Metagenome / Metatranscriptome Family F056195

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056195
Family Type	Metagenome / Metatranscriptome
Number of Sequences	138
Average Sequence Length	64 residues
Representative Sequence	MAEVSDIAVYQKLTAIADELDQMAAEGASLVGDAALTTAARTVRGMASAVYQHIMNAEDESLDS
Number of Associated Samples	88
Number of Associated Scaffolds	138

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	84.78 %
% of genes near scaffold ends (potentially truncated)	18.12 %
% of genes from short scaffolds (< 2000 bps)	77.54 %
Associated GOLD sequencing projects	72
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (72.464 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere (11.594 % of family members)
Environment Ontology (ENVO)	Unclassified (58.696 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (65.942 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 58.70% β-sheet: 0.00% Coil/Unstructured: 41.30%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
a.25.1.1: Ferritin	d2fzfa1	2fzf	0.8776
f.63.1.1: Claudin	d3jbre_	3jbr	0.87375
a.25.1.2: Ribonucleotide reductase-like	d3n20b_	3n20	0.86071
a.7.14.0: automated matches	d5fvka_	5fvk	0.85659
a.25.1.1: Ferritin	d1moja_	1moj	0.85638

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 138 Family Scaffolds
PF00903	Glyoxalase	10.87
PF00042	Globin	7.25
PF02566	OsmC	5.07
PF12681	Glyoxalase_2	4.35
PF04140	ICMT	3.62
PF00593	TonB_dep_Rec	2.17
PF13493	DUF4118	1.45
PF04191	PEMT	1.45
PF07715	Plug	1.45
PF04909	Amidohydro_2	1.45
PF01872	RibD_C	1.45
PF00254	FKBP_C	1.45
PF00072	Response_reg	0.72
PF07568	HisKA_2	0.72
PF01145	Band_7	0.72
PF13412	HTH_24	0.72
PF07859	Abhydrolase_3	0.72
PF00383	dCMP_cyt_deam_1	0.72
PF02771	Acyl-CoA_dh_N	0.72
PF00392	GntR	0.72
PF12146	Hydrolase_4	0.72
PF00144	Beta-lactamase	0.72
PF13522	GATase_6	0.72
PF00916	Sulfate_transp	0.72
PF13899	Thioredoxin_7	0.72
PF11911	DUF3429	0.72
PF11776	RcnB	0.72
PF12697	Abhydrolase_6	0.72
PF12973	Cupin_7	0.72
PF01814	Hemerythrin	0.72
PF07394	DUF1501	0.72

COG ID	Name	Functional Category	% Frequency in 138 Family Scaffolds
COG1017	Hemoglobin-like flavoprotein	Energy production and conversion [C]	7.25
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	5.07
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	5.07
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.45
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.45
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.72
COG0659	Sulfate permease or related transporter, MFS superfamily	Inorganic ion transport and metabolism [P]	0.72
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.72
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.72
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.72
COG2233	Xanthine/uracil permease	Nucleotide transport and metabolism [F]	0.72
COG2252	Xanthine/guanine/uracil/vitamin C permease GhxP/GhxQ, nucleobase:cation symporter 2 ( NCS2) family	Nucleotide transport and metabolism [F]	0.72
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.72
COG3920	Two-component sensor histidine kinase, HisKA and HATPase domains	Signal transduction mechanisms [T]	0.72

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.46 %
Unclassified	root	N/A	27.54 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.46 %
Unclassified	root	N/A	27.54 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	72.46 %
Unclassified	root	N/A	27.54 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	66.67 %
Unclassified	root	N/A	27.54 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.45 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	62.32 %
Unclassified	root	N/A	27.54 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.45 %

Name	Rank	Taxonomy	Distribution
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	41.30 %
Unclassified	root	N/A	27.54 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.45 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %

Name	Rank	Taxonomy	Distribution
Caulobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	41.30 %
Unclassified	root	N/A	27.54 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.45 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %

Name	Rank	Taxonomy	Distribution
Phenylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	39.86 %
Unclassified	root	N/A	27.54 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.45 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %

Name	Rank	Taxonomy	Distribution
unclassified Phenylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium	38.41 %
Unclassified	root	N/A	27.54 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.45 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %

Name	Rank	Taxonomy	Distribution
Phenylobacterium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	38.41 %
Unclassified	root	N/A	27.54 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.45 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.72 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459006\|GBPF9FW02GR832	Not Available	505	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100362638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300004463\|Ga0063356_101911033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	895	Open in IMG/M
3300005327\|Ga0070658_10023999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4894	Open in IMG/M
3300005327\|Ga0070658_10171630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1822	Open in IMG/M
3300005327\|Ga0070658_11188350	Not Available	663	Open in IMG/M
3300005327\|Ga0070658_11458967	Not Available	593	Open in IMG/M
3300005329\|Ga0070683_100375784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1354	Open in IMG/M
3300005329\|Ga0070683_102020600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300005329\|Ga0070683_102185773	Not Available	531	Open in IMG/M
3300005331\|Ga0070670_101745585	Not Available	573	Open in IMG/M
3300005335\|Ga0070666_10452536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	927	Open in IMG/M
3300005336\|Ga0070680_100070632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2868	Open in IMG/M
3300005338\|Ga0068868_101537891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	624	Open in IMG/M
3300005338\|Ga0068868_101656243	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	602	Open in IMG/M
3300005339\|Ga0070660_101588933	Not Available	556	Open in IMG/M
3300005344\|Ga0070661_100465054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1008	Open in IMG/M
3300005353\|Ga0070669_100212032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1528	Open in IMG/M
3300005366\|Ga0070659_100003109	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11808	Open in IMG/M
3300005436\|Ga0070713_102363536	Not Available	514	Open in IMG/M
3300005456\|Ga0070678_100795362	Not Available	858	Open in IMG/M
3300005458\|Ga0070681_11821204	Not Available	536	Open in IMG/M
3300005530\|Ga0070679_100882915	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300005537\|Ga0070730_10000006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	364858	Open in IMG/M
3300005537\|Ga0070730_10000330	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	58107	Open in IMG/M
3300005537\|Ga0070730_10161453	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1514	Open in IMG/M
3300005539\|Ga0068853_100294624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1498	Open in IMG/M
3300005539\|Ga0068853_100322539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1432	Open in IMG/M
3300005539\|Ga0068853_101042859	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300005555\|Ga0066692_10181629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1308	Open in IMG/M
3300005614\|Ga0068856_100355391	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1484	Open in IMG/M
3300005614\|Ga0068856_101540817	Not Available	678	Open in IMG/M
3300005618\|Ga0068864_100156921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2066	Open in IMG/M
3300005618\|Ga0068864_101543390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	668	Open in IMG/M
3300005841\|Ga0068863_100636994	Not Available	1057	Open in IMG/M
3300005841\|Ga0068863_102711853	Not Available	504	Open in IMG/M
3300005842\|Ga0068858_100826686	Not Available	904	Open in IMG/M
3300005843\|Ga0068860_102054011	Not Available	593	Open in IMG/M
3300005843\|Ga0068860_102645035	Not Available	521	Open in IMG/M
3300006028\|Ga0070717_10010337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7041	Open in IMG/M
3300006028\|Ga0070717_10167194	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1911	Open in IMG/M
3300009093\|Ga0105240_10001948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	34189	Open in IMG/M
3300009093\|Ga0105240_10049638	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	5295	Open in IMG/M
3300009093\|Ga0105240_10176208	All Organisms → cellular organisms → Bacteria	2528	Open in IMG/M
3300009093\|Ga0105240_10379602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1596	Open in IMG/M
3300009098\|Ga0105245_10258642	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1693	Open in IMG/M
3300009176\|Ga0105242_10268329	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1545	Open in IMG/M
3300009177\|Ga0105248_10000696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	38007	Open in IMG/M
3300009177\|Ga0105248_11891443	Not Available	677	Open in IMG/M
3300009551\|Ga0105238_10067667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3572	Open in IMG/M
3300009551\|Ga0105238_11646035	All Organisms → cellular organisms → Bacteria → Proteobacteria	672	Open in IMG/M
3300009553\|Ga0105249_10377451	All Organisms → cellular organisms → Bacteria → Proteobacteria	1443	Open in IMG/M
3300009553\|Ga0105249_11874385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	672	Open in IMG/M
3300009553\|Ga0105249_12212364	Not Available	623	Open in IMG/M
3300010371\|Ga0134125_10073686	All Organisms → cellular organisms → Bacteria	3798	Open in IMG/M
3300010371\|Ga0134125_11519743	Not Available	729	Open in IMG/M
3300010373\|Ga0134128_10082152	All Organisms → cellular organisms → Bacteria → Proteobacteria	3679	Open in IMG/M
3300010373\|Ga0134128_11869457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	661	Open in IMG/M
3300010373\|Ga0134128_12731177	Not Available	544	Open in IMG/M
3300010375\|Ga0105239_10496180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1388	Open in IMG/M
3300010375\|Ga0105239_10766876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1104	Open in IMG/M
3300010396\|Ga0134126_10294571	All Organisms → cellular organisms → Bacteria → Proteobacteria	1906	Open in IMG/M
3300010396\|Ga0134126_12303078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	587	Open in IMG/M
3300010397\|Ga0134124_10279786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	1547	Open in IMG/M
3300010399\|Ga0134127_11447185	Not Available	759	Open in IMG/M
3300010399\|Ga0134127_12749960	Not Available	572	Open in IMG/M
3300013104\|Ga0157370_11940653	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300013296\|Ga0157374_10229257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1824	Open in IMG/M
3300013306\|Ga0163162_12303109	Not Available	619	Open in IMG/M
3300014325\|Ga0163163_10004244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	12215	Open in IMG/M
3300014968\|Ga0157379_12028969	Not Available	569	Open in IMG/M
3300014969\|Ga0157376_10620057	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1079	Open in IMG/M
3300015053\|Ga0137405_1312068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1515	Open in IMG/M
3300015206\|Ga0167644_1003656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	9139	Open in IMG/M
3300020070\|Ga0206356_11824049	All Organisms → cellular organisms → Bacteria	606	Open in IMG/M
3300021170\|Ga0210400_10000201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	75663	Open in IMG/M
3300021403\|Ga0210397_11203830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	589	Open in IMG/M
3300021404\|Ga0210389_10347496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1164	Open in IMG/M
3300025909\|Ga0207705_10006553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8623	Open in IMG/M
3300025909\|Ga0207705_10305961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1220	Open in IMG/M
3300025909\|Ga0207705_10753242	Not Available	757	Open in IMG/M
3300025909\|Ga0207705_10768485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	748	Open in IMG/M
3300025913\|Ga0207695_10001012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	49532	Open in IMG/M
3300025913\|Ga0207695_10141320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	2355	Open in IMG/M
3300025913\|Ga0207695_10491895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1109	Open in IMG/M
3300025913\|Ga0207695_10964471	Not Available	732	Open in IMG/M
3300025919\|Ga0207657_10639247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	829	Open in IMG/M
3300025919\|Ga0207657_11226879	Not Available	569	Open in IMG/M
3300025923\|Ga0207681_10525653	Not Available	971	Open in IMG/M
3300025924\|Ga0207694_10211020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1582	Open in IMG/M
3300025924\|Ga0207694_10765402	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	815	Open in IMG/M
3300025924\|Ga0207694_11133695	All Organisms → cellular organisms → Bacteria → Proteobacteria	662	Open in IMG/M
3300025924\|Ga0207694_11204556	Not Available	641	Open in IMG/M
3300025925\|Ga0207650_10613305	Not Available	916	Open in IMG/M
3300025927\|Ga0207687_11056359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	697	Open in IMG/M
3300025932\|Ga0207690_10000180	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	48788	Open in IMG/M
3300025934\|Ga0207686_10465690	All Organisms → cellular organisms → Bacteria → Proteobacteria	975	Open in IMG/M
3300025938\|Ga0207704_10000692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	14879	Open in IMG/M
3300025941\|Ga0207711_10003351	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	13877	Open in IMG/M
3300025941\|Ga0207711_10822218	Not Available	865	Open in IMG/M
3300025944\|Ga0207661_11430184	Not Available	634	Open in IMG/M
3300025961\|Ga0207712_10190543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1618	Open in IMG/M
3300025961\|Ga0207712_11792910	Not Available	550	Open in IMG/M
3300025981\|Ga0207640_12082452	Not Available	514	Open in IMG/M
3300026078\|Ga0207702_10330875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1453	Open in IMG/M
3300026095\|Ga0207676_10966401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium	838	Open in IMG/M
3300026142\|Ga0207698_12438972	Not Available	534	Open in IMG/M
3300027857\|Ga0209166_10000023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	240883	Open in IMG/M
3300027857\|Ga0209166_10000787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	30499	Open in IMG/M
3300027857\|Ga0209166_10696600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	511	Open in IMG/M
3300027876\|Ga0209974_10179736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	774	Open in IMG/M
3300028379\|Ga0268266_10971865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	822	Open in IMG/M
3300028381\|Ga0268264_12557588	Not Available	515	Open in IMG/M
3300028786\|Ga0307517_10008394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae	14821	Open in IMG/M
3300029951\|Ga0311371_12103300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	594	Open in IMG/M
3300030520\|Ga0311372_10549880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1672	Open in IMG/M
3300030520\|Ga0311372_10653430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1484	Open in IMG/M
3300031251\|Ga0265327_10105578	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1353	Open in IMG/M
3300031543\|Ga0318516_10462687	Not Available	729	Open in IMG/M
3300031616\|Ga0307508_10408626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	949	Open in IMG/M
3300031754\|Ga0307475_11392972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	541	Open in IMG/M
3300031765\|Ga0318554_10158332	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1287	Open in IMG/M
3300031938\|Ga0308175_100013248	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6309	Open in IMG/M
3300031938\|Ga0308175_100484532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1312	Open in IMG/M
3300031938\|Ga0308175_100809624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	1025	Open in IMG/M
3300031938\|Ga0308175_101165879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	856	Open in IMG/M
3300031938\|Ga0308175_101850727	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	676	Open in IMG/M
3300031939\|Ga0308174_10027081	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	3640	Open in IMG/M
3300031996\|Ga0308176_10929566	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	915	Open in IMG/M
3300031996\|Ga0308176_12249269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	582	Open in IMG/M
3300031996\|Ga0308176_12828519	Not Available	516	Open in IMG/M
3300032065\|Ga0318513_10523630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	580	Open in IMG/M
3300032074\|Ga0308173_10766004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	886	Open in IMG/M
3300032074\|Ga0308173_11238231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	698	Open in IMG/M
3300032180\|Ga0307471_100101444	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	2613	Open in IMG/M
3300033180\|Ga0307510_10007292	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	13170	Open in IMG/M
3300033475\|Ga0310811_11403126	Not Available	537	Open in IMG/M
3300034268\|Ga0372943_0009446	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → Caulobacteraceae → Phenylobacterium → unclassified Phenylobacterium → Phenylobacterium sp.	5070	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	59.42%
Environmental	Environmental	40.58%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	59.42%
Terrestrial	Environmental → Terrestrial	40.58%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	39.13%
Soil	Environmental → Terrestrial → Soil	38.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	17.39%
Roots	Host-Associated → Plants → Roots	2.90%
Peat	Environmental → Terrestrial → Peat	2.17%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	31.16%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.67%
Soil	Host-Associated → Plants → Rhizosphere → Soil	15.22%
Loam	Environmental → Terrestrial → Soil → Loam	7.25%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.17%
Unclassified	Host-Associated → Plants → Roots → Unclassified	2.17%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.72%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.72%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.67%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	15.22%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.49%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.25%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	7.97%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.52%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.17%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.17%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	2.17%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.72%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.72%

Habitat	Taxonomy	Distribution
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	11.59%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	10.14%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	7.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	7.97%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	6.52%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	6.52%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.07%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	5.07%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	4.35%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.35%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.17%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.17%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.17%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	2.17%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.45%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.45%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.45%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.72%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.72%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.72%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.72%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.72%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.72%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.72%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.72%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.72%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459006	Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cm	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005327	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015206	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G8B, Adjacent to main proglacial river, end of transect (Watson river))	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028786	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM	Host-Associated	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300031251	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG	Host-Associated	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031616	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM	Host-Associated	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033180	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM	Host-Associated	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
L01_05242760	2170459006	Grass Soil	MPPVTDIAVYQKLTEIADELDQMVSEGPSLVGDAALGTAARTVRGMASAVYQHIMST
INPhiseqgaiiFebDRAFT_1003626382	3300000364	Soil	MSGVSDIEVYQXLCAVADDLDAMAAEGASLIGDAALTTAARTVRGMANAVYEQIMSDAGPMDS*
Ga0063356_1019110331	3300004463	Arabidopsis Thaliana Rhizosphere	MNAKPVSDIQVYQTLTAIADELDQLVTEGASLVGDAALTTAARTVRGMAGAVYQHIMG
Ga0070658_100239993	3300005327	Corn Rhizosphere	MAEVSDIAVYQKLSAIADELDQMASEGASLVGDAALTTAARTVRGMASAVYQHIMNAEDESLDS*
Ga0070658_101716302	3300005327	Corn Rhizosphere	MAEVSDIAVYQKLSEIADELDDLAAQGATLVGEAALLTAARTVRGMAGVVYKHIMSDNGAPLDS*
Ga0070658_111883502	3300005327	Corn Rhizosphere	MAEMSDIAVYQKLTEVADELDELAAQGASLVGGVALETAAKTVRGMASAVYKHIMSDRDESSEH*
Ga0070658_114589672	3300005327	Corn Rhizosphere	MAEVSDIAVYQKLTAIADELDQMAAEGASLVGDAALTTAARTVRGMASAVYQHIMNAEDESLDS*
Ga0070683_1003757843	3300005329	Corn Rhizosphere	TDIAVYQKLTELADDLDAMAAEGASLVGEAALTTAARTVRGMATAVYQHIMSSADEALDS
Ga0070683_1020206002	3300005329	Corn Rhizosphere	MAEVSDIAVYQKLSAIADELDQMASEGASLVGDAALNTAARTVRGMASAVYQHIMNSEDESLDS*
Ga0070683_1021857731	3300005329	Corn Rhizosphere	MADVSDIEVYQKLTEIADDLDAMAVQGATLVGNAALTTASRTVRGMASAVYQHIMSERDASLDS*
Ga0070670_1017455851	3300005331	Switchgrass Rhizosphere	MAEVTDIAVYQKLTELADDLDAMAAEGASLVGEAALTTAARTVRGMATAVYQHIMSSADEALDS*
Ga0070666_104525363	3300005335	Switchgrass Rhizosphere	MAEVSDIAVYQKLSAIADELDQMASEGASLVGDAALTTAARTVRGMASAVYQHIMNVQDESLDS*
Ga0070680_1000706323	3300005336	Corn Rhizosphere	MAEVSDIAVYQKLTEIADELDDLAAGGASVVGEVALTTASKTVRGMATAVYQRIMADRDEGLDS*
Ga0068868_1015378912	3300005338	Miscanthus Rhizosphere	MAEVSDIAVYQKLSAIADELDQMASDGASLVGDAALTTAARTVRGMASAVYQHIMNAEDESLDS*
Ga0068868_1016562432	3300005338	Miscanthus Rhizosphere	MAEVTDIAVYQKLTELADDLDAMAAEGASLVGEAALTTAARTVRGMATAVYQHIMSSADETLDS*
Ga0070660_1015889332	3300005339	Corn Rhizosphere	MTEVSDIAVYQKLSQVADELDHMAAEGATMVGEVALNTAAKTVRGMAGAVYQHIMSAGDEKLDS*
Ga0070661_1004650542	3300005344	Corn Rhizosphere	MAEVSDIAVYQKLTAIADELDQMAADGATLVGDAALTTAARTVRGMASAVYQHIMNVEDETLDG*
Ga0070669_1002120322	3300005353	Switchgrass Rhizosphere	MSKVSDVEVYQKLSAVADELEEMAAQGASLIGDAALTTAARTVRGMATAVYERIMAEADESVLDS*
Ga0070659_1000031093	3300005366	Corn Rhizosphere	MAEVSDIAVYQKLTAIADELDQMAADGASLVGDAALTTAARTVRGMASAVYQHIMNAEDESLDS*
Ga0070713_1023635361	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPPVTDIAVYQKLSEIADDLDQLASEDPSLVGEAALNTAARTVRGMATAVYKHIMSTDDETLDS*
Ga0070678_1007953622	3300005456	Miscanthus Rhizosphere	MTEVSDIAVYQKLSQVADELDHMAAEGATMVGEVALNTAAKTVRGMASAVYQHIMSAGDEKLDS*
Ga0070681_118212042	3300005458	Corn Rhizosphere	MAEVSDIAVYQKLTAIADELDQMAADGASLVGDAALTTAARTVRGMASAIYQHIMNVEDESLDS*
Ga0070679_1008829152	3300005530	Corn Rhizosphere	CRGGAMAEVSDIAVYQKLTEIADELDDLAAGGASVVGEVALTTASKTVRGMATAVYQRIMADRDEGLDS*
Ga0070730_10000006171	3300005537	Surface Soil	MAHTTDIAVYQKLTEIADELDEMAAQGATLVGGAALMTASRNVRGMATVVYKHIMNAADERLDS*
Ga0070730_1000033049	3300005537	Surface Soil	MPMPQVSDIAVYQKLSEIADELDELARQGASLVGEAALITAGRTVRGMANAVYKRIMSDQDQDLDS*
Ga0070730_101614532	3300005537	Surface Soil	MVETSDIAVYQKLTELADELDDMAARGATLVGEAALTTASRNVRGMALAVYKHIMGDRQGALDS*
Ga0068853_1002946242	3300005539	Corn Rhizosphere	MAEVTDITVYQKLTEVADELDQMAAEGASMVGVVALETAAKTVRGMATAVYQRIMADRDDELSN*
Ga0068853_1003225393	3300005539	Corn Rhizosphere	QKLTEIADDLDAMAVQGATLVGNAALTTASRTVRGMASAVYQHIMSERDASLDS*
Ga0068853_1010428591	3300005539	Corn Rhizosphere	DIAVYQKLTEIADELDDLAAGGASVVGEVALTTASKTVRGMATAVYQRIMADRDEGLDS*
Ga0066692_101816291	3300005555	Soil	KLSAIADELDQMASEGATLVGGAALSTAARTVRGMASAVYAHIMNNADETRDS*
Ga0068856_1003553912	3300005614	Corn Rhizosphere	MAQTSDIAVYQKLTEIADELEEMAARGASLVGDAALVTAARNARGMATAVYKHIMAESEQRLDS*
Ga0068856_1015408171	3300005614	Corn Rhizosphere	MADVSDIEVYQKLTEIADDLDTMAVQGATLVGNAALTTASRTVRGMASAVYQHIMSERDASLDS*
Ga0068864_1001569214	3300005618	Switchgrass Rhizosphere	MSAVTDIEVYQKLCIVADDLDAMAAEGASLIGDAALTTAARTVRGMANAVYEQIMSDAGPLDS*
Ga0068864_1015433902	3300005618	Switchgrass Rhizosphere	MAEVTDIAVYQKLTELADDLDAMAAEGASLVGEAALTTAARTVRGMATAVYQHIM
Ga0068863_1006369943	3300005841	Switchgrass Rhizosphere	MGQVSDITVYQKLTEIADELDALSADGATLVGEAALSTAARTVRGMATAVYQHIMSDHEDAPKN*
Ga0068863_1027118532	3300005841	Switchgrass Rhizosphere	MSAATDIEVYQKLCTVADDLDAMAAQGASLIGDAALTTAARTVRGMANAVYEQIMSDAGPMDS*
Ga0068858_1008266862	3300005842	Switchgrass Rhizosphere	MAEVTDIAVYQKLTELADDLDAMAAEGASLVGEAALTTAARTVRGMATAVYQHIMSADETLDS*
Ga0068860_1020540112	3300005843	Switchgrass Rhizosphere	GGRSLVMAEVTDIAVYQKLTELADDLDAMAAEGASLVGEAALTTAARTVRGMATAVYQHIMSSADETLDS*
Ga0068860_1026450352	3300005843	Switchgrass Rhizosphere	MSAVTDIEVYQKLCIVADDLDAMAAEGASLIGDAALTTAARTVRGMANAVYEQIMSDA
Ga0070717_100103377	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPPVTDIAVYQKLSELADELDQMASDGPSLVGEAALGTAARTVRGMASAVYQHIMSTGDEKQDS*
Ga0070717_101671942	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MGPVTDITVYQKLTEIADELDVMAAEGPTLVGAAALTTASRTVRGMATAVYQHIMATDGETRDS*
Ga0105240_1000194817	3300009093	Corn Rhizosphere	MATVSDIAVYQKLTEMADELDDLAAQGAGLVGEAALQTASRTLRGMANAVYQHIMSDREPLDS*
Ga0105240_100496384	3300009093	Corn Rhizosphere	MAEVTDIAVYQKLTEVADELDEMAAHGASLVGGAALTTASRTVRGMATAVYQRIMADHDPELDS*
Ga0105240_101762082	3300009093	Corn Rhizosphere	MAELSDIAVYQKLSAIADELDQMASDGASLVGDAALTTAARTVRGMASAVYQHIMNAEDESLDS*
Ga0105240_103796024	3300009093	Corn Rhizosphere	MAEITDIAVYQKLSEVADELDQMAAEGASLVGVVALETAAKTVRNMASAVYQRIMADRDDEPSN*
Ga0105245_102586422	3300009098	Miscanthus Rhizosphere	MAQVSDIAVYQKLSELADELDQLASQGASLVGETALLTAAKTVRGMASAVYQHIMSDRSEGLDS*
Ga0105242_102683293	3300009176	Miscanthus Rhizosphere	MADITDIAVYQKLTEVADELDQMAADGASMVGVVALETASKTVRGMASAVYQRIMADRDDELSN*
Ga0105248_1000069620	3300009177	Switchgrass Rhizosphere	MPPVTDIAVYQKLSEIADELDQMAAEGPSLVGDAALGTAARTVRGMASAVYQHIMATGDEKRDS*
Ga0105248_118914432	3300009177	Switchgrass Rhizosphere	MAEVTDIAVYQKLTELADDLDAIAAQGATLVGEAALTTAARTVRGMATAVYQHIMSDADERLDS*
Ga0105238_100676674	3300009551	Corn Rhizosphere	MAEVSDIAVYQKLSAIADELDQMASEGASLIGDAALTTAARTVRGMASAVYQHIMNAEDESLDS*
Ga0105238_116460351	3300009551	Corn Rhizosphere	MAEVTDITVYQKLTEVADELDQMAAEGASMVGVVALETAAKTVRGMATAVYQRIMA
Ga0105249_103774513	3300009553	Switchgrass Rhizosphere	LRVAAEAVGVSSMSAVTDIEVYQKLCIVADDLDAMAAEGASLIGDAALTTAARTVRGMANAVYEQIMSDAGPLDS*
Ga0105249_118743852	3300009553	Switchgrass Rhizosphere	MPEVSDIAVYQKLSAIADELDQMASDGASLVGDAALTTAARTVRGMASAVYQHIMNAEDESLDS*
Ga0105249_122123642	3300009553	Switchgrass Rhizosphere	MSAVTDIEVYQKLCIVADDLDAMAAEGASLIGDAALTTAARTVRGMANAVYEQIMADAGPMDS*
Ga0134125_100736863	3300010371	Terrestrial Soil	MAEVSDIAVYQKLTAIADELDQMAADGASLVGDAALTTAARTVRGMASAVYQHIMNVADESLDS*
Ga0134125_115197432	3300010371	Terrestrial Soil	MADVSDIEVYQKLSEIADDLDAVAARGATLVGDAALTTAARTVRGMASAVYQHIMSDRDEARQN*
Ga0134128_100821525	3300010373	Terrestrial Soil	MAEVSDIAVYQKLTEVADELDEMAARGASLVGGAALLTAARTVRGMATAVYQRIMSDRDEALDS*
Ga0134128_118694572	3300010373	Terrestrial Soil	MADVSDIEVYQKLSEIADELDAMAARGATLVGDAAVTTAARTVRGMATAVYQHIMAERDAARQN*
Ga0134128_127311772	3300010373	Terrestrial Soil	MAEVSDIAVYQKLTEIADELDDLAAGGASVMGEVALTTASKTVRGMATAVYQRIMADRDEGLDS*
Ga0105239_104961804	3300010375	Corn Rhizosphere	MAEITDIAVYQKLSEVADELDQMAAEGASLVGVVALETAAKTVRNMASAVYQRIMA
Ga0105239_107668761	3300010375	Corn Rhizosphere	MPPVTDIAVYQKLSEIADELDQMAAEGPSLVGDAALGTAARTVRGMASAVYQHIMS
Ga0134126_102945712	3300010396	Terrestrial Soil	MAEVSDIAVYQKLTELADELDEMIAQGAGLVGEAALQTAARTLRGMANAVYQHIMADRETLDS*
Ga0134126_123030781	3300010396	Terrestrial Soil	MAEVSDIAVYQKLTAIADELDQMATDGASLVGDAALTTAARTVRGMASAVYQHIMNVADESLDS*
Ga0134124_102797862	3300010397	Terrestrial Soil	LRVAAEAVGVSAMSAVTDIEVYQKLCIVADDLDAMAAEGASLIGDAALTTAARTVRGMANAVYEQIMSDAGPLDS*
Ga0134127_114471852	3300010399	Terrestrial Soil	MSAPMSDVSDIEVYQKLTEIADDLDAMAVQGATLVGNAALTTASRTVRGMASAVYQHIMSERDASLDS*
Ga0134127_127499602	3300010399	Terrestrial Soil	MAEVSDIAVYQKLTEVADELDEMAARGASLVGGAALLTAARTVRGMATAVYQRIMTDRDEALDS*
Ga0157370_119406532	3300013104	Corn Rhizosphere	MAEVSDIAVYQKLTEIADELDDLAAGGASVVGEVALTTASKTVRGMATAVYQRIMADR
Ga0157374_102292573	3300013296	Miscanthus Rhizosphere	MAEVSDIAVYQKLSEIADELDQLASQGATVVGEGALDTAAKTVRGMASAVYRHIMSTDDETLDS*
Ga0163162_123031091	3300013306	Switchgrass Rhizosphere	MAEVSDIAVYQKLSQIADELEQMASEGATLVGEAALGTASKTVRGMANAVYQRIMADRDDGLDS*
Ga0163163_1000424417	3300014325	Switchgrass Rhizosphere	MAQVSDIAVYQKLSQIADELDLMAADGASLVGEAALLTAARTVRGMANVVYQRIMADDDETLDS*
Ga0157379_120289692	3300014968	Switchgrass Rhizosphere	MAEVTDIAVYQKLTELADDLDAMAAQGATLVGEAALTTAARTVRGMATAVYQHIMSDADERLDS*
Ga0157376_106200572	3300014969	Miscanthus Rhizosphere	MGQVSDITVYQKLTEIADELDALSAEGATLVGEAALSTAARTVRGMATAVYQHIMSDHEAAPKN*
Ga0137405_13120682	3300015053	Vadose Zone Soil	MAQVSDIAVYQKLSEVADELDQLASQGATLVGEVALETAAKTVRGMANAVYKHIMSASDETMDS*
Ga0167644_10036566	3300015206	Glacier Forefield Soil	MAEVSDIAVYQKLTELADELDDMAAQGASLVGNAALTTASQNVRGMALAVYRHIMADREHVLDS*
Ga0206356_118240492	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MAEVSDIAVYQKLTEIADELDDLAAGGASVVGEVALTTASKTVRGMATAVYQRIMADRDEGLDS
Ga0210400_1000020116	3300021170	Soil	MVETSDIAVYQKLTELADELDDMAARGATLVGEAALTTASRNVRGMALAVYKHIMGDRQGALDS
Ga0210397_112038302	3300021403	Soil	MAEVSDIAVYQKLSEVADELDQMAAEGATLVGDVALNTASKTVRGMATAVYKHIMSDRDEKLDS
Ga0210389_103474962	3300021404	Soil	MAEVSDIVVYQKLTEIADELDEMASQGATLVGEAALGTASKTVRGMATAVYKRIMSDRDDGLDS
Ga0207705_100065539	3300025909	Corn Rhizosphere	MAEVSDIAVYQKLTAIADELDQMAAEGASLVGDAALTTAARTVRGMASAVYQHIMNAEDESLDS
Ga0207705_103059612	3300025909	Corn Rhizosphere	MAEVSDIAVYQKLSEIADELDDLAAQGATLVGEAALLTAARTVRGMAGVVYKHIMSDNGAPLDS
Ga0207705_107532422	3300025909	Corn Rhizosphere	MAEMSDIAVYQKLTEVADELDELAAQGASLVGGVALETAAKTVRGMASAVYKHIMSDRDESSEH
Ga0207705_107684851	3300025909	Corn Rhizosphere	MAEVSDIAVYQKLSAIADELDQMASEGASLVGDAALTTAARTVRGMASAVYQHIMNAEDESLDS
Ga0207695_1000101242	3300025913	Corn Rhizosphere	MATVSDIAVYQKLTEMADELDDLAAQGAGLVGEAALQTASRTLRGMANAVYQHIMSDREPLDS
Ga0207695_101413203	3300025913	Corn Rhizosphere	MAEVTDIAVYQKLTEVADELDEMAAHGASLVGGAALTTASRTVRGMATAVYQRIMADHDPELDS
Ga0207695_104918952	3300025913	Corn Rhizosphere	MAELSDIAVYQKLSAIADELDQMASDGASLVGDAALTTAARTVRGMASAVYQHIMNAEDESLDS
Ga0207695_109644712	3300025913	Corn Rhizosphere	MAEITDIAVYQKLSEVADELDQMAAEGASLVGVVALETAAKTVRNMASAVYQRIMADRDDEPSN
Ga0207657_106392472	3300025919	Corn Rhizosphere	MAEVSDIAVYQKLTAIADELDQMAADGASLVGDAALTTAARTVRGMASAIYQHIMN
Ga0207657_112268792	3300025919	Corn Rhizosphere	MTEVSDIAVYQKLSQVADELDHMAAEGATMVGEVALNTAAKTVRGMAGAVYQHIMSAGDEKLDS
Ga0207681_105256532	3300025923	Switchgrass Rhizosphere	MSKVSDVEVYQKLSAVADELEEMAAQGASLIGDAALTTAARTVRGMATAVYERIMAEADESVLDS
Ga0207694_102110203	3300025924	Corn Rhizosphere	MADVSDIEVYQKLTEIADDLDAMAVQGATLVGNAALTTASRTVRGMASAVYQHIMSERDASLDS
Ga0207694_107654022	3300025924	Corn Rhizosphere	MAEVSDIAVYQKLSAIADELDQMASEGASLIGDAALTTAARTVRGMASAVYQHIMNAEDESLDS
Ga0207694_111336951	3300025924	Corn Rhizosphere	MATVSDIAVYQKLTEMADELDDLAAQGAGLVGEAALQTASRTLRGMANAVYQHIMS
Ga0207694_112045561	3300025924	Corn Rhizosphere	KLTELADDLDAMAAEGASLVGEAALTTAARTVRGMATAVYQHIMSSADETLDS
Ga0207650_106133051	3300025925	Switchgrass Rhizosphere	MAEVTDIAVYQKLTELADDLDAMAAEGASLVGEAALTTAARTVRGMATAVYQHIMSSADEALDS
Ga0207687_110563592	3300025927	Miscanthus Rhizosphere	MAQVSDIAVYQKLSELADELDQLASQGASLVGETALLTAAKTVRGMASAVYQHIMSDRSEGLDS
Ga0207690_1000018018	3300025932	Corn Rhizosphere	MAEVSDIAVYQKLTAIADELDQMAADGASLVGDAALTTAARTVRGMASAIYQHIMNVEDESLDS
Ga0207686_104656902	3300025934	Miscanthus Rhizosphere	MADITDIAVYQKLTEVADELDQMAADGASMVGVVALETASKTVRGMASAVYQRIMADRDDELSN
Ga0207704_100006927	3300025938	Miscanthus Rhizosphere	MAEVTDIAVYQKLTELADDLDAMAAEGASLVGEAALTTAARTVRGMATAVYQHIMSSADETLDS
Ga0207711_1000335118	3300025941	Switchgrass Rhizosphere	MPPVTDIAVYQKLSEIADELDQMAAEGPSLVGDAALGTAARTVRGMASAVYQHIMATGDEKRDS
Ga0207711_108222182	3300025941	Switchgrass Rhizosphere	MAEVTDIAVYQKLTELADDLDAIAAQGATLVGEAALTTAARTVRGMATAVYQHIMSDADERLDS
Ga0207661_114301841	3300025944	Corn Rhizosphere	MAQVTDIAVYQKLTELADDLDAMAAEGASLVGEAALTTAARTVRGMATAVYQHIMSSADEALDS
Ga0207712_101905432	3300025961	Switchgrass Rhizosphere	MSAVTDIEVYQKLCIVADDLDAMAAEGASLIGDAALTTAARTVRGMANAVYEQIMADAGPMDS
Ga0207712_117929101	3300025961	Switchgrass Rhizosphere	MPEVSDIAVYQKLSAIADELDQMASDGASLVGDAALTTAARTVRGMASAVYQHIMNAEDESLDS
Ga0207640_120824521	3300025981	Corn Rhizosphere	MAEVSDIAVYQKLTEVADELDEMAAHGASLVGGAALTTASRTVRGMATAVYQRIMADHDTALDS
Ga0207702_103308751	3300026078	Corn Rhizosphere	MAQTSDIAVYQKLTEIADELEEMAARGASLVGDAALVTAARNARGMATAVYKHIMAESEQRLDS
Ga0207676_109664012	3300026095	Switchgrass Rhizosphere	GVSSMSAVTDIEVYQKLCIVADDLDAMAAEGASLIGDAALTTAARTVRGMANAVYEQIMSDAGPLDS
Ga0207698_124389722	3300026142	Corn Rhizosphere	MAEVSDIAVYQKLTEIADDLDAMAAQGATLVGEAALGAAGRTVRGMAQAVYQHIMATSEAPLDS
Ga0209166_1000002361	3300027857	Surface Soil	MAHTTDIAVYQKLTEIADELDEMAAQGATLVGGAALMTASRNVRGMATVVYKHIMNAADERLDS
Ga0209166_1000078714	3300027857	Surface Soil	MPMPQVSDIAVYQKLSEIADELDELARQGASLVGEAALITAGRTVRGMANAVYKRIMSDQDQDLDS
Ga0209166_106966001	3300027857	Surface Soil	KDGAMVETSDIAVYQKLTELADELDDMAARGATLVGEAALTTASRNVRGMALAVYKHIMGDRQGALDS
Ga0209974_101797362	3300027876	Arabidopsis Thaliana Rhizosphere	KPVSDIQVYQALTAIADELDQLAAEGASLVGDAALTTAARSVRGMAGAVYQHIMGRQDEALDS
Ga0268266_109718652	3300028379	Switchgrass Rhizosphere	MAEVSDIAVYQKLSAIADELDQMASEGASLVGDAALTTAARTVRGMASAVYQHIMNVQDESLDS
Ga0268264_125575881	3300028381	Switchgrass Rhizosphere	GSPRRPGAALRSAGHGGRSLVMAEVTDIAVYQRLTELADDLDAMAAEGASLVGEAALTTAARTVRGMATAVYQHIMSSADETLDS
Ga0307517_100083945	3300028786	Ectomycorrhiza	MSAVTDIEVYQKLCIVADDLDAMAAQGASLIGEAALQTAARTVRGMANAVYERIMADAGPLDS
Ga0311371_121033002	3300029951	Palsa	VSDIAVYQKLTELADELDDIAARGATLVGEAALLTAARTVRGMASAVYKHIMSDRDGALD
Ga0311372_105498801	3300030520	Palsa	MAEVSDIAVYQKLTELADELDDIAARGATLVGEAALLTAARTVRGMASAVYKHIMSDRDGALDS
Ga0311372_106534302	3300030520	Palsa	MAEVSDIAVYQKLTEIADDLDEMAAHGATLVGNAALTTAARTVRGMAGAVYQHIMSDHDQPLDS
Ga0265327_101055782	3300031251	Rhizosphere	MAETSDIAVYQKLSEMADELDEIALQGASIVGNAAVTTASRNLRGMATAVYRHIMADDETKLDS
Ga0318516_104626872	3300031543	Soil	MTEVSDIEVYQKLTEIADDLEAMAARGATLVGNAALTTAARTVRGMAGAVYQHIMAERDSGLDS
Ga0307508_104086262	3300031616	Ectomycorrhiza	MPPVTDIAVYQKLSEIADELDQMAAEGPSLVGDAALGTAARTVRGMASAVYQHIMSTGDEKRDS
Ga0307475_113929722	3300031754	Hardwood Forest Soil	LERRTMAEMTDIAVYQKLTEMADELDEVAIQGASLVGNAAVTTAARSLRGMAMAVYRHNMTDRDKLDS
Ga0318554_101583323	3300031765	Soil	MTEVSDIEVYQKLTEIADDLEAMAARGATLVGNAALTTAALTVRGMAGAVYQHIMAERDSGLDS
Ga0308175_1000132483	3300031938	Soil	MSDVSDIEVYQKLTQIADDLDAMAARGATLVGNAALTTASRTVRGMASAIYQHVMSDRDAALDS
Ga0308175_1004845322	3300031938	Soil	MSAVSDIQVYQKLCSVADDLDSMAAEGASLIGDAALTTAARTVRGMANAVYEQIMSDAGPMDS
Ga0308175_1008096242	3300031938	Soil	MAEVSDIAVYQKLTAIADELDQMAAEGASLVGDAALTTAARTVRGMASAVYQHIMNVEDESLDS
Ga0308175_1011658792	3300031938	Soil	MSDVSDIEVYQKLSEIADDLDTMAARGATLVGAAALTTAARTVRGMASAVYQHIMADRDKALNS
Ga0308175_1018507272	3300031938	Soil	MTQVTDIAVYQKLSELADELEAMAAGGATLVGEAALGTAARTVRGMATAVYQHIMSDAGETLDS
Ga0308174_100270816	3300031939	Soil	MAEVSDIAVYQKLSELADELDQMASQGASLVGGAALLTAARTVRGMASAVYQQIMSDRSETLDS
Ga0308176_109295662	3300031996	Soil	MTQVTDIAVYQKLTELADELEAMAAEGATLVGEAALGTAARTVRGMATAVYQHIMSDAGETLDS
Ga0308176_122492692	3300031996	Soil	MSAVSDIQVYQKLCIVADDLDAMAAEGASLIGDAALTTAARTVRGMANAVYEQIMSDAGPMDS
Ga0308176_128285191	3300031996	Soil	MRKRTGEALDRCLRGGAEPVGVAGMSAVTDIEVYQKLCVVADDLDVMAAQGASLIGEAALQTAARTVRGMANAVYEQIMSDAGPLDS
Ga0318513_105236302	3300032065	Soil	MTEVSDIEVYQKLTEIADDLEAMAARGATLVGNAALTTAARTVRGMAGAVYQHI
Ga0308173_107660041	3300032074	Soil	MTQVTDIAVYQKLSELADELEAMAAEGATLVGEAALGTAARTVRGMATAVYQHIMSDAGETLDS
Ga0308173_112382311	3300032074	Soil	MAEVSDIAVYQKLTAIADELDQMAAEGASLVGDAALTTAARTVRGMATAVYQHIMNVEDESLDS
Ga0307471_1001014443	3300032180	Hardwood Forest Soil	MAEVSDIAIYQKLSAIADELDQMASEGATLVGDAALSTAARTVRGMASAVYAHIMNNADETQDS
Ga0307510_1000729214	3300033180	Ectomycorrhiza	MSAVTDIEVYQTLCVVADDLDSMAARGATLIGEAALQTAARTVRGMANAVYEQIMSDAGPLDS
Ga0310811_114031262	3300033475	Soil	MSTVSDIEVYQKLSAVADELDELASQGASLIGDTALNTAARTVRGMATAVYETIMSEAQETPQAS
Ga0372943_0009446_2497_2691	3300034268	Soil	MTQVSDIAVYQKLIELADELDAMSAQGASLVGEAALSTAARTVRGMATAVYQHIMSDAGEALDS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056195

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences