Metagenome / Metatranscriptome Family F055996

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F055996
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	108 residues
Representative Sequence	VPQQVLAPAQDLPVAMLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ
Number of Associated Samples	99
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	44.35 %
% of genes near scaffold ends (potentially truncated)	44.93 %
% of genes from short scaffolds (< 2000 bps)	63.77 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.86

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.855 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (23.188 % of family members)
Environment Ontology (ENVO)	Unclassified (53.623 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.145 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.43% β-sheet: 6.52% Coil/Unstructured: 63.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.86
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.86
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.1.10.8: Class-II DAHP synthetase	d2ypoa_	2ypo	0.50747
a.103.1.0: automated matches	d3msua1	3msu	0.50013

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF01078	Mg_chelatase	23.91
PF13519	VWA_2	18.12
PF07726	AAA_3	2.17
PF13191	AAA_16	1.45
PF02866	Ldh_1_C	1.45
PF08241	Methyltransf_11	0.72
PF01882	DUF58	0.72
PF13374	TPR_10	0.72
PF00329	Complex1_30kDa	0.72
PF00923	TAL_FSA	0.72
PF07728	AAA_5	0.72
PF14801	GCD14_N	0.72
PF00079	Serpin	0.72
PF01726	LexA_DNA_bind	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG0039	Malate/lactate dehydrogenase	Energy production and conversion [C]	1.45
COG0176	Transaldolase/fructose-6-phosphate aldolase	Carbohydrate transport and metabolism [G]	0.72
COG0852	NADH:ubiquinone oxidoreductase 27 kD subunit (chain C)	Energy production and conversion [C]	0.72
COG1721	Uncharacterized conserved protein, DUF58 family, contains vWF domain	Function unknown [S]	0.72
COG3262	Ni,Fe-hydrogenase III component G	Energy production and conversion [C]	0.72
COG4826	Serine protease inhibitor	Posttranslational modification, protein turnover, chaperones [O]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.86 %
Unclassified	root	N/A	10.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.86 %
Unclassified	root	N/A	10.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.86 %
Unclassified	root	N/A	10.14 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	73.91 %
Unclassified	root	N/A	10.14 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	31.16 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	14.49 %
Unclassified	root	N/A	10.14 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.72 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	31.16 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	12.32 %
Unclassified	root	N/A	10.14 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	31.16 %
Unclassified	root	N/A	10.14 %
Thermoanaerobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales	2.17 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.45 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	0.72 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.72 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	31.16 %
Unclassified	root	N/A	10.14 %
Thermoanaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae	2.17 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.45 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	0.72 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.72 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	31.16 %
Unclassified	root	N/A	10.14 %
Thermoanaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae	2.17 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.45 %
Desulfatibacillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatibacillum	0.72 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.72 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	31.16 %
Unclassified	root	N/A	10.14 %
Thermoanaerobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae	2.17 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1.45 %
Mycobacterium talmoniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	0.72 %
Desulfatibacillum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatibacillum	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002558\|JGI25385J37094_10000147	All Organisms → cellular organisms → Bacteria	15184	Open in IMG/M
3300002560\|JGI25383J37093_10000578	All Organisms → cellular organisms → Bacteria	8983	Open in IMG/M
3300004479\|Ga0062595_100018250	All Organisms → cellular organisms → Bacteria	2573	Open in IMG/M
3300004479\|Ga0062595_101022513	All Organisms → cellular organisms → Bacteria → Terrabacteria group	713	Open in IMG/M
3300005166\|Ga0066674_10271106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	801	Open in IMG/M
3300005166\|Ga0066674_10464487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	576	Open in IMG/M
3300005172\|Ga0066683_10206578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1213	Open in IMG/M
3300005179\|Ga0066684_10501978	All Organisms → cellular organisms → Bacteria → Terrabacteria group	814	Open in IMG/M
3300005186\|Ga0066676_10000484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	14379	Open in IMG/M
3300005186\|Ga0066676_10734224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	672	Open in IMG/M
3300005332\|Ga0066388_106506843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	589	Open in IMG/M
3300005363\|Ga0008090_14451438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1218	Open in IMG/M
3300005406\|Ga0070703_10013305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	2336	Open in IMG/M
3300005444\|Ga0070694_101123639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	656	Open in IMG/M
3300005445\|Ga0070708_100062667	All Organisms → cellular organisms → Bacteria	3326	Open in IMG/M
3300005450\|Ga0066682_10052728	All Organisms → cellular organisms → Bacteria	2469	Open in IMG/M
3300005451\|Ga0066681_10100546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1654	Open in IMG/M
3300005451\|Ga0066681_10249341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1077	Open in IMG/M
3300005467\|Ga0070706_100074556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae	3140	Open in IMG/M
3300005471\|Ga0070698_100043126	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4627	Open in IMG/M
3300005518\|Ga0070699_100359332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1313	Open in IMG/M
3300005540\|Ga0066697_10019391	All Organisms → cellular organisms → Bacteria	3663	Open in IMG/M
3300005545\|Ga0070695_100035035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3151	Open in IMG/M
3300005545\|Ga0070695_100221911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1362	Open in IMG/M
3300005545\|Ga0070695_100693225	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → Desulfatibacillum	808	Open in IMG/M
3300005558\|Ga0066698_10018927	All Organisms → cellular organisms → Bacteria	3993	Open in IMG/M
3300005575\|Ga0066702_10071727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1916	Open in IMG/M
3300005576\|Ga0066708_10334245	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	972	Open in IMG/M
3300005587\|Ga0066654_10052136	All Organisms → cellular organisms → Bacteria	1811	Open in IMG/M
3300006031\|Ga0066651_10395280	All Organisms → cellular organisms → Bacteria → Terrabacteria group	738	Open in IMG/M
3300006034\|Ga0066656_10301699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1033	Open in IMG/M
3300006034\|Ga0066656_10478754	All Organisms → cellular organisms → Bacteria → Terrabacteria group	812	Open in IMG/M
3300006046\|Ga0066652_100260769	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300006046\|Ga0066652_101568147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	607	Open in IMG/M
3300006173\|Ga0070716_100375756	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1014	Open in IMG/M
3300006804\|Ga0079221_10344794	All Organisms → cellular organisms → Bacteria → Terrabacteria group	896	Open in IMG/M
3300006852\|Ga0075433_10059871	All Organisms → cellular organisms → Bacteria	3333	Open in IMG/M
3300006852\|Ga0075433_10750680	All Organisms → cellular organisms → Bacteria → Terrabacteria group	853	Open in IMG/M
3300006852\|Ga0075433_10957795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	746	Open in IMG/M
3300006854\|Ga0075425_101197170	All Organisms → cellular organisms → Bacteria → Terrabacteria group	863	Open in IMG/M
3300006871\|Ga0075434_100028907	All Organisms → cellular organisms → Bacteria	5451	Open in IMG/M
3300006871\|Ga0075434_102355885	All Organisms → cellular organisms → Bacteria → Terrabacteria group	535	Open in IMG/M
3300006914\|Ga0075436_100388758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1009	Open in IMG/M
3300006914\|Ga0075436_100767238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	717	Open in IMG/M
3300007076\|Ga0075435_100040236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3732	Open in IMG/M
3300007076\|Ga0075435_100371099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1228	Open in IMG/M
3300009012\|Ga0066710_100251489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae	2557	Open in IMG/M
3300009090\|Ga0099827_10086270	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2464	Open in IMG/M
3300009137\|Ga0066709_100003937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	11644	Open in IMG/M
3300009137\|Ga0066709_101424347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1006	Open in IMG/M
3300009137\|Ga0066709_103364538	All Organisms → cellular organisms → Bacteria → Terrabacteria group	581	Open in IMG/M
3300009147\|Ga0114129_10184297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2838	Open in IMG/M
3300009162\|Ga0075423_11931129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	638	Open in IMG/M
3300010047\|Ga0126382_11025784	All Organisms → cellular organisms → Bacteria → Terrabacteria group	725	Open in IMG/M
3300010301\|Ga0134070_10165521	All Organisms → cellular organisms → Bacteria → Terrabacteria group	798	Open in IMG/M
3300010301\|Ga0134070_10435287	All Organisms → cellular organisms → Bacteria → Terrabacteria group	522	Open in IMG/M
3300010304\|Ga0134088_10007981	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4473	Open in IMG/M
3300010320\|Ga0134109_10213717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	716	Open in IMG/M
3300010321\|Ga0134067_10386200	All Organisms → cellular organisms → Bacteria → Terrabacteria group	558	Open in IMG/M
3300010329\|Ga0134111_10228731	All Organisms → cellular organisms → Bacteria → Terrabacteria group	758	Open in IMG/M
3300010333\|Ga0134080_10053139	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1597	Open in IMG/M
3300010336\|Ga0134071_10040376	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2080	Open in IMG/M
3300010361\|Ga0126378_10714683	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1113	Open in IMG/M
3300010373\|Ga0134128_10040689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Thermoanaerobacterales → Thermoanaerobacteraceae	5414	Open in IMG/M
3300010401\|Ga0134121_12323500	All Organisms → cellular organisms → Bacteria → Terrabacteria group	575	Open in IMG/M
3300012096\|Ga0137389_11621064	All Organisms → cellular organisms → Bacteria → Terrabacteria group	543	Open in IMG/M
3300012198\|Ga0137364_11106596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	596	Open in IMG/M
3300012200\|Ga0137382_10000219	All Organisms → cellular organisms → Bacteria	24049	Open in IMG/M
3300012200\|Ga0137382_10006939	All Organisms → cellular organisms → Bacteria	5762	Open in IMG/M
3300012201\|Ga0137365_11132257	All Organisms → cellular organisms → Bacteria → Terrabacteria group	562	Open in IMG/M
3300012205\|Ga0137362_10383598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1217	Open in IMG/M
3300012207\|Ga0137381_10074996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2833	Open in IMG/M
3300012208\|Ga0137376_10439858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium talmoniae	1132	Open in IMG/M
3300012208\|Ga0137376_10964030	All Organisms → cellular organisms → Bacteria → Terrabacteria group	731	Open in IMG/M
3300012208\|Ga0137376_11104924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	678	Open in IMG/M
3300012210\|Ga0137378_10960467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	768	Open in IMG/M
3300012211\|Ga0137377_10437184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1247	Open in IMG/M
3300012211\|Ga0137377_11832958	All Organisms → cellular organisms → Bacteria → Terrabacteria group	525	Open in IMG/M
3300012285\|Ga0137370_10257503	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1035	Open in IMG/M
3300012285\|Ga0137370_10508466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	738	Open in IMG/M
3300012350\|Ga0137372_11120744	All Organisms → cellular organisms → Bacteria → Terrabacteria group	538	Open in IMG/M
3300012353\|Ga0137367_10293527	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1164	Open in IMG/M
3300012356\|Ga0137371_10133317	All Organisms → cellular organisms → Bacteria	1945	Open in IMG/M
3300012972\|Ga0134077_10032985	All Organisms → cellular organisms → Bacteria	1848	Open in IMG/M
3300012975\|Ga0134110_10141654	All Organisms → cellular organisms → Bacteria → Terrabacteria group	990	Open in IMG/M
3300012976\|Ga0134076_10030274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1967	Open in IMG/M
3300012976\|Ga0134076_10055472	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1503	Open in IMG/M
3300014154\|Ga0134075_10021715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	2558	Open in IMG/M
3300015356\|Ga0134073_10304499	All Organisms → cellular organisms → Bacteria → Terrabacteria group	570	Open in IMG/M
3300015358\|Ga0134089_10040816	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1667	Open in IMG/M
3300015358\|Ga0134089_10044441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1605	Open in IMG/M
3300017654\|Ga0134069_1046856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1355	Open in IMG/M
3300017654\|Ga0134069_1094695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	970	Open in IMG/M
3300017654\|Ga0134069_1318486	All Organisms → cellular organisms → Bacteria → Terrabacteria group	554	Open in IMG/M
3300017656\|Ga0134112_10044313	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300017656\|Ga0134112_10174260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	834	Open in IMG/M
3300017657\|Ga0134074_1353314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	542	Open in IMG/M
3300017659\|Ga0134083_10038327	All Organisms → cellular organisms → Bacteria	1774	Open in IMG/M
3300018431\|Ga0066655_10009348	All Organisms → cellular organisms → Bacteria	4178	Open in IMG/M
3300018431\|Ga0066655_10011690	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3832	Open in IMG/M
3300018433\|Ga0066667_10479191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1021	Open in IMG/M
3300018468\|Ga0066662_10075298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	2282	Open in IMG/M
3300018468\|Ga0066662_10964735	All Organisms → cellular organisms → Bacteria → Terrabacteria group	842	Open in IMG/M
3300018482\|Ga0066669_10138446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1768	Open in IMG/M
3300025910\|Ga0207684_10614497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	928	Open in IMG/M
3300025922\|Ga0207646_10000111	All Organisms → cellular organisms → Bacteria	112089	Open in IMG/M
3300025922\|Ga0207646_10008223	All Organisms → cellular organisms → Bacteria	10484	Open in IMG/M
3300025929\|Ga0207664_11024507	All Organisms → cellular organisms → Bacteria → Terrabacteria group	739	Open in IMG/M
3300026295\|Ga0209234_1252874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	573	Open in IMG/M
3300026298\|Ga0209236_1015446	All Organisms → cellular organisms → Bacteria	4388	Open in IMG/M
3300026323\|Ga0209472_1099988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1158	Open in IMG/M
3300026323\|Ga0209472_1311340	All Organisms → cellular organisms → Bacteria → Terrabacteria group	505	Open in IMG/M
3300026327\|Ga0209266_1023736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	3351	Open in IMG/M
3300026327\|Ga0209266_1109884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1189	Open in IMG/M
3300026330\|Ga0209473_1054610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1735	Open in IMG/M
3300026334\|Ga0209377_1085006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1338	Open in IMG/M
3300026342\|Ga0209057_1031066	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2802	Open in IMG/M
3300026342\|Ga0209057_1049193	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2003	Open in IMG/M
3300026527\|Ga0209059_1090751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	1274	Open in IMG/M
3300026536\|Ga0209058_1033845	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	3112	Open in IMG/M
3300026540\|Ga0209376_1089243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1614	Open in IMG/M
3300027882\|Ga0209590_10121472	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1588	Open in IMG/M
3300031740\|Ga0307468_100701064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	846	Open in IMG/M
3300032205\|Ga0307472_101411984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	676	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	89.13%
Host-Associated	Host-Associated	10.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.13%
Plants	Host-Associated → Plants	10.87%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere	9.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.09%
Loam	Environmental → Terrestrial → Soil → Loam	13.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	34.06%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.45%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.72%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.72%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	23.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	19.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.22%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	11.59%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	10.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	9.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.45%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.72%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012972	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25385J37094_100001473	3300002558	Grasslands Soil	MLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ*
JGI25383J37093_1000057810	3300002560	Grasslands Soil	VAMLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ*
Ga0062595_1000182502	3300004479	Soil	VPQQVLPPATEPPVAQLCSKPVVTSADGNASPLFCLSGAVNVLAWRYYADISQSILSLGLNPSEGQPQSAMCDDIQHNGATRATEPDGYRLAKAYYGWTFSFNPATVSCQ*
Ga0062595_1010225131	3300004479	Soil	ADGNATPLLCRDGAVNVQAWSFYSDISQDILGLGLNPAPGQPLAAMCDDIAHNGASRAEEASGYRLAAAYYGWTFKIDPTKITCQ*
Ga0066674_102711062	3300005166	Soil	VASGDETPVAQQVLPPATDQPVAKLCAKPIVTTADGNALPLACRNGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAMDPTGVTCQ*
Ga0066674_104644871	3300005166	Soil	VAQQVLPPATDPPAANLCTKPVTTTSDGNVTPLFCKSGAVNVQAWTFYSSISASILGLGLNPSNGQPQSAMCDDIAHNGATRTQEANGYRLAAAYYGWAFTFDPTKV
Ga0066683_102065782	3300005172	Soil	VAQQVLPPATDPPAANLCTKPVTTTSDGNVTPLFCRSGAVNVQAWTFYSSISASILGLGLNPSNGQPQSAMCDDIAHNGATRAQEANGYRLAAAYYGWAFTFDPTKVTCQ*
Ga0066684_105019782	3300005179	Soil	PSPTSTSDETPIAQQVLPPAQDPPLAMLCSKPIAAAADGNATPLFCSNGAVNVLAWKFYADISASILGLGLNPSPEQPKSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFALDPAKVTCQ*
Ga0066676_100004848	3300005186	Soil	VASGDETPVAQQVLPPATDQPVAKLCAKPIVTTADGNALPLACRNGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAMDPTEVTCQ*
Ga0066676_107342241	3300005186	Soil	GDETPVPQQVLAPAQDLPVAMLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ*
Ga0066388_1065068431	3300005332	Tropical Forest Soil	PTAQLCSKPISTTSDGNASPLFCSTGAVNVLAWAFYGAVSASILSLGLNPSSGQPQAAMCDDIAHNGAKQAQEVSAYRLAAAYYGWTFTFDPTKVTCS*
Ga0008090_144514382	3300005363	Tropical Rainforest Soil	VESHVLAPATDPPVAKLCSTPITTTSDQNATPLFCHDGAINVLAWAFYGAVGVSIMSLGLNPNNGQPQAAMCDDMTHNGAKPSQEANAYRLAAAYYGWSFTFDPTKVTCQ*
Ga0070703_100133052	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VPSQVLPPANDPPVGTLCSKPIVSAAGGNATPLLCRDGSVNVQAWKFYSDISQSILGLGQNPNEGQPQAAMCDDIAHNGATRSTEPSGYRLAAAYYGWTFTFDPAKVACP*
Ga0070694_1011236392	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	PSPTSSSDETPVAQQVLPPAQDPPVAMLCSKPITAATNGNASPLFCSTGAVNVLAWKFYADISASILGLGLNPNQGQPESAMCDDLAHNGANRSEEVNGYRLAAAYYGWTFNIDPAKVTC
Ga0070708_1000626674	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLCSKPITAAADGNANPLFCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ*
Ga0070708_1018111151	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	DGNATPLFCSNGAVNVLAWAYYGAVSASILSLGLNPSSGQPQAAMCDDIAHNGAKQAQEVSAYHLAATYYGWAFTFDPTRVTCS*
Ga0066682_100527282	3300005450	Soil	VAQQVLPPATDPPAANLCTKPVTTTSDGNVTPLFCRSGAVNVQAWTFYSSISASILGLGLNPSNGQPQSAMCDDIAHNGATRAQEANGYRLAAAYYGWAFTFDPTKVSCQ*
Ga0066681_101005462	3300005451	Soil	VPQQVLPPATDPPVAQLCSKAVVASADGNASPLFCLSGAVNVLAWQFYSDISQSILSLGLNPNEGQPQAAMCDDIAHNGATRATEPNGYRLAKAYYGWTFTFNPATVTC
Ga0066681_102493411	3300005451	Soil	AQDLPVAMLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ*
Ga0070706_1000745562	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VLPPATDPPVAQLCSKPIATTSDGNATPLFCSNGAVNVLAWAYYGAVSASILSLGLNPSSGQPQAAMCDDIAHNGAKQAQEVSAYHLAATYYGWAFTFDPTRVTCS*
Ga0070698_1000431262	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VLPPATDPPAAQLCSKPIATTSDGNATPLLCSNGAVNVLAWAFYGAVSASILSLGLNPSSGQPQAAMCDDIAHNGAKMTQEVSAYRLAAAYYGWTFSLDPTRLTCS*
Ga0070699_1003593322	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	VASGDETPVAQQVLPPATDQPVVKLCTKPIVTTADGNAIPLACSSGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAIDPAGVTCQ*
Ga0066697_100193914	3300005540	Soil	VAQQVLPPASDPPAANLCTKPVTTTSDGNVTPLFCKSGAVNVQAWTFYSSISASILGLGLNPSNGQPQSAMCDDIAHNGATRTQEANGYRLAAAYYGWAFTFDPTKVTCQ*
Ga0066697_107034691	3300005540	Soil	GNASPLFCLSGAVNVLAWQFYSNISQSILSLGLNPNEGQPQAAMCDDIAHNGATRATEPNGYRLAKAYYGWTFTFNPATVTC*
Ga0070695_1000350353	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VPQQVLPPATDPPLAQLCSKAIVSSAEGNASPLFCLSGAVNVQAWQFYSNISQSILSLGLNPNEGQPQSAMCDDIAHNGATRATEPNGYRLAKAYYGWTFTFNPATVAC*
Ga0070695_1002219112	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	VPQQVLPPATDPPVAQLCSKAVVAAADGNASPLFCLSGAVNVQAWQFYSNISQSILSLGLNPNEGQPQAAMCDDIAHNGATRATEPNGYRLAKAYYGWTFTFNPATVSCQ*
Ga0070695_1006932252	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	KAVVVSQDGNALPLFCLSGAVNVQAWQFYADISQSVLSLGLNPNEGQPQSAMCDDIQHNGATRATEPNGYRLAKAYYGWTFSFNPATVSCQ*
Ga0066707_102333181	3300005556	Soil	SACSFGQTASSATPSPTPTVQASPSPSPTSTGDETPVPQQVLAPAQDLPVAMLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ*
Ga0066698_100189274	3300005558	Soil	VPQQVLPPATDPPLAQLCSKAVVASADGNASPLFCLSGAVNVLAWQFYSNISQSILSLGLNPNEGQPQAAMCDDIAHNGATHATEPNGYRLAKAYYGWTFTFNPATVTC*
Ga0068855_1024401422	3300005563	Corn Rhizosphere	ADGNASPLFCLSGAVNVQAWQFYADISQSVLSLGLNPNEGQPQSAMCDDIQHNGATRATEPNGYRLAKAYYGWTFSFNPATVSCQ*
Ga0066702_100717272	3300005575	Soil	VARQVLPPATDPPVVDLCSKPVVNTADGNVVPLQCSTGALNVQAWTYYSTISASILGLGLNPSPAQPQSAMCDDIQHNGASRAQEPSGYRLAKAYYGWTFDVDPNKLTCG*
Ga0066708_103342452	3300005576	Soil	VPQQVLPPATDPPVAQLCSKAVVASADGNASPLFCLSGAVNVLAWQFYSDISQSILSLGLNPNEGQPQAAMCDDIAHNGATRATEPNGYRLAKAYYGWTFTFNPATVTCQ*
Ga0066654_100521363	3300005587	Soil	PAQDPPLAMLCSKPIAAAADGNATPLFCSNGAVNVLAWKFYADISASILGLGLNPSPEQPKSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFALDPAKVTCQ*
Ga0066651_103952802	3300006031	Soil	DETPVAQQVLPPATDPPAANLCTKPVTTTSDGNVTPLFCRSGAVNVQAWTFYSSISASILGLGLNPSNGQPQSAMCDDIAHNGATRTQEANAYRLAAAYYGWAFTFDPTKVTCQ*
Ga0066656_103016992	3300006034	Soil	VPQQVLAPAQDLPVAMLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ*
Ga0066656_104787541	3300006034	Soil	VVASADGNASPLFCLSGAVNVLAWQFYSNISQSILSLGLNPNEGQPQAAMCDDIAHNGATHATEPNGYRLAKAYYGWTFTFNPATVTC*
Ga0066652_1002607693	3300006046	Soil	PVAMLCSKPITAATNGNASPLFCSTGAVNVLAWKFYADISASILGLGLNPNQGQPESAMCDDLAHNGANRSEEVNGYRLAAAYYGWTFNIDPAKVTC*
Ga0066652_1015681471	3300006046	Soil	VPQQVLPPATDPPVAQLCSKAVVASADGNASPLFCLSGAVNVLAWQFYSDISQSILSLGLNPNEGQPQAAMCDDIAHNGATRATEPNGYRLAKAYYGWTFTFNPATVTC*
Ga0070716_1003757561	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	DETPVAQQVLPPAQDPPVTMLCSKPITAAANGNASPLFCSTGAVNVLAWKFYADISASILGLGLNPNQGQPESAICDDLAHNGANRSEEVNGYRLAAAYYGWTFNIDPAKVTC*
Ga0079221_103447942	3300006804	Agricultural Soil	VPAQVLPPATDPPAAQLCAKAIVQTADGNATPLTCSNGALNVQAWTYYSTISASILGLGANPSPAQAPAAMCDDIAHNGASRAQESTAYRLAHLYYGWTFDVDPTKVTCS*
Ga0075433_100598712	3300006852	Populus Rhizosphere	MPVPDQVLPPATDLPVAKLCSKAVVAGADGNASPLFCRDGAVNVNAWAFYSEISQSILSLGLNPNEGQPQSAMCDDIAHNGATKATEVNGYRLAKAYYGWTFTFNPAKVTCQ*
Ga0075433_107506801	3300006852	Populus Rhizosphere	VASGDETPVAQQVLPPATDQPVVKLCTKPIVTTADGNALPLACSNGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAIDPTGVTCQ*
Ga0075433_109577951	3300006852	Populus Rhizosphere	VPQQVLPPATDPPRAELCAKAVVSAADGNASPLFCLSGAVNVQAWQFYSNISQSILSLGLNPNEGQPQSAMCDDIAHNGATRATEPNGY
Ga0075425_1011971702	3300006854	Populus Rhizosphere	SDEMPVPDQVLPPATDLPVAKLCSKAVVAGADGNASPLFCRDGAVNVNAWAFYSEISQSILSLGLNPNEGQPQSAMCDDVAHNGATKATEVNGYRLAKAYYGWTFTFDPAKVTCQ*
Ga0075434_1000289075	3300006871	Populus Rhizosphere	MPVPDQVLPPATDLPVAKLCSKAVVAGADGNASPLFCRDGAVNVNAWAFYSEISQSILSLGLNPNEGQPQSAMCDDIAHNGATKATEVNGYRLAKAYYGWTFTFDPARVTCQ*
Ga0075434_1023558851	3300006871	Populus Rhizosphere	VPQQVLPPATDPPRAELCAKAVVSAADGNASPLFCLSGAVNVQAWQFYSNISQSILSLGLNPNEGQPQSAMCDDIAHNGATRATEPNGYRLAKAYYGWTFTFDPTKVSCQ*
Ga0075426_109838041	3300006903	Populus Rhizosphere	GNASPLFCRDGAVNVNAWAFYSEISQSILSLGLNPNEGQPQSAMCDDIAHNGATKATEVNGYRLAKAYYGWTFTFDPAKVTCQ*
Ga0075436_1003887582	3300006914	Populus Rhizosphere	MPVPDQVLPPATDLPVAKLCSKAVVAGADGNASPLFCRDGAVNVNAWAFYSEISQSILSLGLNPNEGQPQSAMCDDVAHNGATKATEVNGYRLAKAYYGWTFTFDPAKVTCQ*
Ga0075436_1007672382	3300006914	Populus Rhizosphere	VPQQVLPPATDPPRAELCAKAVVSAADGNASPLFCLSGAVNVQAWQFYSNISQSILSLGLNPNEGQPQSAMCDDIAHNGATRATEPNGYRLAKAYYGWTFTFDP
Ga0075435_1000402362	3300007076	Populus Rhizosphere	MPVPDQVLPPATDLPVAKLCSKAVVAGADGNASPLFCRDGAVNVNAWAFYSEISQSILSLGLNPNEGQPQSAMCDDIAHNGATKATEVNGYRLAKAYYGWTFTFDPAKVTCQ*
Ga0075435_1003710992	3300007076	Populus Rhizosphere	VPQQVLPPATDPPRAELCAKAVVAAADGNASPLFCLSGAVNVQAWQFYSNISQSILSLGLNPNEGQPQSAMCDDIAHNGATRATEPNGYRLAKAYYGWTFTFDPTKVSCQ*
Ga0066710_1002514892	3300009012	Grasslands Soil	VASGDETPVAQQVLPPATDQPVAKLCAKPIVTTADGNALPLACRNGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAIDPTGVTCQ
Ga0066710_1044786752	3300009012	Grasslands Soil	PLFCSTGAVNVLAWKFYADISASILALGLNPNPGQPQSAMCDDIAHNGANRSEEVSGYKLAAAYYGWTFTFDPAKVTCQ
Ga0099827_100862702	3300009090	Vadose Zone Soil	VPQQVLPPATDPPIAMLCSKPIVSGADGNASPLFCRDGAVNVLAWKFYSDISQSILGLGQNPNEGQPQAAMCDDIAHNGATSATEVSGYRLAKAYYAWTFTFDPTKVKCQ*
Ga0066709_1000039372	3300009137	Grasslands Soil	VASGDETPVAQQVLPPATDQPVVKLCARPIVTTSDGNALPLACSNGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAMDPTGVTCQ*
Ga0066709_1014243472	3300009137	Grasslands Soil	MLCSKPITAAADGNANPLFCSTGAVNVLAWKFYADISASILALGLNPNPGQPQSAMCDDIAHNGANRSEEVSGYKLAAAYYGWTFTFDPAKVTCQ*
Ga0066709_1033645381	3300009137	Grasslands Soil	MLCSKPIAAAADGNATPLFCSNGAVNVLAWKFYADISASILGLGLNPSPEQPKSAMCDDIAHNGANRSEEVNGYKLAAAYYGWT
Ga0114129_101842972	3300009147	Populus Rhizosphere	VASGDETPVAQQVLPPATDQPVVKLCAKPIVTTADGNALPLACSNGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAMDPTGVTCQ*
Ga0075423_119311292	3300009162	Populus Rhizosphere	DEVSVPQQVLPPATDPPVAQLCSKAIVSSAEGNASPLFCLSGAVNVQAWQFYSNISESILSLGLNPNEGQPQSAMCDDIAHNGATRATEPNGYRLAKAYYGWTFTFDPTKVSCQ*
Ga0126382_110257841	3300010047	Tropical Forest Soil	PATDPPVARLCSTPITTTSDGNAGPLFCHDGSVNVLAWAYYGAVGVSIMSLGLNPANGQPQAAMCDDMKHNGAKASQEAIAYRLAAAYYGWSFSFDPTKVTCQ*
Ga0134070_101655212	3300010301	Grasslands Soil	PVAQQVLPPATDPPAANLCTKPVTTTSDGNVTPLFCRSGAVNVQAWTFYSSISASILGLGLNPSNGQPQSAMCDDIAHNGATRAQEANGYRLAAAYYGWAFTFDPTKVSCQ*
Ga0134070_103066752	3300010301	Grasslands Soil	ALAVLVLLLSACSFGQTASSATPSPTPTVQASPSPSPTSTGDETPVPQQVLAPAQDLPVAMLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ*
Ga0134070_104352871	3300010301	Grasslands Soil	DPPVAQLCSKAVVASADGNASPLFCLSGAVNVLAWQFYSNISQSILSLGLNPNEGQPQAAMCDDIAHNGATHATEPNGYRLAKAYYGWTFTFNPATVTC*
Ga0134088_100079811	3300010304	Grasslands Soil	VASGDETPVAQQVLPPATDQPVAKLCAKPIVTTADGNALPLACRNGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFA
Ga0134109_102137171	3300010320	Grasslands Soil	VAQQVLPPATDPPAANLCTKPVTTTSDGNVTPLFCRSGAVNVQAWTFYSSISASILGLGLNPSNGQPQSAICDDIAHNGATRAQEANGYRLAAAY
Ga0134067_103862001	3300010321	Grasslands Soil	DETPIAQQVLPPAQDPPLAMLCSKPIAAAADGNATPLFCSSGAVNVLAWKFYADISASILGLGLNPSPEQPKSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFALDPAKVTCQ*
Ga0134111_102287312	3300010329	Grasslands Soil	TPVAQQVLPPATDPPAANLCTKPVTTTSDGNVTPLFCKSGAVNVQAWTFYSSISASILGLGLNPSNGQPQSAMCDDIAHNGATRAQEANGYRLAAAYYGWAFTFDPTKVTCQ*
Ga0134080_100531391	3300010333	Grasslands Soil	GDETPVAQQVLPPATDQPVAKLCAKPIVTTADGNALPLACRNGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAMDPTGVTCQ*
Ga0134063_100421222	3300010335	Grasslands Soil	SDGNVTPLLCKSGAVNVQAWTFYSSISASILGLALNPSNGQPQSAMCDDIAHNGATRTQEANGYRLAAAYYGWAFTFDPTKVTCQ*
Ga0134071_100403763	3300010336	Grasslands Soil	VASGDETPVAQQVLPPATDQPVVKLCARPIVTTSDGNALPLACSNGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAIDPTGVTCQ*
Ga0126378_107146831	3300010361	Tropical Forest Soil	AEPAPSPSPSPSSAEVAVDRQVLPPANDPPVANLCRATITVGSDGNASPLFCHSGALNVLAWSYYGAISSSILSLGLNPSSGQPQSAMCDDIAHNGAKAVQEANAYKLAAAYYGWSFTFDPTKVTCP*
Ga0134128_100406895	3300010373	Terrestrial Soil	LPQQVLPPATDLPVAQLCSKPVVASADGNASPLFCLSGAVNVQAWQFYADISQSVLSLGLNPNEGQPQSAMCDDIQHNGATRATEPNGYRLAKAYYGWTFSFNPATVSCQ*
Ga0134121_123235002	3300010401	Terrestrial Soil	PVAQLCSKAVVAAADGNASPLFCLSGAVNVQAWQFYSNISQSILSLGLNPNEGQPQAAMCDDIAHNGATRATEPNGYRLAKAYYGWTFTFNPATVSCQ*
Ga0137389_116210641	3300012096	Vadose Zone Soil	AQRVLPPATDPPIAQLCSKPIATTSDGNATPLFCSNGAVNVLAWAYYGAVSASILSLGLNPSSGQPQAAMCDDIAHNGAKQAQEVSAYHLAATYYGWAFTFDPTRVTCS*
Ga0137388_102305032	3300012189	Vadose Zone Soil	VAVSPSPTATLQASPSPSPTSTGDETPVAQRVLPPATDPPIAQLCSKPIATTSDGNATPLFCSNGAVNVLAWAYYGAVSASILSLGLNPSSGQPQAAMCDDIAHNGAKQAQEVSAYHLAATYYGWAFTFDPTRVTCS*
Ga0137364_111065961	3300012198	Vadose Zone Soil	MLCARPITAAADGNANPLFCSTGAVNVLAWKFYADISASILALGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ*
Ga0137382_100002198	3300012200	Vadose Zone Soil	MLCSKPIAAAADGNATPLFCSSGAVNVLAWKFYADISASILGLGLNPSPEQPKSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFALDPAKVTCQ*
Ga0137382_100069393	3300012200	Vadose Zone Soil	MLCSKPITAAADGNANPLFCSTGAVNVLAWKFYADISASILALGLNPNPGQPQSAMCDDIAHNGANRSEEVSGYKLAAAYYGWTFTFDPAKVSCQ*
Ga0137365_111322572	3300012201	Vadose Zone Soil	VPDQVLPPATDPPVAQLCSKAIVASADGNASPLFCLSGAVNVRAWQFYSNISQSILSLGLNPNEGQPQAAMCDDIAHNGATRATEPNGYRLAKAYYGWTFTFNPATVTC*
Ga0137362_103835982	3300012205	Vadose Zone Soil	MLCSKPIVAAANGNATPLFCSNGAVNVLAWKFYADISASILGLGLNPSPSQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTLDPAKVTCQ*
Ga0137381_100749961	3300012207	Vadose Zone Soil	MLCSKPIAAAADGNANPLFCSTGAVNVLAWRFYADISASILALGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ*
Ga0137376_104398582	3300012208	Vadose Zone Soil	MLCSKPIAAAADGNATPLFCSNGAVNVLAWKFYADISASILGLGLNPSPEQPKSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFALDPAKVTCQ*
Ga0137376_109640301	3300012208	Vadose Zone Soil	DPPVAMLCSKPITAAADGNANPLFCSTGAVNVLAWKFYADISASILALGLNPNPGQPQSAMCDDIAHNGANRSEEVSGYKLAAAYYGWTFTFDPAKVSCQ*
Ga0137376_111049242	3300012208	Vadose Zone Soil	MLCSKPITAAADGNANPLFCSTGAVNVLAWRFYADISASILALGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ*
Ga0137378_109604672	3300012210	Vadose Zone Soil	MLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVSGYKLAAAYYGWTFTFDPAKVTCQ*
Ga0137377_104371842	3300012211	Vadose Zone Soil	VPQQVLPPATDPPVAQLCSKAVAASADGNASPLFCLSGAVNVLAWQFYSDISQSILSLGLNPNEGQPQAAMCDDIAHNGATRATEPNGYRLAKAYYGWTFTF
Ga0137377_118329582	3300012211	Vadose Zone Soil	MLCSKPITAAADGNANPLFCSTGAVNVLAWKFYADISASILALGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ*
Ga0137370_102575032	3300012285	Vadose Zone Soil	TGDETQVAQQVLAPAQDPPVAMLCSKPITAAADGNANPLFCSTGAVNVLAWKFYADISASILALGLNPNPGQPQSAMCDDIAHNGANRSEEVSGYKLAAAYYGWTFTVDPANVTCQ*
Ga0137370_105084662	3300012285	Vadose Zone Soil	ATPVASSDETPVAQQVLPPATDPPAANLCTKPVTTTSDGNVTPLFCKSGAVNVQAWTFYSSISASILGLGLKPSNGQPQSAMCDDIAHNGATRTQEANGYRLAAAYYGWAFTFDPTKVTCQ*
Ga0137372_111207441	3300012350	Vadose Zone Soil	VPEQVLPPATDPPVAQLCSKAIVASADGNASPLFCLSGAVNVRAWQFYSNISQSILSLGLNPNEGQPQAAMCDDIAHNGATRATEPNGYRLAKAYYGWTFTFNPATVPCQ*
Ga0137367_102935272	3300012353	Vadose Zone Soil	LAMLCSKPIVAAADGNATPLFCHDGAVNVLAWKYYSDISQSVLSLGLNPNEGQPQAAMCDDIAHNGATRSTEPSGYRLARAYYGWTFSFDPAKVTCQ*
Ga0137371_101333172	3300012356	Vadose Zone Soil	VAQQVLPPATDPPAANLCTKPVTTTSDGNVTPLFCKSGAVNVQAWTFYSSISASILGLGLNPSNGQPQSAMCDDIAHNGATRTQEANGYRLAAAYYGWAFTFDPTKVTCQ*
Ga0134077_100329853	3300012972	Grasslands Soil	VASGDETPVAQQVLPPATDQPVAKLCAKPIVTTADGNALPLACRDGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAMDPTGVTCQ*
Ga0134110_101416541	3300012975	Grasslands Soil	TPIAQQVLPPAQDPPLAMLCSKPIAAAADGNATPLFCSNGAVNVLAWKFYADISASILGLGLNPSPEQPKSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPANVTCQ*
Ga0134076_100302742	3300012976	Grasslands Soil	VASGDETPVAQQVLPPATDQPVVKLCARPIVTTSDGNALPLACSNGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAMDPTEVTCQ*
Ga0134076_100554721	3300012976	Grasslands Soil	KPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ*
Ga0134081_103602872	3300014150	Grasslands Soil	DGNALPLACRNGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDIAHNGATRTQEANGYRLAAAYYGWAFTFDPTKVTCQ*
Ga0134075_100217153	3300014154	Grasslands Soil	MLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGW
Ga0134073_103044992	3300015356	Grasslands Soil	LPPATDQPVAKLCAKPIVTTADGNALPLACRNGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAMDPTGVTCQ*
Ga0134089_100408163	3300015358	Grasslands Soil	PTVQASPSPSPTSTGDETPVPQQVLAPAQDLPVAMLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ*
Ga0134089_100444412	3300015358	Grasslands Soil	VASGDETPVAQQVLPPATDQPVAKLCAKPIVTTADGNALPLACRDGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAIDPTGVTCQ*
Ga0134069_10468562	3300017654	Grasslands Soil	MLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKV
Ga0134069_10946952	3300017654	Grasslands Soil	VASGDETPVAQQVLPPATDQPVAKLCAKPIVTAADGNALPLACRNGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAMDPTGVTCQ
Ga0134069_13184861	3300017654	Grasslands Soil	VTASLRHWPPPATDPPAANLCTKPVTTTFDGNVTPLFCRSGAVNVQAWTFYSSISASILGLGLNPSNGQPQSAMCDDIAHNGATRAQEANGYRLAAAYYGWAFTFDPTKVSCQ
Ga0134112_100443132	3300017656	Grasslands Soil	VASGDETPVAQQVLPPATDQPVVKLCARPIVTTSDGNALPLACSNGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAMDPTGVTCQ
Ga0134112_101742601	3300017656	Grasslands Soil	TSTGDETPVPQQVLAPAQDLPVAILCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ
Ga0134074_13533141	3300017657	Grasslands Soil	LPVAMLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ
Ga0134083_100383273	3300017659	Grasslands Soil	SPSPVASGDETPVAQQVLPPATDQPVAKLCAKPIVTTADGNALPLACRNGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAIDPTGVTCQ
Ga0134083_101597012	3300017659	Grasslands Soil	SACSFGQTASSATPSPTPTVQASPSPSPTSTGDETPVPQQVLAPAQDLPVAMLCSKPITAAADGNANPLFCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ
Ga0066655_100093483	3300018431	Grasslands Soil	VAMLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ
Ga0066655_100116902	3300018431	Grasslands Soil	VASGDETPVAQQVLPPATDQPVAKLCAKPIVTTADGNALPLACRNGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAMDPTEVTCQ
Ga0066667_104791911	3300018433	Grasslands Soil	TPTVQASPSPSPTSTGDETPVPQQVLAPAQDLPVAMLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ
Ga0066662_100752982	3300018468	Grasslands Soil	MLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ
Ga0066662_109647351	3300018468	Grasslands Soil	SSGEVSVARQVLPPATDPPVVDLCSKPVVNTADGNVVPLQCSTGALNVQAWTYYSTISASILGLGLNPSPAQPQSAMCDDIQHNGASRAQEPSGYRLAKAYYGWTFDVDPNKLTCG
Ga0066669_101384462	3300018482	Grasslands Soil	VAQQVLPPATDPPAANLCTKPVTTTSDGNVTPLFCRSGAVNVQAWTFYSSISASILGLGLNPSNGQPQSAMCDDIAHNGATRAQEANGYRLAAAYYGWAFTFDPTKVSCQ
Ga0207684_106144972	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VLPPATDPPVAQLCSKPIATTSDGNATPLFCSNGAVNVLAWAYYGAVSASILSLGLNPSSGQPQAAMCDDIAHNGAKQAQEVSAYHLAATYYGWAFTFDPTRVTCS
Ga0207646_1000011139	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VAVSPSPTATLEASPSPSPSSTGDETPVAQHVLPPATDPPAAQLCSKPIATTSDGNATPLLCSNGAVNVLAWAFYGAVSASILSLGLNPSSGQPQAAMCDDIAHNGAKMSQEVSAYRLAAAYYGWTFSFDPTRLTCS
Ga0207646_1000822313	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VPSQVLPPANDPPVGTLCSKPIVSAAGGNATPLLCRDGSVNVQAWKFYSDISQSILGLGQNPNEGQPQAAMCDDIAHNGATRSTEPSGYRLAAAYYGWTFTFDPAKVACP
Ga0207646_100665243	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VAVSPSPTATVQASPSPSPTSTGDETPVAQRVLPPATDPPVAQLCSKPIATTSDGNATPLFCSNGAVNVLAWAYYGAVSASILSLGLNPSSGQPQAAMCDDIAHNGAKQAQEVSAYHLAATYYGWAFTFDPTRVTCS
Ga0207646_110196542	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VAVSPSPTATLEASPSPSPTSTGDETPVAQHVLPPATDPPAAQLCSKPIATTSDGNATPLLCSNGAVNVLAWAFYGAVSASILSLGLNPSSGQPQAAMCDDIAHNGAKMTQEVSAYRLAAAYYGWTFSFDPTRLTCS
Ga0207664_110245071	3300025929	Agricultural Soil	LCAKAIVQTADGNATPLTCSNGALNVQAWTYYSTISASILGLGANPSPAQAPAAMCDDIAHNGASRAQESTAYRLAHLYYGWTFDVDTTKVTCS
Ga0207667_117464842	3300025949	Corn Rhizosphere	ASADGNASPLFCLSGAVNVQAWQFYADISQSVLSLGLNPNEGQPQSAMCDDIQHNGATRATEPNGYRLAKAYYGWTFSFNPATVSCQ
Ga0209234_12528742	3300026295	Grasslands Soil	SKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ
Ga0209236_10154464	3300026298	Grasslands Soil	MLCSKPITAAADGNANPLFCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ
Ga0209472_10999882	3300026323	Soil	VPQQVLPPATDPPVAQLCSKAVVASADGNASPLFCLSGAVNVLAWQFYSDISQSILSLGLNPNEGQPQAAMCDDIAHNGATRATEPNGYRLAKAYYGWTF
Ga0209472_13113402	3300026323	Soil	EVPVPQQVLPPATDPPVAQLCSKAVVASADGNASPLFCLSGAVNVLAWQFYSDISQSILSLGLNPNEGQPQAAMCDDIAHNGATRATEPNGYRLAKAYYGWTFTFNPATVTCQ
Ga0209266_10237364	3300026327	Soil	VASGDETPVAQQVLPPATDQPVAKLCAKPIVTTADGNALPLACRNGALNVTAWKFYATISASVLGLGLNPTQGQVVSAMCDDMAHNGATRAQEPNGYRLARAYYGWTFAMDPTGVTCQ
Ga0209266_11098841	3300026327	Soil	VAQQVLPPATDPPAANLCTKPVTTTSDGNVTPLFCRSGAVNVQAWTFYSSISASILGLGLNPSNGQPQSAMCDDIAHNGATRAQEANGYRLA
Ga0209473_10546101	3300026330	Soil	TAVAQQVLPPATDPPAGNLCSKPITTTADGRAAPLLCKSGAVNVLAWAYYGAVGTSILSLGLNPNNGQPQSAMCDDIAHNGAKPAQEADAYRLAAAYYGWTFTFDPTKVTCQ
Ga0209377_10850062	3300026334	Soil	GDETPVPQQVLAPAQDLPVAMLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ
Ga0209057_10310664	3300026342	Soil	PMTCTPSGSPSATPVASSDETPVAQQVLPPASDPPAANLCTKPVTTTSDGNVTPLFCKSGAVNVQAWTFYSSISASILGLGLNPSNGQPQSAMCDDIAHNGATRTQEANGYRLAAAYYGWAFTFDPTKVTCQ
Ga0209057_10491933	3300026342	Soil	QASPSPSPTSTGDETPVPQQVLAPAQDLPVAMLCSKPITAAADGNANPLLCSTGAVNVLAWKFYADISASILGLGLNPNPGQPQSAMCDDIAHNGANRSEEVNGYKLAAAYYGWTFTFDPAKVTCQ
Ga0209059_10907512	3300026527	Soil	VARQVLPPATDPPGVDLCSKPVVNTADGNVVPLQCSTGALNVQAWTYYSTISASILGLGLNPSPAQPQSAMCDDIQHNGASRAQEPSGYRLAKAYYGWTFDVDPNKLTCG
Ga0209058_10338452	3300026536	Soil	VPQQVLPPATDPPLAQLCSKAVVASADGNASPLFCLSGAVNVLAWQFYSNISQSILSLGLNPNEGQPQAAMCDDIAHNGATHATEPNGYRLAKAYYGWTFTFNPATVTC
Ga0209376_10892432	3300026540	Soil	VAQQVLPPASDPPAANLCTKPVTTTSDGNVTPLFCKSGAVNVQAWTFYSSISASILGLGLNPSNGQPQSAMCDDIAHNGATRTQEANGYRLAAAYYGWAFTFDPTKVTCQ
Ga0209590_101214721	3300027882	Vadose Zone Soil	STGDETPVAQRVLPPATDPPVAQLCSKPIATTSDGNAIPLLCSSGAVNVLAWAYYGAVSASILSLGLNPSSGQPQAAMCDDMAHNGAKRTQEVSAYRLAAAYYGWTFTLDPSRVTCP
Ga0307468_1007010642	3300031740	Hardwood Forest Soil	VPQQVLPPATDPPVAQLCSKAVVASADGNSSPLFCLSGAVNVQAWQFYSNISQSILSLGLNPNEGQPQSAMCDDIAHNGATRATEPNG
Ga0307472_1014119842	3300032205	Hardwood Forest Soil	VPQQVLPPATDPPVAQLCSKAIVSSADGNASPLFCLSGAVNVLAWQFYSNISESVLSLGLNPNEGQPQSAMCDDIAHNGATRATEPNG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F055996

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences