NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F055984

Metagenome Family F055984

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F055984
Family Type Metagenome
Number of Sequences 138
Average Sequence Length 46 residues
Representative Sequence GAGHGALLGTVVAAGPETSFHFVAPNLPRKIVIDPQMTLLCTSE
Number of Associated Samples 107
Number of Associated Scaffolds 138

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 100.00 %
% of genes from short scaffolds (< 2000 bps) 89.13 %
Associated GOLD sequencing projects 95
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (98.551 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(42.754 % of family members)
Environment Ontology (ENVO) Unclassified
(42.754 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.652 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 25.00%    Coil/Unstructured: 75.00%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 138 Family Scaffolds
PF12679ABC2_membrane_2 11.59
PF00005ABC_tran 2.17
PF04055Radical_SAM 0.72
PF11937DUF3455 0.72
PF00591Glycos_transf_3 0.72
PF01381HTH_3 0.72


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms98.55 %
UnclassifiedrootN/A1.45 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001154|JGI12636J13339_1042142All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium578Open in IMG/M
3300001593|JGI12635J15846_10491068All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium726Open in IMG/M
3300002245|JGIcombinedJ26739_101500389Not Available569Open in IMG/M
3300002907|JGI25613J43889_10080319All Organisms → cellular organisms → Bacteria873Open in IMG/M
3300002916|JGI25389J43894_1012537All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1435Open in IMG/M
3300005172|Ga0066683_10171259All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1337Open in IMG/M
3300005175|Ga0066673_10770184All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300005176|Ga0066679_10720417All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium644Open in IMG/M
3300005177|Ga0066690_10537470All Organisms → cellular organisms → Bacteria783Open in IMG/M
3300005186|Ga0066676_10503688All Organisms → cellular organisms → Bacteria822Open in IMG/M
3300005542|Ga0070732_10047773All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter2468Open in IMG/M
3300005554|Ga0066661_10269883All Organisms → cellular organisms → Bacteria1051Open in IMG/M
3300005554|Ga0066661_10768875All Organisms → cellular organisms → Bacteria → Proteobacteria564Open in IMG/M
3300005559|Ga0066700_10191216All Organisms → cellular organisms → Bacteria → Acidobacteria1409Open in IMG/M
3300005569|Ga0066705_10513668All Organisms → cellular organisms → Bacteria748Open in IMG/M
3300005574|Ga0066694_10009101All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter4186Open in IMG/M
3300005610|Ga0070763_10334447All Organisms → cellular organisms → Bacteria839Open in IMG/M
3300005610|Ga0070763_10608886All Organisms → cellular organisms → Bacteria634Open in IMG/M
3300005921|Ga0070766_10857296All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300006031|Ga0066651_10034322All Organisms → cellular organisms → Bacteria2292Open in IMG/M
3300006032|Ga0066696_10318302All Organisms → cellular organisms → Bacteria1012Open in IMG/M
3300006052|Ga0075029_100519076All Organisms → cellular organisms → Bacteria788Open in IMG/M
3300006173|Ga0070716_100806190All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium727Open in IMG/M
3300006176|Ga0070765_100122100All Organisms → cellular organisms → Bacteria2286Open in IMG/M
3300006797|Ga0066659_10078131All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2186Open in IMG/M
3300006797|Ga0066659_11796843All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300007258|Ga0099793_10060115All Organisms → cellular organisms → Bacteria1697Open in IMG/M
3300007258|Ga0099793_10385024All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium688Open in IMG/M
3300007258|Ga0099793_10592916All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300007265|Ga0099794_10651260All Organisms → cellular organisms → Bacteria559Open in IMG/M
3300009038|Ga0099829_10587771All Organisms → cellular organisms → Bacteria925Open in IMG/M
3300009038|Ga0099829_11351339All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300009088|Ga0099830_10719806All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium822Open in IMG/M
3300009089|Ga0099828_10953016All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium765Open in IMG/M
3300009089|Ga0099828_11028987All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium733Open in IMG/M
3300009089|Ga0099828_11047827All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium726Open in IMG/M
3300009089|Ga0099828_11990772All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium508Open in IMG/M
3300009090|Ga0099827_10399881All Organisms → cellular organisms → Bacteria1174Open in IMG/M
3300009090|Ga0099827_10693725All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300009090|Ga0099827_10873518All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium779Open in IMG/M
3300009143|Ga0099792_11096373All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium536Open in IMG/M
3300009174|Ga0105241_11919804All Organisms → cellular organisms → Bacteria581Open in IMG/M
3300009177|Ga0105248_10201878All Organisms → cellular organisms → Bacteria2240Open in IMG/M
3300009545|Ga0105237_10274690All Organisms → cellular organisms → Bacteria1688Open in IMG/M
3300010303|Ga0134082_10126812All Organisms → cellular organisms → Bacteria1022Open in IMG/M
3300010360|Ga0126372_13121912All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300010361|Ga0126378_12360284All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300011269|Ga0137392_10442597All Organisms → cellular organisms → Bacteria1079Open in IMG/M
3300011269|Ga0137392_10798954All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium779Open in IMG/M
3300011271|Ga0137393_11130048All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium666Open in IMG/M
3300011271|Ga0137393_11142708All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium662Open in IMG/M
3300012189|Ga0137388_10587579All Organisms → cellular organisms → Bacteria1035Open in IMG/M
3300012189|Ga0137388_11046717All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium752Open in IMG/M
3300012202|Ga0137363_10577227All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300012202|Ga0137363_11642742All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium535Open in IMG/M
3300012203|Ga0137399_10047074All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3106Open in IMG/M
3300012203|Ga0137399_10323698All Organisms → cellular organisms → Bacteria1277Open in IMG/M
3300012203|Ga0137399_10348672All Organisms → cellular organisms → Bacteria1229Open in IMG/M
3300012205|Ga0137362_10278040All Organisms → cellular organisms → Bacteria1448Open in IMG/M
3300012206|Ga0137380_10519984All Organisms → cellular organisms → Bacteria1047Open in IMG/M
3300012206|Ga0137380_11251304All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium627Open in IMG/M
3300012361|Ga0137360_10608516All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300012363|Ga0137390_10288663All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1624Open in IMG/M
3300012363|Ga0137390_11681171All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium570Open in IMG/M
3300012363|Ga0137390_11704471All Organisms → cellular organisms → Bacteria564Open in IMG/M
3300012582|Ga0137358_10900092All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300012683|Ga0137398_10151295All Organisms → cellular organisms → Bacteria1506Open in IMG/M
3300012685|Ga0137397_10269214All Organisms → cellular organisms → Bacteria1269Open in IMG/M
3300012685|Ga0137397_10935699All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium641Open in IMG/M
3300012685|Ga0137397_11085545All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium584Open in IMG/M
3300012923|Ga0137359_10407898All Organisms → cellular organisms → Bacteria1205Open in IMG/M
3300012924|Ga0137413_10605609All Organisms → cellular organisms → Bacteria820Open in IMG/M
3300012925|Ga0137419_10676725All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300012925|Ga0137419_11013742All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium688Open in IMG/M
3300012927|Ga0137416_10381310All Organisms → cellular organisms → Bacteria1190Open in IMG/M
3300012929|Ga0137404_11204244All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium697Open in IMG/M
3300012975|Ga0134110_10007497All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4090Open in IMG/M
3300015242|Ga0137412_10533511All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium895Open in IMG/M
3300015264|Ga0137403_10731986All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300018007|Ga0187805_10088136All Organisms → cellular organisms → Bacteria1401Open in IMG/M
3300018058|Ga0187766_11302974All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300018468|Ga0066662_11798248All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium641Open in IMG/M
3300020006|Ga0193735_1141699All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium634Open in IMG/M
3300020170|Ga0179594_10011565All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2476Open in IMG/M
3300020170|Ga0179594_10241026All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium681Open in IMG/M
3300020579|Ga0210407_10732581All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium765Open in IMG/M
3300020580|Ga0210403_10175878All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1754Open in IMG/M
3300020583|Ga0210401_10284315All Organisms → cellular organisms → Bacteria1514Open in IMG/M
3300021086|Ga0179596_10041860All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1847Open in IMG/M
3300021168|Ga0210406_10255918All Organisms → cellular organisms → Bacteria1435Open in IMG/M
3300021170|Ga0210400_10086880All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2463Open in IMG/M
3300021178|Ga0210408_10994464All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium649Open in IMG/M
3300021401|Ga0210393_11591501All Organisms → cellular organisms → Bacteria518Open in IMG/M
3300021478|Ga0210402_11939633All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300021479|Ga0210410_10292307All Organisms → cellular organisms → Bacteria1462Open in IMG/M
3300024179|Ga0247695_1070343All Organisms → cellular organisms → Bacteria521Open in IMG/M
3300024227|Ga0228598_1134692All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300024284|Ga0247671_1002446All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia3835Open in IMG/M
3300026277|Ga0209350_1028465All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1679Open in IMG/M
3300026285|Ga0209438_1116795All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium762Open in IMG/M
3300026300|Ga0209027_1220504All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300026333|Ga0209158_1319309All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium536Open in IMG/M
3300026469|Ga0257169_1008960All Organisms → cellular organisms → Bacteria1240Open in IMG/M
3300026481|Ga0257155_1034120All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium766Open in IMG/M
3300026499|Ga0257181_1036567All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium786Open in IMG/M
3300026551|Ga0209648_10190469All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis1577Open in IMG/M
3300026555|Ga0179593_1234946All Organisms → cellular organisms → Bacteria2437Open in IMG/M
3300027562|Ga0209735_1085589All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium685Open in IMG/M
3300027645|Ga0209117_1062102All Organisms → cellular organisms → Bacteria1081Open in IMG/M
3300027674|Ga0209118_1020961All Organisms → cellular organisms → Bacteria2083Open in IMG/M
3300027701|Ga0209447_10032398All Organisms → cellular organisms → Bacteria1456Open in IMG/M
3300027846|Ga0209180_10141130All Organisms → cellular organisms → Bacteria1386Open in IMG/M
3300027855|Ga0209693_10405668Not Available658Open in IMG/M
3300027862|Ga0209701_10133764All Organisms → cellular organisms → Bacteria1526Open in IMG/M
3300027862|Ga0209701_10296383All Organisms → cellular organisms → Bacteria930Open in IMG/M
3300027862|Ga0209701_10592305All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium589Open in IMG/M
3300027875|Ga0209283_10976486All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium507Open in IMG/M
3300027879|Ga0209169_10152863All Organisms → cellular organisms → Bacteria1202Open in IMG/M
3300027882|Ga0209590_10622778All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium694Open in IMG/M
3300027884|Ga0209275_10274344All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium931Open in IMG/M
3300027903|Ga0209488_10294572All Organisms → cellular organisms → Bacteria1212Open in IMG/M
3300027915|Ga0209069_10397121All Organisms → cellular organisms → Bacteria755Open in IMG/M
3300028047|Ga0209526_10866175All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium553Open in IMG/M
3300028536|Ga0137415_10277533All Organisms → cellular organisms → Bacteria1481Open in IMG/M
3300028536|Ga0137415_10388728All Organisms → cellular organisms → Bacteria1199Open in IMG/M
3300028906|Ga0308309_10078250All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis2491Open in IMG/M
3300028906|Ga0308309_11046109All Organisms → cellular organisms → Bacteria706Open in IMG/M
3300031128|Ga0170823_10190576All Organisms → cellular organisms → Bacteria563Open in IMG/M
3300031679|Ga0318561_10771458All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300031720|Ga0307469_10526419All Organisms → cellular organisms → Bacteria1042Open in IMG/M
3300031720|Ga0307469_10671748All Organisms → cellular organisms → Bacteria936Open in IMG/M
3300031740|Ga0307468_102373440All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300031823|Ga0307478_10031349All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis3836Open in IMG/M
3300031833|Ga0310917_10338431All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300031962|Ga0307479_10412198All Organisms → cellular organisms → Bacteria1336Open in IMG/M
3300031962|Ga0307479_10637718All Organisms → cellular organisms → Bacteria1046Open in IMG/M
3300031962|Ga0307479_12089070All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300032180|Ga0307471_103657344All Organisms → cellular organisms → Bacteria544Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil42.75%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil11.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil10.14%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil6.52%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.80%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil5.07%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.07%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.45%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.45%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.45%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.45%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.72%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.72%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.72%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.72%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.72%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.72%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.72%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.72%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.72%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.72%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001154Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300002916Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cmEnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005175Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122EnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005574Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300015242Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021178Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-MEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300024179Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK36EnvironmentalOpen in IMG/M
3300024227Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4Host-AssociatedOpen in IMG/M
3300024284Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK12EnvironmentalOpen in IMG/M
3300026277Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026285Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026469Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-BEnvironmentalOpen in IMG/M
3300026481Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-AEnvironmentalOpen in IMG/M
3300026499Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-BEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026555Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300027562Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027645Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027701Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027862Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027879Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027884Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028906Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)EnvironmentalOpen in IMG/M
3300031128Oak Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031679Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12636J13339_104214223300001154Forest SoilTFLSTVVAAGPETSFHFFTLMPPRKIVIDPHMTLLCTTE*
JGI12635J15846_1049106813300001593Forest SoilSGTGHSALLGTVVAAGPETSFHFVAPNLPRKIVIDPQLTLLCTSE*
JGIcombinedJ26739_10150038923300002245Forest SoilYAGANAAHATLLGTVVAAGPETSFHFTTQTEPHKILIDPQMTLLCVTQ*
JGI25613J43889_1008031913300002907Grasslands SoilGTLLGTVVAAGPETSFHFDTPNLPRKIVVDPQMTLLCTSE*
JGI25389J43894_101253733300002916Grasslands SoilYGTFLGTVAAAGLETAFQFVVAVPPHKIVVDPRMTLLCTSE*
Ga0066683_1017125913300005172SoilGAAGHNTFLGTVVAAGPETSFNFLTPNLPHKIVIDPHMTLLCTTE*
Ga0066673_1077018413300005175SoilVPRSFIASVPLYAAGPGHGTLLGTVVAAGPETTFQFVATVPPHKIVVDPRMTLLCTSE*
Ga0066679_1072041713300005176SoilGAFLVTVVAAGPETSFQFVAPNLPHKIVVDPQMTLLCTWE*
Ga0066690_1053747023300005177SoilVPLYAAGAGYGALLGTVVTAGPETPFQFVTTVPAHKIVVDPRMTLLCTSE*
Ga0066676_1050368823300005186SoilIARVPLYSSGAGRGTLLGTVVAAGPETSFHFDAPNLPRKIIVDPQMTLLCTAE*
Ga0070732_1004777343300005542Surface SoilLGVVTAAGPETSFHFTAEAPPHKIIIDPQMTLLCVAE*
Ga0066661_1026988323300005554SoilGHGTLLGTVVAAGPETSFHFDTPNLPRKIVVDPQMTLLCTSE*
Ga0066661_1076887533300005554SoilSVITDGPETSFHFITKTPPRKIVIDPQMTLLCVSE*
Ga0066700_1019121613300005559SoilYAAGAGYGTLLGTVVTAGPETPFQFVTTVPPHKIVIDPRMTLLCASE*
Ga0066705_1051366823300005569SoilLLGTVVTAGPETPFQFVTTVPPHKIVIDPRMTLLCASE*
Ga0066694_1000910113300005574SoilVVAAGPETTFQFVATVPPHKIVVDPRMTLLCTSE*
Ga0070763_1033444713300005610SoilGSTAGHSTYLGTVVASGPETPFHFISKTDPHKIIIDPQMTLLCVTQ*
Ga0070763_1060888623300005610SoilNVFLGAVIAASPETSFQFVTQLPPHKLVIDPQMTLLCTTE*
Ga0070766_1085729623300005921SoilTLLGVVVASGPETSFHFTTPAEPHKILIDPQMTLLCVTQ*
Ga0066651_1003432213300006031SoilGHGAFLVTVVAAGPETSFQFVAPSLPRKIVVDPQMTLLCTSE*
Ga0066696_1031830213300006032SoilFIASVPLYAAGPGHGTLLGTVVAAGPETTFQFVATVPPHKIVVDPRMTLLCTSE*
Ga0075029_10051907613300006052WatershedsLLGTVIAAGPETPFHFDTQNPTRKIVVDPQMTLLCTSE*
Ga0070716_10080619023300006173Corn, Switchgrass And Miscanthus RhizosphereGVPRSFIARVPLYSSGAEHGTLLGTVVAAGPETPFHFDTPILPRKIVVDPQMTLLCTSE*
Ga0070765_10012210013300006176SoilTLLGVVVASGPETSFHFITPAEPHKILIDPQMTLLCVTP*
Ga0066659_1007813113300006797SoilSVPLYASGAGHGSFLGVVQASGPETSFHFVAPNPPRKIIVDPQMTLLCTSE*
Ga0066659_1179684323300006797SoilLYSGGAGHGVLLGTVVTAGPETSFHFVVPTPPRKIVVDPRMTLLCTSE*
Ga0099793_1006011513300007258Vadose Zone SoilALLGTVVAAGRETSFHFVVPIPPRKIVVDPRMTLLCTSE*
Ga0099793_1038502423300007258Vadose Zone SoilVPLYSGGAGHGALLGTVVAAGPETSFHFVAPNLPRKIVIDPQMTLLCTSE*
Ga0099793_1059291623300007258Vadose Zone SoilLLGTVVAAGRETSFHFVVPIPPRKIVVDPRMTLLCISE*
Ga0099794_1065126013300007265Vadose Zone SoilSVPLYSGGAGHGALLGTVVAAGRETSFHFVVPIPPRKIVVDPRMTLLCISE*
Ga0099829_1058777123300009038Vadose Zone SoilLYSSGAGHGTLLGTVVAAGPETSFHFDTPNLPRKIVVDPQMTLLCTSE*
Ga0099829_1135133913300009038Vadose Zone SoilLYSGGGAGRNTFLSTVVAAGPETSFHFLTPTSPQKIVIDPQMTLLCTAE*
Ga0099830_1071980623300009088Vadose Zone SoilSFIASVPLYAGGAGHSALLGLVVAAGPETSFHFVAPSLPHKIVVDPHMTLLCTSE*
Ga0099828_1095301623300009089Vadose Zone SoilGAGHGALLGTVVAAGPETSFHFVAPTLPHKIVVDPQMTLLCTSE*
Ga0099828_1102898713300009089Vadose Zone SoilLGTVVAAGPETSFHFVAPTLPHKIVVDPRMTLLCTSE*
Ga0099828_1104782713300009089Vadose Zone SoilLYAGGAGHSTLLGAVVAAGPETSFHFVTTNLPHKIVVDPQMTLLCTSE*
Ga0099828_1199077223300009089Vadose Zone SoilAGHGTLLGTVVAAGPETSFHFDTPILTRKIVVDPQMTLLCTSE*
Ga0099827_1039988133300009090Vadose Zone SoilGVPLYAGTAGHNTFLGTVVAAGPETSFHFLTPNLPHKIVIDPHMTLLCASE*
Ga0099827_1069372523300009090Vadose Zone SoilNVPRSFIASVPLYSGGGAGRNTFLSTVVAAGPETSFQFLTPTSPQKIVIDPQMTLLCTAE
Ga0099827_1087351813300009090Vadose Zone SoilPRSFVASVPLYASGAGHSALLGTVVAAGEETSFHFVAPNLPRKIVIDPQMTLLCTSE*
Ga0099792_1109637313300009143Vadose Zone SoilPLYAGGAGHSALLGTVVAAGQETSFHFVSPNLPRKIVIDPQMTLLCTSE*
Ga0105241_1191980413300009174Corn RhizosphereGSGHHVFLGDVVAAGPETSFHFVTKTPPQKLVIDAQMTLLCTSQ*
Ga0105248_1020187843300009177Switchgrass RhizosphereASGPETSFHFMSSPQPQKILIDPQMTLLCVTPNQ*
Ga0105237_1027469033300009545Corn RhizosphereVVASGAETSFHFISKTDPRKIVIDPQMTLLCVTQ*
Ga0134082_1012681223300010303Grasslands SoilVPRSFVASVPLYASGAGHSALLGTVVAAGEETSFHFVAPNLPRKIVIDPQLTLLCTSE*
Ga0126372_1312191213300010360Tropical Forest SoilTGTSGRSFLGNVVAGGPETSFHFRTSSLPRKILIDPQMTLLCTTE*
Ga0126378_1236028413300010361Tropical Forest SoilNTGSGHDVLLGTVVAAGRETTFHFAVQTAPRKIVIDPQLTLLCATE*
Ga0137392_1044259713300011269Vadose Zone SoilPVPLYANTGAGHLAELGIVVAAGSETTFHFTTQTAPRKIVVDPHMTLLCTSE*
Ga0137392_1079895413300011269Vadose Zone SoilRSFVASVPLYSGGAGHGALLGTVVAAGPETSFHFVAPNLPRKIVIDPQMTLLCTSE*
Ga0137393_1113004813300011271Vadose Zone SoilTGVPRSFVARVPLHAGGAGHGALLGTVVAAGPETSFHFVAPTLPHKIVVDPQMTLLCTSE
Ga0137393_1114270823300011271Vadose Zone SoilRSFIARVPLYSGGAGHGTLLGTVVVAGPETSFHFDTPNLTRKIVVDPQMTLLCTSE*
Ga0137388_1058757923300012189Vadose Zone SoilPRSFIARVPLYSSGAGHGTLLGTVVAAGPETSFHFDTPNLTRKIIIDPQMTLLCTSE*
Ga0137388_1104671723300012189Vadose Zone SoilARVPLHAGGAGHGALLGTVVAAGPETSFHFVAPTLPHKIVVDPQMTLLCTSE*
Ga0137363_1057722713300012202Vadose Zone SoilRALLGNVVAAGPETSFHFLSAIQPRKLIIDPQMTLLCVPE*
Ga0137363_1164274223300012202Vadose Zone SoilHGTLLGTVVAAGPETSFHFDTPNLPRKIVVDPQMTLLCTSE*
Ga0137399_1004707443300012203Vadose Zone SoilFIANVPLYAAGAGHGTFLGAVVASGPETPFHFVAESALRRITVDPQMTLLCTSE*
Ga0137399_1032369833300012203Vadose Zone SoilLLGSVVVAGPETSFHFVTPTQPRKIIIDPQMTLLCVPE*
Ga0137399_1034867213300012203Vadose Zone SoilTVVAAGRETSFHFVVPIPPRKIVVDPRMTLLCTSE*
Ga0137362_1027804013300012205Vadose Zone SoilAGHNTFLGTVVTAGPETSFHFLTPNLPHKIVIDPHMTLLCATE*
Ga0137380_1051998423300012206Vadose Zone SoilLYAAGAGHGALLGTVVAAGPETTFHFVVPTPPRKIVVDPQMTLLCTSE*
Ga0137380_1125130423300012206Vadose Zone SoilAGVPLYAGTAGHNTFLGTVVAAGPETSFHFLTPNLPHKIVIDPHMTLLCTTE*
Ga0137360_1060851613300012361Vadose Zone SoilPLYSSGAGHGTLLGTVVAAGPETSFHFDTPNLPRKIVVDPQMTLLCTSE*
Ga0137390_1028866313300012363Vadose Zone SoilLYASGGSGGRALLGSVVAAGPETSFHFLTPTQPRKIIIDPQMTLLCVPE*
Ga0137390_1168117123300012363Vadose Zone SoilYAAGAGHGTFLGAVVASGPETPFHFVAESALRKITVDPQMTLLCTSE*
Ga0137390_1170447113300012363Vadose Zone SoilSVPLYSGGAGHGALLGTVVAAGAETPFHFVVPIPPRKIVVDPRMTLLCTSE*
Ga0137358_1090009223300012582Vadose Zone SoilYASGGSGTKALLGSVVAAGPETSFHFLTPTQPRKIIIDPQMTLLCVPE*
Ga0137398_1015129513300012683Vadose Zone SoilGHGTLLGTVVAAGPETSFHFDTPNLPRKIVVDPQMTLLCTLE*
Ga0137397_1026921413300012685Vadose Zone SoilGAGHGSLLGTVIAAGPATSFHFETQNPPRNIVVDPHMTVLCTSE*
Ga0137397_1093569923300012685Vadose Zone SoilLGTVVAAGPETSFHFVAPNLPRKIVIDPQMTLLCTSE*
Ga0137397_1108554513300012685Vadose Zone SoilAGTRALLGNVVAAAPETSFHFLSPIQPHKLIIDPQMTLLCVPE*
Ga0137359_1040789813300012923Vadose Zone SoilSGSRALLGNVVAAGPETSFHFLSPIQPRKLIIDPHMTLLCVSE*
Ga0137413_1060560913300012924Vadose Zone SoilTLLGTVVAAGPETSFHFDTPNLPRKIVVDPQMTLLCTSE*
Ga0137419_1067672513300012925Vadose Zone SoilVCSHISTLLGQVVTSGEETSFQFVTAALPKRLLIDPQMTLLC
Ga0137419_1101374213300012925Vadose Zone SoilVVAAGEETSFHFVAPNLPRKIVIDPQLTLLCTSE*
Ga0137416_1038131023300012927Vadose Zone SoilFIASVPLYATGAGHGALLGTVVTAGPETAFQFVATVPPHKIVVDPRMTLLCVSE*
Ga0137404_1120424413300012929Vadose Zone SoilAAGAGHGTFLGAVVASGPETPFHFVAESALRKITVDPRMTLLCTSE*
Ga0134110_1000749753300012975Grasslands SoilRLFLGNVVAGGPETSFRFHTSGPPRKILIDPQMTLLCTTE*
Ga0137412_1053351113300015242Vadose Zone SoilSVPLYSGGAGHGALLGTVVAAGPETSFHFVAPNLPRKIVIDPQMTLLCTSE*
Ga0137403_1073198623300015264Vadose Zone SoilGAGHGTFLGAVVASGPETPFHFVAESALRKITVDPRMTLLCTSE*
Ga0187805_1008813613300018007Freshwater SedimentVVVATGPETSFHFTTQIEPHKIIVDPQMTLLCVTQ
Ga0187766_1130297413300018058Tropical PeatlandFIASVPLYANTGTGHNVYLGVVVAAGPETSFHFLTKVAPQKLVIDPQMTLLCTAEQNEKTDEDSN
Ga0066662_1179824813300018468Grasslands SoilLGTVVAAGPETSFHFDTPILTRKIVVDPQMTLLCTSE
Ga0193735_114169913300020006SoilVASVPLYASGAGHRALLGTVVAAGEETSFHFVAPNLPRKIVIDPQMTLLCTSE
Ga0179594_1001156513300020170Vadose Zone SoilAAHATFLGVVVAAGPETSFHFTTPTEPHKILIDPQMTLLCVTP
Ga0179594_1024102623300020170Vadose Zone SoilVPLYASGAGHSALLGTVVAAGEETSFHFVAPNLPRKIVIDSQMTLLCTSE
Ga0210407_1073258123300020579SoilHGTLLGTVIAAGPETSFHFETQNPPRKIVVDPQMTLLCTSE
Ga0210403_1017587833300020580SoilNAFLGAVVGVGPETSFQFLTPTRPSKIIIDPQMTLLCTTE
Ga0210401_1028431533300020583SoilSGHNVFLGTVVAAGPETSFHFTAQIAPRKLVIDPQMTLLCTTEQTEKTQEGTN
Ga0179596_1004186013300021086Vadose Zone SoilGGAGHSALLGTVVAAGQETSFHFVSPNLPRKIVIDPQMTLLCTSE
Ga0210406_1025591813300021168SoilTVIAAGPETHFHFDTQNLTRKIVVDPQMTLLCTSE
Ga0210400_1008688013300021170SoilTGANPAHATLLGVVVASGPETSFHFITPAEPHKILIDPQMTLLCVTP
Ga0210408_1099446423300021178SoilGHGTLLGTVLAAGPETSFHLETPILPRKIVVDPQMTLLCNSE
Ga0210393_1159150123300021401SoilSFITSVPLYANNGSGHNVFLGAVIAASPETSFQFVTQLPPHKLVIDPQMTLLCTTE
Ga0210402_1193963323300021478SoilPVPLYASAGVGHSAPLGIVVAAGAETSFHFTTPTAPHKIVIDPQMTLLCTTP
Ga0210410_1029230733300021479SoilYANLGSGHNIFLGGVVAASPETSFHFVTPLPAHKLVIDPQMTLLCTTE
Ga0247695_107034313300024179SoilYFITRVPLYAHHGSGHNDFLGDVVAAGPETSFHFVTKIPPQKLVIDAQMTLLCTTE
Ga0228598_113469223300024227RhizosphereAFLGAVVAAGPETSFHFTTQIAPHKLVIDPQMTLLCTTEHTEKTQE
Ga0247671_100244653300024284SoilSGHHVFLGDVVAAGPETSFHFVTKTPPQKLVIDAQMTLLCTSQ
Ga0209350_102846533300026277Grasslands SoilLYAAGAGHGAFLVTVVAAGPETSFQFIAPNLPRKIVVDPQMTLLCTWE
Ga0209438_111679513300026285Grasslands SoilYSGGAGHGSLLGTVIAAGPETSFHFETQNPPRKIVVDPQMTLLCTSE
Ga0209027_122050423300026300Grasslands SoilAGYGTLLGTVAAAGLETAFQFVAAVPPHKIVVDPRMTLLCTSE
Ga0209158_131930913300026333SoilPLYSSGAGGTLLGTVVAAGPETSFHFDTPNLPRKIVVDPHMTLLCTSQ
Ga0257169_100896013300026469SoilGVGAGTRALLGNVVAAGPETSFHFLSPIQPRRLIIDPQMTLLCVPE
Ga0257155_103412023300026481SoilTGVPRSFIARVPLYSGGAGRGALLGTVIAAGPETNFHFDTQNLTRKIVVDPQMTLLCTSE
Ga0257181_103656713300026499SoilLLGTVVAAGPETSFHFVAPNLPRKIVIDPQMTLLCTSE
Ga0209648_1019046933300026551Grasslands SoilNGSGHNIFLGAVVAAGPETSFHFTTQVPPHKLVIDPQMTLLCTTSQTEKTEE
Ga0179593_123494613300026555Vadose Zone SoilVPLYSGGAGHGALLGTVVAAGRETSFHFVVPIPPRKIVVDPRMTLLCISE
Ga0209735_108558913300027562Forest SoilGALLGTVVAAGPETSFHFVAPNLPRKIVIDPQMTLLCTSE
Ga0209117_106210223300027645Forest SoilLGTVVAAGTETSFHFVAPNLPRKIVIDPQMTLLCTSE
Ga0209118_102096113300027674Forest SoilGAGHGALLGTVVAAGPETSFHFVAPNLPRKIVIDPQMTLLCTSE
Ga0209447_1003239813300027701Bog Forest SoilAGHNVFLGAVVAAGPETSFHFTTQIAPHKLVIDPQMTLLCTTEQTEKTQE
Ga0209180_1014113033300027846Vadose Zone SoilGGGAGRNTFLSTVVAAGPETSFHFLTPTSPQKIVIDPQMTLLCTAE
Ga0209693_1040566823300027855SoilGSTAGHSTYLGTVVASGPETPFHFISKTDPHKIIIDPQMTLLCVTQ
Ga0209701_1013376433300027862Vadose Zone SoilRSFIASVPLYAGGAGHGALLGTVVAAGPETSFHFVAPTLPHKIVVDPQMTLLCTSE
Ga0209701_1029638313300027862Vadose Zone SoilLGAVVAAGPETSFHFVAPTLPHKIVVDPQMTLLCTSE
Ga0209701_1059230513300027862Vadose Zone SoilTRVPRSFIAGVPLYAGAAGHNTFLGTVVAAGPETSFHFLTPNLPHKIVIDPHMTLLCTTE
Ga0209283_1097648613300027875Vadose Zone SoilGTVVAAGPETPFHFDIPNLPRKIVVDPQMTLLCTSE
Ga0209169_1015286313300027879SoilNVFLGVVVAAGPETSFHLTTQGPVHKIVIDPQMTLLCTTEQTEKTPE
Ga0209590_1062277813300027882Vadose Zone SoilAGHNTFLGTVVAAGPETSFHFLTPNLPHKIVIDPHMTLLCASE
Ga0209275_1027434423300027884SoilVPLYASTVGHTIYLGTVVASGPETSFHFLSKIDPRKIVIDPQLTLLCVIQ
Ga0209488_1029457233300027903Vadose Zone SoilHLVELGIVVAAGSETTFHFTTQTAPRKIVVDPRMTLLCTSE
Ga0209069_1039712113300027915WatershedsSFIARVPLYAAGAGHGTLLGTVIAAGPETSFHFDTQNPPRKIIVDPQMTLLCTSE
Ga0209526_1086617513300028047Forest SoilSAGSRTFLGAVVAAGPETSFHFLAPAPPRKIVIDPQLTLLCTSE
Ga0137415_1027753313300028536Vadose Zone SoilYSGGAGHSTLFGTVVAAGPETSFHFDTPILTRKIVVDPQMTLLCTSE
Ga0137415_1038872813300028536Vadose Zone SoilFIASVPLYATGAGHGALLGTVVTAGPETAFQFVATVPPHKIVVDPRMTLLCVSE
Ga0308309_1007825043300028906SoilPVPLYTGATPAHATLLGVVVASGPETSFHFITPAEPHKILIDPQMTLLCVTP
Ga0308309_1104610923300028906SoilGTVVASGPETSFHFLSKIDPRKIVIDPQLTLLCVTQ
Ga0170823_1019057613300031128Forest SoilNNGSGHIIFLGEVVAAGPETSFHFITQAPPHKLVIDPQMTLLCTTE
Ga0318561_1077145813300031679SoilGTGGRWFLGHVVAAGPETSFRFHAASPPRKILIDPRMTLLCTTE
Ga0307469_1052641913300031720Hardwood Forest SoilTFLGVVVAAGPETSFHFATQTEPHKILIDPQMTLLCVTP
Ga0307469_1067174813300031720Hardwood Forest SoilSGVPRSFIASVPLYAGGGSGTRSLIGNVVAAGPETSFHFLSPIQPRKIVVDPQMTLLCVS
Ga0307468_10237344023300031740Hardwood Forest SoilVPLYASGGSGIRALLGNVVAAGPETSFHFLSPIQPRKLIIDPQMTLLCVPE
Ga0307478_1003134953300031823Hardwood Forest SoilNVPLYTSGGAVLNAFLGAVVAVGPETSFHFLTPTRPSKIIIDPQMTLLCTTE
Ga0310917_1033843113300031833SoilWFLGHVVAAGPETSFRFHAASPPRKILIDPRMTLLCTTE
Ga0307479_1041219813300031962Hardwood Forest SoilHRVLLGSVIASGPETPFQFLTPDAPRRILIDPQMTLLCTAE
Ga0307479_1063771813300031962Hardwood Forest SoilPHSFIANVPLYAAAAGHGVLLGTVVAAGPETKFQFVATVPPHKIVVDSRMTLLCTSE
Ga0307479_1208907013300031962Hardwood Forest SoilGSGHNVYLGAVVAAGPETSFHFVTQVPPHKLVIDPQMTILCTTE
Ga0307471_10365734423300032180Hardwood Forest SoilPVPLYASVGAGRAIPLGVVVAAGPETSFHFTTQNAPRKIVIDPQMTLLCVTQ

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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