/M
3300031057\|Ga0170834_101060991	Not Available	757	Open in IMG/M
3300031128\|Ga0170823_12573077	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1965	Open in IMG/M
3300031231\|Ga0170824_108726651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	662	Open in IMG/M
3300031231\|Ga0170824_116820012	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	707	Open in IMG/M
3300031524\|Ga0302320_10141801	All Organisms → cellular organisms → Bacteria → Acidobacteria	3661	Open in IMG/M
3300031525\|Ga0302326_12726017	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300031525\|Ga0302326_13075123	Not Available	567	Open in IMG/M
3300031708\|Ga0310686_103884301	Not Available	593	Open in IMG/M
3300031720\|Ga0307469_11087153	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	751	Open in IMG/M
3300031788\|Ga0302319_10268990	All Organisms → cellular organisms → Bacteria	2039	Open in IMG/M
3300031820\|Ga0307473_10714731	Not Available	705	Open in IMG/M
3300031820\|Ga0307473_11540912	All Organisms → cellular organisms → Bacteria → Acidobacteria	505	Open in IMG/M
3300031902\|Ga0302322_101029260	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300032174\|Ga0307470_10836106	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	717	Open in IMG/M
3300032515\|Ga0348332_13777627	All Organisms → cellular organisms → Bacteria → Acidobacteria	617	Open in IMG/M
3300032954\|Ga0335083_11354258	Not Available	545	Open in IMG/M
3300033407\|Ga0214472_11033739	Not Available	725	Open in IMG/M
3300033977\|Ga0314861_0031523	All Organisms → cellular organisms → Bacteria	3155	Open in IMG/M
3300033977\|Ga0314861_0217855	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	893	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.71%
Host-Associated	Host-Associated	20.29%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.67%
Plants	Host-Associated → Plants	20.29%
Aquatic	Environmental → Aquatic	13.04%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.04%
Sediment	Environmental → Aquatic → Sediment	8.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.07%
Peat	Environmental → Terrestrial → Peat	3.62%
Freshwater	Environmental → Aquatic → Freshwater	2.90%
Roots	Host-Associated → Plants → Roots	2.17%
Marine	Environmental → Aquatic → Marine	1.45%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.58%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.70%
Loam	Environmental → Terrestrial → Soil → Loam	8.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.07%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.62%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.17%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.45%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.72%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.70%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.97%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.07%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.35%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.62%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.17%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.17%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.17%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.17%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.45%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.72%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.72%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.25%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.97%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.52%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.07%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.35%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.62%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.62%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.90%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.17%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	2.17%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.45%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.45%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.45%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.45%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.45%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.45%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.72%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.72%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.72%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.72%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.72%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.72%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.72%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300003994	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006638	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014492	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019275	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019787	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025551	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030620	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT147D111	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_2	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033407	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT140D175	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_18496971	3300000033	Soil	MDFEQAMKDVQNTLIVVAEIQRRQAEVQKAQAEELELHRKRMAHIDKNLAEITDKLNGLIGYVSGHQEPPQ*
Ga0055435_100410912	3300003994	Natural And Restored Wetlands	MNFEQEISQCKDTLIVVAEIQRRQAEKQMMQAEGLALHEQRMNYSDVGLSEITDKREGLTGLIDTHFRQPPN*
Ga0070683_1001148542	3300005329	Corn Rhizosphere	MNFEQEIRQLQDTVVVMAEIQRRQAAVQKLQAEGMELHEKRMAHVDMRLAEITDKLDGLIGFMGGYFKGQN*
Ga0070683_1005131472	3300005329	Corn Rhizosphere	MADIQRRQAAVQKMQAEGMQLHEERMAHVDMRLAEITDKLDGLIGFMGGYFKGTQ*
Ga0068869_1004103162	3300005334	Miscanthus Rhizosphere	MAEIQRRQAEVQKLQAEYVVSMQESLRVHQQRMDHVDMRLSEITDKLDGLIGFMGGYFRGPQPSL*
Ga0070709_117380921	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MDFEHEINQLKDTLIVMAEIQRRQAEVQKMQAEGFALHEQRMNHIELNLSEISDKLNGLIGFMDGHFRKE*
Ga0070709_117780282	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RQLQDTVVVMAEIQRRQAAVQKLQAEGMELHEKRMAHVDMRLAEITDKLDGLIGFMGGYFKGQN*
Ga0070711_1013273831	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MNFEQEIVRLQDTLVVMAEIQRRQAEVQKMQAEGWTLHEQRMAHVDLRLAE
Ga0070711_1019998071	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LQDTAVVMAEIQRRQAEVQKLQAEGMALHEQRMAHVDMRLAEITDKLDGLIGFMGGYFKGTQ*
Ga0066687_109369801	3300005454	Soil	MADIQRRQAEVQKLQAENVVHMQKSMRLHEKRMDHVDMRLAEITDKLDGLIGFMGGYFKGTQ*
Ga0068867_1008533982	3300005459	Miscanthus Rhizosphere	MAEIQRRQAEVQKLQAENVVHMKASMRLHGQRTDHVDMRLAEITNKLDGLIGFMGGYFKGTQ*
Ga0070739_104802501	3300005532	Surface Soil	MAEIQRRQAEVQKMQAESIALHDQRMNHIDLRLAEITDKLDGLIGFMGGFFHPPQS*
Ga0070731_103556123	3300005538	Surface Soil	AIVEVMDFEQEINRLKDTLIVMAEIQRRQAEVQKMQAEGLALHEQRMNHIDMRLAEIADKLDGLIGFMDGYFRKE*
Ga0070733_100481053	3300005541	Surface Soil	MDFAQEINQLKDTLIIVAEIQRRQAEIQKMQAERIVATEEGMKLHEQRMNHIELNPPRFRTSSTG*
Ga0070733_100481054	3300005541	Surface Soil	MNFEQEINQLKDTLIVMAEIQRRQAEVQKMQAEGLALHEQRMNHIELNLSEISDKLNGLIGFMKGYFRKE*
Ga0070733_108331071	3300005541	Surface Soil	MDFEQEINRLKDTLIVMAEIQRRQAEVQKMQAEGLALHEQRMNHIDMRLAEIADKLDGLIGFMDGYFRKE*
Ga0070732_105899112	3300005542	Surface Soil	MDFEQEINQLRDTLVVTAEIQRRQAEIQKMQAERIVATEEGMKLHEQRMNHVDLNLSEITDKLNGLIGFMDGYFRKE*
Ga0070693_1002259061	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MAEIQRRQAEVQKLQAEGMHLHEQRMAHIDMRLVEITDKLDGLIGFMGLLQGTELVS*
Ga0070693_1016016001	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MNFEQEIVRLQDTLVVMAEIQRRQAEVQKMQAEGGALHEQRMAHVDVRLAEISDKLDGLIGFMNGQFRKQ*
Ga0068857_1000137573	3300005577	Corn Rhizosphere	VDFEHEIRQLQDTAIVMADIQRRQAAVQKMQAEGMQLHEERMAHVDMRLAEITDKLDGLIGFMGGYFKGTQ*
Ga0074470_1037561837	3300005836	Sediment (Intertidal)	MNFEQEISQCKDTSLVVAEIQRRQAEKQMMQAEGLALHEQRMNYSDVGLSEITDKREGLTGLMDAHFRRPPN*
Ga0068860_1001974592	3300005843	Switchgrass Rhizosphere	MAEIQRRQAEVQKLQAENVVHMQASMRLHEQRMDHVDMRLAEITDKLDGLIGFMGGYFKGTQ*
Ga0075024_1005629192	3300006047	Watersheds	MNFEQEIVRLQDTLVVMTEIQRRQAEVQKMQAEGWALHEQRMNHVDFR
Ga0075028_1001320472	3300006050	Watersheds	MNFEQEIVRLQDTLVVMAEIQRRQAEVQKMQAEGWALHEQRMNHVDFRLAEITDKLDGLIGLQ*
Ga0075028_1003392871	3300006050	Watersheds	MDFEQEIVRLQDTLVVMAEIQRRQAEVQKMQAEGLVLHEQRMSHIDMRLAEFTDKLDGLIGFMNGYFRKP*
Ga0075017_1003424193	3300006059	Watersheds	MSFEQEIVRLQDTLVVMAEIQRRQAEVQKMQAEGWTLHEQRMAHVDLRLAEITDKLDGLIGFTNGQFGKQ*
Ga0075017_1004183611	3300006059	Watersheds	AEVQKLQAENVVYMQEGLRVHEQRMAHVDMRLAEITDKLDGLIGFMGGYFKGTQ*
Ga0075017_1010741531	3300006059	Watersheds	QAEVQKMQVEGMTLHEQRMNHVDMRLAEISDKLDGLIGFIDGQSHRPQ*
Ga0075015_1004110091	3300006102	Watersheds	VNFEQEIRRLQDTAVVMAEVQRRQAEVQKLQAENVVYMQEGLRVHEQRMAHVDMRLAEITDKLDGLIGFMGGYFKGTQ*
Ga0075015_1009727882	3300006102	Watersheds	MNFEHEIQQLKDTLIVVSEIQRRQAEVQKMQVEGMTLHEQRMNHVDMRLAEISDKLDGLIGFIDGQSHRPQ*
Ga0070712_1014899331	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	EHEIRHLQDTAVVMADIQRRQAAVQKMQAEGMELHEKRMAHIDMRLAEITDKLDGLIGFQRGQFPDPK*
Ga0097621_1000145003	3300006237	Miscanthus Rhizosphere	VNFEHEIRQLQDTAIVMAEIQRRQAEVQKLQAEYVVSMQESLRVHQQRMDHVDMRLSEITDKLDGLIGFMGGYFRGPQPSL*
Ga0068871_1006756582	3300006358	Miscanthus Rhizosphere	VNFDQEIRKLQDTAVVMAEIQRRQAEVQKLQAENIVYMQQSMRVHDQRMNHVDMRLAEITDKLDGLIGFMGGYFKGPN*
Ga0075522_1000010216	3300006638	Arctic Peat Soil	MAEIQRRQAEVQKLQAENVVSAQESLRIHQQRMDHVDMRLAEITDKLDGLIGFMGGYFKGPN*
Ga0075425_1017082642	3300006854	Populus Rhizosphere	VNFEQESRQLQDTVVVMAEIQRRQAAVQKLQAEGMELHEKRMAHVDMRLAEITDKLDGLIGFMGGYFKGTQ*
Ga0068865_1018972051	3300006881	Miscanthus Rhizosphere	MDFEREIKQLQDTAIVMAEIQRRQAEVQRLQAENTVYMQESMRVHQQRMDHVDMRLAEITDKLKTSR*
Ga0099830_102715533	3300009088	Vadose Zone Soil	MNFEQEFNQLKDTLVVMAEIQRRQAEVQKMQAEGMALHEKRMNHIELTLSEIGDKLNGLIGFMDGYFRKQ*
Ga0099830_116656212	3300009088	Vadose Zone Soil	MNFEQEINQLKDTLAVVVEVQRRQAEIQKMQAEGMALHEKRMNHIELTMSEIGDKLNGLIGYVDGMGPPPPS*
Ga0099828_102282263	3300009089	Vadose Zone Soil	INQLKDTLVVMAEIQRRQAQKMPAEGMALHAQRMNHIELTMSEIGDKLNGLIGFMDGYFRKQ*
Ga0099827_103216532	3300009090	Vadose Zone Soil	MDFEQEINQLKDTLVVMAEIQRRQAEVQKMQAEGFALHEQRMSHIELNLSEISDKLNGLIGFMDGYFRKQ*
Ga0105240_124930212	3300009093	Corn Rhizosphere	VNFEHEIRQLQDTAVVMADIQRRQAAVQKMQAEGMELHEKRMAHIDMRLVEITDKLDGLIGFMGGHFRGPQ*
Ga0105245_131805121	3300009098	Miscanthus Rhizosphere	VNFDQESRKLQDTAVVMAEIQRRQAEVQKLQAENVVYMQESLRVHDQRMNHIDMRLAEITDKLDGLIGFMGGYFKGPN*
Ga0105247_102038702	3300009101	Switchgrass Rhizosphere	VNFEREIRQLQDTAIVMAEIQRRQAEVQKLQAENVVHMQASMRLHEQRMDHVDMRLAEITDKLEGLIGFMGGYFKGTQ*
Ga0105243_130102261	3300009148	Miscanthus Rhizosphere	VNFEHEIRQLQDTAIVMAEIQRRQAEVQKLQAENVVHMQASMRLHEQRMDHVDMRLAEITDKLDGLIGFMGGYFKGT
Ga0105241_102371142	3300009174	Corn Rhizosphere	MNFEQEIVRLQDTLVVMAEIQRRQAEVQKMQAEGWALHEQRMAHVDVRLAEITDKLDGLIGFMNGQFRKQ*
Ga0105241_107693521	3300009174	Corn Rhizosphere	VNFEQEIRQLQDTAVVMAEIQRRQAEVQKLQAENVVYMQEGMRLHEQRMAHVDMRLAEITDKLDGLIGFMGGYFKGTQ*
Ga0105242_101366632	3300009176	Miscanthus Rhizosphere	VNFEHEIRQLQDTAIVMAEIQRRQAEVQKLQAENVVHMQASMRLHEQRMDHVDMRLAEITDKLDGLIGFMGGYFKGTQ*
Ga0105242_104065351	3300009176	Miscanthus Rhizosphere	EGQKNRADPVVNMQESMRVHEQRMAYIDMRLAAITKKLGFMGGYFKGTQ*
Ga0116225_14647752	3300009524	Peatlands Soil	VNFEQEIRRLQDTAVVMAEIQRRQAEVQKLQAENVVYMQESMRVQYQRMKPIDMRLAEITDKLDGLIGFMGGYFKGPN*
Ga0116223_101648263	3300009839	Peatlands Soil	VNLEQEIRRLQDTAVVMAEIQRRQAEVQKLQAENVVYMQESMRVHDQRMNHIDMRLAEITDKLDGLIGFMGGYFKGPN*
Ga0074045_101981991	3300010341	Bog Forest Soil	DSLQCETLAWYTDGQMNFEQAIHQLNDTLIVVAEIQRRQAEIQKDQAEGIAMVREGMLLHEQRMNHIDMRLAEITDKLDGLIGYMDGQRPN*
Ga0074044_100915262	3300010343	Bog Forest Soil	MNFEQAIHQLNDTLIVVAEIQRRQAEIQKDQAEGIAMVREGMLLHEQRMNHIDMRLAEITDKLDGLIGYMDGQRPN*
Ga0136449_10000101412	3300010379	Peatlands Soil	VNFEQEIRRLQDTAVVMAEIQRRQAEVQKLQAENVVYMQESMRVHDQRMNHIDMRLAEITDKLDGLIGFMGGYFKGPN*
Ga0136449_1000253955	3300010379	Peatlands Soil	MDFQQATVQIQDTLIVMAEIQRRQAEVQEMQAEGIALHEARMNHVDMRFAEITGKLDESIGLDGQFGKH*
Ga0136449_1046911552	3300010379	Peatlands Soil	MNFEQEIVRLQDTLVVVAEIQRRQAEVQKMQAEGWALHEQRMAHVDVRLAEITDKLDGLIGFMNGPFRKQ*
Ga0134126_111100512	3300010396	Terrestrial Soil	EQEIRQLQDTVVVMADIQRRQAAVQKLQAEGMELHEKRMAHVDMRVAEITDKLDSLIGFMGGYFKGTR*
Ga0105246_106437671	3300011119	Miscanthus Rhizosphere	VDFEKEIRQLQDTAVVMAEIQRRQDEVQKLQAEGMHLHEQRMEHIDMRLAEITDKLDGLIGFM
Ga0137379_113265351	3300012209	Vadose Zone Soil	MNFEQEIVRLQDTLIVMAEIQRRQAEVQKAQAEGLALHEQRMSHIDGRLAEITDKL
Ga0137378_114631721	3300012210	Vadose Zone Soil	MNFEQEIVRLQDTLIVMAEIQRRQAEVQKAQAEGLALHEQRMSHIDGRLAEITDKLDGLIGFMNGYFRKQ*
Ga0137377_104492493	3300012211	Vadose Zone Soil	MNFEQEIVRLQDTLIVMAEIQRRQAEVQKAQAEGLALHEQRMSHIDVRLAEISDKLDGLIGFMNGYFRKQ*
Ga0137361_119336691	3300012362	Vadose Zone Soil	MNFEQEIIRLQDTLVVVAEIQRRQAEIQKMQAEGLALHEQRMNHIDERLSEITGKLDGLIGFMDGNLGKN*
Ga0137395_100724832	3300012917	Vadose Zone Soil	MDFEQEISRLQDTLVVMAEIQRLQADLQRTQAERIIATEEGMKLHEQRMNHVDMRLAEITDKLDGLIGFMDGYFRKQ*
Ga0157370_112485261	3300013104	Corn Rhizosphere	MADIQRRQAAVQKLQAEGMELHEKRMAHVDMRVAEITDKLDSLIGFMGGYFKGTR*
Ga0157372_108396192	3300013307	Corn Rhizosphere	VNFRQETRQLQDTVVVMADIQRRQAAVQKLQAEGMELHEKRMAHVDMRLAESTDKLDGLIGFMGGYFKGQN*
Ga0120125_11151192	3300014056	Permafrost	QEISRLQDTLVVMAEVQRLQADLQRIQAERIIATEEGMKLHEQRMNHIDMRLAEITDKLDGLIGFMDGYFRKE*
Ga0181518_103644452	3300014156	Bog	MNFEQAIHQLNDTLIVVAEIQRRQAEIQKDQAEGIAMIREGMLLHEQRMNHIDMRLVEITDKLDGLIGNMDGQRPN*
Ga0181530_102081032	3300014159	Bog	SLQCETPAWYTDGQMNFEQAIHQLNDTLIVVAEIQRRQAEIQKDQAEGIAMIREGMLLHEQRMNHIDMRLVEITDKLDGLIGNMDGQRPN*
Ga0181537_111329561	3300014201	Bog	MNFEQEANQLKDTLIVMAEIQRRQADVQRMQSEGLALHEQRMNHVDMRLAEIAYKLDG
Ga0163163_131613731	3300014325	Switchgrass Rhizosphere	VNFEHEIRQLQDTAIVMAEIQRRQAAVQKMQTEGMQLHEERMAHVDMRLAEITDKLDGLIGFMGGYFKGTQ*
Ga0182013_101557221	3300014492	Bog	MNFEQEIKQLKDTLIVVSEIQRRQADVQKMQADGMVLHEQRMNHVDMRLAEIADKLNGLIGFIDGQSPRPQ*
Ga0182016_100142387	3300014493	Bog	MTFEQEIKQLKDTLIVVSEIQRRQADVQKMQADGMVLHEQCMNHVDMRLAEIADKLNGLIGFIDGQSPRPQ*
Ga0182015_101228141	3300014495	Palsa	EIQRRQAEVQKMQAEGWALHEQRMAHVDMRLAEITDKLDGLTGFRNGPFRKP*
Ga0182015_107105502	3300014495	Palsa	MNFEQEDIRRWDSRLQDTWVVVAEIQRRQAEVQKMQAEGWALHEQPMAHVDVRLAEITDKLDGLIGFMNGQFRKP*
Ga0182030_114088221	3300014838	Bog	MNFEQEIKQLKDTLIVVSEIQRRQADVQKMQADGMVLHEQRMSHVDMRLAEIADKLNGLIGFIDGQSPRPQ*
Ga0187803_103256731	3300017934	Freshwater Sediment	MDFQVIGQLQGTLAVMAEIQRRQAEVRTMQTEGLALHEKRMNHIDERLSEITDKLDGLIGFMGGQFGKH
Ga0187776_108854322	3300017966	Tropical Peatland	MNFEEEINQLKDTLAVVVEIQRRQAEIQKMQAEGMTLHEERMNHIELTISEIGDKLNGLVGFMDGYFRKE
Ga0187782_105284601	3300017975	Tropical Peatland	MNFEQAVSQLQDTLIVVAEIQRRQAEIQKDQAERLAAAEKSMAIHNQRMDHIDMRLAEITDKLDGLIGYLDGQRPRPQ
Ga0187771_100228463	3300018088	Tropical Peatland	VPAAILYTYGQMNFEQAIVQLNDTLIVVAEIQRRQAEIQKMQAEDLAAMREGMRLHEQRMNHIDLRLAEITDKLDGLIGYMDGQRPN
Ga0187771_100445012	3300018088	Tropical Peatland	MNFEQEMNQLKDTLVVVSEIQRRQADVLKMQAEGMALHEQRMNHVDLKLAEITDKLDGLIGFMGGQFGDLQ
Ga0187770_103051591	3300018090	Tropical Peatland	MNFEQAIVQLNDTLIVVAEIQRRQAEIQKMQAEDLAAMREGMRLHEQRMNHIDLRLAEITDK
Ga0187770_109559992	3300018090	Tropical Peatland	MNFEQEMNQLKDTLIVVSEIQRRQADVWKMQAEGMALHEQRMDHVDLKLAEITDKLDGLTGFMGGQFGDLQ
Ga0187798_13335861	3300019275	Peatland	AIVQLNDTLIVVAEIQRRQAEIQKMQAEDLAAMREGMRLHEQRMNHIDLRLAEITDKLDGLIGYMDGQRPN
Ga0182031_11688031	3300019787	Bog	MNFEQEIKQLKDTLIVVSEIQRRQADVQKMQADGMVLHEQRMNHVDMRLAEIADKLDGLIGFIDGQSPRPQ
Ga0210405_101170633	3300021171	Soil	MDFEHEISRLQDTLMVMAEIRCRQAEIQKMHAERIIATEEGMRLHEQRMSHIELNLSEISDKLNVLIGFMDGYFRKD
Ga0210385_100953902	3300021402	Soil	MNFEQAINEVKDTLIVMAEIQRRQAEVQKLQAEGLAMHEQRMQHIETTLSEVGDKLNGLIGFMDNFTRRPQ
Ga0210383_101441702	3300021407	Soil	MAEVQRRQAEVQKLQAENVVYMQESMRVHDQRMNHIDMRLAEITDKLDGLIGFMGGHFKGPN
Ga0210394_105482642	3300021420	Soil	MDFEQEMNQVRDTLVVVTDIQRRQAEIQRMQAEGMALHEQRMAHIDMRLAEITDKMDGLIGFMGGFFEK
Ga0210384_103273893	3300021432	Soil	VNFEQEIRRLQHTAVVMAEIQRRQAEVQKLQAEGMQLHEQRMAHIDMRLVEITDKLDGLIGFMGGYFKEPH
Ga0210402_102914482	3300021478	Soil	MDFEQEIVRLQDTLVVMAEIQRRQADVQKMQAEGWALHEQRMAHVDMRLAEITDKLDGLIGFTNGQFGKQ
Ga0210410_111346682	3300021479	Soil	MNADKKIKPCRTHSRIQDYTGEQMDFEQEIVRLQDTLVVMAEIQRRQADVQKMQAEGWALHEQRMAHVDMRLAEITDKLDGLIGFTNGQFGKQ
Ga0210131_10151902	3300025551	Natural And Restored Wetlands	MNFEQEISQCKDTLIVVAEIQRRQAEKQMMQAEGLALHEQRMNYSDVGLSEITDKREGLTGLIDTHFRQPPN
Ga0209483_10019487	3300025862	Arctic Peat Soil	MAEIQRRQAEVQKLQAENVVSAQESLRIHQQRMDHVDMRLAEITDKLDGLIGFMGGYFKGPN
Ga0207699_111834532	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MNFEQEIRQLQDTVVVMAEIQRRQAAVQKLQAEGMELHEKRMAHVDMRLAEITDKLDGLIGFMGGYFKGQN
Ga0207654_102838702	3300025911	Corn Rhizosphere	VNFEHEIRQLQDTAIVMAEIQRRQAEVQKLQAEYVVSMQESLRVHQQRMDHVDMRLSEITDKLDGLIGFMGGYFRGPQPSL
Ga0207654_104335802	3300025911	Corn Rhizosphere	VDFEHEIRQLQDTAIVMADIQRRQAAVQKMQAEGMQLHEERMAHVDMRLAEITDKLDGLIGFMGGYFKGTQ
Ga0207663_115681131	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VVMADIQRRQAEVQKLQAENVVYMQESMRVHEQRMAHVDMRLAEITDKLDGLIGL
Ga0207694_101809732	3300025924	Corn Rhizosphere	MADIQRRQAAVQKMQAEGMQLHEERMAHVDMRLAEITDKLDGLIGFMGGYFKGTQ
Ga0207687_107310852	3300025927	Miscanthus Rhizosphere	MAEIQRRQAEVQKLQAENVVHMQASMRLHEQRMDHVDMRLAEITDKLDGLIGFMGGYFKGMQ
Ga0207709_100228992	3300025935	Miscanthus Rhizosphere	MNFEQEIVRLQDTLVVMAEIQRRQAEVQKMQAEGGALHEQRMAHVDVRLAEISDKLDGLIGFMNGQFRKQ
Ga0207704_102785032	3300025938	Miscanthus Rhizosphere	MAEIQRRQAEVQKLQAENVVHMQASMRLHEQRMDHVDMRLAEITDKLDGLIGFMGGYFKGTQ
Ga0207704_115546661	3300025938	Miscanthus Rhizosphere	MDFEREIKQLQDTAIVMAEIQRRQAEVQRLQAENTVYMQESMRVHQQRMDHVDMRLAEITDKLKTSR
Ga0209648_102736793	3300026551	Grasslands Soil	MNFEREIVRLQDTLVVMAEIQRRQAEVQKMQAEGLALHEQRMKHIDVRLAEFTDKFDGLLGFMNG
Ga0209736_10977281	3300027660	Forest Soil	MNFDQEIVRLHDTLVVMAEIQRRQAEVQKMQAEGWALHEQRMNHVDVRLAEITDKLDGLIGLQ
Ga0209580_105249302	3300027842	Surface Soil	MDFEQEINQLKDTLVVTAEIQRRQAEIQKMQAERIVATEEGMKLHEQRMNHVDLNLSEITDKLN
Ga0209517_100043639	3300027854	Peatlands Soil	MAEIQRRQAEVQKLQAENVVYMQESMRVHDQRMNHIDMRLAEITDKLDGLIGFMGGYFKGPN
Ga0209167_100027646	3300027867	Surface Soil	MDFAQEINQLKDTLIIVAEIQRRQAEIQKMQAERIVATEEGMKLHEQRMNHIELNPPRFRTSSTG
Ga0209167_100027647	3300027867	Surface Soil	MNFEQEINQLKDTLIVMAEIQRRQAEVQKMQAEGLALHEQRMNHIELNLSEISDKLNGLIGFMKGYFRKE
Ga0209590_100417563	3300027882	Vadose Zone Soil	MNFEQEFNQLKDTLVVMAEIQRRQAEVQKMQAEGMALHEKRMNHIELTLSEIGDKLNGLIGFMDGYFRKQ
Ga0209068_101171712	3300027894	Watersheds	MNFEQEIVRLQDTLVVMAEIQRRQAEVQKMQAEGWALHEQRMNHVDFRLAEITDKLDGLIGLQ
Ga0209415_108416022	3300027905	Peatlands Soil	MNFEQEIVRLQDTLVVVAEIQRRQAEVQKMQAEGWALHEQRMAHVDVRLSEITD
Ga0209698_106807212	3300027911	Watersheds	MNFEHEIQQLKDTLIVVSEIQRRQAEVQKMQVEGMTLHEQRMNHVDMRLAEISDKLDGLIGFIDGQSHRPQ
Ga0209069_106475772	3300027915	Watersheds	MNFEQEIVRLQDTLVVMTEIQRRQAEVQKMQAEGWALHEQRMNHVDFRLA
Ga0265338_101071393	3300028800	Rhizosphere	VNFEQEIRKLQDTAVVMAEVQRRQAEVQKLQAENVVYMQESMRVHDQRMNHIDMRLAEITDKLDGLIGFMGGYFKGTN
Ga0222749_103441242	3300029636	Soil	VNFEQEIRRLQDTAVVMAEIQRRQAEVQKLQAEGMQLHEQRMAHIDMRLVEITDKLDGLIGFMGGYFKGPH
Ga0222749_104009342	3300029636	Soil	MDFEQEISRLQDTLVVMAEIQRLQADLQRIQAERIIATEEGMKLHEQRMNHIELNLSEISDKLNGLIGFMDGHFRQE
Ga0299906_105746332	3300030606	Soil	MNYEAEINSLKDTLVVMAEIQRRQAEVQRMQAENAAEHEKRMKHVEQTLAEVGDKLNALVDIVDGVIRKPPPDPTAN
Ga0302046_104692282	3300030620	Soil	MNYEAEINSLKDTLVVMAEIQRRQAEVQRMQAETAAEHEKRMKHVEQTLAEVGDKLNALVDIVDGVIRKPPPDPTAN
Ga0316363_101148571	3300030659	Peatlands Soil	VNFEQEIRRLQDTAVVMAEIQRRQAEVQKLQAENVVYMQESMRVHDQRMNHIDMRLAEITDKLDGLIGFMGGYFKGPN
Ga0170834_1003501042	3300031057	Forest Soil	MDFEQEVNQLKDTLVVVAEIQRRQAEIQKMQAERIVATEEGMKLHEQRMNHIELNLSEISDKLNGLIGFMNGYFRKE
Ga0170834_1010609911	3300031057	Forest Soil	MLLWGCMNFEQEINRLQETLVLMAEIQRRQADVQRIQAERIIATEEGMKLHEQRMSHIELNLSEISDKLNGLIGFMDGYFRKE
Ga0170823_125730773	3300031128	Forest Soil	MDFEQEVNQLKDTLVVVAEIQRRQAEIQKMQAERIVATEEGMKLHEQRMNHIELNLSEISYKLNGLIGFMNGYFRKE
Ga0170824_1087266512	3300031231	Forest Soil	MQMNFEQEIKQLQDTAIMMAEIQRRQADVQKLQAENVIYMQESMRVHVQRMDHIDMRLAEITDKLDGLIGFMGGQFHRPQ
Ga0170824_1168200121	3300031231	Forest Soil	VDFGKEIKQLQDTAIVMAEIQRRQAEVQKMQAENIVYTQESMRVHQQRMDHVDMRLAEITDKLDGLIGFMGGQFRGPQ
Ga0302320_101418013	3300031524	Bog	MTFEQEIKQLKDTLIVVSEIQRRQADVQKMQADGMVLHEQCMNHVDMRLAEIADKLNGLIGFIDGQSPRPQ
Ga0302326_127260172	3300031525	Palsa	MNFEQEINQLKDTLIVMAEIQRRQADVQKMQAEGFVLHEQRMSHVDMRLAEIADKLDGLIGFMDGR
Ga0302326_130751232	3300031525	Palsa	MNFEQEINQLKDTLIVVAEIQRRQADVQKMQAEGFVLHEQRMGHVDMRLAEIADKLDGLIGFMDGR
Ga0310686_1038843012	3300031708	Soil	MNFEQAIHQLNDTLIVVAEIQRRQAEIQKDQAEGIATLSERIREGMILHEQRMNHIDMRLAEITDKLDGLIGYMDGQRPN
Ga0307469_110871531	3300031720	Hardwood Forest Soil	MAEIQRRQVEVQKMQAEGFALHEQRMNHIDMRLSEITDKLDGLIAFMNGYFRKE
Ga0302319_102689903	3300031788	Bog	MNFEQEIKQLKDTLIVVSEIQRRQADVQKMQADGMVLHEQRMSHVDMRLAEIADKLNGLIGFIDGQSPRPQ
Ga0307473_107147312	3300031820	Hardwood Forest Soil	MNLEQQVKETLMITEETQRRQAEVQKMQAEGLALHEQRMNHIDMRLAEIADKLDGLIGFMNGYFRK
Ga0307473_115409122	3300031820	Hardwood Forest Soil	AEIQRRQAEIQKMQAEGLAVHEQRMSHIDERLSEITDKLDGLIGFIGGSLGKN
Ga0302322_1010292602	3300031902	Fen	VNFDQEIRKLQDTAIVMAEVQRRQAEVQKLQAENVVYMQESMRVHDQRMNHIDMRLAEITDKLDGLIGFMGGYFKGPN
Ga0307470_108361062	3300032174	Hardwood Forest Soil	MAEIQRRQAEVQKMQAEGFALHEQRMNHIDMRLSEITDKLDGLIGFMNGYFRKE
Ga0348332_137776272	3300032515	Plant Litter	FEQAIVQVQDTLIVMAEVQRRQAEVQTTQAHFLHDLQEGMDLHEKRMKHIDLTLAEIGDKLNGLIGFMGGFFDKPK
Ga0335083_113542582	3300032954	Soil	MNFEQAIVQLQDTLIVVAEIQRRQAEVQKTQAERIAEAEESMRLHKQRMDHIEMNLAEITDKLNGLIGFMDGQHPKQ
Ga0214472_110337391	3300033407	Soil	MNYEAEINSLKDTLVVMAEIQRRQAEVQRMQAENAAEHEKRMKHVEQTLAEVGDKLNALVDIVDGVIRKPPPDPTTN
Ga0314861_0031523_2352_2567	3300033977	Peatland	MNFEQEMNQLKDTLIVVSEIQRRQADVWKMQAEGMALHEQRMNHVDLKLAEITDKLDGLIGFMGGQFGDLQ
Ga0314861_0217855_78_308	3300033977	Peatland	MNFEQAIVQLNDTLIVVAEIRRRQAKIQKMQAEDLAAMREGMRLHEQRMNHIDMRLSEITDKLDGLIGYMDGQRPN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055913

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences