NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F056646

Metagenome / Metatranscriptome Family F056646

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F056646
Family Type Metagenome / Metatranscriptome
Number of Sequences 137
Average Sequence Length 91 residues
Representative Sequence FGIILMQKGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Number of Associated Samples 111
Number of Associated Scaffolds 137

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 1.47 %
% of genes near scaffold ends (potentially truncated) 97.81 %
% of genes from short scaffolds (< 2000 bps) 91.24 %
Associated GOLD sequencing projects 100
AlphaFold2 3D model prediction Yes
3D model pTM-score0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (94.891 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil
(13.139 % of family members)
Environment Ontology (ENVO) Unclassified
(37.956 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(55.474 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 64.66%    β-sheet: 0.00%    Coil/Unstructured: 35.34%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.55
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 137 Family Scaffolds
PF04237YjbR 10.22
PF01863YgjP-like 9.49
PF00296Bac_luciferase 8.03
PF10027DUF2269 6.57
PF06224HTH_42 3.65
PF00583Acetyltransf_1 3.65
PF02126PTE 3.65
PF00561Abhydrolase_1 3.65
PF13826DUF4188 2.19
PF12697Abhydrolase_6 2.19
PF01497Peripla_BP_2 1.46
PF09604Potass_KdpF 1.46
PF01872RibD_C 1.46
PF07690MFS_1 0.73
PF13231PMT_2 0.73
PF00171Aldedh 0.73
PF01311Bac_export_1 0.73
PF13527Acetyltransf_9 0.73
PF14362DUF4407 0.73
PF01494FAD_binding_3 0.73
PF03814KdpA 0.73
PF00378ECH_1 0.73
PF02780Transketolase_C 0.73
PF03446NAD_binding_2 0.73
PF02683DsbD 0.73
PF12773DZR 0.73
PF07883Cupin_2 0.73

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 137 Family Scaffolds
COG2315Predicted DNA-binding protein with ‘double-wing’ structural motif, MmcQ/YjbR familyTranscription [K] 10.22
COG1451UTP pyrophosphatase, metal-dependent hydrolase familyGeneral function prediction only [R] 9.49
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 8.03
COG1735Predicted metal-dependent hydrolase, phosphotriesterase familyGeneral function prediction only [R] 3.65
COG3214DNA glycosylase YcaQ, repair of DNA interstrand crosslinksReplication, recombination and repair [L] 3.65
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 1.46
COG0614ABC-type Fe3+-hydroxamate transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.46
COG06542-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductasesEnergy production and conversion [C] 1.46
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 1.46
COG4558ABC-type hemin transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.46
COG4592ABC-type Fe2+-enterobactin transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.46
COG4594ABC-type Fe3+-citrate transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.46
COG4607ABC-type enterochelin transport system, periplasmic componentInorganic ion transport and metabolism [P] 1.46
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.73
COG0578Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 0.73
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 0.73
COG0665Glycine/D-amino acid oxidase (deaminating)Amino acid transport and metabolism [E] 0.73
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.73
COG2060K+-transporting ATPase, KdpA subunitInorganic ion transport and metabolism [P] 0.73
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.73

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms94.89 %
UnclassifiedrootN/A5.11 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_103733713Not Available816Open in IMG/M
3300000956|JGI10216J12902_111854668All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium880Open in IMG/M
3300003993|Ga0055468_10037457All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1174Open in IMG/M
3300003998|Ga0055472_10011489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1746Open in IMG/M
3300003999|Ga0055469_10061600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1009Open in IMG/M
3300004114|Ga0062593_100567327All Organisms → cellular organisms → Bacteria1073Open in IMG/M
3300004156|Ga0062589_101905097All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium600Open in IMG/M
3300004479|Ga0062595_102510318All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300005168|Ga0066809_10102279All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300005185|Ga0066811_1030636All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300005329|Ga0070683_100149856All Organisms → cellular organisms → Bacteria2211Open in IMG/M
3300005334|Ga0068869_101828250All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium543Open in IMG/M
3300005337|Ga0070682_101059394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium676Open in IMG/M
3300005337|Ga0070682_101114425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium661Open in IMG/M
3300005338|Ga0068868_100543993All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1022Open in IMG/M
3300005341|Ga0070691_10734346All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria596Open in IMG/M
3300005353|Ga0070669_100430974All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1084Open in IMG/M
3300005356|Ga0070674_100465878All Organisms → cellular organisms → Bacteria → Terrabacteria group1046Open in IMG/M
3300005367|Ga0070667_100436700All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1195Open in IMG/M
3300005445|Ga0070708_100522119All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1120Open in IMG/M
3300005458|Ga0070681_10143323All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2318Open in IMG/M
3300005535|Ga0070684_100176461All Organisms → cellular organisms → Bacteria1942Open in IMG/M
3300005535|Ga0070684_100225728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1709Open in IMG/M
3300005535|Ga0070684_101814089All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium575Open in IMG/M
3300005535|Ga0070684_102252246All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium514Open in IMG/M
3300005539|Ga0068853_100324481All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1428Open in IMG/M
3300005561|Ga0066699_10594170All Organisms → cellular organisms → Bacteria795Open in IMG/M
3300005578|Ga0068854_100312456All Organisms → cellular organisms → Bacteria1275Open in IMG/M
3300005719|Ga0068861_102523523All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium517Open in IMG/M
3300005840|Ga0068870_11374037All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria517Open in IMG/M
3300005873|Ga0075287_1064559All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium518Open in IMG/M
3300006051|Ga0075364_10044295All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2894Open in IMG/M
3300006058|Ga0075432_10567948All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria515Open in IMG/M
3300006358|Ga0068871_101761607All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria588Open in IMG/M
3300006575|Ga0074053_11850628All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium514Open in IMG/M
3300006580|Ga0074049_12789611All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium544Open in IMG/M
3300006845|Ga0075421_100191442All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2537Open in IMG/M
3300009094|Ga0111539_11774783All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium715Open in IMG/M
3300009094|Ga0111539_11881273All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium694Open in IMG/M
3300009098|Ga0105245_10816627All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium971Open in IMG/M
3300009098|Ga0105245_10976377All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium891Open in IMG/M
3300009137|Ga0066709_100602851All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1565Open in IMG/M
3300009147|Ga0114129_12746957All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium586Open in IMG/M
3300009148|Ga0105243_11122350All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium796Open in IMG/M
3300009156|Ga0111538_10808699All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1187Open in IMG/M
3300009545|Ga0105237_11462031All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium690Open in IMG/M
3300009553|Ga0105249_12156012All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium630Open in IMG/M
3300010322|Ga0134084_10409371All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium531Open in IMG/M
3300010362|Ga0126377_12331165All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium611Open in IMG/M
3300010371|Ga0134125_12483813All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium563Open in IMG/M
3300010375|Ga0105239_10014331All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia8796Open in IMG/M
3300010375|Ga0105239_10655233Not Available1199Open in IMG/M
3300010403|Ga0134123_13287305All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium521Open in IMG/M
3300011107|Ga0151490_1492021All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1013Open in IMG/M
3300011107|Ga0151490_1725080All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium745Open in IMG/M
3300011119|Ga0105246_10147300All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1778Open in IMG/M
3300011119|Ga0105246_10210514All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1517Open in IMG/M
3300011119|Ga0105246_10475627Not Available1056Open in IMG/M
3300012507|Ga0157342_1040616All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium622Open in IMG/M
3300012896|Ga0157303_10012356All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1313Open in IMG/M
3300012901|Ga0157288_10041623All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1023Open in IMG/M
3300012914|Ga0157297_10135861Not Available784Open in IMG/M
3300012914|Ga0157297_10177015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium718Open in IMG/M
3300012958|Ga0164299_10130680All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1359Open in IMG/M
3300012958|Ga0164299_10743435All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium692Open in IMG/M
3300012961|Ga0164302_10232964All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1157Open in IMG/M
3300012989|Ga0164305_11447336All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium607Open in IMG/M
3300014657|Ga0181522_10699064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium619Open in IMG/M
3300014745|Ga0157377_10202527All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1261Open in IMG/M
3300015371|Ga0132258_11085019All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2024Open in IMG/M
3300015371|Ga0132258_12722873All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1233Open in IMG/M
3300015371|Ga0132258_13362749All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1099Open in IMG/M
3300015373|Ga0132257_102836246All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium632Open in IMG/M
3300015373|Ga0132257_103788494All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium550Open in IMG/M
3300015374|Ga0132255_101282064All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1105Open in IMG/M
3300015374|Ga0132255_102270485All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium828Open in IMG/M
3300017792|Ga0163161_10174074All Organisms → cellular organisms → Bacteria1647Open in IMG/M
3300017792|Ga0163161_11883718All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium532Open in IMG/M
3300017965|Ga0190266_10941877All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria571Open in IMG/M
3300017974|Ga0187777_11034457All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria595Open in IMG/M
3300018027|Ga0184605_10325940All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria694Open in IMG/M
3300018053|Ga0184626_10441437All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria513Open in IMG/M
3300022883|Ga0247786_1165228All Organisms → cellular organisms → Bacteria503Open in IMG/M
3300023102|Ga0247754_1035916All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1125Open in IMG/M
3300023266|Ga0247789_1127840All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium522Open in IMG/M
3300025899|Ga0207642_10680355Not Available647Open in IMG/M
3300025901|Ga0207688_10194038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1216Open in IMG/M
3300025908|Ga0207643_10084254All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1845Open in IMG/M
3300025908|Ga0207643_10086144All Organisms → cellular organisms → Bacteria1825Open in IMG/M
3300025914|Ga0207671_11564725All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria508Open in IMG/M
3300025917|Ga0207660_10295835All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1288Open in IMG/M
3300025921|Ga0207652_10624261All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium965Open in IMG/M
3300025924|Ga0207694_11625276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria544Open in IMG/M
3300025927|Ga0207687_10713743All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium852Open in IMG/M
3300025927|Ga0207687_11156972All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria665Open in IMG/M
3300025935|Ga0207709_11690143All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium526Open in IMG/M
3300025936|Ga0207670_10786828All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium792Open in IMG/M
3300025937|Ga0207669_11021450All Organisms → cellular organisms → Bacteria → Terrabacteria group695Open in IMG/M
3300025940|Ga0207691_11386965All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria578Open in IMG/M
3300025942|Ga0207689_10605855All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium921Open in IMG/M
3300025944|Ga0207661_10123105All Organisms → cellular organisms → Bacteria2211Open in IMG/M
3300025981|Ga0207640_11446362All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium617Open in IMG/M
3300026041|Ga0207639_10403748All Organisms → cellular organisms → Bacteria → Terrabacteria group1231Open in IMG/M
3300026067|Ga0207678_10493609All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1067Open in IMG/M
3300026116|Ga0207674_10288169All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1591Open in IMG/M
3300026116|Ga0207674_10295664All Organisms → cellular organisms → Bacteria1568Open in IMG/M
3300026121|Ga0207683_10434764All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1209Open in IMG/M
3300026142|Ga0207698_12150679All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria571Open in IMG/M
3300026960|Ga0207582_1013708All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium736Open in IMG/M
3300027866|Ga0209813_10100551All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium983Open in IMG/M
3300027880|Ga0209481_10189346All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1026Open in IMG/M
3300027882|Ga0209590_10541449All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium751Open in IMG/M
3300028587|Ga0247828_10007759Not Available3855Open in IMG/M
3300028589|Ga0247818_10993049All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium593Open in IMG/M
3300028812|Ga0247825_10664801All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium748Open in IMG/M
3300028812|Ga0247825_11295058All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium533Open in IMG/M
3300028889|Ga0247827_10507987All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium755Open in IMG/M
3300029957|Ga0265324_10262156All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium587Open in IMG/M
3300031235|Ga0265330_10184784All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium883Open in IMG/M
3300031543|Ga0318516_10845767All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300031731|Ga0307405_12057127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium512Open in IMG/M
3300031854|Ga0310904_10960485All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria607Open in IMG/M
3300031858|Ga0310892_10386190All Organisms → cellular organisms → Bacteria908Open in IMG/M
3300031940|Ga0310901_10099141All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1049Open in IMG/M
3300031940|Ga0310901_10192013All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium809Open in IMG/M
3300032003|Ga0310897_10492604All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium593Open in IMG/M
3300032012|Ga0310902_10581297All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria741Open in IMG/M
3300032012|Ga0310902_11153425All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria544Open in IMG/M
3300032017|Ga0310899_10184879All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium913Open in IMG/M
3300032075|Ga0310890_10007744All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4922Open in IMG/M
3300032075|Ga0310890_11193162All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium619Open in IMG/M
3300032783|Ga0335079_10118611All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2988Open in IMG/M
3300033290|Ga0318519_10632949All Organisms → cellular organisms → Bacteria651Open in IMG/M
3300033550|Ga0247829_10027854All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3719Open in IMG/M
3300033550|Ga0247829_10134146All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1911Open in IMG/M
3300033551|Ga0247830_11351725All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium569Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil13.14%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere8.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.57%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere6.57%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere5.11%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere5.11%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.11%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere5.11%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.38%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.92%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.19%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.19%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.19%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.46%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.46%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.46%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere1.46%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.46%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.46%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.73%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.73%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.73%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.73%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.73%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.73%
Rice Paddy SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil0.73%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.73%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.73%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.73%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.73%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.73%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.73%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.73%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.73%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.73%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.73%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.73%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003993Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2EnvironmentalOpen in IMG/M
3300003998Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2EnvironmentalOpen in IMG/M
3300003999Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005185Soil and rhizosphere microbial communities from Laval, Canada - mgHPBEnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005341Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005367Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005873Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301EnvironmentalOpen in IMG/M
3300006051Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006575Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006580Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011107Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012507Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610Host-AssociatedOpen in IMG/M
3300012896Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2EnvironmentalOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012914Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300014657Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaGEnvironmentalOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017965Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 TEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300022883Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4EnvironmentalOpen in IMG/M
3300023102Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5EnvironmentalOpen in IMG/M
3300023266Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025935Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025942Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026116Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026960Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A5-10 (SPAdes)EnvironmentalOpen in IMG/M
3300027866Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027880Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300029957Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaGHost-AssociatedOpen in IMG/M
3300031235Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaGHost-AssociatedOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031858Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2EnvironmentalOpen in IMG/M
3300031940Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10373371323300000956SoilKSGIGWHHFWIVFAVVGWALAMLIGIAFVGPELGRIDQAAQEFGPESPEVGRRVKRLFTIFRFDTALLILVVVDMVAKPSF*
JGI10216J12902_11185466823300000956SoilPTLVVTLVFGVILMEKGNFDWGQFWVIFALVGWTIAAVVGVAFVGPELGRIDEAARTHGPDSAEVAQRVRRLFMIFRFDTALLLLIVVNMAAKPSF*
Ga0055468_1003745713300003993Natural And Restored WetlandsMDRYARLHTGALRTLVFGIALMVEGDLDWGQFWVLFGLIGWVIAAVVGVGFVGPELGRIDEAARTHGPDSVEVGRRVRRLFMIFRFDTALLMLIVINMAAKPSF*
Ga0055472_1001148933300003998Natural And Restored WetlandsLVFGIILMQKGNFDWGQFWVLFALVGWTIAAVVGVGFVGPELGRIDEAVRTYGPDSPEIAMRVRRLFMIFRFDTALLVLIVVNMAAKPSF*
Ga0055469_1006160013300003999Natural And Restored WetlandsMVEGDLDWGQFWVLFGLIGWVIAAVVGVGFVGPELGRIDEAARTHGPDSVEVGRRVRRLFMIFRFDTALLMLIVINMAAKPSF*
Ga0062593_10056732733300004114SoilLGALGRMGAWIGTRVYTPTLVVTLVFGIILMQKGNFDWGQFWVVFALVGWTVAAVVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFTIFRFDTALLVLIVVNMAAKPSF*
Ga0062589_10190509713300004156SoilGALGRMGAWIGTRVYTPTLVVTLVFGIILMQKGNFDWGEFWVIFALVGWTIAALVGVGFVGPELGRIDEAARTHGPESPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF*
Ga0062595_10251031823300004479SoilFWIVFAVVGWALAMLIGIAFVGPELGRIDQAAQEFGPESPEVGRRVKRLFTIFRFDTALLILVVIDMAAKPSF*
Ga0066809_1010227913300005168SoilHDYNQFWVIFGLVGWVVAAVIGVGFVGPELGRIDEAARAHGPDSPEVGRRVKRLFMIFRFDTVLLILIVVDMAAKPGL*
Ga0066811_103063623300005185SoilGWGQFWIDFALVGWAIAAAVGVLFVGPELGRIDEAAQKHGPESEEVRRRVNRLFMIFRFDTVLLILIVVDMAAKPGL*
Ga0070683_10014985653300005329Corn RhizosphereTPTLVVTLVFGIILMQKGNFDWGEFWVIFALVGWTIAALVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFTIFRFDTVLLLLIVVNMAAKPSF*
Ga0068869_10182825023300005334Miscanthus RhizosphereLGRMGAWIGTRVYTPTLVVTLVFGIILMQKGNFGWGEFWVIFALVGWTIAALVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFTIFRFDTVLLLLIVVNMAAKPSF*
Ga0070682_10105939413300005337Corn RhizospherePTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTVAALVGVGFVGPELGRIDEAVRMHGPESPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0070682_10111442523300005337Corn RhizosphereYTPTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0068868_10054399333300005338Miscanthus RhizosphereFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0070691_1073434613300005341Corn, Switchgrass And Miscanthus RhizosphereGETLGALGRMGAWIGTRVYTPTLVVTLVFGVILMEKGNFDWGQFWVIFALVGWTIAAVVGVAFVGPELGRIDEAARTHGPDSAEVAQRVRRLFMIFRFDTALLLLIVVNMAAKPSF*
Ga0070669_10043097413300005353Switchgrass RhizosphereLMQKGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0070674_10046587833300005356Miscanthus RhizosphereQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0070667_10043670023300005367Switchgrass RhizosphereWGQFWVIFALVGWAIAAVVGVAFVGPELGRIDEAARTHGPDSPEVALRVKRLFTIFRFDTVLLLLIVVNMAAKPSF*
Ga0070700_10181255513300005441Corn, Switchgrass And Miscanthus RhizosphereGWNHFWIIFAVVGWTLAMLIGIGFVGPELGRIDKAAQEFGPESPEVGRRVKRLFTIFRFDTALLILVVIDMAAKPSF*
Ga0070708_10052211913300005445Corn, Switchgrass And Miscanthus RhizosphereWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0070681_1014332333300005458Corn RhizosphereWVIFALVGWTIAAVVGVAFVGPELGRIDEAARTHGPDSAEVAQRVRRLFMIFRFDTALLVLIVVNMAAKPSF*
Ga0070684_10017646113300005535Corn RhizosphereMGAWIGTRVYTPTLVVTLVFGIILMQKGNFEWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0070684_10022572833300005535Corn RhizosphereRGEGETLGALGRMGAWIGTRVYTPTLVVTLVFGVILMEKGNFDWGQFWVIFALVGWTIAAVVGVAFVGPELGRIDEAARTHGPDSAEVAQRVRRLFMIFRFDTALLLLIVVNMAAKPSF*
Ga0070684_10181408913300005535Corn RhizosphereVFERRGEGETLGALGRMGAWIGTRVYTPTLVVTLVFGIILMQKGNFDWGEFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFTIFRFDTVLLLLIVVNMAAKPSF*
Ga0070684_10225224623300005535Corn RhizosphereVEGDLDWSQFWVLFGLVGWAIAAVVGVGFVGPELGRIDEAARTHGPESVEVARRVRRLFMIFRFDTALLMLIVINMAVKPSF*
Ga0068853_10032448133300005539Corn RhizosphereKGNFDWGEFWVIFALVGWTIAAIVGVAFVGPELGRIDEAARTHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF*
Ga0066699_1059417023300005561SoilVFWIDFALAGWAIAATVGVGFVGPELGRIDEAAQVYGPDSPEVARRVKRLFTIFRFDTALLALIVIDMAAKPSF*
Ga0068854_10031245613300005578Corn RhizosphereVILMQKGNFDWGQFWVIFALVGWTIAAVVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF*
Ga0068861_10252352313300005719Switchgrass RhizosphereTPTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTVAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0068870_1137403713300005840Miscanthus RhizosphereILMQKGNFDWGQFWVIFALVGWAIAAVVGVAFVGPELGRIDEAARTHGPDSPEVALRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0075287_106455913300005873Rice Paddy SoilGRMGAWIGTRVYTPTLVVTLVFGVILMQKGNFDWGQFWVLFALVGWTIAAVVGVGFVGPELGRIDEAVRTYGPDSPEIAMRVSRLFMFFRFDTALLVLIVVNMAAKPSF*
Ga0075364_1004429543300006051Populus EndosphereQFWVIFALVGWTIAAVVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF*
Ga0075432_1056794813300006058Populus RhizosphereLMQKGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTALLLLIVVNMAAKPSF*
Ga0068871_10176160713300006358Miscanthus RhizosphereALGRMGAWIGTRVYTPTLVVTLVFGVILMEKGDFDWGQFWVIFALVGWTIAAVVGVAFVGPELGRIDEAARTHGPDSAEVAQRVRRLFMIFRFDTALLVLIVVNMAAKPSF*
Ga0074053_1185062813300006575SoilTPALFAVLAFGIALVEKGNFGWGQFWIDFALVGWAIAATIGVGFVGPELGRIDRAAQEHGPESDEVRRRINRLFVVFRFDTVLLILIVVDMAAKPGL*
Ga0074049_1278961123300006580SoilVQKANIPWDQFWITFALVGWTLATVIGVAFVGPELGRIDRAAQEFGPESPEVARRVKRLFTIFRFDTAMLVLVVIDMAAKPTF*
Ga0075421_10019144233300006845Populus RhizosphereETLGALGRMGAWIGTRVYTPTLVVTLVFGVILMEKGNFDWGEFWVIFALVGWTIAAIVGVGFVGPELGRIDEAARAHGPDSPEVAMRVKRLFIIFRFDTALLVLIVVNMAAKPSF*
Ga0111539_1177478313300009094Populus RhizosphereQKGNFDWGQFWVIFALVGWAIAAVVGVAFVGPELGRIDEAARTHGPDSPEVAVRVKRLFTIFRFDTVLLLLIVVNMAAKPSF*
Ga0111539_1188127313300009094Populus RhizospherePTLVVTLVFGIILMQKGNFDWGEFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFTIFRFDTVLLLLIVVNMAAKPSF*
Ga0105245_1081662723300009098Miscanthus RhizosphereLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTVAALVGVGFVGPELGRIDEAVRMHGPESPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0105245_1097637713300009098Miscanthus RhizosphereGIGWNHFWVIFGIVGWSLAMAIGIAFVGPELGRIDRAAQEHGPESPEVGRRVKRLFLIFRFDTALLILVVIDMTAKPSF*
Ga0066709_10060285133300009137Grasslands SoilVALMEKSPLRPQWDQFWVLFAVVGWSLAATIGISFVGPELGRIGQAAATLGPDSPEVARRVKRLFTIFRFDTALLALIVIDMAAKPTF*
Ga0114129_1274695713300009147Populus RhizosphereLVFGVILMQKGSFDWGQFWVIFALVGWTIAAVVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF*
Ga0105243_1112235023300009148Miscanthus RhizosphereALGRMGAWIGTRVYTPTLVVTLVFGIILMQKGNFDWGEFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFTIFRFDTVLLLLIVVNMAAKPSF*
Ga0111538_1080869913300009156Populus RhizosphereTPTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0105237_1146203123300009545Corn RhizosphereVTLVFGIILMQKGNFDWGQFWVIFALVGWTIAAVVGVAFVGPELGRIDEAARTHGPDSAEVAQRVRRLFMIFRFDTALLLLIVVNMAAKPSF*
Ga0105249_1215601223300009553Switchgrass RhizosphereFGIILMQKGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0134084_1040937123300010322Grasslands SoilVVLIEKGHWGWDTFFIDFAIAGWAIATLVGVGFVGPELGRIDKAAVEHGPNSPEVARRVKRLFLVFRFDTALLVLIAIDMAAKPSF*
Ga0126377_1233116513300010362Tropical Forest SoilETLGALGRMGAWIGTRVYTPTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWAIAALVGVGFVGPELGRIDEAARTHGPESPEVAMRVKRLFMIFRFDTALLLLIVVNMAAKPSF*
Ga0134125_1248381313300010371Terrestrial SoilLMQKGNFDWGQFWVIFALVGWAIAAVVGVAFVGPELGRIDEAARTHGPDSPEVALRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0105239_1001433113300010375Corn RhizosphereVTLVFGVILMQKGNFDWGQFWVIFALVGWAIAAVVGVAFVGPELGRIDEAARTHGPDSPEVALRVKRLFTIFRFDTVLLLLIVVNMAAKPSF*
Ga0105239_1065523313300010375Corn RhizosphereIGWNHFWIVFAVVGWALAMLVGIAFVGPELGRIDRAAHEFGPESPEVGRRVKRLFAIFRFDTALLILVVVDMTAKPSF*
Ga0134123_1328730523300010403Terrestrial SoilVFGVILMEKGNFDWGEFWVIFALVGWTIAAIVGVGFVGPELGRIDEAARAHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF*
Ga0151490_149202123300011107SoilQKGNFEWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0151490_172508023300011107SoilFAVLAFGIALVEKGNIGWGQFWIDFALVGWAIAAAVGVLFVGPELGRIDEAAQKHGPESEEVRRRVNRLFMIFRFDTVLLILIVVDMAAKPGL*
Ga0105246_1014730013300011119Miscanthus RhizosphereVFGIILMQKGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0105246_1021051413300011119Miscanthus RhizosphereTPTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTVAALVGVGFVGPELGRIDEAVRMHGPESPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0105246_1047562723300011119Miscanthus RhizosphereSGIGWNHFWIVFAIVGWALAMLIGIGFVGPELGRIDRAAQEFGPESPEVGRRVKRLFTIFRFDTALLILVVIDMAAKPSF*
Ga0157342_104061613300012507Arabidopsis RhizosphereGEGETLGALGRMGAWIGTRVYTPTLVVTLVFGVILMQKGNFDWGQFWVIFALAGWATAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0157303_1001235623300012896SoilLMQKGNFDWGQFWVIFALVGWTIAAVVGVAFVGPELGRIDEAVRTHGPDSPEVALRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0157288_1004162323300012901SoilIGTRVYTPTLVVTLVFGIILMQKGNFDWGEFWVIFALVGWTIAALVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFTIFRFDTVLLLLIVVNMAAKPSF*
Ga0157297_1013586123300012914SoilWGQFWVIFALVGWTIAAVVGVAFVGPELGRIDEAARTHGPDSAEVAQRVRRLFMIFRFDTALLLLIVVNMAAKPSF*
Ga0157297_1017701533300012914SoilVVTLVFGVILMQKGNFDWGQFWVIFALVGWAIAAVVGVAFVGPELGRIDEAARTHGPDSPEVAVRVKRLFTIFRFDTVLLLLIVVNMAAKPSF*
Ga0164299_1013068013300012958SoilLMQKGNFDWGQFWVIFALVGWTIAAAVGVGFVGPELGRIDEAARTHGPESPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF*
Ga0164299_1074343523300012958SoilVYTPALFVTLAFVIALMVEGDLDWSQFWVLFGLIGWTIAAVVGVGFVGPELGRIDEAARTYGPESVEVARRVGRLFMIFRFDTALLMLIVINMAVKPSF*
Ga0164302_1023296423300012961SoilVVTLVFGISLIQKGTFDWGQFWVIFALVGWTIAALVGVGFVGPGLGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0164305_1144733613300012989SoilETLGALGRMGAWIGTRVYTPTLVVTLVFGVILMEKGNFDWGQFWVIFALVGWTIAAVVGVAFVGPELGRIDEAARTHGPDSAEVAQRVRRLFMIFRFDTALLLLIVVNMAAKPSF*
Ga0181522_1069906413300014657BogHFWIDFALAGWAVAASVGVGFVGPELGRIGRAAAELGPDSPEVGRRVKRLFMIFRYQTALLAMIVVDMAAKPSF*
Ga0157377_1020252713300014745Miscanthus RhizosphereDWGELWVIFALVGWTIAAIVGVAFVGPELGRIDEAARTHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF*
Ga0132258_1108501933300015371Arabidopsis RhizosphereIILMQKGNFDWGQFWVIFALVGWTIAAVVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF*
Ga0132258_1272287323300015371Arabidopsis RhizosphereVTLVFGVILMEKGNFDWGEFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFTIFRFDTVLLLLIVVNMAAKPSF*
Ga0132258_1336274923300015371Arabidopsis RhizosphereYTPILFIVIAFGIAVMHETHQDYGQFWVIFGLIGWAAATCIGIGFVGPELGRIDEAARTHGPQSPEVMARVKRLFMIFRFDTALLILIVIDMTARPFS*
Ga0132257_10283624623300015373Arabidopsis RhizosphereIGTRVYTPALFVTLAFGIALMVEGDLDWGQFWVVFGLVGWAIAAVVGVGFVGPELGRIDEAARTHGPDSAEVARRVQRLFMIFRFDTALLMLIVLNMATKPSF*
Ga0132257_10378849413300015373Arabidopsis RhizosphereLGALGRMGAWIGTRVYTPTLVVTLVFGIILMQKGNFEWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF*
Ga0132255_10128206433300015374Arabidopsis RhizosphereVVTLVFGVILMEKGNFDWGEFWVIFALVGWTIAAVVGVGFVGPELGRIDEAARPHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF*
Ga0132255_10227048513300015374Arabidopsis RhizosphereTPTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTVAALVGVGFVGPELGRIDEAARTHGPDSPEVAVRVKRLFTIFRFDTVLLLLIVVNMAAKPSF*
Ga0163161_1017407413300017792Switchgrass RhizospherePTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0163161_1188371813300017792Switchgrass RhizosphereTRVYTPTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTVAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFTIFRFDTVLLLLIVVNMAAKPSF
Ga0190266_1094187713300017965SoilTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDAAARMHGPDSPEVAMRVKRLFMIFRFDTALLLLIVVNMAAKPSF
Ga0187777_1103445723300017974Tropical PeatlandGLGWGTFWIDFGIAGWAVATVVGVGFVGPELGRIDKAAQEFGPDSPEVGRRVKRLFAVFRFDTALLILIAIDMTAKPFS
Ga0184605_1032594023300018027Groundwater SedimentGWDSFWIDFALVGWAIAATAGVGFVGPELGRIDRAAQAFGPDSPEVRHRVARLFTIFRLETALLVLIVIDMTAKPSF
Ga0184626_1044143723300018053Groundwater SedimentLFVTIAFGVALMLEADLDWGQFWVIFGLVGWAIAAVIGVGFVGPELGRIDEAARSHGPDSEEVALRVKRLFMIFRFDTALLVLIVIDMSAKPFA
Ga0247786_116522823300022883SoilIGWHHFWIVFAVVGWALAMLIGIAFVGPELGRIDQAAQEFGPESPEVGRRVKRLFTIFRFDTALLILVVIDMAAKPSF
Ga0247754_103591613300023102SoilFWVIFALVGWAIAAVVGVAFVGPELGRIDEAARTHGPDSPEVALRVKRLFTIFRFDTVLLLLIVVNMAAKPSF
Ga0247789_112784013300023266SoilWGEFWVIFALVGWTIAAIVGVGFVGPELGRIDEAARAHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF
Ga0207642_1068035523300025899Miscanthus RhizosphereWIDFALAGWLVAGLVGVGFVGPELGRIDKAAMEFGPMSEEVGRRVKRLFMVFRFDTALLVLIVIDMVAKPSF
Ga0207688_1019403813300025901Corn, Switchgrass And Miscanthus RhizosphereVYTPTLVVTLVFGIILMQKGNFDWGEFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFTIFRFDTVLLLLIVVNMAAKPSF
Ga0207643_1008425413300025908Miscanthus RhizosphereTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTVAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0207643_1008614413300025908Miscanthus RhizosphereTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0207671_1156472523300025914Corn RhizosphereLMQKGNFDWGQFWVIFALVGWTIAAVVGVAFVGPELGRIDEAARTHGPDSAEVAQRVRRLFMIFRFDTALLLLIVVNMAAKPSF
Ga0207660_1029583523300025917Corn RhizosphereWGQFWVIFALVGWAIAAVVGVAFVGPELGRIDEAARTHGPDSPEVALRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0207652_1062426113300025921Corn RhizosphereGALGRMSAWIGTRVYTPTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0207694_1162527623300025924Corn RhizosphereIGTRVYTPTLVVTLVFGVILMEKGTFDWGEFWVIFALVGWTIAAIVGVAFVGPELGRIDEAARTHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF
Ga0207687_1071374323300025927Miscanthus RhizosphereGQFWVIFALVGWTVAALVGVGFVGPELGRIDEAVRMHGPESPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0207687_1115697223300025927Miscanthus RhizosphereMQKGNFDWGQFWVIFALVGWTIAAVVGVAFVGPELGRIDEAARTHGPDSPEVAQRVKRLFMIFRFDTALLVLIVVNMVAKPSF
Ga0207709_1169014313300025935Miscanthus RhizosphereGIVFERRGEGETLGALGRMGAWIGTRVYTPTLVVTLVFGIILMQKGNFDWGEFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFTIFRFDTVLLLLIVVNMAAKPSF
Ga0207670_1078682813300025936Switchgrass RhizosphereLVVTLVFGVILMEKGNFDWGQFWVIFALVGWTIAAVVGVAFVGPELGRIDEAARTHGPDSAEVAQRVRRLFMIFRFDTALLLLIVVNMAAKPSF
Ga0207669_1102145013300025937Miscanthus RhizosphereQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0207691_1138696513300025940Miscanthus RhizosphereFGVILMQKGNFDWGQFWVIFALVGWTIAAVVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF
Ga0207689_1060585523300025942Miscanthus RhizosphereVYTPTLVVTLVFGVILMQKGNFDWGQFWVIFALVGWTIAAVVGVAFVGPELGRIDEAARTHGPDSAEVAQRVRRLFMIFRFDTALLVLIVVNMAAKPSF
Ga0207661_1012310553300025944Corn RhizosphereTPTLVVTLVFGIILMQKGNFDWGEFWVIFALVGWTIAALVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFTIFRFDTVLLLLIVVNMAAKPSF
Ga0207640_1144636213300025981Corn RhizosphereTLVFGIILMQKGNFDWGEFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFTIFRFDTVLLLLIVVNMAAKPSF
Ga0207639_1040374813300026041Corn RhizosphereNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0207678_1049360913300026067Corn RhizosphereTPTLVVTLVFGVILMQKGNFDWGQFWVIFALVGWTIAAVVGVAFVGPELGRIDEAARTHGPDSAEVAQRVRRLFMIFRFDTALLLLIVVNMAAKPSF
Ga0207674_1028816933300026116Corn RhizosphereTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF
Ga0207674_1029566413300026116Corn RhizosphereTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTVAALVGVGFVGPELGRIDEAVRMHGPESPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0207683_1043476413300026121Miscanthus RhizosphereLVVTLVFGIILMHKGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0207698_1215067913300026142Corn RhizosphereMEKGNFDWGEFWVIFALVGWTIAAIVGVGFVGPELGRIDEAARAHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF
Ga0207582_101370823300026960SoilMGAWIGTRVYAPTLVVTLVFAIILMQKGNFDWGQFWVIFALVGWTIAAVVGVAFVGPELGRIDEAARTHGPDSPEVAMRVKRLFTIFRFDTVLLLLIVVNMAAKPSF
Ga0209813_1010055123300027866Populus EndosphereRMGAWIGTRVYTPTLVVTLVFGVILMQKGNFDWGQFWVIFALVGWTIAAVVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF
Ga0209481_1018934623300027880Populus RhizosphereGVILMEKGNFDWGEFWVIFALVGWTIAAIVGVGFVGPELGRIDEAARAHGPDSPEVAMRVKRLFIIFRFDTALLVLIVVNMAAKPSF
Ga0209590_1054144913300027882Vadose Zone SoilLGVALIQKGQYPWDVFWIDFALVGWAVAATVGVGFVGPELGRIDAAAGRRGPNSEEVRRRVRRLFTIFRFDTALLILIVLDMTAKPSF
Ga0247828_1000775913300028587SoilLMEKGNFDWGEFWVIFALVGWTIAAIVGVAFVGPELGRIDEAARTHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF
Ga0247818_1099304913300028589SoilDWGQFWVIFALVGWTVAALVGVGFVGPELGRIDEAARMHGPESPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0247825_1066480113300028812SoilVLGIVFERRGEGETLGALGRMGAWIGTRVYTPTLVVTLVFGIILMQKGNFDWGEFWVIFALVGWTIAALVGVGFVGPELGRIDEAARAHGPDSHEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0247825_1129505823300028812SoilFGIILMQKGNFDWGQFWVIFALVGWTIAAVVGVGFVGPELGRIDEAARLHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF
Ga0247827_1050798713300028889SoilQKGNFDWGEFWVIFALVGWTIAALVGVGFVGPELGHIDEAARAHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0265324_1026215613300029957RhizosphereAVVEKGGWGWGQVWIDFALGGWAVAAGVGVLFVGPELGRIDEAATEFGPQSEQVARRVQRLFTVFRFDTVLLILIVLDMTLKPAF
Ga0265330_1018478423300031235RhizosphereWGWGQVWIDFALGGWAVAAGVGVLFVGPELGRIDEAATEFGPQSEQVARRVQRLFTVFRFDTVLLILIVLDMTLKPAF
Ga0318516_1084576713300031543SoilKGEWPWDLFWVDFALVGWTIAALVGVGFVGPELGRIDRAAREHGPESEEVRRRVKRLFAVFRFDTALLVLIVLVMTAKPTF
Ga0307405_1205712713300031731RhizosphereGQFWVIFALVGWTIAAVVGVAFVGPELGRIDEAARAHGPDSPEVAMRVKRLFTIFRFDTVLLLLIVVNMAAKPSF
Ga0310904_1096048523300031854SoilDWGEFWVIFALVGWTIAALVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFMIFRFDTALLLLIVVNMAAKPSF
Ga0310892_1038619013300031858SoilMPQGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0310901_1009914113300031940SoilTLVFGVILMQKGNFDWGQFWVIFALVGWTIAAVVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFIIFRFDTALLVLIVVNMAAKPSF
Ga0310901_1019201313300031940SoilTRVYTPTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0310897_1049260413300032003SoilKGNFDWGEFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0310902_1058129713300032012SoilETLGALGRMGAWIGTRVYTPTLVVTLVFGVILMEKGNFDWGEFWVIFALVGWTIAAIVGVGFVGPELGRIDEAARAHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF
Ga0310902_1115342513300032012SoilGEGETLGALGRMGAWIGTRVYTPTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTALLLLIVVNMAAKPSF
Ga0310899_1018487913300032017SoilIGTRVYTPTLVVTLVFGIILMQKGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0310890_1000774413300032075SoilVILMEKGNFDWGELWVIFALVGWTIAAIVGVAFVGPELGRIDEAARTHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF
Ga0310890_1119316223300032075SoilVVTLVFGVILMQKGNFDWGQFWVIFALVGWTIAAVVGVGFVGPELGRIDEAARTHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF
Ga0335079_1011861143300032783SoilVAMIEKGGLGWGTFWIDFGIAGWCVASVVGVGFVGPELGRIDEAAQAYGPDSAEVGRRVKRLFTVFRFDTALLLLIVIDMTAKPFS
Ga0318519_1063294913300033290SoilIAMVEKGQLGWNQFWIDFALAGWAVAAVVGVAFVGPELGRIDAAAAAHGPDSPEVARRVRRLFTVFRFDTALLVLIVVDMAAKPSF
Ga0247829_1002785443300033550SoilCWGSCSSGAARGEFWVIFALVGWTIAALVGVGFVGPELGRIDEAARAHGPDSPEVAMRVKRLFMIFRFDTVLLLLIVVNMAAKPSF
Ga0247829_1013414623300033550SoilIILMQKGNFDWGQFWVIFALVGWTIAAVVGVGFVGPELGRIDEAARLHGPDSPEVAMRVKRLFMIFRFDTALLVLIVVNMAAKPSF
Ga0247830_1135172513300033551SoilILMQKGNFDWGQFWVIFALVGWTIAALVGVGFVGPELGRIDEAARMHGPDSPEVATRVKRLFTIFRFDTVLLLLIVVNMAAKPSF

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.