Metagenome / Metatranscriptome Family F056286

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056286
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	43 residues
Representative Sequence	SVLVRLSRVTPDVLRDLLGMAHKFVTAHAARRSPSRNRRKRI
Number of Associated Samples	115
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.21 %
% of genes near scaffold ends (potentially truncated)	94.16 %
% of genes from short scaffolds (< 2000 bps)	90.51 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.241 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment (11.679 % of family members)
Environment Ontology (ENVO)	Unclassified (24.818 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.336 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 34.29% β-sheet: 0.00% Coil/Unstructured: 65.71%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00903	Glyoxalase	8.76
PF04075	F420H2_quin_red	6.57
PF08734	GYD	3.65
PF00378	ECH_1	2.92
PF00069	Pkinase	2.92
PF00072	Response_reg	1.46
PF07786	HGSNAT_cat	1.46
PF00144	Beta-lactamase	1.46
PF00239	Resolvase	1.46
PF14329	DUF4386	1.46
PF07508	Recombinase	1.46
PF13231	PMT_2	1.46
PF00106	adh_short	0.73
PF03693	ParD_antitoxin	0.73
PF02358	Trehalose_PPase	0.73
PF13637	Ank_4	0.73
PF05139	Erythro_esteras	0.73
PF12680	SnoaL_2	0.73
PF01569	PAP2	0.73
PF01951	Archease	0.73
PF01741	MscL	0.73
PF03729	DUF308	0.73
PF13620	CarboxypepD_reg	0.73
PF03544	TonB_C	0.73
PF12770	CHAT	0.73
PF13360	PQQ_2	0.73
PF02954	HTH_8	0.73
PF08327	AHSA1	0.73
PF04389	Peptidase_M28	0.73
PF03992	ABM	0.73
PF08695	Coa1	0.73
PF13671	AAA_33	0.73
PF14595	Thioredoxin_9	0.73
PF13455	MUG113	0.73
PF13229	Beta_helix	0.73
PF01066	CDP-OH_P_transf	0.73
PF13751	DDE_Tnp_1_6	0.73
PF12681	Glyoxalase_2	0.73
PF13147	Obsolete Pfam Family	0.73
PF02687	FtsX	0.73
PF07883	Cupin_2	0.73
PF00202	Aminotran_3	0.73
PF07244	POTRA	0.73
PF07690	MFS_1	0.73
PF01244	Peptidase_M19	0.73
PF03683	UPF0175	0.73
PF07366	SnoaL	0.73
PF13419	HAD_2	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	11.68
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	3.65
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	2.92
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	1.46
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	1.46
COG2367	Beta-lactamase class A	Defense mechanisms [V]	1.46
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	1.46
COG3503	Uncharacterized membrane protein, DUF1624 family	Function unknown [S]	1.46
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.73
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.73
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.73
COG1371	Archease, activates RNA ligation by RtcB (tRNA splicing)	Translation, ribosomal structure and biogenesis [J]	0.73
COG1877	Trehalose-6-phosphate phosphatase	Carbohydrate transport and metabolism [G]	0.73
COG1970	Large-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.73
COG2312	Erythromycin esterase homolog	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.73
COG2355	Zn-dependent dipeptidase, microsomal dipeptidase homolog	Posttranslational modification, protein turnover, chaperones [O]	0.73
COG2886	Predicted antitoxin, contains HTH domain	General function prediction only [R]	0.73
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.73
COG3609	Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain	Transcription [K]	0.73
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.24 %
Unclassified	root	N/A	8.76 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.24 %
Unclassified	root	N/A	8.76 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.24 %
Unclassified	root	N/A	8.76 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	52.55 %
Unclassified	root	N/A	8.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.92 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.60 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	8.76 %
Unclassified	root	N/A	8.76 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.73 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.60 %
Unclassified	root	N/A	8.76 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	7.30 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	0.73 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.73 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.60 %
Unclassified	root	N/A	8.76 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	7.30 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.73 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.73 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.60 %
Unclassified	root	N/A	8.76 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.73 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.73 %
Nitrosomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas	0.73 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.73 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.60 %
Unclassified	root	N/A	8.76 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.73 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.73 %
unclassified Nitrosomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → unclassified Nitrosomonas	0.73 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.73 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.60 %
Unclassified	root	N/A	8.76 %
Nitrosomonas sp. Is79A3	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → unclassified Nitrosomonas → Nitrosomonas sp. Is79A3	0.73 %
Edaphobacter lichenicola	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	0.73 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.73 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	0.73 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.73 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309004\|prs_FIHLEPW02S5CWQ	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300000567\|JGI12270J11330_10063922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1878	Open in IMG/M
3300001124\|JGI12692J13336_1008572	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300004152\|Ga0062386_101146389	All Organisms → cellular organisms → Bacteria → Acidobacteria	646	Open in IMG/M
3300005171\|Ga0066677_10589566	All Organisms → cellular organisms → Bacteria → Acidobacteria	632	Open in IMG/M
3300005363\|Ga0008090_15064307	All Organisms → cellular organisms → Bacteria → Acidobacteria	636	Open in IMG/M
3300005436\|Ga0070713_101685994	All Organisms → cellular organisms → Bacteria → Proteobacteria	615	Open in IMG/M
3300005436\|Ga0070713_102102043	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300005534\|Ga0070735_10202900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1212	Open in IMG/M
3300005564\|Ga0070664_101116522	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300005602\|Ga0070762_10005990	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5906	Open in IMG/M
3300005602\|Ga0070762_10774694	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	648	Open in IMG/M
3300005993\|Ga0080027_10338768	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300006052\|Ga0075029_100735281	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300006059\|Ga0075017_101678928	All Organisms → cellular organisms → Bacteria → Acidobacteria	502	Open in IMG/M
3300006086\|Ga0075019_11146193	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300006162\|Ga0075030_100175798	All Organisms → cellular organisms → Bacteria	1728	Open in IMG/M
3300006162\|Ga0075030_101132729	All Organisms → cellular organisms → Bacteria → Acidobacteria	615	Open in IMG/M
3300006162\|Ga0075030_101443968	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300009038\|Ga0099829_10542615	Not Available	966	Open in IMG/M
3300009519\|Ga0116108_1041042	All Organisms → cellular organisms → Bacteria → Acidobacteria	1495	Open in IMG/M
3300009552\|Ga0116138_1075975	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300009636\|Ga0116112_1127913	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300009698\|Ga0116216_10671527	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300009700\|Ga0116217_10357880	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	931	Open in IMG/M
3300010048\|Ga0126373_11043049	All Organisms → cellular organisms → Bacteria → Acidobacteria	883	Open in IMG/M
3300010343\|Ga0074044_10554089	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300010358\|Ga0126370_10366738	All Organisms → cellular organisms → Bacteria → Acidobacteria	1170	Open in IMG/M
3300010361\|Ga0126378_11460877	Not Available	775	Open in IMG/M
3300010371\|Ga0134125_11208295	Not Available	826	Open in IMG/M
3300010373\|Ga0134128_10466963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1408	Open in IMG/M
3300010376\|Ga0126381_103193679	Not Available	648	Open in IMG/M
3300010379\|Ga0136449_101551085	All Organisms → cellular organisms → Bacteria	1010	Open in IMG/M
3300010379\|Ga0136449_101937685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	874	Open in IMG/M
3300010379\|Ga0136449_103321023	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300011120\|Ga0150983_11535110	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300011270\|Ga0137391_10127925	All Organisms → cellular organisms → Bacteria → Acidobacteria	2207	Open in IMG/M
3300011271\|Ga0137393_10896518	All Organisms → cellular organisms → Bacteria → Acidobacteria	757	Open in IMG/M
3300012189\|Ga0137388_11490749	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300012203\|Ga0137399_10461145	All Organisms → cellular organisms → Bacteria	1063	Open in IMG/M
3300012203\|Ga0137399_10464031	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1060	Open in IMG/M
3300012363\|Ga0137390_11082302	All Organisms → cellular organisms → Bacteria → Acidobacteria	751	Open in IMG/M
3300012930\|Ga0137407_10643438	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	997	Open in IMG/M
3300014152\|Ga0181533_1124498	All Organisms → cellular organisms → Bacteria → Acidobacteria	1097	Open in IMG/M
3300014153\|Ga0181527_1135041	All Organisms → cellular organisms → Bacteria → Acidobacteria	1100	Open in IMG/M
3300014153\|Ga0181527_1268144	Not Available	683	Open in IMG/M
3300014165\|Ga0181523_10267601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	972	Open in IMG/M
3300014165\|Ga0181523_10706488	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300014491\|Ga0182014_10481354	Not Available	610	Open in IMG/M
3300014638\|Ga0181536_10375150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300014969\|Ga0157376_10848509	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	929	Open in IMG/M
3300015372\|Ga0132256_100559473	All Organisms → cellular organisms → Bacteria	1257	Open in IMG/M
3300015373\|Ga0132257_103683396	All Organisms → cellular organisms → Bacteria → Acidobacteria	558	Open in IMG/M
3300017822\|Ga0187802_10016658	All Organisms → cellular organisms → Bacteria	2473	Open in IMG/M
3300017822\|Ga0187802_10236570	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300017822\|Ga0187802_10246208	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300017823\|Ga0187818_10022628	All Organisms → cellular organisms → Bacteria	2687	Open in IMG/M
3300017926\|Ga0187807_1299224	All Organisms → cellular organisms → Bacteria → Acidobacteria	534	Open in IMG/M
3300017933\|Ga0187801_10395166	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300017935\|Ga0187848_10107630	All Organisms → cellular organisms → Bacteria → Acidobacteria	1262	Open in IMG/M
3300017938\|Ga0187854_10110964	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300017940\|Ga0187853_10059699	All Organisms → cellular organisms → Bacteria → Acidobacteria	1937	Open in IMG/M
3300017943\|Ga0187819_10170296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1292	Open in IMG/M
3300017943\|Ga0187819_10331487	All Organisms → cellular organisms → Bacteria	881	Open in IMG/M
3300017943\|Ga0187819_10788285	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300017955\|Ga0187817_10015450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4465	Open in IMG/M
3300017955\|Ga0187817_10987549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300017966\|Ga0187776_10495896	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300017995\|Ga0187816_10134128	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1068	Open in IMG/M
3300018007\|Ga0187805_10199755	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300018007\|Ga0187805_10297424	All Organisms → cellular organisms → Bacteria → Acidobacteria	742	Open in IMG/M
3300018009\|Ga0187884_10004127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10868	Open in IMG/M
3300018009\|Ga0187884_10088474	All Organisms → cellular organisms → Bacteria	1368	Open in IMG/M
3300018012\|Ga0187810_10217650	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	779	Open in IMG/M
3300018012\|Ga0187810_10272922	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300018037\|Ga0187883_10625662	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300018042\|Ga0187871_10299178	All Organisms → cellular organisms → Bacteria	891	Open in IMG/M
3300018043\|Ga0187887_10732730	All Organisms → cellular organisms → Bacteria → Acidobacteria	584	Open in IMG/M
3300018062\|Ga0187784_10333932	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1229	Open in IMG/M
3300018062\|Ga0187784_10573985	All Organisms → cellular organisms → Bacteria → Acidobacteria	907	Open in IMG/M
3300018086\|Ga0187769_10216842	All Organisms → cellular organisms → Bacteria → Acidobacteria	1419	Open in IMG/M
3300018088\|Ga0187771_11078990	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	681	Open in IMG/M
3300018090\|Ga0187770_10305381	All Organisms → cellular organisms → Bacteria → Proteobacteria	1239	Open in IMG/M
3300020579\|Ga0210407_10359857	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1138	Open in IMG/M
3300020580\|Ga0210403_10027061	All Organisms → cellular organisms → Bacteria	4571	Open in IMG/M
3300020581\|Ga0210399_10773537	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300021171\|Ga0210405_11156822	All Organisms → cellular organisms → Bacteria → Acidobacteria	575	Open in IMG/M
3300021178\|Ga0210408_10428139	Not Available	1054	Open in IMG/M
3300021181\|Ga0210388_10103193	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2443	Open in IMG/M
3300021402\|Ga0210385_11340046	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300021404\|Ga0210389_10188604	All Organisms → cellular organisms → Bacteria	1606	Open in IMG/M
3300021479\|Ga0210410_11341066	All Organisms → cellular organisms → Bacteria	608	Open in IMG/M
3300021560\|Ga0126371_11501413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	802	Open in IMG/M
3300021560\|Ga0126371_12687369	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300022508\|Ga0222728_1026459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosomonas → unclassified Nitrosomonas → Nitrosomonas sp. Is79A3	873	Open in IMG/M
3300022731\|Ga0224563_1000400	All Organisms → cellular organisms → Bacteria	1834	Open in IMG/M
3300022734\|Ga0224571_114978	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300025414\|Ga0208935_1047245	All Organisms → cellular organisms → Bacteria	575	Open in IMG/M
3300025454\|Ga0208039_1036385	All Organisms → cellular organisms → Bacteria	948	Open in IMG/M
3300025506\|Ga0208937_1047789	Not Available	1010	Open in IMG/M
3300025509\|Ga0208848_1037245	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter lichenicola	1053	Open in IMG/M
3300025928\|Ga0207700_11204261	Not Available	676	Open in IMG/M
3300025945\|Ga0207679_11050351	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300027590\|Ga0209116_1039464	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300027645\|Ga0209117_1003234	All Organisms → cellular organisms → Bacteria	5677	Open in IMG/M
3300027867\|Ga0209167_10288092	All Organisms → cellular organisms → Bacteria → Acidobacteria	886	Open in IMG/M
3300027879\|Ga0209169_10149921	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300027908\|Ga0209006_10440921	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1092	Open in IMG/M
3300029915\|Ga0311358_10731063	All Organisms → cellular organisms → Bacteria → Acidobacteria	721	Open in IMG/M
3300029939\|Ga0311328_10267219	All Organisms → cellular organisms → Bacteria → Acidobacteria	1282	Open in IMG/M
3300029939\|Ga0311328_10455704	All Organisms → cellular organisms → Bacteria	907	Open in IMG/M
3300029943\|Ga0311340_10589107	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300029953\|Ga0311343_10752746	All Organisms → cellular organisms → Bacteria	803	Open in IMG/M
3300030042\|Ga0302300_1083718	All Organisms → cellular organisms → Bacteria	975	Open in IMG/M
3300030053\|Ga0302177_10662819	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300030580\|Ga0311355_11536984	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	574	Open in IMG/M
3300031231\|Ga0170824_124340101	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300031446\|Ga0170820_15420176	Not Available	951	Open in IMG/M
3300031525\|Ga0302326_13072709	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300031718\|Ga0307474_10745257	All Organisms → cellular organisms → Bacteria → Acidobacteria	774	Open in IMG/M
3300031754\|Ga0307475_10107815	All Organisms → cellular organisms → Bacteria	2181	Open in IMG/M
3300031754\|Ga0307475_10454359	All Organisms → cellular organisms → Bacteria → Acidobacteria	1029	Open in IMG/M
3300031954\|Ga0306926_12396340	All Organisms → cellular organisms → Bacteria → Acidobacteria	582	Open in IMG/M
3300032076\|Ga0306924_10653692	All Organisms → cellular organisms → Bacteria	1185	Open in IMG/M
3300032160\|Ga0311301_10447984	Not Available	1946	Open in IMG/M
3300032180\|Ga0307471_100321866	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1644	Open in IMG/M
3300032205\|Ga0307472_101229118	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300032783\|Ga0335079_10627616	All Organisms → cellular organisms → Bacteria	1131	Open in IMG/M
3300032828\|Ga0335080_10697914	All Organisms → cellular organisms → Bacteria → Acidobacteria	1058	Open in IMG/M
3300032829\|Ga0335070_11456760	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300032892\|Ga0335081_10331402	All Organisms → cellular organisms → Bacteria	1995	Open in IMG/M
3300033289\|Ga0310914_11156199	All Organisms → cellular organisms → Bacteria → Acidobacteria	675	Open in IMG/M
3300033402\|Ga0326728_10178863	All Organisms → cellular organisms → Bacteria → Acidobacteria	2200	Open in IMG/M
3300033755\|Ga0371489_0104470	All Organisms → cellular organisms → Bacteria → Acidobacteria	1645	Open in IMG/M
3300033977\|Ga0314861_0036914	All Organisms → cellular organisms → Bacteria	2843	Open in IMG/M
3300033977\|Ga0314861_0506060	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.62%
Host-Associated	Host-Associated	4.38%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.23%
Aquatic	Environmental → Aquatic	31.39%
Plants	Host-Associated → Plants	4.38%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.20%
Freshwater	Environmental → Aquatic → Freshwater	27.01%
Peat	Environmental → Terrestrial → Peat	8.03%
Sediment	Environmental → Aquatic → Sediment	4.38%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	27.01%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	10.95%
Loam	Environmental → Terrestrial → Soil → Loam	8.76%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.03%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	18.98%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.33%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	11.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.49%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.84%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	4.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.19%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.46%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.46%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	11.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.76%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.84%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	5.11%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	4.38%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	4.38%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	4.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.38%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.38%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.65%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	3.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.92%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.92%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.19%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.46%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.46%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.46%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.46%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.73%
Green-Waste Compost	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost	0.73%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.73%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.73%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.73%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309004	Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto Rico	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001124	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_O3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009519	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_150	Environmental	Open in IMG/M
3300009552	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022508	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022731	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4	Environmental	Open in IMG/M
3300022734	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZU3	Host-Associated	Open in IMG/M
3300025414	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_10 (SPAdes)	Environmental	Open in IMG/M
3300025454	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_150 (SPAdes)	Environmental	Open in IMG/M
3300025506	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_40 (SPAdes)	Environmental	Open in IMG/M
3300025509	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027590	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O1 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029943	I_Palsa_N3 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300030042	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E1_1	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033755	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB26FY SIP fraction	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
prs_01797190	2070309004	Green-Waste Compost	VGNAVLVRLSRVNPDVLRDLLGTAYKYVTRNAARSPARKCS
JGI12270J11330_100639223	3300000567	Peatlands Soil	RLSRITPNVLRDLLGMAHKFVTAHKARRLPSRSRRKPV*
JGI12692J13336_10085721	3300001124	Forest Soil	GYSAVLVRLSRVTPDVLRDLLGMAHKFVTAHAPRRLPSRNRRKPV*
Ga0062386_1011463892	3300004152	Bog Forest Soil	SAVLVRLSRVNPDALRDLLGMAYKFVTRKTEPRSPARKRR*
Ga0066677_105895661	3300005171	Soil	YSAVLVRLSCVNPDVLRDLLGMAYKFVTRNPAPRSPARKRRK*
Ga0008090_150643071	3300005363	Tropical Rainforest Soil	LVRLSKVNPNALRDLLGMAYKFVTRKAASPSLARRHRRSP*
Ga0070713_1016859941	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	YNVVLVRLSRVKRDVLRDLLGMAHKFVSRNVGPRPPARKPR*
Ga0070713_1021020432	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VGYTAVLVRMSRVAPDVLRDLLGMAHKFVAAPAPRRTPSRKRRKPV*
Ga0070735_102029002	3300005534	Surface Soil	VTDHYLGYTAVLVRLSRVTPDVLRDLLGMAHKFVTGDKERRSPSRNRRIYHQP*
Ga0070664_1011165221	3300005564	Corn Rhizosphere	VLVRLSKVNPNVLRDLLGMAYKFVTRKSAPRPRSRKTRIG*
Ga0070762_100059906	3300005602	Soil	VTAHYLNYSALLVRLSRVTPDILRDLLGMAHKFVTADGARRSPSRSRRKPV*
Ga0070762_107746941	3300005602	Soil	VTDHSLGYTTVLARLSRVTPDVLRDLLGKAHKFVTADAARRSPSRNRRK
Ga0080027_103387682	3300005993	Prmafrost Soil	VTPDVLRDLLSMAHKFVTADAVRRSPSRNKRKRI*
Ga0075029_1007352811	3300006052	Watersheds	VRLSRVTPDVLKDLLGMAHKFVTAETARRSPTRHRRKPA*
Ga0075017_1016789282	3300006059	Watersheds	SCVNPDVLRDLLRMAYKFVTRNPAPRSPARKRGK*
Ga0075019_111461931	3300006086	Watersheds	SRVTPDVLRDLLGMAHKFVTAHEARRSLSRNRRKPV*
Ga0075030_1001757984	3300006162	Watersheds	RVTPDVLRDLLGMAHKFVTADTARRSPSRNKRKPV*
Ga0075030_1011327291	3300006162	Watersheds	HYAGYSAVLVRLARVNPDALRDLLGMAHKFVTRKPAPRKPARKRKGR*
Ga0075030_1014439681	3300006162	Watersheds	SVLVRLSRVTPDVLRDLLGMAHKFVTADAARRSTSRHRKPGRNADSGC*
Ga0099829_105426151	3300009038	Vadose Zone Soil	YVGYNAVLVRLSRVNRDVLRGLLGMAYKFVTRGAAPRSPARKRRKLRPRT*
Ga0116108_10410423	3300009519	Peatland	MSRIAPDVLRDLLGLAHKFVTADAARRSPSRNKRKRI*
Ga0116138_10759753	3300009552	Peatland	SRIAPDVLRDLLGLAHKFVTADAARRSPSRNKRKRI*
Ga0116112_11279131	3300009636	Peatland	RLSRVTPDVLRDLLGMAHKFVTADTARRSPSRNKRKRI*
Ga0116216_106715272	3300009698	Peatlands Soil	VRLSRVNLDVLRDLLGMAHKFVTRRAAPRSPARNRRKLGPRK*
Ga0116217_103578802	3300009700	Peatlands Soil	ADYSGVLVRLSRVNPNVLRDLLGMAYKFVTANIAPRSPSRKRRKVGPGK*
Ga0126373_110430491	3300010048	Tropical Forest Soil	TFVLVRLSRVTPDVLRDLLGMAHKFVTAHEARRSASRKKRKRI*
Ga0074044_105540892	3300010343	Bog Forest Soil	LVRLSRVNPGLLRDLLGMAYKFVTASVAPSRKRRKLRPRKGM*
Ga0126370_103667381	3300010358	Tropical Forest Soil	AVLVRLSRVNPDVLRDLLGMAYKFVTRNASRRWPSQKRR*
Ga0126378_114608771	3300010361	Tropical Forest Soil	HVLQDLLGMAHQFVTRNAAPRSPARKRRKVDSRK*
Ga0134125_112082952	3300010371	Terrestrial Soil	SVVSVNPNVSRDLLGMAYKFVTRKSTPRPPARNRR*
Ga0134128_104669631	3300010373	Terrestrial Soil	VRLSRIEEGVLRDLLGMAYKFVTSKGKRGTSGSSSPKSKKTTQKK*
Ga0126381_1031936791	3300010376	Tropical Forest Soil	GYSAVLVRLSRVNSHVLQDLLGMAHQFVTRNAAPVR*
Ga0136449_1015510851	3300010379	Peatlands Soil	VRLSRVNLDVVRDLLGMAHKFVTRNAAPHSPARKRRKLGPRK*
Ga0136449_1019376853	3300010379	Peatlands Soil	VRLSRVNPDALRDLLGMAYKFVTRKAAPRSPARKRR*
Ga0136449_1033210231	3300010379	Peatlands Soil	DHYLNYSAVLVRLSRVTPDVLRDLLGMAHKFVTSHEARRSPSRSRRKPV*
Ga0150983_115351103	3300011120	Forest Soil	GYNAVLVRLSRVHRDVLRDLLGMAYKFVTRKAAPRSPARKP*
Ga0137391_101279253	3300011270	Vadose Zone Soil	SVLVRLSRLDRDVLRDLLGMAYKFMTRKAAPRSPARKR*
Ga0137393_108965181	3300011271	Vadose Zone Soil	HYIGYESVLVRLSRVNPDVLRDLLGMAYKFVTRKAAARSPAQKLRKLGPRTWTRV*
Ga0137388_114907492	3300012189	Vadose Zone Soil	VRLSCVNPDVLRDLLGMAYKFVTRKPAPRSPTRKRGK*
Ga0137399_104611451	3300012203	Vadose Zone Soil	YVTEHYVGYSSVLVRLSRVTPDVLGGLLRMAHKFVTRNAAPRSPAGKRRKLAPRK*
Ga0137399_104640311	3300012203	Vadose Zone Soil	HYVGYNAVLVRLSRVTPDVLRDLLGMAHKFVTRNAAARPPARKRRKLGPGERTKV*
Ga0137390_110823022	3300012363	Vadose Zone Soil	SRVNRDVLRDLLGMAYKFVTRGAAPHSPGRKGRKPRPEK*
Ga0137407_106434381	3300012930	Vadose Zone Soil	GYSAVLVRLSCANPDVLRDLLRMAYKFVTRKPAPRSPARKRGK*
Ga0181533_11244982	3300014152	Bog	RLSRVNPDVLRDLLGMAYKFVTRNAAPHSPVRKRRKLGPRK*
Ga0181527_11350411	3300014153	Bog	SRVNRDVLRDLLGMAYKFVTRNAAPHSPVRKRRKLGPRK*
Ga0181527_12681441	3300014153	Bog	VGYSAVLVRLSRVNREVLLDLLGMAYKFVTANSPSRPTSRKRRKTGPEGR*
Ga0181523_102676012	3300014165	Bog	YTAVLVRLSRVNSDVLRDLLGMAHKFVTRNAAPRSPAGKRRKLGARK*
Ga0181523_107064882	3300014165	Bog	LVRLSRVTPDVLRDLLGMAHKFVTADTARRSPSRNKRKRI*
Ga0182014_104813541	3300014491	Bog	VNPDVLRDLLGMAYKFVTGGKVNRSPRQKRQKLPPAGRP*
Ga0181536_103751501	3300014638	Bog	GYNAVLVRLSRVNRDVLRDLLGMAYKFVTRNAAPHSPVRKRRKLGPRK*
Ga0157376_108485091	3300014969	Miscanthus Rhizosphere	AVLVRLSKVNPNVLRDLLGMAYKFVTRKSAPRPRSRKTRIG*
Ga0132256_1005594731	3300015372	Arabidopsis Rhizosphere	YADYNAVPVRLSRVNSNMLQDLLGMAHKSVTRNAAPRSPARKRR*
Ga0132257_1036833962	3300015373	Arabidopsis Rhizosphere	VYYVTDHYVGNAVLVRLSHVNPDVLRDLLSMAHKFVTKAAPRSPARKRH*
Ga0187802_100166581	3300017822	Freshwater Sediment	LNDTSVLVRLSRVTPAVLRDLLGMAHKFVTAHEARRSPSRNRRKPV
Ga0187802_102365702	3300017822	Freshwater Sediment	SAVLVRLSRITPDVLRDLLGMAHKFVTADAARRSPSRNKRKRI
Ga0187802_102462081	3300017822	Freshwater Sediment	HYLNYSAVLVRLSRVTPDVLKDLLGMAHKFVTAHEARRSPSRSRRKAL
Ga0187818_100226281	3300017823	Freshwater Sediment	DHYLNYTSVLVRLSRVTPDVLRDLLGMAHKFVTADTPRRSLSRYKRKRI
Ga0187807_12992241	3300017926	Freshwater Sediment	DAVLVRLSRVNPAVLRDLLGMAYKFMTANAAPRPSRKRRNPGR
Ga0187801_103951662	3300017933	Freshwater Sediment	VGYTAVLVRLSRVNADVLRDLLGMAHKFVTRGGARQPKAPKGRKSGPRK
Ga0187848_101076304	3300017935	Peatland	YYVTDHYLNYSAVLVRMSRVTPDVLRDLLCMAHKFVTAHEPRRSPSRNRRRRV
Ga0187854_101109642	3300017938	Peatland	LVRLSRVTPDILRDLLGMAHKFVTAQETRRPPNRNRRKPV
Ga0187853_100596991	3300017940	Peatland	NYSAVLVRMSRVTPDVLRDLLCMAHKFVTAHEPRRSPSRNRRRRV
Ga0187819_101702963	3300017943	Freshwater Sediment	HYLNYNAVLVRLSRVTPDVLRDLLGMAHKFVTSHESRRSPSRNRRKAL
Ga0187819_103314872	3300017943	Freshwater Sediment	GYSAVLVRLSRVNPDVLRDVLGMAHKFVTRKVAPRSPARKRR
Ga0187819_107882851	3300017943	Freshwater Sediment	RLSRVTPDVLRDLLGMAHKFVTAHAPRRSPSRSRRKPV
Ga0187817_100154501	3300017955	Freshwater Sediment	NPEVLRGLLGMAYKFVTRAAVSRSSARKRRKLGPRK
Ga0187817_109875491	3300017955	Freshwater Sediment	RITPNVLRDLIGMAHKFVTADAARRSPSRNKRKPV
Ga0187776_104958963	3300017966	Tropical Peatland	LVRLSRVNRDVLRDLLGMAYKFVTSKTHRSPSRKRRDSAL
Ga0187816_101341283	3300017995	Freshwater Sediment	SVLVRLSRVTPDVLRDLLGMAHKFVTAHAARRSPSRNRRKRI
Ga0187805_101997552	3300018007	Freshwater Sediment	SRVTPDVLRDLLGMAHKFVTADAARRSPSRSRRKRT
Ga0187805_102974242	3300018007	Freshwater Sediment	RLSRVTPDVLRDLLGMAHKFVTAHAARRSPSRNRRKRI
Ga0187884_1000412711	3300018009	Peatland	VTDHYLNYTSVLLSLSRVTPDVPRDLLGMAHKFVTAHDARRSPSRNRRKRT
Ga0187884_100884742	3300018009	Peatland	MSRIAPDVLRDLLGLAHKFVTADAARRSPSRNKRKRI
Ga0187810_102176502	3300018012	Freshwater Sediment	AYNSVLVRMARVTPDVLRDLLGMAYKFVTQKARLRSAARKRRMQ
Ga0187810_102729221	3300018012	Freshwater Sediment	NYNAVLVRLSRVTPDVLRDLLGMAHKFVTTHGARRLPSGNRRKRA
Ga0187883_106256622	3300018037	Peatland	YLNYSAVLVRMSRVTPDVLRDLLGMAHKFVTADAARRSPSRNKRKRI
Ga0187871_102991781	3300018042	Peatland	NPDVLRDLLGMAYKFVTRSAKPPSPARKRKKARAGK
Ga0187887_107327301	3300018043	Peatland	YSAVLVRLSRVNPDVLRDLLGMAYTFVTRNAKPPSPSRKRQKTGARK
Ga0187784_103339324	3300018062	Tropical Peatland	HYVGYTAVLVRMSSVTPDVLRDLLGMAHKFVTAPETRPSPSRKRRESA
Ga0187784_105739851	3300018062	Tropical Peatland	YVDYSAVLVRLSRVTPDVLRDLLGMAHKFVTADKARRLASRKKRKRI
Ga0187769_102168424	3300018086	Tropical Peatland	SVLVRLSRVTPDVLRDLLGMAHKFVTSHEARRSPARNRRRRV
Ga0187771_110789901	3300018088	Tropical Peatland	AVLVRLARVTPDVLRDLLGMAHKFVTAHEARRSPSGKRRKPA
Ga0187770_103053814	3300018090	Tropical Peatland	RVTPDVLRDLLGMAHKFVAADTSRRSQSRNRRKHT
Ga0210407_103598573	3300020579	Soil	VGYNAVLVRLSRVHRDVLRDLLGMAYKFVTRKAAPRSPARKP
Ga0210403_100270611	3300020580	Soil	VTDHYLNHTSVLVRLSRVTPDVLRDLLGMAHKFVTADAARHSPP
Ga0210399_107735371	3300020581	Soil	HYLNYTAVLVRLSRVKPEVLRDLLGMAHKFLTAAARRPTSRHHRKRV
Ga0210405_111568221	3300021171	Soil	VNHDVLRDLLGMAYKFVTRNATRQSPARRRRHQRTTK
Ga0210408_104281392	3300021178	Soil	YAGYNAVLVRLSRINSNVLQDLLGMAHKFVTRNAAPRSPARKRRKVGSRK
Ga0210388_101031936	3300021181	Soil	VTDHYLGYNAVLVRLSRVTPDVLRDLLSMAHKFVTALDARRSPSRSRRKPV
Ga0210385_113400461	3300021402	Soil	RLSCVTSDVLRDVLGTAYKFVMEHEARRSPSRNRRKPV
Ga0210389_101886041	3300021404	Soil	DYLNYSTVLVRLSRVTPDVLRDLLGMAHKFVTAHEARRSPSRNRRKPA
Ga0210391_109996993	3300021433	Soil	NAVLVRLSRVKPDVLRDLLGMAHKFVTRKPRKPVRK
Ga0210410_113410661	3300021479	Soil	AVLVRLSRITPDVLRDLLGMAHKFVTADAARRSPSRNKRKPV
Ga0126371_115014133	3300021560	Tropical Forest Soil	LSRVTPDVLRDLLGMAHKFVTAHEARRSASRKKRKRI
Ga0126371_126873691	3300021560	Tropical Forest Soil	YTSVLVRLSRVTPDVLRDLLGMAHKFVTQRLPSKKRRKKMKD
Ga0222728_10264593	3300022508	Soil	GVLVRLARVTPDVLRDLLGMAYKFVTASVKPRAPARKSRKPGSGK
Ga0224563_10004005	3300022731	Soil	IYYVTDHSLGYTTVLARLSRVTPDVLRDLLGKAHKFVTADAARRSPSRNRRKPV
Ga0224571_1149781	3300022734	Rhizosphere	SAGAAVPDIYYVTDHSLGYTTVLARLSRVTPDVLRDLLGKAHKFVTADAARRSPSRNRRKPV
Ga0208935_10472451	3300025414	Peatland	YSAVLVRMSRLTPDVLRDLLGMAHKFVTADVARRLPSQNKRTRI
Ga0208039_10363851	3300025454	Peatland	SRIAPDVLRDLLGLAHKFVTADAARRSPSRNKRKRI
Ga0208937_10477893	3300025506	Peatland	LVRLSRVNTGVLRDLLGMAYKYVTANSAGRSPSRKRRKPGIGN
Ga0208848_10372451	3300025509	Arctic Peat Soil	GCNSVLVRLSRVNLDVLRDLLGMAHKFVTRNAEPRSPAWRRRKLGPRK
Ga0207700_112042611	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	INSNVLQDLLGMAHKFVTRNAAPRSPARKHRKVGSRK
Ga0207679_110503511	3300025945	Corn Rhizosphere	VLVRLSKVNPNVLRDLLGMAYKFVTRKSAPRPRSRKTRIG
Ga0209116_10394644	3300027590	Forest Soil	SRVTPDVLRDLLGMAHKFVTASDVGRSSSRNRRKPV
Ga0209117_10032341	3300027645	Forest Soil	GYNAVLVRLSRVHRDVLRDLLGMAYKFVTRKAARRSPARKR
Ga0209167_102880921	3300027867	Surface Soil	VLSSFHHRQRSHYVGYSAVLVRLARVNADVLRDLLGMAYKFVTRSTAPRSPARKLRKLRSGE
Ga0209169_101499213	3300027879	Soil	SRVTPDVLRDLLGMAHKFVTADAARPSPSRNRRKPV
Ga0209006_104409212	3300027908	Forest Soil	YVGHTSVLVRLSRVNPDALRDLLGMAHKFVTRKAVSRSPARKRRKLGPRK
Ga0311358_107310632	3300029915	Bog	YAGYNFVLVRLSRVSADELRDLLGMAYKFLTRKAVPQSPVRKRRGTGNSK
Ga0311328_102672193	3300029939	Bog	SHVTHDVLRDLLGMAHKFVTADAARRSPSRNKRKPV
Ga0311328_104557043	3300029939	Bog	TDHYLNYSAVLVRMSRLTPDVLRDLLGMAHKFVTADVARRLPSQNKRTRI
Ga0311340_105891072	3300029943	Palsa	VNPEVLQDLLGVAYKFVIRSAAPRSLARKSRKRAPGK
Ga0311343_107527461	3300029953	Bog	LSRVTPDVLRDLLGMAHKFVTASDAGRSSSRNRRKPV
Ga0302300_10837183	3300030042	Palsa	SRVTPDVLRDLLGMAHKFVTADAARRSPSRNRRKPV
Ga0302177_106628192	3300030053	Palsa	VLVRLSRVNPEVLRDLLGVAYKFVTRTAAPRSPSRKLRKRAPGK
Ga0311355_115369842	3300030580	Palsa	HYEGFDAVLVRLARVTPDVLRDLLSMAYKYVGRNTGRKPAVGKRRKPAGRA
Ga0170824_1243401012	3300031231	Forest Soil	AVLVRLSRINSNVLRDLLGMAYKFVTRKSAPRPRVRKPR
Ga0170820_154201761	3300031446	Forest Soil	VTDHYAGYNAVLVRLSRVNSNVLQDLLGMAHKLVTRNSAPRSPARKRR
Ga0302326_130727092	3300031525	Palsa	TDHYAPHNVVLVRLPRVKRDVLRDLLGMAHKFVTRRVEPRPPARKRR
Ga0307474_107452572	3300031718	Hardwood Forest Soil	YLNYTAVPVRLSRVTPDVLRDLLGMAHKFVTSHEARRSPSRSPRKHV
Ga0307475_101078151	3300031754	Hardwood Forest Soil	TAVLVRLSRVTPDVLRDLLGLAQKFVTAHAARRSPSRNRRKPV
Ga0307475_104543592	3300031754	Hardwood Forest Soil	YVGYSAVLVRLSCVNPDVLRDLLGMAYKFVTRKPAPRSPARKRGK
Ga0306926_123963402	3300031954	Soil	AVLVRLSRVTPDVLRDLLGMAHKFVIADKARGSPTRKRGKRI
Ga0306924_106536923	3300032076	Soil	GVLVRLSRVTPNVLRELLGMAHKFVTAHAAPRSPSRHRRKPV
Ga0311301_104479841	3300032160	Peatlands Soil	VRLSRVNPDALRDLLGMAYKFVTRKAAPRSPARKRR
Ga0307471_1003218661	3300032180	Hardwood Forest Soil	GYSAVLVRLSCVNPDVLRDLLGMAYKFVTRKPAPRSAARKRGK
Ga0307472_1012291182	3300032205	Hardwood Forest Soil	DHYVGYSAVLVRLSCVNPDVLRDLLGMAYKFVTRKPAPRSAARKRGK
Ga0335079_106276163	3300032783	Soil	LVRMSRIGPDELRDLLGMAYKFVTRKGPRRAAPRRRRSREGKPARS
Ga0335080_106979142	3300032828	Soil	HYVGYSAVLVRLTRVTPDVLRDLLGMAHKFVTAKLAHPSPSKKRPRR
Ga0335070_114567602	3300032829	Soil	AVLVRLGRINADALRDLLGMAHKFVTRKAAKPPARKRR
Ga0335081_103314024	3300032892	Soil	YLDYSAVLVRLSRTTTNVLRGLLGMAHKFVTADAARRSPSRHRRKPA
Ga0310914_111561991	3300033289	Soil	VGNAVLVRLSRVNPGVLRDLLGMAYKFVTRNAARRSPSRKRR
Ga0326728_101788633	3300033402	Peat Soil	NRDVLRDLLGMAYKFVTRNAAPHSPVRKRRKLGPRK
Ga0371489_0104470_1494_1643	3300033755	Peat Soil	MDYNGVLVRLSRVSPEVLRDLLGMAYKFVTSNVGPRSSSRKRRKRGPRR
Ga0314861_0036914_117_251	3300033977	Peatland	MLVRLSRVSPGVLRDLLGMAYKFVTSKAGSRSSSRKRKKLGLGR
Ga0314861_0506060_2_145	3300033977	Peatland	YNAVLVRLSRVSPDVLRDLLVMAYKFVTAKAGSRSSSRKRRKLRPRI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056286

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences