Metagenome / Metatranscriptome Family F056689

Basic Information
Family ID	F056689
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	99 residues
Representative Sequence	VVKYGGHQWRHWAHPEFSRPVYYWNWAIVRSVTCIAEDSYGDQYPVTEATFSGFGLVNMTAVEDDALDRCAEESGGDQSCYLATCSHF
Number of Associated Samples	112
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere (13.139 % of family members)
Environment Ontology (ENVO)	Unclassified (34.307 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (35.766 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.52% β-sheet: 18.10% Coil/Unstructured: 66.38%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
d.240.1.1: Lesion bypass DNA polymerase (Y-family), little finger domain	d1jiha1	1jih	0.63027
d.240.1.1: Lesion bypass DNA polymerase (Y-family), little finger domain	d1unnc1	1unn	0.62922
d.240.1.1: Lesion bypass DNA polymerase (Y-family), little finger domain	d3gv7b2	3gv7	0.59933
d.252.1.1: CheC-like	d1squa_	1squ	0.59914
f.69.1.1: Perfringolysin N-terminal-like	d1pfoa1	1pfo	0.59775

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF14255	Cys_rich_CPXG	5.84
PF04679	DNA_ligase_A_C	2.92
PF00106	adh_short	2.19
PF02321	OEP	1.46
PF00072	Response_reg	0.73
PF01195	Pept_tRNA_hydro	0.73
PF12802	MarR_2	0.73
PF08281	Sigma70_r4_2	0.73
PF05598	DUF772	0.73
PF13459	Fer4_15	0.73
PF01741	MscL	0.73
PF13602	ADH_zinc_N_2	0.73
PF00544	Pectate_lyase_4	0.73
PF03886	ABC_trans_aux	0.73
PF05199	GMC_oxred_C	0.73
PF04187	Cofac_haem_bdg	0.73
PF00722	Glyco_hydro_16	0.73
PF04909	Amidohydro_2	0.73
PF00210	Ferritin	0.73
PF02230	Abhydrolase_2	0.73
PF02518	HATPase_c	0.73
PF08386	Abhydrolase_4	0.73
PF06863	DUF1254	0.73
PF04205	FMN_bind	0.73
PF00857	Isochorismatase	0.73
PF01544	CorA	0.73
PF13538	UvrD_C_2	0.73
PF04185	Phosphoesterase	0.73
PF03625	DUF302	0.73
PF07732	Cu-oxidase_3	0.73
PF00849	PseudoU_synth_2	0.73
PF00300	His_Phos_1	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG1538	Outer membrane protein TolC	Cell wall/membrane/envelope biogenesis [M]	2.92
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.92
COG0193	Peptidyl-tRNA hydrolase	Translation, ribosomal structure and biogenesis [J]	0.73
COG0564	Pseudouridine synthase RluA, 23S rRNA- or tRNA-specific	Translation, ribosomal structure and biogenesis [J]	0.73
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.73
COG1187	Pseudouridylate synthase RsuA, specific for 16S rRNA U516 and 23S rRNA U2605	Translation, ribosomal structure and biogenesis [J]	0.73
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.73
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.73
COG1970	Large-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.73
COG2132	Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)	Cell cycle control, cell division, chromosome partitioning [D]	0.73
COG2273	Beta-glucanase, GH16 family	Carbohydrate transport and metabolism [G]	0.73
COG2303	Choline dehydrogenase or related flavoprotein	Lipid transport and metabolism [I]	0.73
COG3016	Putative heme-binding protein PhuW	General function prediction only [R]	0.73
COG3439	Uncharacterized conserved protein, DUF302 family	Function unknown [S]	0.73
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.73
COG3866	Pectate lyase	Carbohydrate transport and metabolism [G]	0.73
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.73

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.64%
Host-Associated	Host-Associated	23.36%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	64.96%
Plants	Host-Associated → Plants	23.36%
Aquatic	Environmental → Aquatic	11.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.09%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.52%
Peat	Environmental → Terrestrial → Peat	13.87%
Freshwater	Environmental → Aquatic → Freshwater	10.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.11%
Sediment	Environmental → Aquatic → Sediment	1.46%
Roots	Host-Associated → Plants → Roots	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	25.55%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	13.87%
Soil	Host-Associated → Plants → Rhizosphere → Soil	13.87%
Loam	Environmental → Terrestrial → Soil → Loam	11.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.49%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.46%
Lake	Environmental → Aquatic → Freshwater → Lake	0.73%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.73%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.33%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	13.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	13.87%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.49%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	8.76%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	6.57%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.38%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.19%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.46%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.46%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.73%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.73%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.73%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	13.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.95%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	6.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.11%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.11%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	4.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.38%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.38%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.65%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	3.65%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.92%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.19%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.19%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.19%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.46%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.46%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.73%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.73%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.73%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.73%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.73%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918008	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_all	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005258	Microbial communities on the surface of bentonite enhanced biochar	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013503	Permafrost microbial communities from Nunavut, Canada - A23_5cm_12M	Environmental	Open in IMG/M
3300014151	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018030	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_100	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300019268	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300022528	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300023232	Peat soil microbial communities from Stordalen Mire, Sweden - IR.F.S.T0	Environmental	Open in IMG/M
3300024238	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T50	Environmental	Open in IMG/M
3300024240	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T25	Environmental	Open in IMG/M
3300025544	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026450	Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T25	Environmental	Open in IMG/M
3300026451	Peat soil microbial communities from Stordalen Mire, Sweden - P.F.S.T-25	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300028556	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG	Host-Associated	Open in IMG/M
3300028563	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG	Host-Associated	Open in IMG/M
3300028774	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E2_3	Environmental	Open in IMG/M
3300028783	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_3	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028813	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_N3_3	Environmental	Open in IMG/M
3300029922	III_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300029954	I_Bog_N3 coassembly	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030519	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_3	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031235	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG	Host-Associated	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031238	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG	Host-Associated	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031595	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG	Host-Associated	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031711	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG	Host-Associated	Open in IMG/M
3300031712	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG	Host-Associated	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033743	Peat soil microbial communities from Stordalen Mire, Sweden - 714 E1 5-9	Environmental	Open in IMG/M
3300033798	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-S	Environmental	Open in IMG/M
3300033890	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-1-M	Environmental	Open in IMG/M
3300034124	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_06D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Bog_all_C_00162230	2140918008	Soil	MVRPHSIRVLQPTVAKYGGHQWRHWEHPEFSRPVYYWNWAVIRNVTCIAEDSYGDQYPVTEAAFSGFGLDNMTAVEDDALDRCAAESGGDPSCYLATCSHF
F14TC_1015750372	3300000559	Soil	VVMTDRPMRILSPKVVVHGQAGWRHWEHPMFRRPVYYWNWGALRNVTCTAEDSYGDQYPVTESTFPGFGLANMTAIEDDALDRCYAESGQDPSCVLLSCSQF*
JGIcombinedJ26739_1014883712	3300002245	Forest Soil	VAPRAVEHGRTGWAHWSHPDFARPAYYWDWNGVHNVTCISEDSYGDQYSVREAAAPGFGLANMTDVEDDALDRCYSESGQDTSCVLVGCTHI*
Ga0074071_10475312	3300005258	Soil	PMVRPHAVRVLKPSVARFGAHPWRHWEHPEFARPAYYWEFSNIHQISCIAEDSYGDQYPVTEDTFAGFGLIDMTSIEDDALDRCYQESGGDPSCYLASCSHF*
Ga0074071_10868531	3300005258	Soil	WEHAEFARPANYWDWAAIRQISCIAEDSYGDQYPVTEETFSGFGLVDMTAVEDDALDRCYQESGGDPSCYLASCSHF*
Ga0065704_105275831	3300005289	Switchgrass Rhizosphere	VVMHDRPMRLLSPRVIVHGQAGWTHWEHPMFRRPVYYWDWGAIRSVTCIGEDSYGDQYPVTESTFSGFGFANMTAVEDDALDRCYSESGQDPSCVLLSCSPY*
Ga0070683_1000637151	3300005329	Corn Rhizosphere	MIHRGAERPWRHWGHPEFVRPVYYWDWAQVHSVTCIAEDSYGDQYPVTQSTWGGFGLPDMTTVEDDALDRCYAESGGDQSCYLATCSHY*
Ga0070683_1003897541	3300005329	Corn Rhizosphere	TVHPHAVRVMRPHIAKYGVHPWHHWTHPEFVRPIYYWDWPRIRQVTCVAEDSYGDQYPVTEETFRGFGLINMSQVEDDALDRCYEESGNDASCFIATCSHF*
Ga0070683_1022168641	3300005329	Corn Rhizosphere	PHIAKFGVHPWHHWAHPEFVRPVYYWDWGHIRQVTCVAEDSYGDQYPVTEDTWRGFAISNMNDVEDDALDRCYQESGGDPSCFLATCSHN*
Ga0070660_1009395882	3300005339	Corn Rhizosphere	HPPGIHPHGPMVRPHAVRVLKPSVARFGAHPWRHWEHPEFARPAYYWEFSNIHQISCIAEDSYGDQYPVTEDTFAGFGLIDMTSVEDDALDRCYQESGGDPSCYLASCSHF*
Ga0070709_104111151	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	GVHPWHHWTHPEFVRPIYYWDWPRIRQVTCVAEDSYGDQYPVTEETFRGFGLINMSQVEDDALDRCYEESGNDASCFIATCSHF*
Ga0070713_1006001352	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRPTVVRRGERPWRRWEHPEFARPIYYWDWNQLHTVTCTAEDSYGDQYPVTETTFAGFGLGNMSYVEDDALDRCYQESGGDPNCFLATCSHY*
Ga0070710_100362481	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	RPEWHGPPPQVRNAERRPEPPRWQPHPTGVHPHGPMVRPHQVRVLRPQMVRYGAHPWRRWEHPVFARPAYFWDWPVVRQVTCVAEDSYGDQYPVTEDTWRGFGLHNMSDVEDDALDRCYQESGGDPSCFLATCSHF*
Ga0070710_115074702	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VHPWHHWAHPEFVRPIYYWDWGRIHQVTCVAEDSYGDQYPVTEETFRGFGLIQMSTVEDDTLDRCYEESGGDPSCFLATCSHF*
Ga0068855_1020269212	3300005563	Corn Rhizosphere	RGEPPRWQPHPPGAHPHGPMVRQHGVRVLRPVNVRYGARQWRHWEHPVFARPAYYWDWYAVRQVTCVAEDSYGDQYPVTEDTWRGFAISNMNDVEDDALDRCYQESGGDPSCFLATCSHN
Ga0068856_1023524121	3300005614	Corn Rhizosphere	RFQPHPPGARPHGPMVRQHPVRVMRPIIVRRGERPWRRWEHPEFARPVYYWDWNRIQTVTCTAEDSYGDQYPVTETTFAGFGLGNMSYVEDDALDRCYQESGGDPNCFLATCSHY*
Ga0070717_107214733	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRVLRPTVIRRGAERPWRHWGHPEFVRPVYYWDWALVHSVTCTAEDSYGDQYPVTQSTWGGFGLPDMTTVEDDALDRCYEESGGDQSCYLATCSHY*
Ga0075019_108098672	3300006086	Watersheds	LTAFAEGGHEDRRGEERGKERIYEPRPMQPQFKAHPPGVHPHGPMVRPHAVRVVQTRVVPYGGRTWNHWIHPEFARPAYYWEWNSIHQINCVAEDSYGDQYPVTEATFAGFGINNMTAVEDDALDRCYAESGNDTSCFLLTCSHY*
Ga0097621_1010997981	3300006237	Miscanthus Rhizosphere	RPWRHWGHPEFVRPVYYWDWAQVHSVTCIAEDSYGDQYPVTQSTWGGFGLPDMTTVEDDALDRCYAESGGDQSCYLATCSHY*
Ga0105240_100017083	3300009093	Corn Rhizosphere	MVRPHAVRVLKPSVARFGAHPWRHWEHPEFARPAYYWEWSAIRQISCIAEDSYGDQYPVTEDTFAGFGLVDMTAVEDDALDRCYQESGGDPSCYLASCSHF*
Ga0105238_112842862	3300009551	Corn Rhizosphere	MRPSVPRFGTHPWRRWEHSEFARPVYYWDWNAIHSVTCTAEDSYGDQYPVTEETFTGFGLPHMTAVEDDALDRCYQESGGDPSCYLASCSHF*
Ga0105238_122012561	3300009551	Corn Rhizosphere	RPAPPRFQGHPPGAHPHGSPYRPHPVRVLRPTMIHRGAERPWRHWGHPEFVRPVYYWDWAQVHSVTCIAEDSYGDQYPVTQSTWSGFGLSDMTTVEDDALDRCYAESGGDRSCYLATCSHY*
Ga0116120_10358473	3300009641	Peatland	MSPTVVKYGGHQWRHWAHPEFSRPVYYWNWAIVQSVTCIAEDSYGDQYPVTEATFSGFGLVNMTAVEDDALDRCAEESGGDQSCYLATCSHF*
Ga0134125_107355192	3300010371	Terrestrial Soil	MVRQHALRVLRPTVVRRGERPWRHWEHPEFARPIYYWDWNLTHTVTCTAEDSYGDQYPVTEQTFAGFGLANMGYVEDDALDRCYQESGGDQSCYLATCSHY*
Ga0134125_107583512	3300010371	Terrestrial Soil	MVRPHAVRVMRPSVAHYGAHPWRRWEHPQFARPIYYWDWNAIHTVSCTAEDSYGDQYPVTEETFAGFGLAHMTAVEDDALDRCYQESGGDPSCFLATCSHY*
Ga0134125_110230401	3300010371	Terrestrial Soil	HWEHPVFARPAYYWDWYAVRQVTCVAEDSYGDQYPVTEDTWRGFAISNMNDVEDDALDRCYQESGGDPSCFLATCSHN*
Ga0134125_119786062	3300010371	Terrestrial Soil	MVRQHPVRVMRPIIVRRGERPWRRWEHPEFARPVYYWDWNQIHTVTCTAEDSYGDQYPVTETTFAGFGLGNMSYVEDDALDRCYQESGSDPNCFLATCSHY*
Ga0105239_102013121	3300010375	Corn Rhizosphere	PHEEGRPHEERRLHEEARARAPRPLPPKFQAHPPGIHPHGPMVRPHAVRVLRPSVARYGAHPWRHWEHPEFARPAYYWEWSAIHQISCIAEDSYGDQYPVTEETFPGFGLIDMTAIEDDALDRCFQESGGDPSCYLASCSHF*
Ga0105239_119568821	3300010375	Corn Rhizosphere	MVRPHAMRVLKPSVARFGAHPWRHWEHPEFARPAYYWEWSAIHQVSCTAEDSYGDQYPVTEETFAGFGLIDMTAIEDDALDRCYQESGGDPSCYLASCSHF*
Ga0126381_1026189751	3300010376	Tropical Forest Soil	RPEQSARPAPRENPQPYRAHPPGAHPHGPIVRQHAVRVLPPRVVTPGRTDQWQHWRHPEFTRPLYYWNWGVIRTITCTAEDSYGDQYPVTEATGPDFGLGDMTAVEDAALDRCYSESGGDQTCFLAACTHN*
Ga0136449_1034844942	3300010379	Peatlands Soil	MAPRVVVHGGHEWNHWDHPEFYRPVYYWSWTAIRSVSCIAEDSYGDQYPVTEAAVPGFDLNAMTAVEDDAIDRCYWESGQDPSCFLATCSHF*
Ga0134126_113779842	3300010396	Terrestrial Soil	MVRQHPVRVMRPIVVRRGERPWRRWEHPEFARPVYYWDWNQIHTVTCTAEDSYGDQYPVTETTFAGFGIGNMSYVEDDALDRCYQESGGDQNCFLATCSHY*
Ga0150983_139534223	3300011120	Forest Soil	GWTHWEHPEFARPAYYWDWASIHQVSCIAEDSYGDQYPVTEAAVAGFGLDNMTGIEDDALDRCYSESGQDASCYLATCSHF*
Ga0150985_1021136302	3300012212	Avena Fatua Rhizosphere	AVRVLKPSVARFGAHPWRHWEHPEFARPAYYWEWSAIHQISCIAEDSYGDQYPVTEETFAGFGLIDMTAIEDDALDRCFQESGGDPSCYLASCSHF*
Ga0163162_123038792	3300013306	Switchgrass Rhizosphere	WGAHPWKHWEHAEFARPTYYWNWREIHSVSCVAEDSYGDQYPVTQSTFAGFGLANMSAVEDDALDRCYAESGGDQSCYVATCSHF*
Ga0120127_101018341	3300013503	Permafrost	MRYGEHPWRHWGHVEFARPIYYWDWAIIRSVTCVAEDSYGDQYPVTESTFAGFGLQNMTAVEDDALDRCYEESGGDGSCFLTTCSNY*
Ga0181539_12867072	3300014151	Bog	YGGHQWRHWAHPEFSRPVYYWNWAIVRSVTCIAEDSYGDQYPVTEATFSGFGLVNMTAVEDDALDRCAEESGGDQSCYLATCSHF*
Ga0181518_100683523	3300014156	Bog	VVKYGGHQWRHWAHPEFSRPVYYWNWAIVRSVTCIAEDSYGDQYPVTEATFSGFGLVNMTAVEDDALDRCAEESGGDQSCYLATCSHF*
Ga0181523_104707901	3300014165	Bog	HPPGAHPHGPIVRPHPLRVLSPTVVKYGGHQWHHWAHPEFSRPVYYWNWAIIQSVTCIAEDSYGDQYPVTETTFSGFGLVNMTAVEDDALDRCAEESGGDQSCYLATCSHF*
Ga0181535_100307311	3300014199	Bog	WRHWAHPEFARPAYYWNWATIRSVSCIAEDSYGDQYPVSTGTFPGFEMANMTAVEDQALDRCYDESGGDPNCFLLTCSHF*
Ga0181537_101067112	3300014201	Bog	VPYGGHVWNHWAHPEFARPLYYWEWASIHQVTCVAEDSYGDQYPVTEATFPGFALINMSAVEDDALDRCSAESGGDQSCYLATCSHF*
Ga0182011_101569101	3300014496	Fen	HQWRHWAHPEFSRPVYYWNWSIIQSVTCIAEDSYGDQYPVTETTFAGFGLVNMTTVEDDALDRCAEESGGDQSCYLATCSYF*
Ga0182019_101224362	3300014498	Fen	MVRPHSIRVLQPSVVKYGGHQWRHWEHPEFFRPVYYWNWAVIRNVTCIAEDSYGDQYPVTEATFSGFGLDNMTAVEDDALDRCSAESGGDPNCYLATCSHF*
Ga0182021_119356561	3300014502	Fen	MSPQVVKQGEHHWRHWEHAEFSRPAYYWNWAFIRSITCIAEDSYGDQYPVTEDSFAGFGLVNMTAVEDDALDRCYAESGGDQSCYLAT
Ga0182027_103437173	3300014839	Fen	AGVHPKGATVAQHQVRVMAPKVVAYASNQWRHSDRPEFSRPFYYWDWAVIHQVTCVAEDSYGDQYPVTEATPAGFGLHSMSVVEDDALDRCAAESGGDQTCYLATCSHF*
Ga0182027_120169371	3300014839	Fen	IRVMSPRVLKRGEHQWRHWEHAEFSRPVYYWNWAVIRSITCIAEDSYGDQYPVTEDSFSGFGLVNMTAVEDDALDRCYAESGGDQSCYLATCSHF*
Ga0182033_104793731	3300016319	Soil	MRAQEQHLPPRAAPPQWRAHPPGLHPVNNGWHPGYHPHAVRVLRPHDMRYGEHPWRHWGHAEFVRPVYYWDWGVVRSVTCVAEDSYGDQYPVTESTFAGFGLINMTAVEDDALDRCYAESGQDPSCFLTGCSYY
Ga0182038_106315821	3300016445	Soil	TLSPKVVVRGRPTTWPRWSHPEFARPLYYWDWPAVHGVSCVAEDSYGDQYPVSQTTWAGFGLPDMTAVEDDALDHCYAESGQDPSCFLTGCSYY
Ga0181511_15236601	3300016702	Peatland	PNLPPRPAPGRFQAHPPGAHPHGPIVRPHPLRVMSPTVVKYGGHQWRHWAHPEFSRPVYYWNWAIVQSVTCIAEDSYGDQYPVTEATFSGFGLVNMTAVEDDALDRCAEESGGDQSCYLATCSHF
Ga0187786_101720842	3300017944	Tropical Peatland	VRGHHDWRHWEHPEFARRAYYWDWTSISGVTCIAEDSYGDQYPVTEAVGPGFGPADMMFLEDAALDCCYSESGQDPSCYLATCSHY
Ga0187786_105541551	3300017944	Tropical Peatland	QYHPHPVRVLRPTIIRRGAERPWHHWGHAEFVRPVYYWDWGRIHQVTCTAEDSYGDQYPVSVSTWGGFGLPDMTTVEDDALDRCYAESGGDQSCYLATCSHY
Ga0187785_103803101	3300017947	Tropical Peatland	HPPGQHPHGPMVRPHPTRVLAPRVVVRGGERHWRHWEHPEFARPVYYWDWALIHNVTCTAEDSYGDQYPVTEAAGPGLGPVNMTSVEDEALDRCYSESGGDNSCFLLTCAHY
Ga0187889_103405192	3300018023	Peatland	LPPRPAPGRFQAHPPGAHPHGPIVRPHPVRVMSPTVVKYGGHQWRHWAHPEFSRPVYYWNWAIVRSVTCIAEDSYGDQYPVTEATFSGFGLVNMTAVEDDALDRCAEESGGDQSCYLATCSHF
Ga0187869_105239752	3300018030	Peatland	PGRFQAHPPGAHPHGPIVRPHPVRVMSPTVVKYGGHQWRHWAHPEFSRPVYYWNWAIVRSVTCIAEDSYGDQYPVTEATFSGFGLVNMTAVEDDALDRCAEESGGDQSCYLATCSHF
Ga0187890_101916871	3300018044	Peatland	PPGSRDEPTVVKYGGHQWRHWAHPEFSRPVYYWNWAIVQSVTCIAEDSYGDQYPVTEATFSGFGLVNMTAVEDDALDRCAEESGGDQSCYLATCSHF
Ga0187890_107745581	3300018044	Peatland	MVRTHPVRILAPRLLRRDEHPWRHWAHPEFARPAYYWNWATIRSVSCIAEDSYGDQYPVSTGTFPGFEMANMTAVEDQALDRCYDESGGDPNCFLLTCSHF
Ga0187858_109523762	3300018057	Peatland	MSPTVVKYGGHQWRHWAHPEFSRPVYYWNWAIVQSVTCIAEDSYGDQYPVTEATFSGFGLVNMTAVEDDALDRCAEESGGDQSCYLATCSHF
Ga0187765_106295932	3300018060	Tropical Peatland	WGHPEFVRPVYYWDWALVHSVTCTAEDSYGDQYPVTQSTWGGFGLPDMTTVEDDALDRCYAESGGDQSCYLATCSHY
Ga0187765_108650371	3300018060	Tropical Peatland	GAERWPHWEHPEFARPLYYWNWAIIQSVTCTAEDSYGDQYPVTEATGPGFGLMDMTHVEDDTLDRCYAESGQDGTCYLLTCSHY
Ga0181514_14151641	3300019268	Peatland	LGPRSVAYGSHQWRHWDHPEFARPLYYWNWASVHSVTCVAEDSYGDQYPVTESTFAGFGLENMTGVEDDALDRCNAESGGDQSCYLATCSHF
Ga0182028_10441291	3300019788	Fen	PPSGSHPPGAHPHGPIVRPHPVRVMSPTVVKYGGHQWRHWAHPEFSRPVYYWNWAIIQSVTCIAEDSYGDQYPVTETTFAGFGLVNMTTVEDDALDRCAEESGGDLSCYLATCSYF
Ga0210396_115650661	3300021180	Soil	MRYGEHPWRHWGHVEFARPIYYWDWAIIRSVTCVAEDSYGDQYPVTESTFAGFGLQNMTAVEDDALDRCYEESGGDGSCFLTTCS
Ga0210388_113287562	3300021181	Soil	PHFQGHPPGTHPHGAMVRPHPVRVLSPKVVGYGGHDWRHWDHPEFARPAYYWDWNVIHNVTCTAEDSYGDQYPVTEATFRGFGLVNMTAVEDDALDRCNAESGGDQSCYLLTCSHF
Ga0210387_109117552	3300021405	Soil	VHPHGPIVRQHPVRVLAPTAAVHGRTTWAHWEHPEFTRPVYYWNWGAVHNVSCIAEDSYGDQYPVTEAAAPGFGLTNMTDIEDDALDRCYSESGQDNTCYLATCSHI
Ga0210387_114083871	3300021405	Soil	HPPGVHPHGPMVRPHQVRVMRLTVAHYGAHPFRHWEHPEFARPVYYWDWNVIHTVSCTAEDSYGDQYPVTEETFAGFGLAHMTAVEDDALDRCYQESGGDPSCYLATCSHF
Ga0210383_108336181	3300021407	Soil	GRPPVVRQAPPKFVAHPPGAHPRGPTVHSHPVRVLAPRVVVRGGHREWKHWSHPEFVRPAYYWDWASIHNVSCIAEDSYGDQYPVTQATYSGFGNDGMTSVEDDALDRCYSESGGDQSCYLATCSHF
Ga0210390_102996102	3300021474	Soil	PKFQAHPPGVHPHGPMVCPHAVRVMRPTVAHYGAHPFRHWEHPEFARPAYYWDWNLVHSVSCTAEDSYGDQYPVTEETFAGFGLGNMTAVEDDALDRCYQESGGDQSCYLATCSHF
Ga0242669_10386581	3300022528	Soil	HAVRVLQPRNFRYGEHPYRHWGHPEFVRPAYYWDWRLVHSVSCTAEDSYGDQYPVTESTFAGFGLGNMTAVEDDALDRCYDESGGDPSCYLATCSHF
Ga0224516_10183473	3300023232	Soil	RAMSPMVVKYGGHQWRHWAHPEFSRPVYYWNWAIIQSVTCIAEDSYGDQYPVTETTFAGFGLVNMTTVEDDALDRCAEESGGDQSCYLATCSYF
Ga0224523_11005433	3300024238	Soil	PIVRPHPVRVMSPMVVKYGGHQWRHWAHPEFSRPVYYWNWAIIQSVTCIAEDSYGDQYPVTETTFAGFGLVNMTTVEDDALDRCAEESGGDQSCYLATCSYF
Ga0224522_10879261	3300024240	Soil	YGGHQWRHWAHPEFSRPVYYWNWAIIQSVTCIAEDSYGDQYPVTETTFAGFGLVNMTTVEDDALDRCAEESGGDQSCYLATCSYF
Ga0208078_11206732	3300025544	Arctic Peat Soil	GGAPGAHPPGATYHPAYHPHAVRVLRPHTMRYGEHPWRHWGHAEFARPAYYWEWQLIHSVSCTAEDSYGDQYPVTETTFAGFGLNNMTAVEDDALDRCYEESGGDQSCYLATCSHF
Ga0207707_106610552	3300025912	Corn Rhizosphere	MPPKFQAHPPGIHPHGPMVRPHAVRVLKPSVARFGAHPWRHWEHPEFARPAYYWEFSNIHQISCIAEDSYGDQYPVTEDTFAGFGLIDMTSVEDDALDRCYQESGGDPSCYLASCSHF
Ga0207660_106190482	3300025917	Corn Rhizosphere	MVRPHAVRVLKPTVARFGAHPWRHWEHAEFARPAYYWDWAAIRQISCIAEDSYGDQYPVTEETFSGFGLVDMTAVEDDALDRCYQESGGDPSCYLASCSHF
Ga0207700_112627892	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	PHPPGAHPHGPVVRQHPVRVMRPTVVRRGERPWRRWEHPEFARPIYYWDWNQLHTVTCTAEDSYGDQYPVTETTFAGFGLGNMSYVEDDALDRCYQESGGDPNCFLATCSHY
Ga0207661_119097351	3300025944	Corn Rhizosphere	MIHRGAERPWRHWGHPEFVRPVYYWDWAQVHSVTCIAEDSYGDQYPVTQSTWGGFGLPDMTTVEDDALDRCYAESGGDQSCYLATCSHY
Ga0207639_116399011	3300026041	Corn Rhizosphere	MPPKFQAHPPGIHPHGPMVRPHAVRVLKPSVARFGAHPWRHWEHPEFARPAYYWEFSNIHQISCIAEDSYGDQYPVTEDTFAGFGLIDMTSVEDDALDRCYQESGGDPNCFLATCSHY
Ga0207702_104024091	3300026078	Corn Rhizosphere	RPAHVNYGARQWRHWEHPVFARPHYYWEWSDVHQVTCVAEDSYGDQYPVTEDTWRGFGMTNMTDVEDDALDRCYQESGGDPSCYLATCSHY
Ga0247847_10405932	3300026450	Soil	GPIVRPHPVRVMSPMVVKYGGHQWRHWAHPEFSRPVYYWNWAIIQSVTCIAEDSYGDQYPVTETTFAGFGLVNMTTVEDDALDRCAEESGGDQSCYLATCSYF
Ga0247847_10566411	3300026450	Soil	RFQAHPPGAHPHGPIVRPHPVRVMSPMVVKHGGHQWRHWAHPEFSRPVYYWNWAIIQSVTCIAEDSYGDQYPVTETTFAGFGLVNMTTVEDDALDRCAEESGGDLSCYLATCSYF
Ga0247845_10002911	3300026451	Soil	PHPVRVMSPMVVKHGGHQWRHWAHPEFSRPVYYWNWAIIQSVTCIAEDSYGDQYPVTETTFAGFGLVNMTTVEDDALDRCAEESGGDLSCYLATCSYF
Ga0209060_100100436	3300027826	Surface Soil	RVMRPQVIRRGDHPWAHWGHPEFARPVYYWDWGGIRTVTCVAEDSYGDQYPVTQDTFAGFGLVNMTSVEDDALDRCYQESGGDPSCFLATCSHY
Ga0209275_108046091	3300027884	Soil	RPAPPKFQAHPPGVHPHGPMVRPHALRVMRPTVARYGAHPWRHWEHPEFARPVYYWDWSLIHNISCTAEDSYGDQYPVTEEAFSGFGLVNMTAVEDDALDRCYQESGGDPSCYLATCSHF
Ga0209067_106365562	3300027898	Watersheds	LTAFAEGGHEDRRGEERGKERIYEPRPMQPQFKAHPPGVHPHGPMVRPHAVRVVQTRVVPYGGRTWNHWIHPEFARPAYYWEWNSIHQINCVAEDSYGDQYPVTEATFAGFGINNMTAVEDDALDRCYAESGNDTSCFLLTCSHY
Ga0265337_10427571	3300028556	Rhizosphere	MVRPHPIRILSPRMVKHGEHQWHRWEHAEFTRPVYYWNWAAIRSVTCIAEDSYGDQYPVTEETVSGFGLSHMTAVEDDALDRCYAESGGDQSCYLATCSHF
Ga0265319_100033326	3300028563	Rhizosphere	VHSRPVRVLAPKVVDRARHEWTHWEHPQLVRPAYYWDWQHIHSVMCVAEDSYGDQYPVTEAAQPGFGLEEMTQVEDDALDRCFAESGQDPTCVLASCTHI
Ga0265319_12283671	3300028563	Rhizosphere	HPEFARPAYYWDWSLIHQISCIAEDSYGDQYPVTEETFAGFGLVDMTAIEDDTLDRCYQESGGDPSCYLASCSHF
Ga0302208_101384001	3300028774	Fen	KHGGHQWRHWAHPEFSRPVYYWNWAIIQSVTCIAEDSYGDQYPVTETTFAGFGLVNMTTVEDDALDRCAEESGGDLSCYLATCSYF
Ga0302279_101171221	3300028783	Bog	GPTAHAHAIRVLAPSIVVRGHGSWGRWDHPEFARPSYYWAWGSFQNVSCIAEDSYGDQYPVTEAAGPAFVFNDMTAAEDDALDRCYSESGQDPSCYLATCSHF
Ga0265338_100455241	3300028800	Rhizosphere	RFQAHPPGAHPHGPIVRPHPVRVMSPTVVKYGGHQWRHWAHPEFSRPAYYWNWAIIQSVTCIAEDSYGDQYPVTEATFSGFGLVNMTTVEDDALDRCAEESGGDLSCYLATCSYF
Ga0302157_100550581	3300028813	Bog	WAHWNHPEFSRPAYYWDWNKVHNVLCTAEDSYGDQYSVTESTPPGFGLNDMTNVEDDALDRCYSESGQDSTCVLATCTNI
Ga0311363_111354872	3300029922	Fen	PVRVLQPRVIAYGGHDWHHWEHPEFARPTYYWDWSLVHNVSCITEDSYGDQYPVTESTFAGFGLINMTAIEDDALDRCYVESGNDPSCYLVSCSHF
Ga0311371_117203661	3300029951	Palsa	RVIVHGGREWGHWDHPEFARPTYYWDWAAVHNVTCVAEDSYGDQYPVTEAAVPGFALGNMTDVEDDALDRCYSESGQDPSCYLATCSHF
Ga0311331_116604992	3300029954	Bog	WNHPEFARPVYYWDWKRVHTVTCVAEDSYGDQYPISEAAAPGFGLANMTEVEDDALDRCYAESGQDATCVLASCTHI
Ga0311353_117298411	3300030399	Palsa	PHGAMVRPHAVRVLQPRVVTYGVHTWARWPHPEFARPAYYWNWGIVHNVTCITEDSYGDQYPVTESTFAGFGLANMTIVEDDSLDRCYAESGSDPSCFLLTCSHF
Ga0302193_102504972	3300030519	Bog	PNGATVHQHPVRVLAPRVVTHGRTGWAHWNHPEFSRPAYYWDWNKVHNVLCTAEDSYGDQYSVTESTPPGFGLNDMTNVEDDALDRCYSESGQDSTCVLATCTNI
Ga0170834_1092748141	3300031057	Forest Soil	HPFRRWEHPAFARPVYYWDWNVIHTVSCTAEDSYGDQYPVTEETFSGFGLAHMTAVEDDALDRCYQESGGDPSCYLATCSHF
Ga0170822_137070711	3300031122	Forest Soil	YGAHPWHHWEHPVFARPVYYWDWALIHNVSCTAEDSYGDQYPVTEETFSGFGLAHMTAVEDDALDRCYQESGGDPSCYLATCSHF
Ga0265330_101010802	3300031235	Rhizosphere	HPEFSRPVYYWNWAVIRNVTCIAEDSYGDQYPVTEAAFSGFGLDNMTAVEDDALDRCAAESGGDPSCYLATCSHF
Ga0265330_103198861	3300031235	Rhizosphere	RPHATRVVSPRTVPYGSHQWQHWNHPEFSRPAYYWDWSNVHNVSCIAEDSYGDQYPVTETTTPGFGLNNMTQVEDDALDRCASESGGDQTCYLVTCSHF
Ga0265330_104035261	3300031235	Rhizosphere	AHYGAHPFRHWEHPEFARPVYYWDWNAIHTVSCTAEDSYGDQYPVTEETFSGFGLAHMTAIEDDALDRCYQESGGDPSCYLATCSHF
Ga0302324_1014376611	3300031236	Palsa	PTVVVRGGHPTWGHWAHPGFTRPLYYWDWGLVHSVSCVAEDSYGDQYPVTEAAWAGFGLTNMTEVEDNALDRCYWESGQDPSCYLATCSHF
Ga0265332_100131831	3300031238	Rhizosphere	GAVVHSRPVRVLAPKVVDRARHEWTHWEHPQLVRPAYYWDWQHIHSVMCVAEDSYGDQYPVTEAAQPGFGLEEMTQVEDDALDRCFAESGQDPTCVLASCTHI
Ga0265332_100884422	3300031238	Rhizosphere	PHAVRVMRPTVAHYGAHPWRRWEHPKIARPVYYWDWNAIHTVSCTAEDSYGDQYPVTEETFSGFGLAHMTAVEDDALDRCYQESGGDPSCYLATCSHF
Ga0265320_102150861	3300031240	Rhizosphere	LINNTKHIISEHKRRRWEHPEFARPAYYWDWALIHQISCVAEDSYGDQYPVTEETFAGFGLIDMTAIEDDALDRCYQESGGDPSCYLASCSHF
Ga0265316_107044572	3300031344	Rhizosphere	PRASPPKFQAHPPGVHPHGPMVRPHAVRVMRPTVAHYGAHPFRHWEHPEFARPVYYWDWNAIHTVSCTAEDSYGDQYPVTEETFSGFGLAHMTAVEDDALDRCYQESGGDQSCYLATCSH
Ga0170818_1130600191	3300031474	Forest Soil	PAYHPHAVRVLRPHVTRYGEHPWRHWGHVEFARPIYYWDWAIIRSVTCVAEDSYGDQYPVTESTFAGFGLQNMTAVEDDALDRCYEESGSDGSCFLMTCSNY
Ga0265313_102689192	3300031595	Rhizosphere	HFQGHPPGTHPHGAMVRPHPVRVLSPKVVGYGGHDWRHWEHPEFARPAYYWDWNVIHNVTCTAEDSYGDQYPVTEATFRGFGLVNMTAVEDDALDRCNVESGGDQSCYLLTCSHF
Ga0265313_103748181	3300031595	Rhizosphere	PKTVVYGHHQWNHWEHPEFARPVYYWDWAQVHNVTCVAEDSYGDQYPIAEAAVPGFGLTNMTEIEDDALDRCYAESGQDTSCFLATCSHF
Ga0318542_102482751	3300031668	Soil	HGPIVRPHPVRTLSPKVVVRGRPPAWPRWSHPEFARPLYYWDWPAVHGVSCVAEDSYGDQYPVSQTTWAGFGLPDMTAVEDDALDHCYAESGQDPSCFLTGCSYY
Ga0265314_104251393	3300031711	Rhizosphere	RVMSPTVVKYGGHQWRHWAHPEFSRPVYYWNWAIIQNVTCIAEDSYGDQYPVTETTFSGFGLVNMTTVEDDALDRCAEESGGDLSCYLATCSYF
Ga0265342_100017285	3300031712	Rhizosphere	MVVKYGGRQWRHWAHPEFSRPVYYWDWTMVHNVTCIAEDSYGDQYPVTEETFSGFGLVNMTAVEDDALDRCAAESGGDPTCYLATCTNF
Ga0265342_101235563	3300031712	Rhizosphere	AHPHGAIVRPHATRVVSPRTVPYGSHQWQHWNHPEFSRPAYYWDWSNVHNVSCIAEDSYGDQYPVTETTTPGFGLNNMTQVEDDALDRCASESGGDQTCYLVTCSHF
Ga0265342_102438442	3300031712	Rhizosphere	HGEHQWHRWEHAEFTRPVYYWNWAAIRSVTCIAEDSYGDQYPVTEETVSGFGLSHMTAVEDDALDRCYAESGGDQSCYLATCSHF
Ga0265342_103614262	3300031712	Rhizosphere	VAQYGGHQWRHWEHPEFSRPVYYWNWAVIRNVTCIAEDSYGDQYPVTEAAFSGFGLDNMTAVEDDALDRCAAESGGDPSCYLATCSHF
Ga0318493_102729512	3300031723	Soil	PTTWPRWSHPEFARPLYYWDWPAVHGVSCVAEDSYGDQYPVSQTTWAGFGLPDMTAAEDDALDRCYAESGQDPSCFLTGCSYY
Ga0318502_101193214	3300031747	Soil	LSPKVVVRGRPTTWPRWSHPEFARPLYYWDWPAVHGVSCVAEDSYGDQYPVSQTTWAGFGLPDMTAVEDDALDRCYAESGQDPSCFLTGCSYY
Ga0318526_104613742	3300031769	Soil	TLSPKVVVRGRPTTWPRWSHPEFARPLYYWDWPAVHGVSCVAEDSYGDQYPVSQTTWAGFGLPDMTAAEDDALDRCYAESGQDPSCFLTGCSYY
Ga0318508_12554871	3300031780	Soil	RVVNSGQRPWRHWGHPEFVRPAYYWDWGIIRSVTCIAEDSYGDQYPVSQTTWAGFGLPDMTAAEDDALDRCYAESGQDPSCFLTGCSYY
Ga0318529_102553732	3300031792	Soil	RTLSPKVVVRGRPTTWPRWSHPEFARPLYYWDWPAVHGVSCVAEDSYGDQYPVSQTTWAGFGLPDMTAAEDDALDRCYAESGQDPSCFLTGCSYY
Ga0302322_1035958592	3300031902	Fen	MVRQHPIRSLAPRFVARGHHEWNHWEHPEFTRPHYDWAWGTFQNVTCVAEDSYGDQYPVTQLAGPGFGLGEMTNAEDDAIDRCYAESGQDASCYLASCSNY
Ga0310909_114451082	3300031947	Soil	PIVRPHPVRTLSPKVVVRGRPTTWPRWSHPEFARPLYYWDWPAVHGVSCVAEDSYGDQYPVSQTTWAGFGLPDMTAAEDDALDRCYAESGQDPSCFLTGCSYY
Ga0307479_108221992	3300031962	Hardwood Forest Soil	HVVRVLRPRATRYGEHPWRHWGHVEFARPIYYWDWEIIRSVTCVAEDSYGDQYPVTESTFAGFGLQNMTAVEDDALDRCYEESGGDGSCFLTTCSNY
Ga0318505_102486622	3300032060	Soil	VVRGRPTTWPRWSHPEFARPLYYWDWPAVHGVSCVAEDSYGDQYPVSQTTWAGFGLPDMTAVEDDALDRCYAESGQDPSCFLTGCSYY
Ga0311301_123733521	3300032160	Peatlands Soil	APPQFQAHPPGQHPHGPVVRQHPVRVMAPRVVVHGGHEWNHWDHPEFYRPVYYWSWTAIRSVSCIAEDSYGDQYPVTEAAVPGFDLNAMTAVEDDAIDRCYWESGQDPSCFLATCSHF
Ga0315268_107219451	3300032173	Sediment	IHSGREWSHWDHEEFSRPVYFWDWSSIHSVSCIAEDTYGDQYPVTQTVRGWGLANMTMLEDDALDRCYAESGHDSSCYLATCSHF
Ga0335082_110722432	3300032782	Soil	HWAHPVFRRPIYYWNWAVVRTVTCVAEDSYGDQYPVTESITPGFQLQDMTGVEDDALDRCYAESGQDPSCMLVGCSHG
Ga0335080_102159722	3300032828	Soil	MVRQHPTRVLAPRAVVRGERGRPWSHWEHPAFARPVYYWDWSTIHNVTCTAEDSYGDQYPVTQAAGPGFGLTDMSALEDEALDRCYGESGQDSSCFLAACSHY
Ga0335080_123231941	3300032828	Soil	PIVRQHAVRVLRPRVVERGREVWRHWEHPEFARPTYYWDWNILRSVTCVAEDSYGDQYPVTEGTWSGFAFNDMTGIEDQALDRCYNESGGDQSCFLATCTHG
Ga0335081_105404631	3300032892	Soil	MVRQHPTRVLAPRAVVRGERGRPWSHWEHPAFARPVYYWDWSTIHNVTCTAEDSYGDQYPVSQAAGPGFGLTDMSALEDEALDRCYGESGQDSSCFLAACSHY
Ga0335069_110023861	3300032893	Soil	VYVHGARDGWRHWEHPEFLRPHYYWNWAVIHQVSCTAEDSYGDQYPVTEATGPGFALESMTAIEDDALDRCYAESGSDDTCYLVGCSHF
Ga0335069_121340121	3300032893	Soil	PHGPIVRQHPVRVVAPRTVVYGHHEWTHWEHPEFARPVYYWDWAVVHSVTCVAEDSYGDQYPVTEAAVPGFGLAHMTQVEDDALDRCFVESGQDSSCFLATCSHF
Ga0335083_102822401	3300032954	Soil	AHPAGAHPHGPMVRPHNVRVLKPSVVRYGAHPFRRWDHPAFARPAYYWDWPMVRQVSCVAEDSYGDQYPVTEDTWRGFGLTNMSDVEDDALDRCYQESGGDPSCFLATCSHF
Ga0334844_002642_1_243	3300033743	Soil	WRHWAHPEFSRPVYYWNWAIIQNVTCIAEDSYGDQYPVTETTFAGFGLVNMTTVEDDALDRCAEESGGDQSCYLATCSYF
Ga0334821_011505_1536_1808	3300033798	Soil	PRVVKHGEHQWRHWEHAEFSRPVYYWNWAVIRSITCIAEDSYGDQYPVTEDSFGGFGLVNMTAVEDDALDRCYAESGGDQSCYLATCSHF
Ga0334810_049988_757_1023	3300033890	Soil	VVKYGGHQWRHWAHPEFSRPAYYWNWAIIQSVTCIAEDSYGDQYPVTETTFAGFGLVNMTTVEDDALDRCAEESGGDLSCYLATCSYF
Ga0370483_0203812_332_595	3300034124	Untreated Peat Soil	VVHGRNTWAHWDHPEFARPAYYWDWNAIHSVMCVAEDSYGDQYPVTESAPPGFGLADMTNVEDDALDRCYSESGQDATCVLATCTHI

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056689

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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