Metagenome Family F056155

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056155
Family Type	Metagenome
Number of Sequences	138
Average Sequence Length	47 residues
Representative Sequence	MRMAGQALKPMVNTGEGCATKPETYPAKPKGGMSHGPQLLGQKYV
Number of Associated Samples	67
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.88 %
% of genes near scaffold ends (potentially truncated)	15.22 %
% of genes from short scaffolds (< 2000 bps)	73.91 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.174 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (40.580 % of family members)
Environment Ontology (ENVO)	Unclassified (86.232 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (91.304 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.59% β-sheet: 0.00% Coil/Unstructured: 90.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.18
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.18
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00959	Phage_lysozyme	5.11
PF13884	Peptidase_S74	4.38
PF00504	Chloroa_b-bind	3.65
PF12385	Peptidase_C70	2.92
PF00589	Phage_integrase	2.19
PF13529	Peptidase_C39_2	1.46
PF16778	Phage_tail_APC	1.46
PF08291	Peptidase_M15_3	0.73
PF01391	Collagen	0.73
PF12708	Pectate_lyase_3	0.73
PF12836	HHH_3	0.73
PF09367	CpeS	0.73
PF01844	HNH	0.73
PF00383	dCMP_cyt_deam_1	0.73
PF01176	eIF-1a	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0361	Translation initiation factor IF-1	Translation, ribosomal structure and biogenesis [J]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	69.57 %
Unclassified	root	N/A	30.43 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.17 %
Unclassified	root	N/A	30.43 %
Viruses	superkingdom	All Organisms → Viruses	17.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.17 %
Unclassified	root	N/A	30.43 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	5.80 %
unclassified viruses	clade	All Organisms → Viruses → unclassified viruses	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.43 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	11.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	7.97 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	5.80 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.17 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.90 %
unclassified DNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.43 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	11.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	7.97 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	5.80 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	2.17 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.90 %
unclassified dsDNA viruses	no rank	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.43 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	11.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Phycisphaerae	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae	7.97 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	5.80 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	2.17 %
Rickettsiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales	2.17 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.43 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	11.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
unclassified Phycisphaerae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae	7.97 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	5.07 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	2.17 %
unclassified Rickettsiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales	2.17 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.72 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.43 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	11.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	7.97 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	5.07 %
Synechococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae	2.17 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2.17 %
unclassified Rhodospirillaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae	0.72 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.43 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	11.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	7.97 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	5.07 %
Synechococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus	2.17 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2.17 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.72 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.43 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	11.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	7.97 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	5.07 %
unclassified Synechococcus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus	2.17 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2.17 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.72 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.72 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	30.43 %
bacterium TMED88	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	11.59 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.42 %
Phycisphaerae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	7.97 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	5.07 %
Synechococcus sp. ROS8604	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. ROS8604	2.17 %
Rickettsiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	2.17 %
Rhodospirillaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	0.72 %
Prokaryotic dsDNA virus sp.	species	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10050804	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. ROS8604	1816	Open in IMG/M
3300001450\|JGI24006J15134_10006665	All Organisms → cellular organisms → Bacteria	5917	Open in IMG/M
3300001450\|JGI24006J15134_10038492	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300001450\|JGI24006J15134_10059366	All Organisms → Viruses → Predicted Viral	1520	Open in IMG/M
3300001450\|JGI24006J15134_10059636	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300001450\|JGI24006J15134_10063825	Not Available	1444	Open in IMG/M
3300001450\|JGI24006J15134_10068054	Not Available	1377	Open in IMG/M
3300001450\|JGI24006J15134_10073118	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300001450\|JGI24006J15134_10086811	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1155	Open in IMG/M
3300001450\|JGI24006J15134_10091958	All Organisms → Viruses → Predicted Viral	1108	Open in IMG/M
3300001450\|JGI24006J15134_10093852	All Organisms → Viruses → Predicted Viral	1092	Open in IMG/M
3300001450\|JGI24006J15134_10095195	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	1080	Open in IMG/M
3300001450\|JGI24006J15134_10122253	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	896	Open in IMG/M
3300001450\|JGI24006J15134_10161320	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	723	Open in IMG/M
3300001450\|JGI24006J15134_10188589	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	639	Open in IMG/M
3300001450\|JGI24006J15134_10188772	Not Available	639	Open in IMG/M
3300001450\|JGI24006J15134_10202310	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	604	Open in IMG/M
3300001460\|JGI24003J15210_10003448	All Organisms → cellular organisms → Bacteria	6879	Open in IMG/M
3300001460\|JGI24003J15210_10003660	All Organisms → cellular organisms → Bacteria	6651	Open in IMG/M
3300001460\|JGI24003J15210_10150762	Not Available	595	Open in IMG/M
3300001720\|JGI24513J20088_1006953	Not Available	1512	Open in IMG/M
3300001720\|JGI24513J20088_1009986	Not Available	1184	Open in IMG/M
3300001940\|GOS2222_1013867	All Organisms → cellular organisms → Bacteria	1818	Open in IMG/M
3300002231\|KVRMV2_100028762	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1420	Open in IMG/M
3300002231\|KVRMV2_100410094	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300003580\|JGI26260J51721_1059952	Not Available	575	Open in IMG/M
3300004097\|Ga0055584_101683681	Not Available	655	Open in IMG/M
3300004448\|Ga0065861_1037809	All Organisms → cellular organisms → Bacteria	4379	Open in IMG/M
3300004460\|Ga0066222_1099715	All Organisms → Viruses → Predicted Viral	1445	Open in IMG/M
3300004461\|Ga0066223_1102231	Not Available	2009	Open in IMG/M
3300006921\|Ga0098060_1004605	All Organisms → cellular organisms → Bacteria	4854	Open in IMG/M
3300006921\|Ga0098060_1018323	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2197	Open in IMG/M
3300006921\|Ga0098060_1021323	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	2011	Open in IMG/M
3300006921\|Ga0098060_1023934	Not Available	1884	Open in IMG/M
3300006921\|Ga0098060_1047514	Not Available	1274	Open in IMG/M
3300007864\|Ga0105749_1137271	Not Available	566	Open in IMG/M
3300007954\|Ga0105739_1131582	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	586	Open in IMG/M
3300007956\|Ga0105741_1015556	All Organisms → Viruses → Predicted Viral	1930	Open in IMG/M
3300007956\|Ga0105741_1143302	Not Available	586	Open in IMG/M
3300007992\|Ga0105748_10203489	Not Available	823	Open in IMG/M
3300007992\|Ga0105748_10338337	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	643	Open in IMG/M
3300009079\|Ga0102814_10146145	Not Available	1293	Open in IMG/M
3300009080\|Ga0102815_10024752	All Organisms → cellular organisms → Bacteria	3325	Open in IMG/M
3300009593\|Ga0115011_10503020	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300009593\|Ga0115011_11044510	Not Available	694	Open in IMG/M
3300017706\|Ga0181377_1015008	Not Available	1776	Open in IMG/M
3300017713\|Ga0181391_1084051	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300017714\|Ga0181412_1000704	Not Available	13694	Open in IMG/M
3300017714\|Ga0181412_1064424	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	904	Open in IMG/M
3300017719\|Ga0181390_1053461	Not Available	1178	Open in IMG/M
3300017725\|Ga0181398_1000459	All Organisms → cellular organisms → Bacteria	12137	Open in IMG/M
3300017725\|Ga0181398_1002348	All Organisms → cellular organisms → Bacteria	5291	Open in IMG/M
3300017725\|Ga0181398_1014215	All Organisms → cellular organisms → Bacteria	2009	Open in IMG/M
3300017725\|Ga0181398_1162503	Not Available	528	Open in IMG/M
3300017726\|Ga0181381_1013206	All Organisms → cellular organisms → Bacteria	1919	Open in IMG/M
3300017728\|Ga0181419_1000209	Not Available	20003	Open in IMG/M
3300017728\|Ga0181419_1060916	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300017730\|Ga0181417_1053112	Not Available	990	Open in IMG/M
3300017730\|Ga0181417_1077628	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	805	Open in IMG/M
3300017730\|Ga0181417_1077628	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	805	Open in IMG/M
3300017735\|Ga0181431_1022893	Not Available	1451	Open in IMG/M
3300017738\|Ga0181428_1006749	All Organisms → cellular organisms → Bacteria	2614	Open in IMG/M
3300017740\|Ga0181418_1105684	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	682	Open in IMG/M
3300017742\|Ga0181399_1038361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. ROS8604	1279	Open in IMG/M
3300017752\|Ga0181400_1187134	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	575	Open in IMG/M
3300017756\|Ga0181382_1024792	Not Available	1856	Open in IMG/M
3300017756\|Ga0181382_1048628	All Organisms → cellular organisms → Bacteria	1229	Open in IMG/M
3300017756\|Ga0181382_1143105	Not Available	627	Open in IMG/M
3300017757\|Ga0181420_1051505	All Organisms → Viruses → Predicted Viral	1319	Open in IMG/M
3300017757\|Ga0181420_1120543	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300017757\|Ga0181420_1204754	Not Available	572	Open in IMG/M
3300017757\|Ga0181420_1208620	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	565	Open in IMG/M
3300017762\|Ga0181422_1027586	All Organisms → Viruses → Predicted Viral	1856	Open in IMG/M
3300017762\|Ga0181422_1112648	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	846	Open in IMG/M
3300017762\|Ga0181422_1242729	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	534	Open in IMG/M
3300017763\|Ga0181410_1074657	Not Available	1007	Open in IMG/M
3300017764\|Ga0181385_1110107	Not Available	842	Open in IMG/M
3300017772\|Ga0181430_1124894	Not Available	756	Open in IMG/M
3300017776\|Ga0181394_1058273	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	1285	Open in IMG/M
3300017783\|Ga0181379_1258269	Not Available	599	Open in IMG/M
3300017783\|Ga0181379_1300819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → unclassified Rhodospirillaceae → Rhodospirillaceae bacterium	545	Open in IMG/M
3300020264\|Ga0211526_1016204	Not Available	1224	Open in IMG/M
3300020365\|Ga0211506_1000730	All Organisms → cellular organisms → Bacteria	12553	Open in IMG/M
3300020380\|Ga0211498_10020419	All Organisms → Viruses	2433	Open in IMG/M
3300020418\|Ga0211557_10083952	All Organisms → Viruses	1597	Open in IMG/M
3300020432\|Ga0211556_10010476	Not Available	5150	Open in IMG/M
3300020451\|Ga0211473_10194896	All Organisms → Viruses → Predicted Viral	1043	Open in IMG/M
3300020451\|Ga0211473_10477552	Not Available	636	Open in IMG/M
3300020451\|Ga0211473_10487789	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	628	Open in IMG/M
3300020451\|Ga0211473_10560813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Synechococcaceae → Synechococcus → unclassified Synechococcus → Synechococcus sp. ROS8604	580	Open in IMG/M
3300020452\|Ga0211545_10448097	Not Available	585	Open in IMG/M
3300020453\|Ga0211550_10086863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1481	Open in IMG/M
3300020454\|Ga0211548_10141407	All Organisms → cellular organisms → Bacteria	1159	Open in IMG/M
3300020462\|Ga0211546_10051976	All Organisms → cellular organisms → Bacteria	2002	Open in IMG/M
3300022074\|Ga0224906_1042735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rickettsiales → unclassified Rickettsiales → Rickettsiales bacterium	1488	Open in IMG/M
3300022074\|Ga0224906_1122996	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300022074\|Ga0224906_1140682	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	686	Open in IMG/M
(restricted) 3300023210\|Ga0233412_10173876	Not Available	928	Open in IMG/M
(restricted) 3300024059\|Ga0255040_10333758	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	637	Open in IMG/M
(restricted) 3300024255\|Ga0233438_10052153	All Organisms → cellular organisms → Bacteria	2074	Open in IMG/M
3300025071\|Ga0207896_1010023	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1701	Open in IMG/M
3300025071\|Ga0207896_1024525	All Organisms → Viruses → unclassified viruses → unclassified DNA viruses → unclassified dsDNA viruses → Prokaryotic dsDNA virus sp.	1038	Open in IMG/M
3300025071\|Ga0207896_1076638	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	514	Open in IMG/M
3300025099\|Ga0208669_1003596	All Organisms → cellular organisms → Bacteria	5051	Open in IMG/M
3300025099\|Ga0208669_1008317	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	3000	Open in IMG/M
3300025099\|Ga0208669_1027263	Not Available	1417	Open in IMG/M
3300025120\|Ga0209535_1000436	All Organisms → cellular organisms → Bacteria	29167	Open in IMG/M
3300025120\|Ga0209535_1017095	Not Available	3789	Open in IMG/M
3300025120\|Ga0209535_1022359	All Organisms → cellular organisms → Bacteria	3169	Open in IMG/M
3300025120\|Ga0209535_1036482	All Organisms → cellular organisms → Bacteria	2251	Open in IMG/M
3300025138\|Ga0209634_1119916	All Organisms → Viruses → Predicted Viral	1124	Open in IMG/M
3300025141\|Ga0209756_1165166	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	877	Open in IMG/M
3300025168\|Ga0209337_1016979	All Organisms → cellular organisms → Bacteria	4358	Open in IMG/M
3300025168\|Ga0209337_1023393	All Organisms → cellular organisms → Bacteria	3550	Open in IMG/M
3300025168\|Ga0209337_1024314	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	3464	Open in IMG/M
3300025168\|Ga0209337_1043086	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2398	Open in IMG/M
3300025168\|Ga0209337_1061545	All Organisms → Viruses → Predicted Viral	1892	Open in IMG/M
3300025168\|Ga0209337_1069576	All Organisms → cellular organisms → Bacteria	1746	Open in IMG/M
3300025168\|Ga0209337_1115592	All Organisms → Viruses → Predicted Viral	1220	Open in IMG/M
3300025168\|Ga0209337_1117538	All Organisms → Viruses → Predicted Viral	1206	Open in IMG/M
3300025168\|Ga0209337_1122221	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300025168\|Ga0209337_1143392	All Organisms → Viruses → Predicted Viral	1045	Open in IMG/M
3300025168\|Ga0209337_1154346	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	989	Open in IMG/M
3300025168\|Ga0209337_1191543	Not Available	841	Open in IMG/M
3300025168\|Ga0209337_1288140	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	603	Open in IMG/M
3300025168\|Ga0209337_1344184	Not Available	514	Open in IMG/M
3300028197\|Ga0257110_1010870	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	4093	Open in IMG/M
3300029318\|Ga0185543_1001194	All Organisms → cellular organisms → Bacteria	7597	Open in IMG/M
3300029318\|Ga0185543_1001224	All Organisms → cellular organisms → Bacteria	7514	Open in IMG/M
3300029448\|Ga0183755_1004508	All Organisms → cellular organisms → Bacteria	6664	Open in IMG/M
3300029448\|Ga0183755_1027320	Not Available	1747	Open in IMG/M
3300031621\|Ga0302114_10413341	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	502	Open in IMG/M
3300031766\|Ga0315322_10177865	Not Available	1502	Open in IMG/M
3300031851\|Ga0315320_10025314	All Organisms → cellular organisms → Bacteria	4707	Open in IMG/M
3300031851\|Ga0315320_10573507	Not Available	746	Open in IMG/M
3300032073\|Ga0315315_10217373	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	1783	Open in IMG/M
3300032073\|Ga0315315_10927810	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium TMED88	785	Open in IMG/M
3300032073\|Ga0315315_11408222	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Phycisphaerae → unclassified Phycisphaerae → Phycisphaerae bacterium	608	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	41.30%
Strait	Environmental → Aquatic → Marine → Strait	28.26%
Unclassified	Environmental → Aquatic → Marine → Unclassified	12.32%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	7.25%
Coastal	Environmental → Aquatic → Marine → Coastal	6.52%
Inlet	Environmental → Aquatic → Marine → Inlet	1.45%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.45%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	1.45%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	41.30%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	28.26%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	12.32%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	6.52%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	5.80%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	1.45%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	1.45%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.45%
Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment	1.45%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	40.58%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	28.26%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	12.32%
Estuary Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water	4.35%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	4.35%
Marine	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine	2.17%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	1.45%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.45%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	1.45%
Marine Sediment	Environmental → Aquatic → Marine → Hydrothermal Vents → Sediment → Marine Sediment	1.45%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.72%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.72%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001450	Marine viral communities from the Pacific Ocean - LP-53	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001720	Marine viral communities from the Pacific Ocean - LP-36	Environmental	Open in IMG/M
3300001940	Marine microbial communities from Bay of Fundy, Nova Scotia, Canada - GS006	Environmental	Open in IMG/M
3300002231	Marine sediment microbial communities from Santorini caldera mats, Greece - red mat	Environmental	Open in IMG/M
3300003580	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - Saanich Inlet SI074_LV_120m_DNA	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300004448	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004460	Marine viral communities from Newfoundland, Canada BC-1	Environmental	Open in IMG/M
3300004461	Marine viral communities from Newfoundland, Canada BC-2	Environmental	Open in IMG/M
3300006921	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG	Environmental	Open in IMG/M
3300007864	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461B_3.0um	Environmental	Open in IMG/M
3300007954	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1373B_0.2um	Environmental	Open in IMG/M
3300007956	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1459A_0.2um	Environmental	Open in IMG/M
3300007992	Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1461AB_0.2um	Environmental	Open in IMG/M
3300009079	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.741	Environmental	Open in IMG/M
3300009080	Estuarine microbial communities from the Columbia River estuary - Ebb tide ETM metaG S.759	Environmental	Open in IMG/M
3300009593	Marine eukaryotic phytoplankton communities from Atlantic Ocean - Tropical Atlantic ANT8 Metagenome	Environmental	Open in IMG/M
3300017706	Marine viral communities from the Subarctic Pacific Ocean - Lowphox_13 viral metaG	Environmental	Open in IMG/M
3300017713	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 14 SPOT_SRF_2010-08-11	Environmental	Open in IMG/M
3300017714	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 35 SPOT_SRF_2012-08-15	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017725	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 21 SPOT_SRF_2011-04-29	Environmental	Open in IMG/M
3300017726	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24	Environmental	Open in IMG/M
3300017728	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 42 SPOT_SRF_2013-04-24	Environmental	Open in IMG/M
3300017730	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 40 SPOT_SRF_2013-02-13	Environmental	Open in IMG/M
3300017735	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 54 SPOT_SRF_2014-05-21	Environmental	Open in IMG/M
3300017738	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 51 SPOT_SRF_2014-02-12	Environmental	Open in IMG/M
3300017740	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 41 SPOT_SRF_2013-03-13	Environmental	Open in IMG/M
3300017742	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 22 SPOT_SRF_2011-05-21	Environmental	Open in IMG/M
3300017752	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 23 SPOT_SRF_2011-06-22	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017757	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 43 SPOT_SRF_2013-05-22	Environmental	Open in IMG/M
3300017762	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 45 SPOT_SRF_2013-07-18	Environmental	Open in IMG/M
3300017763	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 33 SPOT_SRF_2012-06-20	Environmental	Open in IMG/M
3300017764	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 8 SPOT_SRF_2010-02-11	Environmental	Open in IMG/M
3300017772	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 53 SPOT_SRF_2014-04-10	Environmental	Open in IMG/M
3300017776	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 17 SPOT_SRF_2010-11-23	Environmental	Open in IMG/M
3300017783	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 2 SPOT_SRF_2009-07-10	Environmental	Open in IMG/M
3300020264	Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556116-ERR599158)	Environmental	Open in IMG/M
3300020365	Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX555943-ERR599143)	Environmental	Open in IMG/M
3300020380	Marine microbial communities from Tara Oceans - TARA_B000000565 (ERX555945-ERR599058)	Environmental	Open in IMG/M
3300020418	Marine microbial communities from Tara Oceans - TARA_B100002051 (ERX556028-ERR599136)	Environmental	Open in IMG/M
3300020432	Marine microbial communities from Tara Oceans - TARA_B100002052 (ERX556103-ERR599100)	Environmental	Open in IMG/M
3300020451	Marine microbial communities from Tara Oceans - TARA_B100001778 (ERX555927-ERR598996)	Environmental	Open in IMG/M
3300020452	Marine microbial communities from Tara Oceans - TARA_B100001173 (ERX556054-ERR599078)	Environmental	Open in IMG/M
3300020453	Marine microbial communities from Tara Oceans - TARA_B100001758 (ERX556003-ERR598963)	Environmental	Open in IMG/M
3300020454	Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)	Environmental	Open in IMG/M
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300023210 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Na_anoxic_4_MG	Environmental	Open in IMG/M
3300024059 (restricted)	Seawater microbial communities from Strait of Georgia, British Columbia, Canada - BC1_12_2	Environmental	Open in IMG/M
3300024255 (restricted)	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - SI_123_September2016_10_MG	Environmental	Open in IMG/M
3300025071	Marine viral communities from the Pacific Ocean - LP-36 (SPAdes)	Environmental	Open in IMG/M
3300025099	Marine viral communities from the Subarctic Pacific Ocean - 21_ETSP_OMZ_AT15319 metaG (SPAdes)	Environmental	Open in IMG/M
3300025120	Marine viral communities from the Pacific Ocean - LP-28 (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025168	Marine viral communities from the Pacific Ocean - LP-53 (SPAdes)	Environmental	Open in IMG/M
3300028197	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2015_P26_10m	Environmental	Open in IMG/M
3300029318	Marine giant viral communities collected during Tara Oceans survey from station TARA_038 - TARA_Y100000289	Environmental	Open in IMG/M
3300029448	Marine viral communities collected during Tara Oceans survey from station TARA_023 - TARA_E500000082	Environmental	Open in IMG/M
3300031621	Marine microbial communities from Western Arctic Ocean, Canada - AG5_Surface	Environmental	Open in IMG/M
3300031766	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 21515	Environmental	Open in IMG/M
3300031851	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 21515	Environmental	Open in IMG/M
3300032073	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 40m 3416	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_100508046	3300000116	Marine	MRMAGQALKPKVNSGKGCTTKPEKYPAKPKGGSSHGPKLLGQNYG*
JGI24006J15134_100066655	3300001450	Marine	MRMAGQALKPMVNTGEGCATKPETYPAKPKGGISHGPQLLGQKYV*
JGI24006J15134_100384922	3300001450	Marine	MDNDFPTRMAGQALRPYVNPGEGCAKKPDRYPAKPKGGMSHGPKLLQSYV*
JGI24006J15134_100593663	3300001450	Marine	MRMAGQALEPMVNSGKGCATKPETYPAKPKGGMSHGPPLLGQKYV*
JGI24006J15134_100596365	3300001450	Marine	MRMAGQALKPAVNTGKGCATKPETYPAKPHGGSSHGPQLLGQKYV*
JGI24006J15134_100638256	3300001450	Marine	MRMAGQFLKPHVNPGKGCAKGPQEYPGKPKGGVSHGPPLMAQKYNT*
JGI24006J15134_100680545	3300001450	Marine	MRMAGQFLKPYVNPGKGCAKGPQEYPDKPKGGVSHGPPLMAQKYST*
JGI24006J15134_100731185	3300001450	Marine	MRMAGQALKPMVNTGEGCATKPETYPAKPKGGMSHGPKLLGQ
JGI24006J15134_100868111	3300001450	Marine	MDNDFPTRMAGQALQPMVNTGEGCAKKPEAYPAKPRGGMSHGPQLLGQKYV*
JGI24006J15134_100919583	3300001450	Marine	MRMAGQFLKPHVNPGKGCAKGPQEYPDKPKGGVSHGPPLMAQKYNT*
JGI24006J15134_100938523	3300001450	Marine	MRMAGQALKPMVNTGEGCATXPETYPAKPKGGVSHGPPLLGQKYV*
JGI24006J15134_100951954	3300001450	Marine	MDNDFPTRMAGQALRPMVNTGEGCAKKPETYPAKPRGGMSHGPPLYSKQPD*
JGI24006J15134_101222532	3300001450	Marine	MRMAGQALKPMVNTGEGCATKPETYPAKPKGGVSHGPPLYSKQPD*
JGI24006J15134_101613203	3300001450	Marine	MDNDFPTRMAGQALRPMVNTGEGCAKKPEMYPAQPRGGMSHGPKLLGQRNG*
JGI24006J15134_101885891	3300001450	Marine	MDNDFPTRMAGQALQPMVNTGEGCAKKPETYPAKPRGGMSHGPQLLGQKYV*
JGI24006J15134_101887722	3300001450	Marine	MRMAGQALKPMVNTGKGCATKPETYPAKPKGGVXHGPPLLGQQYSKQPD*
JGI24006J15134_102023101	3300001450	Marine	MRMAGQALKPMVNTGEGCATKPETYPAKPKGGVSHGPPLYS
JGI24003J15210_100034487	3300001460	Marine	MDNDFPTRMAGQALQPYVNTGEGCAKMPAKYPAKPRGGMSHGPPLLGQRNG*
JGI24003J15210_100036607	3300001460	Marine	MRMAGQAXKPMVNSGXGCATKPEIYPAKPKGGSSHGPTLLGQNYG*
JGI24003J15210_101507622	3300001460	Marine	MRMAGEILKPLVNTGEGCATKPESYPAKPRGGTSHGPQLLGQKYV*
JGI24513J20088_10069534	3300001720	Marine	MRMAGQFLKPHVNPGKGCAKGPQEYPDKPKGGVSHGPPLMTQKYST*
JGI24513J20088_10099865	3300001720	Marine	VRMAGQFLKPYVNPGKGCAKGPQEYPDKPKGGVSHGP
GOS2222_10138673	3300001940	Marine	MRMAGQALKPSVNTGMGCATKPESYPAKPKGGMSHGPELLGQKYV*
KVRMV2_1000287622	3300002231	Marine Sediment	MRMAGQALQPYVNTGQGCAKQPEKYPPKPQGGMSHGPELLDSYVIHSSX*
KVRMV2_1004100942	3300002231	Marine Sediment	MRMAGQALEPYVNTGKGCATKPEKYPPKPKGGTSNGPKLMQSYV*
JGI26260J51721_10599522	3300003580	Marine	MDNDFPTRMAGQALQPYVNTGEGCAKMPAKYPAKPRGGMSHGPALLGQRNG*
Ga0055584_1016836812	3300004097	Pelagic Marine	MDNDFPTRMAGQALRPMVNTGEGCAKKPETYPAKPRGGMSHGPQLLGQVNVSR*
Ga0065861_10378096	3300004448	Marine	MRMAGQVLKPMVNTGEGCATKPETYPAKPKGGMSHGPQLLGQKYV*
Ga0066222_10997152	3300004460	Marine	MRMAGQALKPMVNTGEGCATKPETYPAKPKGGMSHGPQLLGQKYV*
Ga0066223_11022315	3300004461	Marine	MRMAGQALKPLVNTGEGCATKPETYPAKPKGGVSHGPPLLGQKYV*
Ga0098060_10046059	3300006921	Marine	MRMAGQALKPMVNTGEGCATKPETYPAKPKGGMSHGPQLLGQNYV*
Ga0098060_10183236	3300006921	Marine	MDNDFPTRMAGQALRPMVNTGKGCAKKPEVYPPTPRGGMSHGPKLLGQKNG*
Ga0098060_10213235	3300006921	Marine	VDNDFPTRMAGQALQPYVNTGEGCAKMPEKYPAKPRGGMSHGPKLLGQRNG*
Ga0098060_10239343	3300006921	Marine	MDNDFPTRMAGQALQPYVNTGGGCAKMPAKYPAKPRGGMSHGPALLGQRNG*
Ga0098060_10475142	3300006921	Marine	MDNDFPSRMAGQALLPMVNTGEGCAKKPERYPAKPNGGMSHGPKIIKSYV*
Ga0105749_11372711	3300007864	Estuary Water	NDFSTRMAGQALRPMVNTGKGCAKKPETYPAKPRGGMSHGPPLLGQRNV*
Ga0105739_11315822	3300007954	Estuary Water	MRMAGQALKPMVNTGEGCATKPETYPAKPKGGMSHGPKLLGQTYV*
Ga0105741_10155563	3300007956	Estuary Water	MRMAGQALQPMVNSGAGCATKPETYPAKPKGGMSHGPQLLGQKYV*
Ga0105741_11433023	3300007956	Estuary Water	LPPATNPGEGCATKPETYPAKPKGGISHGPQLLGQKYV*
Ga0105748_102034892	3300007992	Estuary Water	MDNDFPTRMAGQALQPYVNTGEGCAKMPEKYPAKPRGGMSHGPALLGQRNG*
Ga0105748_103383371	3300007992	Estuary Water	MRMAGEIFKPLVNTGEGCATKPESYPAKPRGGTSHGPQLLGQKYV*
Ga0102814_101461454	3300009079	Estuarine	RMAGQALKPMVNTGEGCATKPETYPAKPHGGMSHGPQLLGQKYV*
Ga0102815_100247524	3300009080	Estuarine	MRMAGQALKPMVNTGEGCATKPETYPAKPHGGMSHGPQLLGQKYVQNTKEACKA*
Ga0115011_105030203	3300009593	Marine	MDNDFPTRMAGQALMSYMGSGEGCAQKPEKYPPKPRGGMSHGPELIKSYVR*
Ga0115011_110445102	3300009593	Marine	MAGEALKPKVNTGKGCATKPEKYPAQPKGGVSHGPKLIG*
Ga0181377_10150082	3300017706	Marine	MDNDFPTRMAGQALRPMVNTGEGCAKKPEVYPPTPRGGMSHGPKLLGQKNG
Ga0181391_10840514	3300017713	Seawater	MDNDFPTRMAGQALQPYVNTGEGCAKIPAKYPAKPRGGMSHGPALLGQRNG
Ga0181412_10007046	3300017714	Seawater	MDNDFPTRMAGQALRPMVNTGEGCAKKPETYPPTPRGGMSHGPKLLGQTHAPR
Ga0181412_10644243	3300017714	Seawater	MRMAGQALMPMVNSGEGCATKPETYPVKPKGGSSHGPKLLGHNYG
Ga0181390_10534614	3300017719	Seawater	MIHVMKEFYKRSRAVDNDFPTRMAGQALQPYVNTGEGCAKMPAKYPAKPRGGMSHGPALLGQRNG
Ga0181398_100045922	3300017725	Seawater	MLIRMAGQALKPMVNTGEGCASKPETYPAKPRGGTSHGPQLLGQKYV
Ga0181398_10023484	3300017725	Seawater	MDNQRMAGQALKPMVNTGDGCATKPETYPAKPKGGMSHGPKLLGQTYV
Ga0181398_10142155	3300017725	Seawater	MDNDFPIRMAGQALQPYVNTGEGCAKMPEKYPAKPRGGMSHGPALLGQRNG
Ga0181398_11625031	3300017725	Seawater	MDNDFPTRMAGQALQPYVNTGEGCAKMPEKYPAKPRGGMSHGPALL
Ga0181381_10132064	3300017726	Seawater	MRMAGQALQPYVNTGKGCSTKPEKYPPKPKGGTSHGPKLMQSYV
Ga0181419_10002094	3300017728	Seawater	MLVRMAGQALKPMVNTGEGCATKPETYPAKPKGGVSHGPPLLGQKYV
Ga0181419_10609161	3300017728	Seawater	MDNDFPTRMAGQILRPMVNTGEGCAKKPETYPAQPRGGMSHGPKLLGQRNG
Ga0181417_10531122	3300017730	Seawater	MRMAGQALKPMVNTGEGCATKPETYPAKPHGGMSHGPELLGQKYV
Ga0181417_10776281	3300017730	Seawater	MRMAGQALQPMVNSGAGCATKPETYPAKPKGGMSHGPQ
Ga0181417_10776284	3300017730	Seawater	LEPMVNTGKGCATKPETYPAKPKGGMSHGPQLLGQKYV
Ga0181431_10228935	3300017735	Seawater	MDNDFPTRMAGQALQPYVNTGEGCAKMPAKYPAKPRGGMSHGPELLGQRNG
Ga0181428_10067495	3300017738	Seawater	MRMAGQALKPMVNTGEGCATKPETYPAKPNGGMSHGPQLLGQKYV
Ga0181418_11056841	3300017740	Seawater	MRMAGQALQPMVNSGAGCATKPETYPAKPKGGMSHGPQL
Ga0181399_10383612	3300017742	Seawater	MDNQRMAGQALKPMVNTGEGCATKPETYPAKPKGGMSHGPKLLGQTYV
Ga0181400_11871343	3300017752	Seawater	VEVLMRMAGQALQPMVNTGKGCATKPETYPAKPKGGMSHGPQLLGQKYV
Ga0181382_10247923	3300017756	Seawater	MDNDFPTRMAGQALMPYVNPGQGCAKKPDQYPAQPKGGMSHGPQLMESYVSRK
Ga0181382_10486283	3300017756	Seawater	MRMAGQALQSYVNTGEGCAKKPEKYPPKPKGGTSHGPKLMQSYV
Ga0181382_11431053	3300017756	Seawater	MDNDFPTRMAGQALMPYVNTGQGCAKKPEQYPAKPQGGMSHGPQLMESYVSRK
Ga0181420_10515054	3300017757	Seawater	VDNDFPTRMAGQALRPMVNTGEGCAKKPEVYPPTPRGGMSHGPKLLGQKNG
Ga0181420_11205432	3300017757	Seawater	MRMAGQALQPMVNTGKGCATKPETYPAKPKGGMSHGTQLLGQKYV
Ga0181420_12047541	3300017757	Seawater	MDNDFPTRMAGQALQPMVNTGEGCAKKPETYPAKPRGGMSHGPPLLGQRNG
Ga0181420_12086202	3300017757	Seawater	MRMAGQALKPMVNTGEGCATKPETYPAKPKGGMSHGPKLMGQTYV
Ga0181422_10275861	3300017762	Seawater	VLMRMAGQALKPMVNTGEGCATKPETYPAKPHGGMSHGPQLLGQKYV
Ga0181422_11126483	3300017762	Seawater	MRMAGQALQPMVNTGKGCATKPETYPAKPKGGMSHGPQLLGQKYV
Ga0181422_12427291	3300017762	Seawater	MRMAGQALQPMVNSGKGCATKPETYPAKPKGGMSHGPQLLGQKYV
Ga0181410_10746574	3300017763	Seawater	AVDNDFPTRMAGQALQPYVNTGEGCAKMPAKYPAKPRGGMSHGPELLGQRNG
Ga0181385_11101072	3300017764	Seawater	MRMAGQALKPMVNTGKGCATKPETYPAKPKGGISHGPPLLGQKYV
Ga0181430_11248942	3300017772	Seawater	MANQRMAGQALKPMVNTGEGCATKPETYPAKPKGGMSHGPKLLGQTYV
Ga0181394_10582733	3300017776	Seawater	MRMAGQALKPMVNAGEGCATKPETYPAKPKGGMSHGPKLMGQTYV
Ga0181379_12582692	3300017783	Seawater	MDTDFPTRMAGQALLPMVNTGEGCAKKPERYPAKPNGGMSHGPSIIKSYV
Ga0181379_13008191	3300017783	Seawater	MDNDFPTRMAGQALRPMVNTGKGCAKTPPKYPAKPSGGMSHGPPLLGQQNV
Ga0211526_10162042	3300020264	Marine	MDNDFPTRMAGQALMPYVNPGQGCAKKPEQYPAQPKGGMSHGPQLMESYVSRK
Ga0211506_100073013	3300020365	Marine	MAGQALMPYVNPGQGCAKKPEQYPAQPKGGMSHGPQLMESYVSRK
Ga0211498_100204195	3300020380	Marine	MDNDFPTRMAGQALMPYVNPGQGCAKKPEQYPAQPKGGMSHGPKLMESYVSRK
Ga0211557_100839523	3300020418	Marine	MRMAGDFLKPHVDPGQGCAKKPEEYPAKPRGGFSHGPKLLGQRNG
Ga0211556_100104769	3300020432	Marine	MRMAGDFLKPHVNPGQGCAKKPEEYPAKPRGGFSHGPKLLGQRNG
Ga0211473_101948961	3300020451	Marine	EKQIMDNDFPTRMAGQALMPFVNPGQGCAKKPEQYPAQPKGGMSHGPQLMESYVSRK
Ga0211473_104775522	3300020451	Marine	MDNDFPTRMAGQALMPYVNPGEGCAKKPEKYPAKPQGGMSHGPELIKSYMR
Ga0211473_104877893	3300020451	Marine	MDNDFPTRMAGQMLRPYVNSGEGCAKKPEAYPARPKPTMSHGNPTTMLFPR
Ga0211473_105608131	3300020451	Marine	VMDNDFPTRMAGQALMSYMGSGEGCAQKPEKYPPKPRGGMSHGPELIKSYVR
Ga0211545_104480971	3300020452	Marine	MANQRMAGQALKPLVNTGEGCATKPETYPAKPKGGVSHGPPLL
Ga0211550_100868632	3300020453	Marine	MDNDFPTRMAGQALMSYMGSGEGCAQKPEKYPPKPRGGMSHGPELIKSYMR
Ga0211548_101414075	3300020454	Marine	MDNDFPTRMAGQALMSYMGSGEGCAQKPEKYPPKPRGGMSHGPELIKSYVR
Ga0211546_100519765	3300020462	Marine	MRMAGQALQPMVNTGKGCATKPETYPAKPKGGISHGPPLLGQKYV
Ga0224906_10427353	3300022074	Seawater	MAGSSQFLKTLVNTGEGCATKPEQYPAKPKGGISHGPPLKQR
Ga0224906_11229963	3300022074	Seawater	MRMAGQALQPYVNTGEGCAKQPEKYPPKPKGGTSHGPK
Ga0224906_11406822	3300022074	Seawater	MRMAGQALQPYVNTGEGCAKKPEKYPPKPKGGTSHGPKLMQSYV
(restricted) Ga0233412_101738762	3300023210	Seawater	MDNDFPTRMAGQALQPYVNTGEGCAKMPAKYPAKPRGGMSHGPALLGQRNG
(restricted) Ga0255040_103337582	3300024059	Seawater	MRMAGQALKPMVNTGEGCATKPETYPAKPHGGMSHGPQLLGQKYV
(restricted) Ga0233438_100521532	3300024255	Seawater	MGNQRMAGQALKPMVNTGEGCATKSETYPAKPKGGMSHGPQLLGQKYV
Ga0207896_10100233	3300025071	Marine	MRMAGQFLKPHVNPGKGCAKGPQEYPDKPKGGVSHGPPLMTQKYST
Ga0207896_10245253	3300025071	Marine	MRMAGQFLKPYVNPGKGCAKGPQEYPGKPKGGVSHGPPLIAQKYST
Ga0207896_10766382	3300025071	Marine	MRMAGQALKPMVNTGEGCATKPETYPAKPKGGVSHGPPLLGQKYV
Ga0208669_10035965	3300025099	Marine	MDNDFPTRMAGQALQPYVNTGGGCAKMPAKYPAKPRGGMSHGPALLGQRNG
Ga0208669_10083172	3300025099	Marine	MRMAGQALKPMVNTGEGCATKPETYPAKPKGGMSHGPQLLGQNYV
Ga0208669_10272634	3300025099	Marine	VDNDFPTRMAGQALQPYVNTGEGCAKMPEKYPAKPRGGMSHGPKLLGQRNG
Ga0209535_100043653	3300025120	Marine	MDNDFPTRMAGQALQPYVNTGEGCAKMPAKYPAKPRGGMSHGPPLLGQRNG
Ga0209535_10170959	3300025120	Marine	MRMAGQAFKPMVNSGKGCATKPEIYPAKPKGGSSHGPTLLGQNYG
Ga0209535_10223593	3300025120	Marine	MRMAGQKLKHMVNTGKGCAIRPETYPARPHGGMSHGPQLLGQKYV
Ga0209535_10364823	3300025120	Marine	MRMAGEILKPLVNTGEGCATKPESYPAKPRGGTSHGPQLLGQKYV
Ga0209634_11199162	3300025138	Marine	MRMAGQFLKPHVNPGKGCAKGPQEYPDKPKGGVSHGPPLMAQKYST
Ga0209756_11651663	3300025141	Marine	MRMAGQALKPMVNTGEGCATKPETFPAKPKGGVSHGPPLLGQKYV
Ga0209337_10169794	3300025168	Marine	MRMAGQALKPMVNTGEGCATKPETYPAKPKGGISHGPQLLGQKYV
Ga0209337_10233937	3300025168	Marine	MRMAGQALKPAVNTGKGCATKPETYPAKPHGGSSHGPQLLGQKYV
Ga0209337_10243146	3300025168	Marine	MDNDFPTRMAGQALQPYVNTGEGCAKMPAKYPAKPSGGMSHGPPLLGQRNG
Ga0209337_10430862	3300025168	Marine	MRMAGQALKPMVNTGEGCATKPETYPAKPKGGMSHGPQLLGQKYV
Ga0209337_10615452	3300025168	Marine	MRMAGQALKPMVNTGEGCATKPETFPAKPKGGVSHGPPLLGQKPE
Ga0209337_10695765	3300025168	Marine	MDNDFPTRMAGQALRPMVNTGEGCAKKPEMYPAQPRGGMSHGPKLLGQRNG
Ga0209337_11155924	3300025168	Marine	MDNDFPTRMAGQALRSYVNPGEGCAKKPDRYPAKPKGGMSHGPKLLQSYV
Ga0209337_11175382	3300025168	Marine	VEVLMRMAGQALKPMVNTGKGCATKPETYPAKPKGGVSHGPPLLGQQYSKQPD
Ga0209337_11222212	3300025168	Marine	MDNDFPTRMAGQALRPYVNPGEGCAKKPDRYPAKPKGGMSHGPKLLQSYV
Ga0209337_11433923	3300025168	Marine	MRMAGQALKPMVNTGEGCATKPETYPAKPKGGMSHGPKLLGQTYV
Ga0209337_11543462	3300025168	Marine	MRMAGQALKPMVNTGEGCATKPETYPAKPKGGVSHGPPLYSKQPD
Ga0209337_11915432	3300025168	Marine	MDNDFPTRMAGQALRPMVNTGEGCAKKPETYPAKPSGGMSHGPQLLGQKYV
Ga0209337_12881402	3300025168	Marine	MRMAGQALKPAVNTGKGCATKPETYPAKPHGGSSHGPQLVGQKYV
Ga0209337_13441841	3300025168	Marine	MRMAGQFLKPYVNPGEGCAKAPQEYPDKPKGGVSHGPPLM
Ga0257110_10108705	3300028197	Marine	MDNDFPTRMAGQALRPMVNTGEGCAKKPETYPPKPRGGMSHGPKLLGQKNG
Ga0185543_100119414	3300029318	Marine	MDNDFPTRMAGQALMPYVNPGQGCAKKPERYPAQPKGGMSHGPQLIESYVSRK
Ga0185543_100122410	3300029318	Marine	MRMAADFLPPYVNPGQGCAKKPEEYPAKPRGGFSHGPKLLGQRNG
Ga0183755_10045088	3300029448	Marine	MRMAGQALRPMVNTGEGCATKPETYPAKPKGGMSHGPTLLGQK
Ga0183755_10273203	3300029448	Marine	MDNDFPTRMAGQALRPMVNTGQGCAKKPETYPAKPRGGMSHGPPLLGQQNV
Ga0302114_104133412	3300031621	Marine	MRMAGQALKPMVNTGEGCATKPETYPAKPKGGVSHGPQLLGQKYV
Ga0315322_101778653	3300031766	Seawater	MIHVMKEFYKRSRAVDNDFPTRMAGQALQPYVNTGEGCAKMPAKYPAKPRGGMSHGPELLGQRNG
Ga0315320_100253141	3300031851	Seawater	MDNDFPTRMAGQALQPYVNTGEGCAKMPEKYPAKPRGGMSHGPALLGQRNG
Ga0315320_105735073	3300031851	Seawater	NDFPTRMAGQALQPYVNTGEGCAKMPEKYPAKPRGGMSHGPALLGQRNG
Ga0315315_102173734	3300032073	Seawater	MDTDFPTRMAGQALLPMVNTGEGCAKKPERYPAKPNGGMSHGPKIIKSYV
Ga0315315_109278103	3300032073	Seawater	MANQRMAGQALKPMVNTGEGCATKPETYPAKPRGGMSHGPQLLGQKYV
Ga0315315_114082222	3300032073	Seawater	MDNDFPTRMAGQALQPMVNTGEGCAKKPETYPAKPRGGMSHGPPLLGQRNV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters