Metagenome / Metatranscriptome Family F056025

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056025
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	48 residues
Representative Sequence	GTFIIDPADKSQAAAISALGMKVAILPTVMKTRAQKRKLARALLSL
Number of Associated Samples	110
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.17 %
% of genes near scaffold ends (potentially truncated)	97.83 %
% of genes from short scaffolds (< 2000 bps)	89.13 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (69.565 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (38.406 % of family members)
Environment Ontology (ENVO)	Unclassified (38.406 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (43.478 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 33.78% β-sheet: 10.81% Coil/Unstructured: 55.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00962	A_deaminase	13.77
PF01613	Flavin_Reduct	13.77
PF03807	F420_oxidored	10.87
PF10067	DUF2306	4.35
PF03301	Trp_dioxygenase	2.90
PF02470	MlaD	2.17
PF01145	Band_7	0.72
PF12158	DUF3592	0.72
PF05598	DUF772	0.72
PF11412	DsbC	0.72
PF08532	Glyco_hydro_42M	0.72
PF13226	DUF4034	0.72
PF03544	TonB_C	0.72
PF06271	RDD	0.72
PF00069	Pkinase	0.72
PF02738	MoCoBD_1	0.72
PF07244	POTRA	0.72
PF03747	ADP_ribosyl_GH	0.72
PF00326	Peptidase_S9	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG1816	Adenosine/6-amino-6-deoxyfutalosine deaminase	Nucleotide transport and metabolism [F]	13.77
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	13.77
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.90
COG3483	Tryptophan 2,3-dioxygenase (vermilion)	Amino acid transport and metabolism [E]	2.90
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.72
COG1397	ADP-ribosylglycohydrolase	Posttranslational modification, protein turnover, chaperones [O]	0.72
COG1714	Uncharacterized membrane protein YckC, RDD family	Function unknown [S]	0.72
COG1874	Beta-galactosidase GanA	Carbohydrate transport and metabolism [G]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.57 %
Unclassified	root	N/A	30.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	69.57 %
Unclassified	root	N/A	30.43 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	69.57 %
Unclassified	root	N/A	30.43 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.58 %
Unclassified	root	N/A	30.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.17 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	30.43 %
Unclassified	root	N/A	30.43 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.72 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.72 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.72 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.43 %
Unclassified	root	N/A	30.43 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.72 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.72 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.72 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.43 %
Unclassified	root	N/A	30.43 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.72 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.72 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.43 %
Unclassified	root	N/A	30.43 %
Dyella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella	0.72 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.72 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.43 %
Unclassified	root	N/A	30.43 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.72 %
unclassified Dyella	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → unclassified Dyella	0.72 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.43 %
Unclassified	root	N/A	30.43 %
Dyella sp. S184	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → unclassified Dyella → Dyella sp. S184	0.72 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	0.72 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.72 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	30.43 %
Unclassified	root	N/A	30.43 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.72 %
Dyella sp. S184	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → unclassified Dyella → Dyella sp. S184	0.72 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.72 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.72 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001661\|JGI12053J15887_10436321	All Organisms → cellular organisms → Bacteria	628	Open in IMG/M
3300002245\|JGIcombinedJ26739_101645315	Not Available	540	Open in IMG/M
3300002907\|JGI25613J43889_10028490	All Organisms → cellular organisms → Bacteria	1582	Open in IMG/M
3300002908\|JGI25382J43887_10136179	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300002914\|JGI25617J43924_10063353	All Organisms → cellular organisms → Bacteria	1351	Open in IMG/M
3300002916\|JGI25389J43894_1048125	Not Available	723	Open in IMG/M
3300005178\|Ga0066688_10517027	Not Available	768	Open in IMG/M
3300005332\|Ga0066388_104745488	All Organisms → cellular organisms → Bacteria	691	Open in IMG/M
3300005338\|Ga0068868_101610044	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300005363\|Ga0008090_14520996	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300005451\|Ga0066681_10443161	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300005454\|Ga0066687_10959431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300005555\|Ga0066692_10296019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1025	Open in IMG/M
3300005558\|Ga0066698_10932097	Not Available	554	Open in IMG/M
3300005561\|Ga0066699_10437347	All Organisms → cellular organisms → Bacteria	936	Open in IMG/M
3300005586\|Ga0066691_10433094	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300006031\|Ga0066651_10545656	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300006086\|Ga0075019_10794980	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300006172\|Ga0075018_10285878	All Organisms → cellular organisms → Bacteria → Acidobacteria	809	Open in IMG/M
3300006903\|Ga0075426_10593425	All Organisms → cellular organisms → Bacteria	827	Open in IMG/M
3300006954\|Ga0079219_10373629	All Organisms → cellular organisms → Bacteria	929	Open in IMG/M
3300007265\|Ga0099794_10445002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300007788\|Ga0099795_10579214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	532	Open in IMG/M
3300009012\|Ga0066710_104027409	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300009038\|Ga0099829_10636210	Not Available	887	Open in IMG/M
3300009038\|Ga0099829_11126779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300009089\|Ga0099828_10537818	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300009143\|Ga0099792_11033527	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300010159\|Ga0099796_10037531	All Organisms → cellular organisms → Bacteria → Acidobacteria	1620	Open in IMG/M
3300010335\|Ga0134063_10142236	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300010335\|Ga0134063_10721948	Not Available	517	Open in IMG/M
3300011120\|Ga0150983_14753816	Not Available	504	Open in IMG/M
3300011269\|Ga0137392_11056539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300011269\|Ga0137392_11432769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300011270\|Ga0137391_10130657	All Organisms → cellular organisms → Bacteria → Acidobacteria	2183	Open in IMG/M
3300011270\|Ga0137391_10379648	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1211	Open in IMG/M
3300011271\|Ga0137393_10363920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1236	Open in IMG/M
3300011271\|Ga0137393_11751395	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300012096\|Ga0137389_11777508	Not Available	512	Open in IMG/M
3300012199\|Ga0137383_11357559	Not Available	504	Open in IMG/M
3300012202\|Ga0137363_10278357	Not Available	1368	Open in IMG/M
3300012203\|Ga0137399_10380862	Not Available	1175	Open in IMG/M
3300012203\|Ga0137399_10588647	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	935	Open in IMG/M
3300012203\|Ga0137399_10614708	Not Available	914	Open in IMG/M
3300012203\|Ga0137399_10693039	All Organisms → cellular organisms → Bacteria	857	Open in IMG/M
3300012203\|Ga0137399_11160425	Not Available	650	Open in IMG/M
3300012206\|Ga0137380_11255164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300012210\|Ga0137378_11866042	Not Available	503	Open in IMG/M
3300012349\|Ga0137387_10550399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	837	Open in IMG/M
3300012349\|Ga0137387_11258364	Not Available	520	Open in IMG/M
3300012354\|Ga0137366_11131683	Not Available	537	Open in IMG/M
3300012357\|Ga0137384_10876272	All Organisms → cellular organisms → Bacteria	724	Open in IMG/M
3300012362\|Ga0137361_10175952	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1927	Open in IMG/M
3300012363\|Ga0137390_10554321	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1120	Open in IMG/M
3300012582\|Ga0137358_10149237	All Organisms → cellular organisms → Bacteria → Acidobacteria	1592	Open in IMG/M
3300012685\|Ga0137397_10168822	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1624	Open in IMG/M
3300012685\|Ga0137397_10497295	All Organisms → cellular organisms → Bacteria → Acidobacteria	908	Open in IMG/M
3300012917\|Ga0137395_11186976	Not Available	535	Open in IMG/M
3300012922\|Ga0137394_10131612	All Organisms → cellular organisms → Bacteria → Acidobacteria	2122	Open in IMG/M
3300012922\|Ga0137394_10186344	All Organisms → cellular organisms → Bacteria → Acidobacteria	1771	Open in IMG/M
3300012922\|Ga0137394_10436304	Not Available	1115	Open in IMG/M
3300012922\|Ga0137394_11264301	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300012923\|Ga0137359_10369805	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1274	Open in IMG/M
3300012923\|Ga0137359_10589826	Not Available	976	Open in IMG/M
3300012924\|Ga0137413_11479554	Not Available	551	Open in IMG/M
3300012925\|Ga0137419_10045520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2800	Open in IMG/M
3300012927\|Ga0137416_10277865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1379	Open in IMG/M
3300012930\|Ga0137407_10018644	All Organisms → cellular organisms → Bacteria	5151	Open in IMG/M
3300012930\|Ga0137407_10138627	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2135	Open in IMG/M
3300012957\|Ga0164303_11145260	Not Available	565	Open in IMG/M
3300013307\|Ga0157372_11854377	Not Available	693	Open in IMG/M
3300014154\|Ga0134075_10215303	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300014657\|Ga0181522_10035277	Not Available	2779	Open in IMG/M
3300015054\|Ga0137420_1238936	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300015245\|Ga0137409_10317866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1364	Open in IMG/M
3300015264\|Ga0137403_10733103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	847	Open in IMG/M
3300016294\|Ga0182041_11456219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300017656\|Ga0134112_10198263	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	784	Open in IMG/M
3300017822\|Ga0187802_10138100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	928	Open in IMG/M
3300017933\|Ga0187801_10293579	Not Available	660	Open in IMG/M
3300017936\|Ga0187821_10409666	Not Available	556	Open in IMG/M
3300017973\|Ga0187780_10005683	All Organisms → cellular organisms → Bacteria → Acidobacteria	9312	Open in IMG/M
3300018433\|Ga0066667_10714957	All Organisms → cellular organisms → Bacteria	842	Open in IMG/M
3300020199\|Ga0179592_10170003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	993	Open in IMG/M
3300020579\|Ga0210407_10555798	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	896	Open in IMG/M
3300020579\|Ga0210407_10631599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300020580\|Ga0210403_10082999	All Organisms → cellular organisms → Bacteria	2585	Open in IMG/M
3300020580\|Ga0210403_10457795	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1039	Open in IMG/M
3300020582\|Ga0210395_10667725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	778	Open in IMG/M
3300021046\|Ga0215015_10682198	Not Available	963	Open in IMG/M
3300021086\|Ga0179596_10135148	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300021088\|Ga0210404_10101057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1454	Open in IMG/M
3300021171\|Ga0210405_10321160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1222	Open in IMG/M
3300021171\|Ga0210405_11147394	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	578	Open in IMG/M
3300021178\|Ga0210408_10235607	Not Available	1457	Open in IMG/M
3300021401\|Ga0210393_10026966	All Organisms → cellular organisms → Bacteria	4482	Open in IMG/M
3300021402\|Ga0210385_11474138	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300021474\|Ga0210390_11095864	Not Available	647	Open in IMG/M
3300021559\|Ga0210409_10667004	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	910	Open in IMG/M
3300023259\|Ga0224551_1067179	Not Available	627	Open in IMG/M
3300026295\|Ga0209234_1007923	All Organisms → cellular organisms → Bacteria	4032	Open in IMG/M
3300026308\|Ga0209265_1000767	All Organisms → cellular organisms → Bacteria → Acidobacteria	9302	Open in IMG/M
3300026314\|Ga0209268_1060647	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300026333\|Ga0209158_1068270	All Organisms → cellular organisms → Bacteria	1406	Open in IMG/M
3300026355\|Ga0257149_1035419	Not Available	707	Open in IMG/M
3300026499\|Ga0257181_1103080	Not Available	505	Open in IMG/M
3300026536\|Ga0209058_1294944	Not Available	558	Open in IMG/M
3300026538\|Ga0209056_10720570	Not Available	505	Open in IMG/M
3300026540\|Ga0209376_1020614	All Organisms → cellular organisms → Bacteria → Acidobacteria	4394	Open in IMG/M
3300026542\|Ga0209805_1176522	All Organisms → cellular organisms → Bacteria	952	Open in IMG/M
3300026547\|Ga0209156_10271160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	777	Open in IMG/M
3300026551\|Ga0209648_10045582	Not Available	3778	Open in IMG/M
3300026557\|Ga0179587_10303969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1028	Open in IMG/M
3300027846\|Ga0209180_10609115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	602	Open in IMG/M
3300027846\|Ga0209180_10683450	Not Available	560	Open in IMG/M
3300027855\|Ga0209693_10173655	Not Available	1063	Open in IMG/M
3300027855\|Ga0209693_10418607	Not Available	646	Open in IMG/M
3300027862\|Ga0209701_10740096	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300027910\|Ga0209583_10794267	All Organisms → cellular organisms → Bacteria → Acidobacteria	503	Open in IMG/M
3300028806\|Ga0302221_10244607	Not Available	783	Open in IMG/M
3300029636\|Ga0222749_10129614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1212	Open in IMG/M
3300029636\|Ga0222749_10277528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300031572\|Ga0318515_10144963	All Organisms → cellular organisms → Bacteria	1264	Open in IMG/M
3300031718\|Ga0307474_11297067	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300031754\|Ga0307475_10119255	All Organisms → cellular organisms → Bacteria	2076	Open in IMG/M
3300031754\|Ga0307475_10157784	Not Available	1804	Open in IMG/M
3300031754\|Ga0307475_11535144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300031845\|Ga0318511_10367260	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300031962\|Ga0307479_10284163	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1635	Open in IMG/M
3300031962\|Ga0307479_10589790	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300031962\|Ga0307479_11089109	Not Available	765	Open in IMG/M
3300031962\|Ga0307479_11541214	Not Available	621	Open in IMG/M
3300032001\|Ga0306922_10064137	All Organisms → cellular organisms → Bacteria	3826	Open in IMG/M
3300032091\|Ga0318577_10140065	All Organisms → cellular organisms → Bacteria	1148	Open in IMG/M
3300032180\|Ga0307471_100649721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Dyella → unclassified Dyella → Dyella sp. S184	1217	Open in IMG/M
3300032180\|Ga0307471_101551147	Not Available	819	Open in IMG/M
3300032205\|Ga0307472_100497826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1050	Open in IMG/M
3300033547\|Ga0316212_1006816	All Organisms → cellular organisms → Bacteria → Acidobacteria	1654	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.10%
Host-Associated	Host-Associated	2.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.03%
Aquatic	Environmental → Aquatic	5.07%
Plants	Host-Associated → Plants	2.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.58%
Freshwater	Environmental → Aquatic → Freshwater	2.90%
Sediment	Environmental → Aquatic → Sediment	2.17%
Peat	Environmental → Terrestrial → Peat	1.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.72%
Roots	Host-Associated → Plants → Roots	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.51%
Loam	Environmental → Terrestrial → Soil → Loam	4.35%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.75%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.91%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.39%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.35%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.17%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.72%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.72%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.72%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.72%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.72%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	38.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	11.59%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.97%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	5.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.90%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.17%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.17%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.45%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.45%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.72%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.72%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.72%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.72%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.72%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.72%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.72%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300002916	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017936	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300023259	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 20-24	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026314	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143 (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026355	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-A	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026536	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033547	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12053J15887_104363212	3300001661	Forest Soil	FVIDPADKTQAELIRKLGMKVEVVPTVMKTRTQKRNLARSLLALKS*
JGIcombinedJ26739_1016453152	3300002245	Forest Soil	YADFTGTFVIDPQDGPQADAIRKLDLEVAIVPTVMKTRAQKRKLAQALLALP*
JGI25613J43889_100284901	3300002907	Grasslands Soil	IDPADKAQANGIRKLGMKVEVVPTVMTTRGQKRELARSLLALKT*
JGI25382J43887_101361791	3300002908	Grasslands Soil	KLYADFTGTVVIDPADKAQAPAISALGMKVAILPTVMKTRSQKRKLASALLSISLPRGLTG*
JGI25617J43924_100633531	3300002914	Grasslands Soil	DPADKSQASAIAALGMKVVILPTVMKTLAQKGKLAHALLSLA*
JGI25389J43894_10481252	3300002916	Grasslands Soil	GALVIDPADKSLAAAIAALGMKVVILPTVMTTHTQKRKLASALLSFPL*
Ga0066688_105170272	3300005178	Soil	IDPADQAQASTISTLGMKVVILPTVMKTCSQKRKLARNLLSL*
Ga0066388_1047454881	3300005332	Tropical Forest Soil	FVIDPADKRHAADISALGMKAAVVPTVMKTLRQKRKLAQALLHL*
Ga0068868_1016100442	3300005338	Miscanthus Rhizosphere	TTFVIDPADKSQADAIRALGMNIVVIPTVMQTRSDKRKLARALLAL*
Ga0008090_145209963	3300005363	Tropical Rainforest Soil	PADKTQAAAIGGLGMKVAILPTVMKTRAEKHRLARALLEL*
Ga0066681_104431611	3300005451	Soil	TFVIDPSDKAAATAVSTLGMKVAVLPTVMNTLTQKRKLAHALLSL*
Ga0066687_109594311	3300005454	Soil	DFTGTFVIDPADQAQASTISTLGMKVVILPTVMKTCSQKRKLARNLLSL*
Ga0066692_102960192	3300005555	Soil	DKSQSAAISALGMHVAVLPTVMKTLAQKRKLARALLSLPPALSL*
Ga0066698_109320971	3300005558	Soil	FVIDPADRVQVGAISALGMKVAILPTVMKTLSQKRKLARALLQL*
Ga0066699_104373471	3300005561	Soil	GTFVIDPADKAQAVAISALGMKVAVLPTVMKTRAQKDKLARALLNL*
Ga0066691_104330942	3300005586	Soil	YADFTGIFVIDPADKTQTVNIWKLGMRVEVIPTVMATRAHKRKLARSLLALRT*
Ga0066651_105456561	3300006031	Soil	TGTFVIDLVDRAQATAISALGMKVEILPTVMKTLAQKRKLARKLARSLLDL*
Ga0075019_107949801	3300006086	Watersheds	TFIIDPADKALASPIAALGVKVAILPTVMKTLAQKRKLARALLRL*
Ga0075018_102858782	3300006172	Watersheds	TGTFVIDPADKSQASAITALGMKVAILPTVMKTRAHKRKLARDLLSLSPLLSL*
Ga0075426_105934251	3300006903	Populus Rhizosphere	DKSQSAAICALGMRVAVLPTVMKTLAQKRKLARALLSLSPSLA*
Ga0079219_103736292	3300006954	Agricultural Soil	VISANTQLKSADFTGTFVIDPVDKKDSGVISALGIKVAIVPTVMKTLSQKRKLARALLSL
Ga0099794_104450021	3300007265	Vadose Zone Soil	FVIDPTDKKQADRIRDLGIKVEVVPTVMATRAQKRKLAGSLLALKS*
Ga0099795_105792142	3300007788	Vadose Zone Soil	IDPADKKQTISIRKLGMKVEVIPTVMTTRVQKRELAGALLALKI*
Ga0066710_1040274091	3300009012	Grasslands Soil	AYSTANFVIDTAHLSHSPAIVALGTKLAILPTEMKSRARKRKLARALLSPSYSS
Ga0099829_106362103	3300009038	Vadose Zone Soil	FAIDPADKAQASAIATLGMKVAILPTVMNTLAQKRKLARALLSLSFSL*
Ga0099829_111267792	3300009038	Vadose Zone Soil	GVAKLYADFTGTFIIDPADRKQAAPIAALGIKVAILPTVMNTRQQKRKVARSLRAL*
Ga0099828_105378182	3300009089	Vadose Zone Soil	ADFTGTFVIDPVDKSQSAAIAALGMKIAILPTVMKSRAQKRKLARTLLSPSYSL*
Ga0099792_110335272	3300009143	Vadose Zone Soil	DFTGTFVIDPVDKAQASPIAALGLKVAILPTVMKTRAQKRKLARALLSSPFPF*
Ga0099796_100375311	3300010159	Vadose Zone Soil	KLYADFTGIFVIDPADKTQTVNIRKLGMQVEVIPTVMATRAHKRKLARSLLALRT*
Ga0134063_101422363	3300010335	Grasslands Soil	FVIDPADKSQSAAISALGMKVVILPTVMKTRAQKRKLARALLSLSPSSAL*
Ga0134063_107219482	3300010335	Grasslands Soil	FVIDPVDKSQSAAISALGMKVAVLPTVMKTRAQKRELARALLS*
Ga0150983_147538162	3300011120	Forest Soil	VAKLYADFTGIYAIDPQDKSQSTAISALGLRPVVLPTVMKTLTHKRRLARALLSP*
Ga0137392_110565392	3300011269	Vadose Zone Soil	DFTGTFIIDPADKSQSAAISALGMRVAILPTVMKTPVQKRKLARAIVSL*
Ga0137392_114327692	3300011269	Vadose Zone Soil	VIDPADRAQAESIRKLGMKVEVVPTVMKTRTQKRKLARSLLALNS*
Ga0137391_101306573	3300011270	Vadose Zone Soil	DGVDKEQASPIAALGMKVAILSTVMKTRAQKRKLARALLEL*
Ga0137391_103796481	3300011270	Vadose Zone Soil	KSQAAAIAKLGMKVVTLPTVMKTRPQKRKLARALLSLSPSLPSLL*
Ga0137393_103639201	3300011271	Vadose Zone Soil	DFTGTFVIDPADRAQAESIRKLGMKVEVVPTVMKTRTQKRKLARSLLALNS*
Ga0137393_117513952	3300011271	Vadose Zone Soil	DFTGTFVIDPADRKQTAPIAALGMKVAILPTVMKTPAQKRKLARALLSPSFPL*
Ga0137389_117775081	3300012096	Vadose Zone Soil	KLYVEFTNTFVIDPEDKAQAASIAALGMKVVTLPTVMKTRPQKRKLARSLLSLSL*
Ga0137383_113575591	3300012199	Vadose Zone Soil	PADKSQSAAVSALGVKVVVLPTVMKTHAQKRKLARALLSLTL*
Ga0137363_102783571	3300012202	Vadose Zone Soil	FAIDPADKSQSAAIAALGMRVAVLPTVMKTLAQKRKLARALLSLS*
Ga0137399_103808621	3300012203	Vadose Zone Soil	DKSQAAAISALGMKVAILPTVMKTRTQKRKLARALLSSSFHF*
Ga0137399_105886471	3300012203	Vadose Zone Soil	FTGTFIIDPADKSQAAAISALGMKVAILPTVMKTRTQKRKLARALLSL*
Ga0137399_106147081	3300012203	Vadose Zone Soil	GTFIIDPADKSQAAAISALGMKVAILPTVMKTRAQKRKLARALLSL*
Ga0137399_106930392	3300012203	Vadose Zone Soil	YADFTGTFVIDPVDKSQSTAIAALGMKVAILPTVMKTRAQKRKLARALLSLFPSSTL*
Ga0137399_111604251	3300012203	Vadose Zone Soil	IDPADKSCSAAITALGMKVAILPTVMKMLAQKRKLARALLSL*
Ga0137380_112551642	3300012206	Vadose Zone Soil	DKSQSGSISALGMRVVVLHTVMKTLAQKRKLARALLSLSPL*
Ga0137378_118660422	3300012210	Vadose Zone Soil	DFTGTFVIDPADKPESAAISGLGMRVAVLPSVMKPLPQKRKLASALLSFPL*
Ga0137387_105503991	3300012349	Vadose Zone Soil	ADFTGTFIIDPADKSQSAAISTLGMKVVILPTVMKTLAQKRKLARAILTL*
Ga0137387_112583642	3300012349	Vadose Zone Soil	DPADRSQVGAVSALGMKVAILPTVMKTLSQKRKLARALLQL*
Ga0137366_111316831	3300012354	Vadose Zone Soil	TGTFVIDPADRVQVGAISALGMKVAILPTVMKTLSQKRKLARALVQL*
Ga0137384_108762722	3300012357	Vadose Zone Soil	ADFTSIFVIDPVDKSQSAAISALGMKVVILPTVMKTRAQKRKLARALLSLSPSSPL*
Ga0137361_101759521	3300012362	Vadose Zone Soil	VIDPADKMQAEPIRKLGMKVEVVPTVMKTQTQKRKLARSLLALKS*
Ga0137390_105543211	3300012363	Vadose Zone Soil	KLYADFTGTFIIDPADRTQAAPIAALGLEFAILPTVMKTQAQKRKLASAILNL*
Ga0137358_101492372	3300012582	Vadose Zone Soil	LVIDPADKNQTISIRKLRMKVEVIPTVMTTRAQKRELARALLALKI*
Ga0137397_101688221	3300012685	Vadose Zone Soil	FTGTFIIDTADKSQSAAISALSMKVIILPTVMKTRAQKRKLARALLSLSL*
Ga0137397_104972951	3300012685	Vadose Zone Soil	FIIDTADKSQSAAISALSMKVIILPTVMKTRAQKRKLARALLSLSF*
Ga0137395_111869761	3300012917	Vadose Zone Soil	IDPADKSQSAAISALGMQVGVLHTIMKTRAHKRKLARALLSLSL*
Ga0137394_101316121	3300012922	Vadose Zone Soil	GTFVIDPADKAQTASIRELGLKVEVIPTVMTTRAQKRKLARSLLGLTM*
Ga0137394_101863444	3300012922	Vadose Zone Soil	YADFTGTFIIDTADKSQSAAISALSMKVIILPTVMKTRAQKRKLARALLSLSF*
Ga0137394_104363043	3300012922	Vadose Zone Soil	DPADRKQSAPISALGMKVTVLPTVMKTRTQKRRLARALLPSSF*
Ga0137394_112643011	3300012922	Vadose Zone Soil	IDPVDKSQSVAISALGMKVVVLPTVMKTVPQKRKLARALLSLS*
Ga0137359_103698051	3300012923	Vadose Zone Soil	FVIDPADKTRVGAIRKLGMKVEVVPTVMKTRTQKRKLARSLLALNS*
Ga0137359_105898261	3300012923	Vadose Zone Soil	PADKSQAAAISALGMKVAILPTVMKTRAQKRKLARALLSL*
Ga0137413_114795542	3300012924	Vadose Zone Soil	ARLYADFTGTFIIDPADRKQAAPIARMGMHVVILPTVMKTRTQKRKLARALLGL*
Ga0137419_100455204	3300012925	Vadose Zone Soil	ADKSQSDAISALGMKVAVLPTVMKTRAQKRKLARAFFSL*
Ga0137416_102778653	3300012927	Vadose Zone Soil	FVIDPADNAQTASIRELGLKVEVIPTVMTTRAQKRKLARSLLGLTM*
Ga0137407_100186446	3300012930	Vadose Zone Soil	SQSAPISALGLQPVVLPTIMKTLTQKRRLARNLLSL*
Ga0137407_101386271	3300012930	Vadose Zone Soil	TGTFIIDPADKSQAAAISALGMKVAILPTVMKTRAQKRKLARALLSL*
Ga0164303_111452601	3300012957	Soil	ADFTTTFVIDPADKSQADAIRALGMNIVVIPTVMQTRSDKRKLARALLAL*
Ga0157372_118543772	3300013307	Corn Rhizosphere	TFVIDPADKSQADAIRALGMNIVVIPTVRQTRSDKRKLARALLAL*
Ga0134075_102153032	3300014154	Grasslands Soil	YADFTATFVIDPADKSQSSAISALGMRVVVLPTVMKTLGQKRNLARTLLSVSTSLPSLL*
Ga0181522_100352774	3300014657	Bog	AKGVAKLHADFTGTFVIDPADQSQRVAIESLGMKVAVIPTVMQTRGDKRKLARAIFSL*
Ga0137420_12389361	3300015054	Vadose Zone Soil	FVIDPADRKQAAPIAALGMKVAILPTVMKTPAQKRKLASALLSLSFPL*
Ga0137409_103178661	3300015245	Vadose Zone Soil	DFTGTFVIDPADKSQSAAISAFSMKVAILPTVMKTRAQKRKLARALLNL*
Ga0137403_107331031	3300015264	Vadose Zone Soil	DPADKSQAAAISALGMKVAILPTIMKTRTQKRKLARALLS*
Ga0182041_114562192	3300016294	Soil	YADFTSTFVIDPADKTQAAAIGRLGMKVAILPTVMKTRAEKHRLARALLEL
Ga0134112_101982631	3300017656	Grasslands Soil	VIDPADKSQSAAISALGMQVAVLPTVMKTLAHKRKLARDLLSLPPALPL
Ga0187802_101381001	3300017822	Freshwater Sediment	IDPADKLQTQSIAALGMKVAVLPTVMKTLAQKRKLAQALLRL
Ga0187801_102935791	3300017933	Freshwater Sediment	DFSGTFVIDPADNEQAKSIAALGMKVAVLPTVMKTLAQKRKLAQALLRL
Ga0187821_104096662	3300017936	Freshwater Sediment	DFTGTFVIDRRDGSQESAIRALGMKVAILPTVMRTRAQKRKLARALLAL
Ga0187780_100056839	3300017973	Tropical Peatland	PADSAQSAAIAKLGMKVAVVPTVMKTLTQKRKLARALLQL
Ga0066667_107149573	3300018433	Grasslands Soil	SDKAAATAVSTLGMKVAVLPTVMNTLTQKRKLAHALLSL
Ga0179592_101700032	3300020199	Vadose Zone Soil	PADKAQTAGIRKLGLKVEVIPTVMTTRAQKRELARALLALKI
Ga0210407_105557982	3300020579	Soil	TFVIDPADKSQAAAISALGMKVAILPTVMKTLAQKRKLGRALLSLSV
Ga0210407_106315992	3300020579	Soil	DFTGTFVIDPVDKMQARSIRKLGMQVEVVPTVMKTRTQKRRLARSLLALNA
Ga0210403_100829995	3300020580	Soil	KLYAPFTATFIIDPADKAQASAITALDMKVAVFPTVMKTLAQKRKLARALLSSSFPV
Ga0210403_104577952	3300020580	Soil	LYADFTGTFVIDRRDSSQEAAIRGLGMKVAILPTVMRTRAQKRKLARALLTYS
Ga0210395_106677252	3300020582	Soil	VIDSADKSQAEKIRALGMRVAVLPTVMKTLAQKRKLARALLKLARS
Ga0215015_106821982	3300021046	Soil	VIDPQDESQQGAIRDLGMDVAVLPTVMKTGAQKRNLARAILKLARK
Ga0179596_101351483	3300021086	Vadose Zone Soil	VDKSQSAAIAALGMKIAILPTVMKSRAQKRKLARTLLSPSYSL
Ga0210404_101010571	3300021088	Soil	DFTATFVIDSADKAQAPAIAALGMKVAILPTVMQTISQKRKLARSLLS
Ga0210405_103211601	3300021171	Soil	FVIDPADKKQTESIRKSGMKVEVLPTVMKTRAQKRKLARSLLALEM
Ga0210405_111473942	3300021171	Soil	LYADFTGTFVIDPADKPQAGSIRKLGMEVEVVPTVMKTRTQKRTLARSLLALRS
Ga0210408_102356071	3300021178	Soil	YAIDPQDKSQSSAISALGLQPVVLPTVMKTLTQKRRLARALLSL
Ga0210393_100269666	3300021401	Soil	LYADFTGTFVIDRRDASQESAIRALGMKVAILPTVMRTRSQKRKLARALLSL
Ga0210385_114741381	3300021402	Soil	PADKSQSTAIAALGMRVAVLPTVMKTLAQKRKLARALLLPAEK
Ga0210390_110958642	3300021474	Soil	YAPFTATFIIDPADKAQASAITALDMKVAVFPTVMKTLAQKRKLARALLSSSFPV
Ga0210409_106670041	3300021559	Soil	FVIDRRDASQEHAIRALGMKVAILPTVMRTRSDKRKLARALLAL
Ga0224551_10671792	3300023259	Soil	PTDQSQASSIEALNMKVKVIPTIMKTRTDKRKLARALLAL
Ga0209234_10079231	3300026295	Grasslands Soil	TFMIDSVDKSQSVAIAALGMNIAILPTVMKSRAQKRKLARALLSPSYSL
Ga0209265_10007679	3300026308	Soil	ADKAQAVAISALGMKVAVLPTVMKTRAQKDKLARALLNL
Ga0209268_10606471	3300026314	Soil	KLYAGFTGTFVIDLVDRAQATALSALGMKVEILPTVMKTLAQKRKLARSLLDL
Ga0209158_10682701	3300026333	Soil	TGTFIIDPADKSQSAAISALGMQVAVLHTIMKTRAHKRKLARALLSLSL
Ga0257149_10354192	3300026355	Soil	PADKSHSAAISGLGMQVAVISTVMNTRARKRKLARALLSISS
Ga0257181_11030802	3300026499	Soil	TGIFVLDPADKTQAETIRELGMKVEVVPTVMKTRAQKTKLARALLALKA
Ga0209058_12949441	3300026536	Soil	FVIDPADRVQVGAISALGMKVAILPTVMKTLSQKRKLARALLQL
Ga0209056_107205702	3300026538	Soil	DFMGTFVIDPVDKSQSAAISALGMKVAVLPTIMKTLAQKRKLARALLSL
Ga0209376_10206141	3300026540	Soil	PADKAQASTIAALGMKVVILPTVMKTRPHKRKLARCLLSL
Ga0209805_11765223	3300026542	Soil	TGTFVIDPADKAQAVAISALGMKVAVLPTVMKTRAQKDKLARALLNL
Ga0209156_102711602	3300026547	Soil	LYADFTGTFVIDPADKSQSAAISALGMQVAVLPTVMKTLAHKRKLARDLLSLPPALPL
Ga0209648_100455821	3300026551	Grasslands Soil	ADKSQASAIAALGIKVVILPTVMKTRTQKRNLARALLSISL
Ga0179587_103039691	3300026557	Vadose Zone Soil	YADFTGTFVIDPADKAQTAGIRKLGLKVEVIPTVMTTRAQKRELARALLALKI
Ga0209180_106091151	3300027846	Vadose Zone Soil	FAIDPADKAQASAIATLGMKVAILPTVMNTLAQKRKLARALLSLSFSL
Ga0209180_106834501	3300027846	Vadose Zone Soil	FTGTFIIDPLDKAQNEVISSLGMKVEVVPTVMKTRTQKRKLARALLNL
Ga0209693_101736552	3300027855	Soil	YADLTGTFVIDPTDESQRSAIESLGMKVAVIPTVMNTRGDKRKLARAILSLRKDSEGSVAKSG
Ga0209693_104186072	3300027855	Soil	IDRADKSQAAAISALGMKVAILPTVMKTRGQKRKLARSVLSL
Ga0209701_107400962	3300027862	Vadose Zone Soil	VIDPVDKYQSAEIAALGMKIAILPTVMKSRAQKRKLARTLLSPSYSL
Ga0209583_107942671	3300027910	Watersheds	YADFTGTFVVDPADRGQDASIRSLGMNVAVMPTVMRTLAQKRKLALSLLTL
Ga0302221_102446072	3300028806	Palsa	IDSEDALQARAIRDLGMRVAILPTVMKTRAQKRKLAAALLKL
Ga0222749_101296141	3300029636	Soil	GTFVIDPADKTQAPAITALGMKVAILPTVMKTLPQKRKLARALIYLT
Ga0222749_102775281	3300029636	Soil	ADFTGTFVIDRRDASQESAIRALGMKVAILPTVMRTRSQKRKLARALLSL
Ga0318515_101449631	3300031572	Soil	PADQAHSAAVSTLGMKVAVLPTVMKTRAQKDTLARALLKL
Ga0307474_112970671	3300031718	Hardwood Forest Soil	VIDPADKSQSTAISALGMKVAVLPTVMKTLAQKRKLARSLLSFPL
Ga0307475_101192551	3300031754	Hardwood Forest Soil	TLVIDRTDKAQAPRIAALGMKVAVLPTVMKSRAQKHRLARALLEL
Ga0307475_101577843	3300031754	Hardwood Forest Soil	AELYANFTGTFVIDTQDTAQRERIQSLGMQVAVMSTVMKTRAQKRKLARALLNLQQTP
Ga0307475_115351442	3300031754	Hardwood Forest Soil	KLCPDFTGTFIIDPADKALAGPIAALGMKVAILPTVMKTRSQKRKLAGALLQSL
Ga0318511_103672601	3300031845	Soil	IDPADQAHSAAVSTLGMKVAVLPTVMKTRAQKDTLARALLKL
Ga0307479_102841631	3300031962	Hardwood Forest Soil	LYADFTGTFVIDPADKSQSAAISALGMKVVILPTVMKTRAQKRKLAHALLS
Ga0307479_105897901	3300031962	Hardwood Forest Soil	LYADFTGTFVIDPADKSQSAAISALGMKVVILPTVMKTRAQKRKLARSVLS
Ga0307479_110891091	3300031962	Hardwood Forest Soil	VIDPADKSQADAIRILGMQVAVIPTVMKTRAQKRKLARALLEL
Ga0307479_115412141	3300031962	Hardwood Forest Soil	DFTATFIIDPADKPQAPTIAALGMKVVILPTVMKTFAQKRKLARALASL
Ga0306922_100641376	3300032001	Soil	ADFTSTFVIDPADKTQAAAIGRLGMKVAILPTVMKTRAEKHRLARALLEL
Ga0318577_101400651	3300032091	Soil	TGTFIIDPADQAHSAAVSTLGMKVAVLPTVMKTRAQKDTLARALLKL
Ga0307471_1006497213	3300032180	Hardwood Forest Soil	AKLYADFTGTFIIDPADKSQSTGISALGMKVAILPTVMKTRAQKRKLARALVAR
Ga0307471_1015511472	3300032180	Hardwood Forest Soil	ADFAGTFVIDKVDAPQAPAIRSLGLEVAILPTIMKTLAQKRRLARALLSL
Ga0307472_1004978262	3300032205	Hardwood Forest Soil	ADKSQSAAISALGMKVVVLPTVMKTLAHKRKLARALMSLSLLL
Ga0316212_10068161	3300033547	Roots	FTGTFVIDRRDASQESAIRALGMKVAVLPTVMKTRADKRKLARAILAL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056025

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences