Metagenome / Metatranscriptome Family F055986

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055986
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	67 residues
Representative Sequence	METSAQAQSASDRYLQIASPIHTILVLAALGGWAIWHKSFADQLSTAANPNRVRFYIVTLFY
Number of Associated Samples	115
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	86.99 %
% of genes near scaffold ends (potentially truncated)	86.23 %
% of genes from short scaffolds (< 2000 bps)	78.99 %
Associated GOLD sequencing projects	109
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (50.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (14.493 % of family members)
Environment Ontology (ENVO)	Unclassified (22.464 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.116 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 63.33% β-sheet: 0.00% Coil/Unstructured: 36.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF12732	YtxH	4.35
PF07859	Abhydrolase_3	2.90
PF02371	Transposase_20	2.17
PF01047	MarR	2.17
PF00903	Glyoxalase	1.45
PF04972	BON	1.45
PF11154	DUF2934	1.45
PF00589	Phage_integrase	1.45
PF14137	DUF4304	1.45
PF09095	AmyA-gluTrfs_C	1.45
PF02517	Rce1-like	1.45
PF06386	GvpL_GvpF	1.45
PF01464	SLT	1.45
PF01434	Peptidase_M41	0.72
PF08238	Sel1	0.72
PF13495	Phage_int_SAM_4	0.72
PF00072	Response_reg	0.72
PF08401	ArdcN	0.72
PF00106	adh_short	0.72
PF13847	Methyltransf_31	0.72
PF01145	Band_7	0.72
PF02775	TPP_enzyme_C	0.72
PF03050	DDE_Tnp_IS66	0.72
PF06831	H2TH	0.72
PF13565	HTH_32	0.72
PF05163	DinB	0.72
PF00754	F5_F8_type_C	0.72
PF02803	Thiolase_C	0.72
PF03328	HpcH_HpaI	0.72
PF11964	SpoIIAA-like	0.72
PF03706	LPG_synthase_TM	0.72
PF01022	HTH_5	0.72
PF12704	MacB_PCD	0.72
PF02687	FtsX	0.72
PF08240	ADH_N	0.72
PF04366	Ysc84	0.72
PF11638	DnaA_N	0.72
PF03466	LysR_substrate	0.72
PF03358	FMN_red	0.72
PF06827	zf-FPG_IleRS	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	2.90
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.17
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	1.45
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	1.45
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	0.72
COG0266	Formamidopyrimidine-DNA glycosylase	Replication, recombination and repair [L]	0.72
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.72
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.72
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	0.72
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.72
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.72
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.72
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	0.72
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	50.00 %
Unclassified	root	N/A	50.00 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	26.09 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	5.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.90 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.97 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	7.25 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	5.07 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.72 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.97 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.52 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	5.07 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.72 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.72 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.72 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.97 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.80 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.07 %
Alphaproteobacteria bacterium ADurb.BinA280	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.BinA280	0.72 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.72 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	0.72 %
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	0.72 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.07 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	0.72 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.72 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	0.72 %
Rhodanobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter	0.72 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.72 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.72 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.72 %
Alphaproteobacteria bacterium ADurb.BinA280	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.BinA280	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.07 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.72 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.72 %
unclassified Rhodanobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter	0.72 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.72 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.72 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	0.72 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.72 %
Alphaproteobacteria bacterium ADurb.BinA280	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.BinA280	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.07 %
Rhodanobacter sp. MP7CTX1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. MP7CTX1	0.72 %
unclassified Chitinophagaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae	0.72 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.72 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.72 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.72 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.72 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.72 %
Alphaproteobacteria bacterium ADurb.BinA280	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.BinA280	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	50.00 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.97 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	5.07 %
Chitinophagaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	0.72 %
Rhodanobacter sp. MP7CTX1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. MP7CTX1	0.72 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.72 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.72 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	0.72 %
Edaphobacter modestus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	0.72 %
Terriglobales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	0.72 %
Alphaproteobacteria bacterium ADurb.BinA280	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.BinA280	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001137\|JGI12637J13337_1002538	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1500	Open in IMG/M
3300001145\|JGI12682J13319_1002498	All Organisms → cellular organisms → Bacteria	1909	Open in IMG/M
3300001593\|JGI12635J15846_10171642	All Organisms → cellular organisms → Bacteria	1464	Open in IMG/M
3300001593\|JGI12635J15846_10870948	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300002245\|JGIcombinedJ26739_100252222	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1652	Open in IMG/M
3300002908\|JGI25382J43887_10130371	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1298	Open in IMG/M
3300004080\|Ga0062385_10644254	Not Available	676	Open in IMG/M
3300005172\|Ga0066683_10164999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1363	Open in IMG/M
3300005447\|Ga0066689_10887543	Not Available	551	Open in IMG/M
3300005536\|Ga0070697_100647231	All Organisms → cellular organisms → Bacteria	931	Open in IMG/M
3300005537\|Ga0070730_10438059	Not Available	843	Open in IMG/M
3300005554\|Ga0066661_10507950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	728	Open in IMG/M
3300005555\|Ga0066692_10505984	Not Available	768	Open in IMG/M
3300005556\|Ga0066707_10801190	Not Available	582	Open in IMG/M
3300005568\|Ga0066703_10825656	Not Available	529	Open in IMG/M
3300005575\|Ga0066702_10112265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1572	Open in IMG/M
3300005587\|Ga0066654_10044015	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1938	Open in IMG/M
3300005602\|Ga0070762_10078454	Not Available	1873	Open in IMG/M
3300006173\|Ga0070716_101088524	All Organisms → cellular organisms → Bacteria → Acidobacteria	637	Open in IMG/M
3300006176\|Ga0070765_101263688	Not Available	697	Open in IMG/M
3300006796\|Ga0066665_11587242	Not Available	514	Open in IMG/M
3300006797\|Ga0066659_10630196	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300006800\|Ga0066660_10162434	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1667	Open in IMG/M
3300009089\|Ga0099828_11692765	Not Available	556	Open in IMG/M
3300009143\|Ga0099792_10621015	All Organisms → cellular organisms → Bacteria → Acidobacteria	691	Open in IMG/M
3300009628\|Ga0116125_1211746	Not Available	554	Open in IMG/M
3300009683\|Ga0116224_10648869	Not Available	505	Open in IMG/M
3300009698\|Ga0116216_10650231	Not Available	634	Open in IMG/M
3300010323\|Ga0134086_10058848	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1313	Open in IMG/M
3300010325\|Ga0134064_10281553	Not Available	627	Open in IMG/M
3300010341\|Ga0074045_10862901	Not Available	572	Open in IMG/M
3300010341\|Ga0074045_10884692	Not Available	564	Open in IMG/M
3300010343\|Ga0074044_10695202	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300011271\|Ga0137393_11632212	Not Available	534	Open in IMG/M
3300012096\|Ga0137389_11239801	Not Available	638	Open in IMG/M
3300012096\|Ga0137389_11658593	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300012350\|Ga0137372_10007435	All Organisms → cellular organisms → Bacteria	10602	Open in IMG/M
3300012356\|Ga0137371_10349353	Not Available	1149	Open in IMG/M
3300012361\|Ga0137360_11626894	Not Available	551	Open in IMG/M
3300012917\|Ga0137395_10807631	All Organisms → cellular organisms → Bacteria	679	Open in IMG/M
3300014153\|Ga0181527_1404587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300014489\|Ga0182018_10653567	Not Available	550	Open in IMG/M
3300014495\|Ga0182015_10807343	Not Available	589	Open in IMG/M
3300014501\|Ga0182024_10661702	Not Available	1296	Open in IMG/M
3300015356\|Ga0134073_10046666	Not Available	1147	Open in IMG/M
3300017938\|Ga0187854_10037471	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	2506	Open in IMG/M
3300017940\|Ga0187853_10523146	Not Available	516	Open in IMG/M
3300018024\|Ga0187881_10276037	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300018034\|Ga0187863_10183803	Not Available	1164	Open in IMG/M
3300018034\|Ga0187863_10719002	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300018035\|Ga0187875_10606407	Not Available	577	Open in IMG/M
3300018042\|Ga0187871_10003345	All Organisms → cellular organisms → Bacteria → Acidobacteria	12482	Open in IMG/M
3300018047\|Ga0187859_10432741	Not Available	725	Open in IMG/M
3300018057\|Ga0187858_10234019	Not Available	1185	Open in IMG/M
3300018468\|Ga0066662_10659917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	991	Open in IMG/M
3300018468\|Ga0066662_12001499	Not Available	606	Open in IMG/M
3300019082\|Ga0187852_1204633	Not Available	813	Open in IMG/M
3300019082\|Ga0187852_1314408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300019887\|Ga0193729_1041499	All Organisms → cellular organisms → Bacteria → Acidobacteria	1900	Open in IMG/M
3300020579\|Ga0210407_11371908	Not Available	525	Open in IMG/M
3300020582\|Ga0210395_10405209	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1026	Open in IMG/M
3300020582\|Ga0210395_10934390	Not Available	644	Open in IMG/M
3300020583\|Ga0210401_10110758	All Organisms → cellular organisms → Bacteria	2577	Open in IMG/M
3300021181\|Ga0210388_10110821	All Organisms → cellular organisms → Bacteria	2358	Open in IMG/M
3300021181\|Ga0210388_11332858	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300021401\|Ga0210393_10260205	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Terriglobales bacterium	1408	Open in IMG/M
3300021406\|Ga0210386_10691815	Not Available	879	Open in IMG/M
3300021432\|Ga0210384_11450637	Not Available	591	Open in IMG/M
3300021433\|Ga0210391_10525945	All Organisms → cellular organisms → Bacteria → Acidobacteria	929	Open in IMG/M
3300021433\|Ga0210391_10703860	Not Available	791	Open in IMG/M
3300021474\|Ga0210390_10627116	All Organisms → cellular organisms → Bacteria	900	Open in IMG/M
3300021477\|Ga0210398_11338959	Not Available	561	Open in IMG/M
3300021479\|Ga0210410_11684284	Not Available	528	Open in IMG/M
3300021559\|Ga0210409_11133833	Not Available	657	Open in IMG/M
3300021559\|Ga0210409_11500260	Not Available	550	Open in IMG/M
3300022512\|Ga0242676_1011617	Not Available	814	Open in IMG/M
3300024330\|Ga0137417_1096501	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1380	Open in IMG/M
3300025473\|Ga0208190_1061853	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300025939\|Ga0207665_10583274	Not Available	872	Open in IMG/M
3300026326\|Ga0209801_1308676	Not Available	561	Open in IMG/M
3300026328\|Ga0209802_1028051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2991	Open in IMG/M
3300026331\|Ga0209267_1072752	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1500	Open in IMG/M
3300026540\|Ga0209376_1076357	All Organisms → cellular organisms → Bacteria → Acidobacteria	1799	Open in IMG/M
3300027172\|Ga0208098_1017341	Not Available	699	Open in IMG/M
3300027537\|Ga0209419_1013345	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300027567\|Ga0209115_1103627	Not Available	645	Open in IMG/M
3300027575\|Ga0209525_1003713	All Organisms → cellular organisms → Bacteria → Acidobacteria	3454	Open in IMG/M
3300027575\|Ga0209525_1031575	Not Available	1306	Open in IMG/M
3300027587\|Ga0209220_1011550	All Organisms → cellular organisms → Bacteria → Acidobacteria	2354	Open in IMG/M
3300027591\|Ga0209733_1061807	All Organisms → cellular organisms → Bacteria	981	Open in IMG/M
3300027591\|Ga0209733_1103171	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300027635\|Ga0209625_1055177	Not Available	886	Open in IMG/M
3300027648\|Ga0209420_1009668	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3501	Open in IMG/M
3300027648\|Ga0209420_1056779	All Organisms → cellular organisms → Bacteria	1165	Open in IMG/M
3300027829\|Ga0209773_10041077	All Organisms → cellular organisms → Bacteria → Proteobacteria	1855	Open in IMG/M
3300027857\|Ga0209166_10288977	Not Available	864	Open in IMG/M
3300027884\|Ga0209275_10271143	Not Available	936	Open in IMG/M
3300027884\|Ga0209275_10417960	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300027884\|Ga0209275_10794315	Not Available	546	Open in IMG/M
3300027889\|Ga0209380_10084164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1827	Open in IMG/M
3300027908\|Ga0209006_10003879	All Organisms → cellular organisms → Bacteria	13597	Open in IMG/M
3300027910\|Ga0209583_10713639	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → unclassified Chitinophagaceae → Chitinophagaceae bacterium	524	Open in IMG/M
3300028015\|Ga0265353_1015259	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	723	Open in IMG/M
3300028020\|Ga0265351_1010645	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300028806\|Ga0302221_10466665	Not Available	551	Open in IMG/M
3300028863\|Ga0302218_10022818	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter modestus	1988	Open in IMG/M
3300029636\|Ga0222749_10389504	All Organisms → cellular organisms → Bacteria	737	Open in IMG/M
3300029910\|Ga0311369_10315174	All Organisms → cellular organisms → Bacteria → Acidobacteria	1390	Open in IMG/M
3300030399\|Ga0311353_10002817	All Organisms → cellular organisms → Bacteria → Proteobacteria	23967	Open in IMG/M
3300030399\|Ga0311353_11173463	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300030494\|Ga0310037_10383435	Not Available	585	Open in IMG/M
3300030503\|Ga0311370_10665980	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium ADurb.BinA280	1230	Open in IMG/M
3300031028\|Ga0302180_10158431	Not Available	1249	Open in IMG/M
3300031231\|Ga0170824_106409088	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300031233\|Ga0302307_10035263	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2724	Open in IMG/M
3300031234\|Ga0302325_11095931	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300031525\|Ga0302326_10626463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rhodanobacter → unclassified Rhodanobacter → Rhodanobacter sp. MP7CTX1	1592	Open in IMG/M
3300031708\|Ga0310686_101429021	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2102	Open in IMG/M
3300031718\|Ga0307474_10026816	All Organisms → cellular organisms → Bacteria	4211	Open in IMG/M
3300031820\|Ga0307473_10613763	All Organisms → cellular organisms → Bacteria → Acidobacteria	753	Open in IMG/M
3300032205\|Ga0307472_101000514	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	783	Open in IMG/M
3300032515\|Ga0348332_10429247	Not Available	596	Open in IMG/M
3300032515\|Ga0348332_11242398	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	85.51%
Aquatic	Environmental → Aquatic	14.49%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.36%
Freshwater	Environmental → Aquatic → Freshwater	13.04%
Peat	Environmental → Terrestrial → Peat	8.70%
Sediment	Environmental → Aquatic → Sediment	1.45%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	50.72%
Loam	Environmental → Terrestrial → Soil → Loam	20.29%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.70%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.35%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.45%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.57%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	17.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	17.39%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.17%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.17%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.45%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.49%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	12.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.70%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	8.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	7.97%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	5.07%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.62%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.90%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.17%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.17%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.17%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.17%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.45%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.45%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	1.45%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.72%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300001145	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002912	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009628	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_10	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300018024	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_100	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022512	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027172	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF038 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027575	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O1 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027625	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG (SPAdes)	Environmental	Open in IMG/M
3300027635	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_M2 (SPAdes)	Environmental	Open in IMG/M
3300027648	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028015	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE6	Environmental	Open in IMG/M
3300028020	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030503	III_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030618	II_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031233	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_2	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032515	FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12637J13337_10025382	3300001137	Forest Soil	METSAPAQSASDRYPRAASPIHTILVLAAIGGWAIGHKIFVDQLSATANPNRVRFYVVTLFYEWLLFVLVVAGVRRSGASVL
JGI12682J13319_10024981	3300001145	Forest Soil	VREGGIWVDEVIMETSALAQSASDRYSQVASPIHTILVLAAMGGWAIWHKIFADQLSATANPSRVRFYVVTLFYEWLLFVLVV
JGI12635J15846_101716421	3300001593	Forest Soil	METSAPAQSASDRYPRAASPIHTILVLAAIGGWAIGHKIFVDQLSATANPNRVRFYVVTLFYEWLLFVLVVA
JGI12635J15846_108709481	3300001593	Forest Soil	METSAPAQSASDRYPRAASPIHTILVLAAIGAWTIGHKIFVDQLSTTANPNRLRFYVVT
JGIcombinedJ26739_1002522223	3300002245	Forest Soil	METSALTRSSSDRYPQIASPIHTILVLAALGGWAIWHRSFADQLSAAANPNRVRFYIVTLIYERLLFVLVVAGV*
JGI25382J43887_101303711	3300002908	Grasslands Soil	METPAQAQSASDRYPQVASPIHTILVLAALGSWAIWHKSFAQLNLTANPNRVRFY
JGI25386J43895_100165111	3300002912	Grasslands Soil	METSAQAQSASDRYLQIASPIHTILVLAALGGWAIWHKSFADQLSTAA
Ga0062385_106442541	3300004080	Bog Forest Soil	VETSALGQPASDGYRRVASPIHTILVLAVLGGWAFWHKISADQLRVAANPNRVRFYLAIIFFEWLLF
Ga0062389_1029501871	3300004092	Bog Forest Soil	VETSALGQPASDGYRRVASPIHTILVLAVLGGWAFWHKISADQLRVAANPNRV
Ga0066683_101649992	3300005172	Soil	METPAQAQSASDRYPQVASPIHTILVLAALGSWAIWHKSFAQLNLTANPNRVRFYIVTVFYEWLLFVLVV
Ga0066689_108875431	3300005447	Soil	METPAQAQSASDRYPQVASPIHTILVLAALGGWAIWHKSFAQLNLTANPNRVRFYIVTVFYEWLLFVLVVAGVRRRGASVLIV
Ga0070697_1006472312	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MDTPAQAQSASDRYLQIASPIHTILVLAALGGWAIWHKSFADQLSTAANPNRVRFYIVTLFYEWLLFV
Ga0070730_104380591	3300005537	Surface Soil	MDTPAQAQSASERYCQIASPIHTILVLAALGGWVIWHASFAQLNLTANPSRVHFYVVTMFFEWLLFVLVVAGVRRR
Ga0066661_105079501	3300005554	Soil	MKTAGQAQSASDRYSQVASPIHTILVLAALGGWAIWHKSFAQLNLTANPNRVRFY
Ga0066692_105059842	3300005555	Soil	METSAQAQSASDRYLQIASPIHTILVLAALGGWAIWHKSFADQLSTAANPNRVRFYIVTL
Ga0066707_108011901	3300005556	Soil	METSAQAQSASDRYLQIASPIHTILVLAALGGWAIWHKSFADQLSTAANPNRVRFYIVTLFYEWLLFVLVVAGV
Ga0066703_108256561	3300005568	Soil	METSAQAQSASDRYLQIASPIHTILVLAALGGWAIWHKSFADQLSTAANPNRVRFY
Ga0066702_101122653	3300005575	Soil	METPAQAQSASDRYPQVASPIHTILVLAALGGWAIWHKSFADQLSTAANPNRVRFYIVTLFYEWLLFVLVVAGVRRRGASVLIVLGDHWHSA
Ga0066654_100440151	3300005587	Soil	METPAQAQSASDRYLQIAGPVHTILVLAALCGWAIWHKSFADQLSTAANPNRVRFYIVTLFYEWLLFVLVVAGV
Ga0070762_100784541	3300005602	Soil	MGTSAPAQSASDRYPRTASPIHTILVLAAMGGWAIGHKILADQSSATANPNRVRYYVVTIFYEWLLFVLVVAGVRRSGA
Ga0075017_1001288131	3300006059	Watersheds	MESSALAQSTSDRYPQVASPLHTILMLAALAGWAFGAKILSAQMRTAASPNRGR
Ga0070716_1007873002	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MKTATQAQSPSDRHPQVASPIHTILVLAALGGWAMWHKSFAQLNLTA
Ga0070716_1010885242	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	METSALAQPVPDRYPRVASSLHTILVLATLAGWAFWGKTLADQLSAAANPNRVRFYAVTLLFEWLLFVFVLAGVRQSG
Ga0070765_1012636881	3300006176	Soil	MDTSALAQSASGRYSRVASPIHTILVLAALGGWAIWHKSFADQLSAAATPNRVRFYIVTIFYEWLLFVLVVAGVHHSSASVLVVLG
Ga0066665_115872421	3300006796	Soil	METPAQAQSASDRYPQVASPIHTILVLAALGGWAIWHKSFAQLNLTANPNRVRFYIVTVFYEWLLFVLVVAGVWRRGASVLIVLGDHWHSA
Ga0066659_106301961	3300006797	Soil	MKTAGQAQSASDRYPQVASPIHTILVLAALGGWAIWHKSFAQLNLTANPNRVRFY
Ga0066660_101624343	3300006800	Soil	MKTVGQAQSASDRYPQVASPIHTILVLAALGGWAIWHKSFAQLNLTANPNRVRFYVVTIFFEWLSFVMVVAGVGRRVASV
Ga0099828_116927651	3300009089	Vadose Zone Soil	METSALTQSASDRYPQIASPIHTILVLAALGGWAIWHKSFADQLSAAANPNRVRFYMVTLLYEWLLFVLVVAGVRLR
Ga0099792_106210151	3300009143	Vadose Zone Soil	MGTSFLTRSASDRYAQAAGPLHTIFVLAALTVWAFLGKTLADQLSAAVNPQRVRFYAVTLLFEWFLFVFVVAGVRRSGASILIVLGDH
Ga0116225_11616832	3300009524	Peatlands Soil	METSALAQSTSDRYPQVASPLHTILVLAALGGWAFWAKILADRLSAAPNPNRV
Ga0116125_12117461	3300009628	Peatland	METSALPQSASERYPRTAGLTHTILVLAALAGWAIWHKIFADHQSAAANPSHVRFYVVTLGYEWLLFILVV
Ga0116112_10983642	3300009636	Peatland	MDRHEVIMQTSALAQSTSDRYPTVASPIHTILVIVAVAGWAFWFKTFADQLRV
Ga0116224_106488691	3300009683	Peatlands Soil	METSAPAQPTSDRYPKVASPTHTILVLAALAGWAFWHKTSVDQLSTEANPNRVRF
Ga0116216_106502312	3300009698	Peatlands Soil	VVESSALTQSESDGYAPAAGRLHTILVLAAIGGWTIWHRIFTDQLSAAANPNRVRFYVVTLFYEWLLFVLVVAG
Ga0134086_100588483	3300010323	Grasslands Soil	METPAQAQSASDRYLQIAGPVHTILVLAALGGWAIWHKSFADQLSTAANPNRV
Ga0134064_102815531	3300010325	Grasslands Soil	METPAQAQSASDRYPQVASPIHTIWVLAALGSWAIWHKSFAQLNLTANPNRVRFYIVTVFYEW
Ga0074045_108629011	3300010341	Bog Forest Soil	MMETSAQAQSASNRYTPIASPIHTILVLVVLGGWAIWHKSFADQLSLAANPNRVRLYMVTLVYEWLLFVLVV
Ga0074045_108846921	3300010341	Bog Forest Soil	METSARAQSVSERYPRAAGPIHTILVLAALGGWAFGFKIFSDHLRAVANPNHVRFYVVTILFEWLMFALVVAGVRRNGASVLIVLGD
Ga0074044_106952021	3300010343	Bog Forest Soil	MQTSALGQSASDRYTQIASPIHTILVLALLGGWAFWHKISVDHLNVAANPNRVRFYLVTLFFEWLLFV
Ga0137393_116322121	3300011271	Vadose Zone Soil	MDIPAQAQSASDRYLQIASPIHTILVLAALGGWAIWHKSFADQLSTAANPNRVRFYIVTLFYEWLLFVLVVAGVRRHG
Ga0137389_112398011	3300012096	Vadose Zone Soil	MKTAAQAHSASDRYPQVASPIHTILVLAALGGWAIWHKSFAQLNLTANPNRVRFYVVTI
Ga0137389_116585931	3300012096	Vadose Zone Soil	METSALAQSAPDRYPRVAGSLHTILVLATLAGWAFWGKTLADQLSAAANPNRVRFYEVTLFFEWLL
Ga0137362_105977071	3300012205	Vadose Zone Soil	MDIPAQAQSASDRYLQIASPIHTILVLAALGGWAIWHKSFADQLSTA
Ga0137372_100074351	3300012350	Vadose Zone Soil	METPAQAQSASDRYPQVASPIHTILVLAALGSWAIWHKSFAQLNLTANPNRVRFYIVTVFYEW
Ga0137371_103493532	3300012356	Vadose Zone Soil	METPAQAQSASDRYPQVASPIHTILVLAALGSWAIWHKSFAQLNLTANPNRVRFYIV
Ga0137360_116268941	3300012361	Vadose Zone Soil	METPTQHQSAPDRYLQIASPIHTILVLAALGGWAIWHKGFADQLSTAANPNRVRFYVVTLFYEWLLLVLVVAGVWRRGAS
Ga0137395_106586332	3300012917	Vadose Zone Soil	MKTSILAQSATDRYPRAAGSLHTILVLATLAGWAYWGKILADQLSAAANP
Ga0137395_108076311	3300012917	Vadose Zone Soil	MDTPAQAQAASDRYLQIASPIHTILVLAALGGWAIWHKSFADQLSTAANPNRVRFYIVTLFYEWLLFVLVVAG
Ga0181527_14045871	3300014153	Bog	METSALAQSASDRYSQVASPLHTILVLAALGGWAFWGKILADQLSAAANPNRVRFYAVILLFEWLLF
Ga0182018_106535671	3300014489	Palsa	METSALPQSASDRYPQAASPIHTILVLAAMGGWAIWHKIFADHLSAAANPSRVRFYIITLFYEWLLFILVVAGVWRSGASVLIVLGDHWHS
Ga0182015_108073431	3300014495	Palsa	MAFRANEVIIETSVLGQSASDRYPQVASPSHTILVLGVLGGWALWHKISTDQLSVAADPNRVRFYLVTLFFEWLLFVLVVAGVRRRG
Ga0182024_106617021	3300014501	Permafrost	MAFRANEVIIETSVLGQSASDRYPQVASPSHTILVLGVLGGWALWHKISTDQLSVAADPNRVRFYLVTL
Ga0134073_100466662	3300015356	Grasslands Soil	METPAQAQSASDRYLQIAGPVHTILVLAALGGWAIWHKSFADQLSTAANPNRVR
Ga0134072_101012382	3300015357	Grasslands Soil	METPAQAQSASDRYLQIAGPVHTILVLAALGGWAIWHKSFADQLSTA
Ga0187854_100374711	3300017938	Peatland	MQTSALAQSTSDRYPTVASPIHTILVIVAVAGWAFWFKTFADQLRVAASPNRVRFYVITL
Ga0187853_105231461	3300017940	Peatland	METSAPAQPTSDRYPRVASPTHTILVLAALAGWAFWHKTSVDQLSTEANPNR
Ga0187881_102760371	3300018024	Peatland	METSAPAPSASDRYSQVASPLHTILVLAALGGWTFWHKISVDQLSAAANPNRVRAYVVTILLEWLFF
Ga0187863_101838031	3300018034	Peatland	METSAPAKSASGRYPRVASPMHTILVLAAIGGWTIGHKIFIDQLSAAANPNRVRFYVVTGLYEWLLF
Ga0187863_107190022	3300018034	Peatland	VETSSQAQSASNRYSLIASPVHTMLVLAVLGGWAFWHKSFADQLSVAANPNRVRFYI
Ga0187875_106064071	3300018035	Peatland	MVENSAQAQSASNRYSLIASPIHTMLVLAVLGSWAIWHKSFADQLSVAANPNRVRFYIVTLVYEWLLFVLVV
Ga0187871_1000334525	3300018042	Peatland	METSAPAKSASGRYPRVASPMHTILVLAAIGGWTIGHKIFIDQLSAAANPNRVRFYVVTGLY
Ga0187859_104327412	3300018047	Peatland	METSAPAKSASGRYPRVASPMHTILVLAAIGGWTIGHKIFIDQLSAAANPNRVRFYVVTG
Ga0187858_102340191	3300018057	Peatland	METSAPAKSASGRYPRVASPMHTILVLAAIGGWTIGHKIFIDQLSAAANPNRVRFYVVTGLYEWLLFV
Ga0066662_106599171	3300018468	Grasslands Soil	MKTVGQAQSASDRYPQVASPIHTILVLAALGGWAIWHKSFAQLNLTANPNRVRFY
Ga0066662_120014991	3300018468	Grasslands Soil	METSAQAQSASDRYLQIASPIHTILVLAALGGWAIWHKSFADQLSAAANPNRVRFYMVTLLYEWLLFVLVVAGVRLRGASV
Ga0187852_12046331	3300019082	Peatland	METSALPRSASDRYPQAASPTHTILVLAAMGGWAIWHKVFADHLSAAANPSRVRFYVVTLFYEWLLFILVVAGVRRS
Ga0187852_13144081	3300019082	Peatland	METSAPAPSASDRYSQVASPLHTILVLAALGGWTFWHKISVDQLSAAANPNRVRFYAVTLLFEWLLFAFVLAG
Ga0193729_10414991	3300019887	Soil	METSAPAQSASDRYRRVASPIHTILVLVAIGAWSIGHKIFADQLSATANPNRMRFYAVTLLYEWFLFVLG
Ga0210407_113719081	3300020579	Soil	METSAPAQSASDRYPRAASPIHLILVLAAMGGWAIGHKIFAYQLSATANPNRVRYYVVTIFY
Ga0210395_104052091	3300020582	Soil	VQTSALGQSASDRYPQIASSIHTILLLAVLGGWAVGHKIFADQLSATANPNRVRYYVVTIFYEWLLFVLVVAGVRRSGASVL
Ga0210395_109343902	3300020582	Soil	VESSALTQSESDGYAPAAGPLHTILVLAAIGGWTIWHRIFTNQLSAAANPNRVSFYVVTLFYEWLLFVLVVAGVRRSGASDPYLRSGKTEGR
Ga0210401_101107583	3300020583	Soil	METSAPAQSASDRYLRAASPIHMILVLAAMGGWAIGHKIFADQLSATANPNRVRYY
Ga0210388_101108213	3300021181	Soil	VESSALTQSESDGYAPAAGPLHTILVLAAIGGWTIWHRIFTNQLSAVANPNRVRFYVVTLFYEWLLFVLVVAGVRRSGASVL
Ga0210388_113328582	3300021181	Soil	METSASGQSASGRYPPVASPIHTILVLAALGGWAFWHKISVDQLSVAANPNRVRFYLVTLFFEWLLFVLVVAGVRSSGASLLVVLGDHW
Ga0210393_102602053	3300021401	Soil	LLLTEGYAPAAGPLHTILVLAAIGGWTIWHRIFTNQLSAVANPNRVRFYVVTLFYEWLLF
Ga0210386_106918152	3300021406	Soil	VESSALTQSESDGYAPAAGPLHTILVLAAIGGWTIWHRIFTNQLSAAANPNRVRSY
Ga0210384_114506371	3300021432	Soil	METSAPAQSASDRYPRAASPIHTILVLAVVGGWTIGHKTFANQLSATANPNRVRFYVATLFYEWLLFVLVV
Ga0210391_100770655	3300021433	Soil	MQTSALGQSASDRYPQIASSIHTILLLAVLGGWAVGHKIFADQLS
Ga0210391_105259451	3300021433	Soil	METSASGQSASGRYPPVASPIHTILVLAALGGWAFWHKISVDQLSVAANPNRVRFYLVTLFYEWLLFVLVVEGVR
Ga0210391_107038603	3300021433	Soil	METSALAQSASDRYPQVASPIHTILVLAAISGWAIWHKIFAHQLNAVANPNRVRFYLVTL
Ga0210390_106271162	3300021474	Soil	VETSAPAPSASSGYPRVASPIHTILVLGAIGGWAIGHRIFADQLSATANPNRILFYG
Ga0210390_108572141	3300021474	Soil	MQTSALGQSASVRYPQIASPIHTILVLAVLGGWAIWHKILADQLSAAANPSRV
Ga0210398_113389591	3300021477	Soil	METSALAQSASDRYPQVASPIHTILVLAAISGWAIWHKIFAHQLNAVANPNRVRFYL
Ga0210410_116842841	3300021479	Soil	METSAPAQSASDRYPRAASPIHTILVLAVVGGWTIGHRIFANQLSATANPNRVRFYVATLFYE
Ga0210409_111338332	3300021559	Soil	METSAPAQSASGRYPRLASPIHTILVLAAIGGWAIGHRIFADQLSATANPNRVGFYVVTVLYEWLLFALVVVGVRRSGAS
Ga0210409_115002601	3300021559	Soil	METSAPAPSASSGYPRVASPIHTILVLGAIGGWAIGHRIFADQLSATANPNRILFYGVTVLYEWLLFVLVVAAVRRSGASVIT
Ga0242676_10116172	3300022512	Soil	VESSVLTQSESEGYAPAAGPLHTILVLAAIGGWTIWHRIFTNQLSAVANPNRVRFYVVTLFYEWLLFVLVVAGVRRSGASVL
Ga0137417_10965013	3300024330	Vadose Zone Soil	METSAPAQSASDRYPRAAGPIHTILVLAAMGGWAIGHKIFADQLSATANPNRVRYYVVTIFYEWLLFVLVVAG
Ga0208190_10618532	3300025473	Peatland	METSALPQSASDRYPQVASPIHTILVLAAIGGWAIWHKIFADQLSAANPNRVRFYLGTLFYEWLLFVLVVEGVR
Ga0207665_105832743	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	METSALAQPVPDRYPRVASSLHTILVLATLAGWAFWGKTLADQLSAAANPNRVRFYAVTLLFEWLLFVFVLAGVRQSGA
Ga0209801_13086761	3300026326	Soil	MGTSFLTRSASDRYAQAAGPLHTIFVLAALAVWAFLGNILADQLSAAVNPQRVRFYAVTLLFEWFLFVFVVAGVQR
Ga0209802_10280511	3300026328	Soil	METSAQAQSASDRYLQIASPIHTILVLAALGGWAIWHKSFADQLSTAANPNRVRFYIVTLFY
Ga0209267_10727521	3300026331	Soil	METPAQAQSASDRYPQVASPIHTILVLAALGGWAIWHKSFAQLNLTANPNRVRFYIVTVFYEWLLFVLVVAG
Ga0209376_10763572	3300026540	Soil	METPAQAQSASDRYPQVASPIHTILVLAALGSWAIWHKSFAQLNLTANPNRVRFYIVTVFYEWLLFVLVVAGVWRRGASVWVTIRSSCSRIAVSN
Ga0208098_10173412	3300027172	Forest Soil	MGTSAPAQSASDRYPRTASPIHTVLVLAAMGGWTIGHKIFADQLSATANPNRVRFYVVTIFFEW
Ga0209419_10133453	3300027537	Forest Soil	METSAPAQSASGRYPRVASPIHTILVLAAIGGWAIGHRIFADQLSATANPNRVRFYVVTVLYEWLLFVLVVVGVRRSGASVIT
Ga0209115_11036271	3300027567	Forest Soil	MESSALVESASDRYPQIASPIHTILVLAAMGGWAIWHKIFADQLSAAANPSRVRFYVVTIFYEWLLFVL
Ga0209525_10037136	3300027575	Forest Soil	METSALTRSSSDRYPQIASPIHTILVLAALGGWAIWHRSFADQLSAAANPNRVRFYIVTLIYERLLFVLVVAGV
Ga0209525_10315752	3300027575	Forest Soil	MDTSARAQSSSDRYPQIASPIHTILVLAALAGWAIWHKSFADQLSAAANPNRLRFYIVTLIYEWLLFVIVVAGVRHRGASVFAVLGDH
Ga0209220_10115502	3300027587	Forest Soil	METSAPAQSASDRYPRAASPIHTILVLAAIGAWTIGHKIFVDQLSATANPNRLRFYVVTLFYEWLLFVLVLA
Ga0209733_10618071	3300027591	Forest Soil	METPAQAQSASERYFQIASPIHTILVLAALGGWAIWHKSFADQLSAAANP
Ga0209733_11031711	3300027591	Forest Soil	METSALAQSASERYPKLASPIHTIFVLAVMGGWTVGHKMFADRLGAAANPHRVRFYVVTLIYEWLLFVLVVAG
Ga0208044_11597742	3300027625	Peatlands Soil	METSALAQSTSDRYPQVASPLHTILVLAALGGWAFWAKILADRLSAAPNPNR
Ga0209625_10551772	3300027635	Forest Soil	METSAPGQSASDRYPQIASPIHTILVLAAIGGWAIGHKIFADQVSATVNPNR
Ga0209420_10096681	3300027648	Forest Soil	MQTSALGQSASDRYPQIASSIHTILLLAVLGGWAVGHKIFADQLSATANPNRVRY
Ga0209420_10567791	3300027648	Forest Soil	MESSALVESASDRYPQIASPIHTILVLAAMGGWAIWHKIFADQLSAAANPSRVRFYVVTIFYEWLLFVLVVA
Ga0209773_100410771	3300027829	Bog Forest Soil	VETSALGQPASDGYRRVASPIHTILVLAVLGGWAFWHKTSVDQLSTAANPNRVRFYLVTLLFEWLLFLLVVAGVRISGTPVRIILGDRWHS
Ga0209166_102889772	3300027857	Surface Soil	MDTPAQAQSASERYCQIASPIHTILVLAALGGWVIWHASFAQLNLTANPSRVHFYVVTMFFEWLLFVLVVAGVRRRGGSVLI
Ga0209275_102711431	3300027884	Soil	METSALAQSASDRYPQVASPIHTILVLAAISGWAIWHKIFAHQLNAVANPNRVRFYLVT
Ga0209275_104179601	3300027884	Soil	LESSALVESSSDRYQQIASPIHTILVLAAMCAWSICHKFFVDQLSATANPSRVSFYIATIFCEWLLFVLVLAG
Ga0209275_107943152	3300027884	Soil	METSAPAQSASGRYPRLASPIHTILVLAAIGGWATGHRIFADQLSATANPNRVGF
Ga0209380_100841641	3300027889	Soil	MQTSALGQSASVRYPQIASPIHTILVLAVLGGWAIWHKILADQLSAAANPSRVRFYLVTCFYEWL
Ga0209380_102662483	3300027889	Soil	METSAPAQSASDRYRQAASPIHTILVLVAIGGWTIGHKIFVDQLSAA
Ga0209006_100038791	3300027908	Forest Soil	MGTSAPAQSASDRYPRAASPIHTILVLAAMGGWAIGHKIFADQLSATANPNRVRYYVVTIFYEWLLFVLVVA
Ga0209583_107136391	3300027910	Watersheds	MKTAAQAQSASDRYPQVASPIHTILVLAALGGWAIWHKSFAQLNLTANPNRVRFYVVTIFFEWLLFVLV
Ga0265353_10152592	3300028015	Soil	VREDGILANEGIMETSASGQSASDGYPQVASPIHTILVLALLGGWAFWHKISVDHLNVAANPNRVRFYLVTL
Ga0265351_10106452	3300028020	Soil	MQTSALGQSASDRYPQIASSIHTILLLAVLGGWAVGHKIFADQLSATANPNRVRYYVVTIFYEWLLFVLVVAGVR
Ga0302221_104666651	3300028806	Palsa	MDTPALDQPASDRYRQIASPIHTIVVLAAMGGWAIWHKSFADQLNAAANPNRVRFYIVTIFYEWFLFVLVVA
Ga0302218_100228181	3300028863	Palsa	MEISAPAQSASGRYPRVASPIHTILVLAAIGGWTIGHRIFTDQLIATANPNRVRFYVVTLFYE
Ga0222749_103895042	3300029636	Soil	METSAPAQSASDRYLRAASPIHMILVLAAMGGWAIGHKIFADQLSATANPNRVRYYVVTIFYEWLLFVLVVA
Ga0311369_103151741	3300029910	Palsa	METSASGQSASGRYPPVASPIHTILVLAALGGWAFWHKISVDQLSVAANPNRVRFYLVTLFFEWLLFVLVVAGVRSSGASI
Ga0311353_100028171	3300030399	Palsa	MEISAPAQSASGRYPRVASPIHTILVLAAIGGWTIGHRIFTDQLIATANP
Ga0311353_111734631	3300030399	Palsa	METSALAQSASDRYPQAASPIHTILVLAAIGGWAIRHKAFADQLSAAASPNRV
Ga0310037_103834352	3300030494	Peatlands Soil	VESSALTQSESDGYAPAAGRLHTILVLAAIGGWTIWHRIFTDQLSAAANPNRVRFYVVTLFYEWLLFVLVV
Ga0311370_106659802	3300030503	Palsa	MESPALDGSPSDRHPQIASPIHTILVLAAIGGWAIGHAIFADRLSAAANPSRVRFYVATLFYEWLLFVLAVAGVRRSG
Ga0311354_119526922	3300030618	Palsa	METCPLDQSALDRYPRVASPIHTLLVLAALGGWAFSHKISADHLSKAAR
Ga0302180_101584311	3300031028	Palsa	MDTPALDQPASDRYRQIASPIHTIVVLAAMGGWAIWHKSFADQLSTAANPNRLRFYIVTLFYEWLLFVLVV
Ga0170824_1064090881	3300031231	Forest Soil	METSAPAQSASDRYPRAASPIHTILVLVAIGAWAIGHKIFADQLSATA
Ga0302307_100352631	3300031233	Palsa	MEISAPAQSASGRYPRVASPIHTILVLAAIGGWTIGHKIFTDQSIATANPNRVHFYVVTLFYEWLLFVL
Ga0302325_110959312	3300031234	Palsa	METSALAQSASDRYPQAASPIHTILVLAAIGGWAICHKIFADQLSPAANPNRVRYYIVTLFYEW
Ga0302326_106264633	3300031525	Palsa	MESPALDESQSDRHPPIASPIHTILVLAAIGGWAIGHAIFADRLSAAANPSRV
Ga0302326_106812061	3300031525	Palsa	METSALAQSASDRYPQAASPIHTILVLAAIGGWAICHKIFADQLSPAA
Ga0310686_1014290211	3300031708	Soil	METSASGQSASGRYPPVASPIHTILVLAALGGWAFWHKISVDQLSVAANPNR
Ga0307474_100268161	3300031718	Hardwood Forest Soil	MGTSAPAQSASDRYPRLASPIHTILVLAAIGGWATGHRILADQLSATANPNRVGFYVVTL
Ga0307473_106137632	3300031820	Hardwood Forest Soil	METSAPAQSSSDRYPRAASPIHTILVLAVMGGWTIGHKIFVDQLSATANPNRMRYYVATIFYEWLLFVLVVAG
Ga0307472_1010005141	3300032205	Hardwood Forest Soil	MDTPAQAQSASDRYLQIASPIHTILVLAALGGWAIWHKSFADQLSTAANPNRVRFYIVTLFYEWLLFVLVVAGVRRHGASVLIVLGDHWH
Ga0348332_104292471	3300032515	Plant Litter	VDNCVPAQSASDRYRQVASPLHTILVLVVLGGWALWHKISADQLIGAANPNRV
Ga0348332_112423982	3300032515	Plant Litter	VQTSALGQSASDRYPQIASSIHTILLLAVLGSWAVGHKIFADQLSATANPNRVRYYVVTIFYEWLLFVLVV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055986

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences