Metagenome Family F056443

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056443
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	54 residues
Representative Sequence	VVECPDGKYFGSIRAPGPVYDYVLEFLKRNHGRKLREVMDAEIDISDVIQ
Number of Associated Samples	83
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	15.60 %
% of genes near scaffold ends (potentially truncated)	52.55 %
% of genes from short scaffolds (< 2000 bps)	68.61 %
Associated GOLD sequencing projects	77
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (66.423 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (34.307 % of family members)
Environment Ontology (ENVO)	Unclassified (29.197 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (54.015 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.08% β-sheet: 5.13% Coil/Unstructured: 71.79%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF04392	ABC_sub_bind	4.38
PF13676	TIR_2	4.38
PF02586	SRAP	2.92
PF13488	Gly-zipper_Omp	1.46
PF00903	Glyoxalase	1.46
PF04831	Popeye	1.46
PF07883	Cupin_2	1.46
PF00072	Response_reg	0.73
PF06210	DUF1003	0.73
PF09912	DUF2141	0.73
PF13592	HTH_33	0.73
PF11790	Glyco_hydro_cc	0.73
PF01209	Ubie_methyltran	0.73
PF13476	AAA_23	0.73
PF01717	Meth_synt_2	0.73
PF06305	LapA_dom	0.73
PF13289	SIR2_2	0.73
PF02735	Ku	0.73
PF12681	Glyoxalase_2	0.73
PF10282	Lactonase	0.73
PF05036	SPOR	0.73
PF10899	AbiGi	0.73
PF04326	AlbA_2	0.73
PF00329	Complex1_30kDa	0.73
PF07508	Recombinase	0.73
PF02416	TatA_B_E	0.73
PF01068	DNA_ligase_A_M	0.73
PF00326	Peptidase_S9	0.73
PF01844	HNH	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	4.38
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	2.92
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.73
COG0852	NADH:ubiquinone oxidoreductase 27 kD subunit (chain C)	Energy production and conversion [C]	0.73
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	0.73
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.73
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.73
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.73
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.73
COG2226	Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG	Coenzyme transport and metabolism [H]	0.73
COG2227	2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase	Coenzyme transport and metabolism [H]	0.73
COG2865	Predicted transcriptional regulator, contains HTH domain	Transcription [K]	0.73
COG3262	Ni,Fe-hydrogenase III component G	Energy production and conversion [C]	0.73
COG3771	Lipopolysaccharide assembly protein YciS/LapA, DUF1049 family	Cell wall/membrane/envelope biogenesis [M]	0.73
COG4420	Uncharacterized membrane protein	Function unknown [S]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.15 %
Unclassified	root	N/A	32.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.42 %
Unclassified	root	N/A	32.85 %
Viruses	superkingdom	All Organisms → Viruses	0.73 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.42 %
Unclassified	root	N/A	32.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.85 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	32.12 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	10.22 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.46 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	1.46 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	1.46 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.85 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	32.12 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	5.11 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.46 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.46 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	1.46 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.46 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.46 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.85 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	32.12 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	5.11 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	1.46 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1.46 %
Cellvibrionales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales	1.46 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.46 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.46 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.73 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	32.12 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	5.11 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	1.46 %
Candidatus Methylomirabilis	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis	1.46 %
Cellvibrionaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae	1.46 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.46 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.46 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	32.12 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5.11 %
Candidatus Methylomirabilis limnetica	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis → Candidatus Methylomirabilis limnetica	1.46 %
Nitrospira	genus	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira	1.46 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.46 %
Teredinibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Teredinibacter	1.46 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.46 %
Polaromonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas	0.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	32.12 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5.11 %
Teredinibacter haidensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Teredinibacter → Teredinibacter haidensis	1.46 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	1.46 %
Candidatus Methylomirabilis limnetica	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis → Candidatus Methylomirabilis limnetica	1.46 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.46 %
unclassified Nitrospira	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira	0.73 %
Candidatus Nitrospira kreftii	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira kreftii	0.73 %
Polaromonas jejuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → Polaromonas jejuensis	0.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.85 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	32.12 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	5.11 %
Bradyrhizobium sp. AUGA SZCCT0283	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1.46 %
Teredinibacter haidensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Teredinibacter → Teredinibacter haidensis	1.46 %
Candidatus Methylomirabilis limnetica	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis → Candidatus Methylomirabilis limnetica	1.46 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1.46 %
Nitrospira sp.	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	0.73 %
Candidatus Nitrospira kreftii	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira kreftii	0.73 %
Polaromonas jejuensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → Polaromonas jejuensis	0.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2240194	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	749	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1098048	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300000955\|JGI1027J12803_100964014	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	559	Open in IMG/M
3300004052\|Ga0055490_10177581	Not Available	636	Open in IMG/M
3300004052\|Ga0055490_10186518	Not Available	623	Open in IMG/M
3300005294\|Ga0065705_10162830	Not Available	1771	Open in IMG/M
3300005294\|Ga0065705_10633368	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	687	Open in IMG/M
3300005294\|Ga0065705_10945751	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300005332\|Ga0066388_104429953	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300005332\|Ga0066388_107216643	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300005332\|Ga0066388_107370483	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300005445\|Ga0070708_100057803	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3455	Open in IMG/M
3300005468\|Ga0070707_100274516	All Organisms → cellular organisms → Bacteria → Proteobacteria	1639	Open in IMG/M
3300005468\|Ga0070707_100962477	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	819	Open in IMG/M
3300005468\|Ga0070707_101580251	Not Available	623	Open in IMG/M
3300005518\|Ga0070699_102100154	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300005554\|Ga0066661_10848903	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	534	Open in IMG/M
3300005557\|Ga0066704_10864497	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	560	Open in IMG/M
3300005559\|Ga0066700_10217288	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → unclassified Nitrospira → Nitrospira sp.	1326	Open in IMG/M
3300005559\|Ga0066700_10388066	Not Available	985	Open in IMG/M
3300005559\|Ga0066700_10850542	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300005713\|Ga0066905_101285989	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	657	Open in IMG/M
3300005713\|Ga0066905_102237249	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	510	Open in IMG/M
3300005764\|Ga0066903_102539306	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	992	Open in IMG/M
3300005764\|Ga0066903_104453567	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300005937\|Ga0081455_10000077	All Organisms → cellular organisms → Bacteria	105276	Open in IMG/M
3300006049\|Ga0075417_10119022	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1211	Open in IMG/M
3300006049\|Ga0075417_10191307	Not Available	966	Open in IMG/M
3300006049\|Ga0075417_10551872	Not Available	583	Open in IMG/M
3300006058\|Ga0075432_10575580	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	512	Open in IMG/M
3300006797\|Ga0066659_11490060	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	566	Open in IMG/M
3300006844\|Ga0075428_100124295	All Organisms → cellular organisms → Bacteria	2808	Open in IMG/M
3300006844\|Ga0075428_101055474	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	859	Open in IMG/M
3300006845\|Ga0075421_100195979	All Organisms → cellular organisms → Bacteria	2503	Open in IMG/M
3300006845\|Ga0075421_100386963	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1682	Open in IMG/M
3300006845\|Ga0075421_101571988	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300006847\|Ga0075431_102019229	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300006852\|Ga0075433_10070007	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3082	Open in IMG/M
3300006852\|Ga0075433_10636390	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	935	Open in IMG/M
3300006852\|Ga0075433_10789200	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300006852\|Ga0075433_11727209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	539	Open in IMG/M
3300006853\|Ga0075420_100350615	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1277	Open in IMG/M
3300006853\|Ga0075420_100449984	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis → Candidatus Methylomirabilis limnetica	1112	Open in IMG/M
3300006854\|Ga0075425_102985212	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300006871\|Ga0075434_102562917	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300006880\|Ga0075429_100981865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Teredinibacter → Teredinibacter haidensis	738	Open in IMG/M
3300006903\|Ga0075426_10143745	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1720	Open in IMG/M
3300006969\|Ga0075419_10306193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	1072	Open in IMG/M
3300009100\|Ga0075418_10241314	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1924	Open in IMG/M
3300009137\|Ga0066709_103718561	Not Available	554	Open in IMG/M
3300009147\|Ga0114129_11169870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Polaromonas → Polaromonas jejuensis	959	Open in IMG/M
3300009147\|Ga0114129_11640576	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	786	Open in IMG/M
3300009156\|Ga0111538_13656669	Not Available	533	Open in IMG/M
3300009157\|Ga0105092_10004130	All Organisms → cellular organisms → Bacteria	7731	Open in IMG/M
3300009162\|Ga0075423_11571913	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300009792\|Ga0126374_10393352	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300009810\|Ga0105088_1017577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Cellvibrionales → Cellvibrionaceae → Teredinibacter → Teredinibacter haidensis	1102	Open in IMG/M
3300010046\|Ga0126384_10097317	All Organisms → cellular organisms → Bacteria	2162	Open in IMG/M
3300010046\|Ga0126384_10367872	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300010047\|Ga0126382_10387309	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300010047\|Ga0126382_11376461	Not Available	642	Open in IMG/M
3300010047\|Ga0126382_11864661	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	567	Open in IMG/M
3300010047\|Ga0126382_12252290	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300010358\|Ga0126370_10120827	All Organisms → cellular organisms → Bacteria	1857	Open in IMG/M
3300010358\|Ga0126370_11580228	Not Available	627	Open in IMG/M
3300010359\|Ga0126376_11610978	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300010359\|Ga0126376_12405052	Not Available	574	Open in IMG/M
3300010366\|Ga0126379_10052072	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3377	Open in IMG/M
3300010366\|Ga0126379_11729711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	730	Open in IMG/M
3300010376\|Ga0126381_101279341	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1060	Open in IMG/M
3300010398\|Ga0126383_12183265	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	640	Open in IMG/M
3300010398\|Ga0126383_13017571	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	550	Open in IMG/M
3300012202\|Ga0137363_10089332	All Organisms → Viruses → Predicted Viral	2316	Open in IMG/M
3300012202\|Ga0137363_11631062	Not Available	537	Open in IMG/M
3300012203\|Ga0137399_10690620	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	859	Open in IMG/M
3300012361\|Ga0137360_10110390	All Organisms → cellular organisms → Bacteria	2122	Open in IMG/M
3300012922\|Ga0137394_10311172	All Organisms → cellular organisms → Bacteria	1345	Open in IMG/M
3300012923\|Ga0137359_10606131	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	960	Open in IMG/M
3300012929\|Ga0137404_10076435	All Organisms → cellular organisms → Bacteria	2644	Open in IMG/M
3300012930\|Ga0137407_10211307	All Organisms → cellular organisms → Bacteria	1745	Open in IMG/M
3300012948\|Ga0126375_10273129	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1158	Open in IMG/M
3300012948\|Ga0126375_10503143	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300012971\|Ga0126369_12097548	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	653	Open in IMG/M
3300012986\|Ga0164304_10378723	All Organisms → cellular organisms → Bacteria	998	Open in IMG/M
3300015053\|Ga0137405_1244035	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	528	Open in IMG/M
3300015372\|Ga0132256_102006933	Not Available	685	Open in IMG/M
3300016319\|Ga0182033_10589731	Not Available	964	Open in IMG/M
3300016404\|Ga0182037_11036504	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300016422\|Ga0182039_10531893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1019	Open in IMG/M
3300018053\|Ga0184626_10005209	All Organisms → cellular organisms → Bacteria	4917	Open in IMG/M
3300018054\|Ga0184621_10250440	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → Nitrospira → Candidatus Nitrospira kreftii	631	Open in IMG/M
3300018075\|Ga0184632_10256974	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	762	Open in IMG/M
3300019789\|Ga0137408_1086113	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300025910\|Ga0207684_11491111	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300027873\|Ga0209814_10046326	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1813	Open in IMG/M
3300027880\|Ga0209481_10024355	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2702	Open in IMG/M
3300027880\|Ga0209481_10280624	Not Available	843	Open in IMG/M
3300027880\|Ga0209481_10477602	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis → Candidatus Methylomirabilis limnetica	643	Open in IMG/M
3300027880\|Ga0209481_10492804	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	632	Open in IMG/M
3300027909\|Ga0209382_10087876	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. AUGA SZCCT0283	3655	Open in IMG/M
3300027909\|Ga0209382_10089877	All Organisms → cellular organisms → Bacteria	3609	Open in IMG/M
3300027909\|Ga0209382_11419132	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	696	Open in IMG/M
3300031820\|Ga0307473_11246613	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300031910\|Ga0306923_10548516	All Organisms → cellular organisms → Bacteria → Proteobacteria	1303	Open in IMG/M
3300031941\|Ga0310912_11007386	All Organisms → cellular organisms → Bacteria	639	Open in IMG/M
3300031946\|Ga0310910_10456514	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1014	Open in IMG/M
3300032180\|Ga0307471_100283246	All Organisms → cellular organisms → Bacteria	1733	Open in IMG/M
3300032180\|Ga0307471_101407660	Not Available	857	Open in IMG/M
3300032205\|Ga0307472_100322230	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1254	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.23%
Host-Associated	Host-Associated	35.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	57.66%
Plants	Host-Associated → Plants	35.77%
Aquatic	Environmental → Aquatic	6.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.93%
Rhizosphere	Host-Associated → Plants → Rhizosphere	35.04%
Sediment	Environmental → Aquatic → Sediment	3.65%
Freshwater	Environmental → Aquatic → Freshwater	1.46%
Marine	Environmental → Aquatic → Marine	1.46%
Floodplain	Environmental → Terrestrial → Floodplain	0.73%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	34.31%
Loam	Environmental → Terrestrial → Soil → Loam	9.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.65%
Sand	Environmental → Terrestrial → Soil → Sand	2.19%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.46%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.46%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.73%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	34.31%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.20%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.38%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.65%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.19%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.46%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	34.31%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.60%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	10.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.38%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.92%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.92%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.19%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.46%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.73%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.73%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004052	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPgaii200_04978671	2228664022	Soil	VLVDLSLWSTSIIGLAVQSPDGKYFGSLRAPSNVYNHVLEFLKRSQGHKLREVMDSEVDISDVVQ
ICChiseqgaiiDRAFT_22401943	3300000033	Soil	VECADGRYLGSIRAPRNVYNHVLDFPKRTHGRKLREVMDPEI
AF_2010_repII_A100DRAFT_10980482	3300000655	Forest Soil	IGLAVQCSDGRYFGSIRAPGPVYDYVLEFLKQNHGRKLREVMDAEIDISDVIQ*
JGI1027J12803_1009640142	3300000955	Soil	FGSLRAPSNVYDHVLEFLKRTHGRKLREVMDAEIDISDVIQ*
Ga0055490_101775811	3300004052	Natural And Restored Wetlands	MGDNDHSAMPRKVFVSIRALGPVYDHVLEFLRRNHGRKLREAMDAEIDISDVIQ
Ga0055490_101865181	3300004052	Natural And Restored Wetlands	QRPDGKYFGSIRAPEPVYEHVLEFLKRNDGRKLREVMDAEIDIADVIQ*
Ga0065705_101628302	3300005294	Switchgrass Rhizosphere	VQRSACLLIFPYGGASIISLAVECPAGRYFGSIRAPGSVYDRVLEFLKRNHGRKLREVMDAEIDISDVIQ*
Ga0065705_106333681	3300005294	Switchgrass Rhizosphere	MPDERYFGSIRAPGPVYDHVLEFLKRNHGWKLCEVMDAEIDISNVMQ*
Ga0065705_109457512	3300005294	Switchgrass Rhizosphere	VECAEGKYFGSIRAPGPVYDHVLELLRRNHGRKLREVMDAEIDISDVLQ*
Ga0065707_101402002	3300005295	Switchgrass Rhizosphere	VNNLTVQRSACLLIFPYGGASIISLAVECPAGRYFGSIRAPGSVYDRVLEFLKRNHGRKLREVMDAEIDISDVIQ*
Ga0066388_1044299531	3300005332	Tropical Forest Soil	VECPDGKYFGSIRAPGPVYDHVLEFLKQNYGRTLREVMDAEIDISDVIQ*
Ga0066388_1072166431	3300005332	Tropical Forest Soil	LMYLSTGGTSVIGLAVQCSDGRYFGSIRVSGLVYDHVVQSLKRNQGRTLREVMDAEIDISDVIQ*
Ga0066388_1073704832	3300005332	Tropical Forest Soil	CPDGKYFGSLRTTGNVYDRVLEFLKQNRGRKLREIVDAEIDISDVIQ*
Ga0070708_1000578034	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MGNVHHRSRVQCVDGKYFGSLRAPGNVYDQGLQFLMRNHGRKLCEVMDAEIDISDVIQ*
Ga0070707_1002745161	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	PDGRYFGSIRVPGQVYDHVVEFLNRNQGRKLYEVMDAEIDISDVIQ*
Ga0070707_1009624771	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MGNVHHRSRVQCVDGKYFGSLRAPGNVYDQGLQFLMRNHGRKLCEVMDAEIDISDVI
Ga0070707_1015802511	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	KYFGSLRAPRNVYDRVLEFLKQNYGRKLREVIDTEIDISDVIQ*
Ga0070699_1021001541	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MGNVHHRSRVQCVDGKYFGSLRAPGNVYDQGLQFLKRNHGRKLCEVMDAEIDISDVIQ*
Ga0066661_108489031	3300005554	Soil	GTSIIGLAVQCPDGKYFGSIRAPRNVYDHVLQFLKRNHGRKLQKVMDAEIDISDVIQ*
Ga0066692_107382801	3300005555	Soil	MQTVCLLVCLYIGTSIINLVVDCADGRYFGSIRAPGNVYDHVLEFLKRHHGRKLREVMDAEIDISGVIQ*
Ga0066704_108644971	3300005557	Soil	SIIGLAVQCPDGKYFGSIRAPRNVYDHVLQFLKRNHGRKLQKVMDAEIDISDVIQ*
Ga0066700_102172882	3300005559	Soil	ASIRAPSNVYDHVLEFLNRNHARRLREVMDGEIDISDVIQ*
Ga0066700_103880661	3300005559	Soil	VECPDGKDFGSLRVTSNVYDYVLEFLKRTHGRKLSEVMDAEIDISDVIQ*
Ga0066700_108505422	3300005559	Soil	MGDFHHKPCVDCADGRYFASIRAPGNVYDHVLEFLKRNHGRKLREVMD
Ga0066905_1012859891	3300005713	Tropical Forest Soil	VQCPDGRYFGSIRVTRDVYDRVLGFLRQSHGQKLREVMEAEIDISELISIVVVPK*
Ga0066905_1022372491	3300005713	Tropical Forest Soil	GTTIIGLAIQCPDGKYFGSLRTTEKVYDRVLEFLKQNHGRKLREVMEAEIDISDVIQ*
Ga0066903_1025393063	3300005764	Tropical Forest Soil	GLAVQCPDGKYFCSVRAPRNVYDHVLEFLKQNQGRKLCEVIDAEIDISDVIQ*
Ga0066903_1044535672	3300005764	Tropical Forest Soil	LSLWGTTIIGLAVQCPDGKYFCSVRAPANVYDHVLEFLKQNQGRKLCEVIDAEIDISEVIQ*
Ga0081455_10000077111	3300005937	Tabebuia Heterophylla Rhizosphere	MGHNHIGLAVQCPDGRYFGSIRVTRDVYDRVLEFLRRNHGRKLREGMDTEIDISELIQ*
Ga0075417_101190223	3300006049	Populus Rhizosphere	VLLLVCLYGGTSIIGLVVECPDGRYFGSIRAPSNVYDRVLEFLKRNHGRKLREVMDAEIDISDVIQ*
Ga0075417_101913072	3300006049	Populus Rhizosphere	HFGSIRAPGPVYDHVLEFLRRNHGRKLREVMDAEIDISSVIH*
Ga0075417_104023041	3300006049	Populus Rhizosphere	IRVSRGVYDRVLEFLNSNHGQKLRDVMDAEIDISDVIQ*
Ga0075417_105518722	3300006049	Populus Rhizosphere	SLWRPSIIGLAVHAPDGRYFGSLRAPGPVYDRVLEFLKRNHGRTLREVMATEIDISDVIQ
Ga0075432_105755801	3300006058	Populus Rhizosphere	MGNDIIGLAVQCPDGRYFGSIRAPGPVYDHVLEFLKRHHGRKLREVLDAEIDVSDLMQ*
Ga0066659_114900602	3300006797	Soil	MENVNLAVQCPDGKYFGSIRASGPVYDHVLEFLNRNHGRRLREVMDGEIDISDVIQ*
Ga0075428_1001242953	3300006844	Populus Rhizosphere	VTRNVYDYVLEFLKRSHGRKLREVMDADIDISDVIE*
Ga0075428_1010554743	3300006844	Populus Rhizosphere	VVECPDGKYFGSIRAPGPVYDYVLEFLKRNHGRKLREVMDAEIDISDVIQ*
Ga0075421_1001959791	3300006845	Populus Rhizosphere	MWPCIINLIVEYPDGRYFGSIRATSNVYDHVLEFLKRSHERELCEVVDAEIDISELIQ*
Ga0075421_1003869631	3300006845	Populus Rhizosphere	MSIIGLAVQCPDGKHFGSIRAPGPVYDHVLEFLRRNHGRTLREVMDAEIDISDVIH*
Ga0075421_1015719882	3300006845	Populus Rhizosphere	SIIGLAVQCPDGKHFGSIRAPGPVYDHVLEFLRRNHGRKLREVMDAEIDISSVIH*
Ga0075421_1017845302	3300006845	Populus Rhizosphere	SDEIEMVWEHGKTDLNLWGTSIIGLAVQCPDGKYFGSIRVPCDAYDHVLEFLKRNHGRKLREVMDAEN*
Ga0075421_1017931572	3300006845	Populus Rhizosphere	SDEIEMVWEHGKTDLNLWGTSIIGLAVQCPDGKYFGSIRAPEPVYDHVLEFLKRNYGRKLREVMDAEIDISEN*
Ga0075421_1027496631	3300006845	Populus Rhizosphere	VLVALSLWGTSIIGLAVQCPDGRYFGSIRAPGPVYDHVLEFLKRNHGRKLREVMDAEIDISDVIQ*
Ga0075431_1020192291	3300006847	Populus Rhizosphere	LWGTSIIGFAVQCPEGRYFGTLRATGQVYDHVLEFLKRHQGRKLREVMDAEIDISDVIQ*
Ga0075433_100700072	3300006852	Populus Rhizosphere	VPDGRYFGSLTALSPVYDHVLKFLKRNHGRKLREVMDADIDISELIQ*
Ga0075433_106363902	3300006852	Populus Rhizosphere	MGNDIIGLAVQCPDGRYFGSIRAPGPVYDHVLEFLKRNHGRKLREVMDVEIDISDVIQ*
Ga0075433_107892001	3300006852	Populus Rhizosphere	LGTSIINLVVECPDGKYFGSIRAPANIYNHVLEFLNRNHGRKLREVMDADIDITDVIQ*
Ga0075433_111432731	3300006852	Populus Rhizosphere	EIEMVWEHGKTDLNLWGTSIIGLAVQCPDGKYFGSIRAPEPVYDHVLEFLKRNYGRKLREVMDAEIDISEN*
Ga0075433_117272091	3300006852	Populus Rhizosphere	NLWGTSIIGLAVQCPDGKYFGSIRVSRGVYDRVLEFLNSNHGQKLRDVMDAEIDISDVIQ
Ga0075420_1003506152	3300006853	Populus Rhizosphere	VPDGRYFGSLTALSPVYDHVLKFLKRNHGRKLREVMDAEID
Ga0075420_1004499842	3300006853	Populus Rhizosphere	VGPDGKYFGSLRAVSNVYDQVLEFLKRNHGRTFREVMDAEIDISDVIQ*
Ga0075425_1028940272	3300006854	Populus Rhizosphere	DGVLIDLSLWGTSIIGLAVQCPDGKYFGSIRAPSNVYEHVLEFLRRNHGRKLREVMDAEIDISDVIQ*
Ga0075425_1029852121	3300006854	Populus Rhizosphere	LPPASRGTSIIGLAVQCPDGRYFGSIRVSRGVYDRVIEFLNSNHGQKLRDVMDAEIDISDVIQ*
Ga0075434_1010403732	3300006871	Populus Rhizosphere	MVWEHGKTDLNLWGTSIIGLAVQCPDGKYFGSIRAPEPVYDHVLEFLKRNYGRKLREVMDAEIDISEN*
Ga0075434_1025629171	3300006871	Populus Rhizosphere	GTSIIGLAVQCPDGKYFGSIRAPGPVYDHVLEFLKRHHGRKLREVMDAEIDISDLVQ*
Ga0075429_1009818651	3300006880	Populus Rhizosphere	TSIIGLAVQCPDGKYFGSIRVSRGVYDRVLEFLNSNHGQKLRDVMDAEIDISDVIQ*
Ga0075426_101437453	3300006903	Populus Rhizosphere	LLFCLLWGMSIIGLAVQCPDGKHFGSIRAPGPVYDHVLEFLRRNHARTLREVMDAEIDISDVIH*
Ga0075426_113009241	3300006903	Populus Rhizosphere	EMVWEHGKTDLNLWGTSIIGLAVQCPDGKYFGSIRAPEPVYDHVLEFLKRNYGRKLREVMDAEIDISEN*
Ga0075419_100289884	3300006969	Populus Rhizosphere	MVWEHGKTDLNLWGTSIIGLAVQCPDGKYFGSIRVPCDAYDHVLEFLKRNHGRKLREVMDAEN*
Ga0075419_103061932	3300006969	Populus Rhizosphere	RPVYDRVLEFLKRSHGRKIREVMDADIDISEVIQ*
Ga0075418_102413141	3300009100	Populus Rhizosphere	LLFCLLWGTSIIGLAVQCPDGKHFGSIRAPGPVYDHVLEFLRRNHGRTLREVMDAEIDISDVIH*
Ga0066709_1037185611	3300009137	Grasslands Soil	HGKEVGTIRAPRNVYDRVLESLKQNHGRKLRKIIDAEIDISDVIQ*
Ga0114129_111698702	3300009147	Populus Rhizosphere	SLRAPGPVYDRVLEFLKRNHGRTLREVMATEIDISDVIQ*
Ga0114129_114599912	3300009147	Populus Rhizosphere	MADGKYFGSIRAPRNVYDPVFEFLKRNRGRTFREVMGAEIDISDVIQ*
Ga0114129_114864901	3300009147	Populus Rhizosphere	RSDEIEMVWEHGKTDLNLWGTSIIGLAVQCPDGKYFGSIRAPEPVYDHVLEFLKRNYGRKLREVMDAEIDISEN*
Ga0114129_116405762	3300009147	Populus Rhizosphere	LAVQCPDGKHFGSIRAPGPVYDHVLEFLRRNHGRKLREVMDAEIDISSVIH*
Ga0111538_136566691	3300009156	Populus Rhizosphere	FGSLRAPGPVYEHVLEFLKRNQGRKLREVMDAEIDISDVIQ*
Ga0105092_100041304	3300009157	Freshwater Sediment	MVAAFRAPSNVYDRVLEFLKRNHGRKLREVIDAEIDISDMIQ*
Ga0075423_115719132	3300009162	Populus Rhizosphere	VQCPDGRYFGSIRAPGPVYDHVLEFLKRHHGRKLREVLDAEIDVSDLMQ*
Ga0105104_105340742	3300009168	Freshwater Sediment	LVDLSLCGTSVIGLAVQCPDGRYFGSLRATGPVYVHVLEFLKRNHGRKLREVMDAEIDISDVIQ*
Ga0126374_103933521	3300009792	Tropical Forest Soil	CSRRFANRQLGAVECPDGKYFGSIRAPGPVYDHVLEFLKQNYGRTLREVMDAEIDISDVIQ*
Ga0105088_10175771	3300009810	Groundwater Sand	PNGRYFGSLRAPGPVYDHVLEFLRQNYGRKLHEAMDREIDISDVIQ*
Ga0105062_11001981	3300009817	Groundwater Sand	VLVDLSLWGTSIINLVVECADGRYFGSIRAPSNVYDHVLEFLKRNHGRKLREVMDAEIDISDVVQ*
Ga0105068_10396011	3300009836	Groundwater Sand	DVLVDLSRWGTSVIGLAVQCPDGRYFGSLRAPGPVYDHVLEFLRQNYGRKLHEAMDREIDISDVIQ*
Ga0126384_100973171	3300010046	Tropical Forest Soil	QIFRLDQAPAAVYDRVLEFLKQNHGKKLREIIDADIDISDMIQ*
Ga0126384_103678721	3300010046	Tropical Forest Soil	LRAPRNVCDRVLEFLKQNHGRKLREVMDAEIDISDVIH*
Ga0126382_103873091	3300010047	Tropical Forest Soil	TAKYFGSIRVPRDVYDRVLEFLKQSHGRKLREVMDTDIDIADVIH*
Ga0126382_113764611	3300010047	Tropical Forest Soil	GKYFGAIRAPRNVYNHVLEFLKRNHGRKLREVVDAGIDISDLIQ*
Ga0126382_118646612	3300010047	Tropical Forest Soil	IIGLAIQCPDGKYFGSIRVSRDIYDRVFDFLKQNHGRKLREIIDGEIDISDVIQ*
Ga0126382_122522901	3300010047	Tropical Forest Soil	MRRSIIGLTLQCPDGKYFGSIRATSNVYDHVLEFTKRSHERELCEVVDAEIDISELIQ*
Ga0126370_101208273	3300010358	Tropical Forest Soil	MGHVDIGLPVQCPVGKYFGAIRAPRNVYNHVLEFLKRNHGRKLREVVDAGIDI
Ga0126370_115802282	3300010358	Tropical Forest Soil	VGKYFGAIRAPRNVYNHVLEFLKRNHGRKLREVVDAGIDISDLIQ*
Ga0126376_101737654	3300010359	Tropical Forest Soil	VLVGLSLWGTTIIGLAVQCPDGKYFCSVRAPANVYGHVLEFLKRNQGRKLREVIDAEIDISDVIQ*
Ga0126376_116109783	3300010359	Tropical Forest Soil	RYFGSIRASDLVYDHVLESLKRNQGRKLCEVMEADIDISDVVQ*
Ga0126376_124050522	3300010359	Tropical Forest Soil	VPRDVYDRVLEFLKQSHGRKLREVMDTDIDIADVIH*
Ga0126379_100520721	3300010366	Tropical Forest Soil	GKYFGSLRTTGNVYDRVFEFLKQNRGRKLREVVDAEIDISDVIQ*
Ga0126379_117297111	3300010366	Tropical Forest Soil	GSIKALGPVHDRVLEFLKQNQGHTLRETMDAEIDLSDVIQ*
Ga0126381_1012793412	3300010376	Tropical Forest Soil	VADGVLVDLSFWCTSIIGLAIQCPEGKYFGSIRVSRDIYDRVLDFLKQNHGRKLREIVDGEIDISDVIQ*
Ga0126383_121832652	3300010398	Tropical Forest Soil	GSTIIGLAVQCPDGKYFCSVRAPANVYGHVLEFLKRNQGRKLREVIDAEIDISDVIQ*
Ga0126383_130175711	3300010398	Tropical Forest Soil	YLSTGGTSVIGLAVQCSDGRYFGSIRAPETVYDHVLESLKRHQGRKLREVMDAEIDISDVIR*
Ga0137363_100893323	3300012202	Vadose Zone Soil	MGDFHHKPCVDCADGRYFASIRAPGNVYDHVLEFLKRNHGRKLREVMDAEIDISDVIQ*
Ga0137363_110616712	3300012202	Vadose Zone Soil	MHPLQTGCLLGCRSSIINLAVECADGRYFGSIKAPAQVYDYVLEFLKHNDGRKLREVMDAEIDIANMIQ*
Ga0137363_116310621	3300012202	Vadose Zone Soil	SIRAPGQVYDHGLEFLKQNHGRKLREVVDAEIDISDVIQ*
Ga0137399_106906201	3300012203	Vadose Zone Soil	VECSDGRYFGSLRVSRNVYDRVLEFLKRNHGRKLREGLDAEIDISDVIQ*
Ga0137362_104632083	3300012205	Vadose Zone Soil	MHPLQTGCLLGCRSSIIILAVECADGRYFGSIKAPAQVYDYVLEFLKHNDGRKLREVMDAEIDIANMIQ*
Ga0137360_101103901	3300012361	Vadose Zone Soil	RKYFCSIRAPGQVYDHGLEFLKQNHGRKLREVVDAEIDISDVIQ*
Ga0137360_109528672	3300012361	Vadose Zone Soil	VLVALSLWGTSIIGLAVQCPDGKYFGSLRAPRNVYDRVLEFLKRHHGRKLREVIDAEIDISGVIQ*
Ga0137394_103111723	3300012922	Vadose Zone Soil	SIIALALQCPDGRYFGSIRAPSNVYDQVLEFLKRNHGRKLREVMDAEIDISDVIQ*
Ga0137359_103640641	3300012923	Vadose Zone Soil	APRNVYDHVLQFLKRNHGRKLQKVMDAEIDISDVIQ*
Ga0137359_106061312	3300012923	Vadose Zone Soil	LGNVDHWLAVQCPDGKYFGSIRAPRNVYDHVLQFLKRNHGRKLQKVMDAEIDISDVIQ
Ga0137404_100764355	3300012929	Vadose Zone Soil	MENVNLAVQCPDGKYFGSIRASGPVYDHVLEFLKRNHGRKLREVMDAEIDISDVIQ*
Ga0137407_102113072	3300012930	Vadose Zone Soil	YFGSIRAPGPVCDHVLDFLKRNHGRKLREVMDAEIDIADVIQ*
Ga0137410_104020872	3300012944	Vadose Zone Soil	LVDLSLWGTSIIGLAVQCPDGRYFGSLRAPSNVYDHVLEFLKRTHGRKLREVMDAEIDISDVIQ*
Ga0126375_102731291	3300012948	Tropical Forest Soil	LAVQCTDGRYFGSIRVPETVYDHVLESLKRHQGRKLREVMDAEIDISNVVQ*
Ga0126375_105031431	3300012948	Tropical Forest Soil	IRVTRDVYDRVLEFLRRNHGRTLNEVMDADIDISELIH*
Ga0126369_120975481	3300012971	Tropical Forest Soil	GTSIIGLAIQCPDGKYFGSIRVSRDIYDRVLDFLKQNHGRKLRKIVNAEVDIADVIQ*
Ga0164304_103787231	3300012986	Soil	FGSIRAPSNVYDQVFDFLKRSHGRKLHKVMDAEIDISDVIQ*
Ga0137405_12440351	3300015053	Vadose Zone Soil	LAVQCPDGKYFASIRAPSNVYDHVLEFLNRNHGRRLREVMDGEIDISDVIQ*
Ga0132256_1020069331	3300015372	Arabidopsis Rhizosphere	SEWGTTTIGLAVQRPDGKYFGSIRAPEPVYDHVLESLKRNHGQKLREVMDAEVDISDVMH
Ga0182033_105897312	3300016319	Soil	VECPDGKYFGCIRAPAQVYDQVLEFLMRNYGRKLREVMDAEIDISDV
Ga0182037_110365041	3300016404	Soil	LLGGTSVINLVVDCADGKYFGSISASANVYDHVLEFLKRHHGRKLRELMDGEIDISDVMQ
Ga0182039_105318931	3300016422	Soil	IGLAIQCPDGKYFGSIRATSNVYDHVLEFLTHNHGRKLREVMGAEIDTSDMIHLVPRNPTRSPEFI
Ga0184638_12483901	3300018052	Groundwater Sediment	NLSLWGTSIIGVAVQCPDGKYFGSIRAPRNVYDHVLEFLKRNHGRIIREVMDAEIDISEVIQ
Ga0184626_100052095	3300018053	Groundwater Sediment	VECADGKYFGSIRAPGPVYDQVLEFLKPNHGRKLREVMDAEIDISDVIQ
Ga0184621_102504401	3300018054	Groundwater Sediment	RAPRNVYDRVLEFLKRNHGRTFREVMDAEIDISELIE
Ga0184635_104170251	3300018072	Groundwater Sediment	VLVDLSLWGTSIIGLMVECSDGKYFASIRVSRNVYDQVLEFLKRYHGRTFREVMDAEIDISELIQ
Ga0184632_102569741	3300018075	Groundwater Sediment	MDANPLVADGVLVDPVSMGNVDHRSRGTMPNGKYFGSIRAPGPVYDQVLAFLKQNHGRKLREVMDADIDISDVIQ
Ga0137408_10861132	3300019789	Vadose Zone Soil	VQCPDGKYFGPVRVPRIVYDHVLEFLKRNHGRTFREVMDAEIDISDVIQ
Ga0207684_114911112	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPNGKYFGSIRAPHNVYDHVLEFLKQNHGRKLREVMDAEIDISDVIQ
Ga0209814_100463261	3300027873	Populus Rhizosphere	VLLLVCLYGGTSIIGLVVECPDGRYFGSIRAPSNVYDRVLEFLKRNHGRKLREVMDAEIDISDVIQ
Ga0209814_103787521	3300027873	Populus Rhizosphere	WEHGKTDLNLWGTSIIGLAVQCPDGKYFGSIRAPEPVYDHVLEFLKRNYGRKLREVMDAEIDISEN
Ga0209481_100243553	3300027880	Populus Rhizosphere	MSIIGLAVQCPDGKHFGSIRAPGPVYDHVLEFLRRNHGRTLREVMDAEIDISDVIH
Ga0209481_102806243	3300027880	Populus Rhizosphere	TSIIGLAVECPDGRYFGSIRVSCNVYDRVLEFLKRNHGRKLREVMDAEIDVSDVIQ
Ga0209481_104776021	3300027880	Populus Rhizosphere	FVSVGPDGKYFGSLRAVSNVYDQVLEFLKRNHGRTFREVMDAEIDISDVIQ
Ga0209481_104928042	3300027880	Populus Rhizosphere	SLWGTSIIGLAVQCPDGKYFGSIRVSRGVYDRVLEFLNSNHGQKLRDVMDAEIDISDVIQ
Ga0209382_100878765	3300027909	Populus Rhizosphere	LPPASRGTSIIGLAVQCPDGRYFGSIRVSRGVYDRVIEFLNSNHGQKLRDVMDAEIDISDVIQ
Ga0209382_100898775	3300027909	Populus Rhizosphere	MWPCIINLIVEYPDGRYFGSIRATSNVYDHVLEFLKRSHERELCEVVDAEIDISELIQ
Ga0209382_101016214	3300027909	Populus Rhizosphere	MVWEHGKTDLNLWGTSIIGLAVQCPDGKYFGSIRVPCDAYDHVLEFLKRNHGRKLREVMDAEN
Ga0209382_114191321	3300027909	Populus Rhizosphere	SIIGLAVQCPDGKHFGSIRAPGPVYDHVLEFLRRNHGRKLREVMDAEIDISSVIH
Ga0307473_112466131	3300031820	Hardwood Forest Soil	TLWGTTIIGLAVQCPDGKYFGSIRASSNVYDHVLEFLKRSHGRKLREVMDAEIDISDVIQ
Ga0306923_105485163	3300031910	Soil	CPEGKYFGSIRVPRDVYDRVLEFLKQNHGRKLHEVMDAEIDISDVVQ
Ga0310912_110073861	3300031941	Soil	SIRVQRDVYDRVLEFLRRNHGRKLREVMDSEIDIFDVIH
Ga0310910_104565144	3300031946	Soil	MEYFGSIRVQRDVYDRVLEFLRRNHGRKLREVMDSEIDIFDVIH
Ga0307471_1002832462	3300032180	Hardwood Forest Soil	GSIRTPGNVYDHVLVFLKERHGRKLRQVIDAEIDISNVLQ
Ga0307471_1014076601	3300032180	Hardwood Forest Soil	VPMGNVHHRSRVQCVDGKYFGSLRAPGNVYDQGLQFLKRNHGRKLCEVMDAEIDISDVIQ
Ga0307472_1003222303	3300032205	Hardwood Forest Soil	IRATSNVYDQVLEFLTRTDGRKLREVMDAEIDISDLIQ
Ga0364945_0087814_472_669	3300034115	Sediment	VLVDLSLWGTSIIGLAVQCPDGKYFASIRVPRNAYDHVLEFLKRNHGRKFREVMDAEIDISDVIQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056443

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences