Metagenome / Metatranscriptome Family F056709

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056709
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	60 residues
Representative Sequence	MTSLQRHGIREAHKQLHLRMQRSGLSSIKVHVTRRAGKMKFHFTGSEEEVKKAEKILADW
Number of Associated Samples	116
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	20.44 %
% of genes near scaffold ends (potentially truncated)	29.93 %
% of genes from short scaffolds (< 2000 bps)	81.75 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.131 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (9.489 % of family members)
Environment Ontology (ENVO)	Unclassified (32.117 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (32.847 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 37.50% β-sheet: 15.91% Coil/Unstructured: 46.59%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00076	RRM_1	10.95
PF02599	CsrA	2.92
PF06782	UPF0236	2.19
PF02566	OsmC	2.19
PF00487	FA_desaturase	2.19
PF01841	Transglut_core	2.19
PF00072	Response_reg	2.19
PF01636	APH	2.19
PF03486	HI0933_like	1.46
PF01176	eIF-1a	1.46
PF02518	HATPase_c	1.46
PF01797	Y1_Tnp	1.46
PF08238	Sel1	0.73
PF00472	RF-1	0.73
PF05635	23S_rRNA_IVP	0.73
PF13847	Methyltransf_31	0.73
PF00581	Rhodanese	0.73
PF02837	Glyco_hydro_2_N	0.73
PF00107	ADH_zinc_N	0.73
PF00440	TetR_N	0.73
PF13472	Lipase_GDSL_2	0.73
PF01339	CheB_methylest	0.73
PF00270	DEAD	0.73
PF13090	PP_kinase_C	0.73
PF00707	IF3_C	0.73
PF02586	SRAP	0.73
PF13360	PQQ_2	0.73
PF02634	FdhD-NarQ	0.73
PF13517	FG-GAP_3	0.73
PF01427	Peptidase_M15	0.73
PF13414	TPR_11	0.73
PF00570	HRDC	0.73
PF16491	Peptidase_M48_N	0.73
PF02517	Rce1-like	0.73
PF05198	IF3_N	0.73
PF00069	Pkinase	0.73
PF06739	SBBP	0.73
PF07883	Cupin_2	0.73
PF03880	DbpA	0.73
PF02769	AIRS_C	0.73
PF03466	LysR_substrate	0.73
PF06439	3keto-disac_hyd	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0493	NADPH-dependent glutamate synthase beta chain or related oxidoreductase	Amino acid transport and metabolism [E]	2.92
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.92
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	2.92
COG1551	sRNA-binding carbon storage regulator CsrA	Signal transduction mechanisms [T]	2.92
COG0513	Superfamily II DNA and RNA helicase	Replication, recombination and repair [L]	2.19
COG1398	Fatty-acid desaturase	Lipid transport and metabolism [I]	2.19
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	2.19
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	2.19
COG3239	Fatty acid desaturase	Lipid transport and metabolism [I]	2.19
COG0290	Translation initiation factor IF-3	Translation, ribosomal structure and biogenesis [J]	1.46
COG0361	Translation initiation factor IF-1	Translation, ribosomal structure and biogenesis [J]	1.46
COG0446	NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase, or a related oxidoreductase	Lipid transport and metabolism [I]	1.46
COG0492	Thioredoxin reductase	Posttranslational modification, protein turnover, chaperones [O]	1.46
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	1.46
COG1053	Succinate dehydrogenase/fumarate reductase, flavoprotein subunit	Energy production and conversion [C]	1.46
COG1249	Dihydrolipoamide dehydrogenase (E3) component of pyruvate/2-oxoglutarate dehydrogenase complex or glutathione oxidoreductase	Energy production and conversion [C]	1.46
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	1.46
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	1.46
COG2081	Predicted flavoprotein YhiN	General function prediction only [R]	1.46
COG2201	Chemotaxis response regulator CheB, contains REC and protein-glutamate methylesterase domains	Signal transduction mechanisms [T]	1.46
COG2509	FAD-dependent dehydrogenase	General function prediction only [R]	1.46
COG3634	Alkyl hydroperoxide reductase subunit AhpF	Defense mechanisms [V]	1.46
COG0029	Aspartate oxidase	Coenzyme transport and metabolism [H]	1.46
COG1186	Protein chain release factor PrfB	Translation, ribosomal structure and biogenesis [J]	0.73
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.73
COG1526	Formate dehydrogenase assembly factor FdhD, a sulfurtransferase	Energy production and conversion [C]	0.73
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	0.73
COG2173	D-alanyl-D-alanine dipeptidase	Cell wall/membrane/envelope biogenesis [M]	0.73
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	0.73
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.73
COG0216	Protein chain release factor RF1	Translation, ribosomal structure and biogenesis [J]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.13 %
Unclassified	root	N/A	13.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.13 %
Unclassified	root	N/A	13.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.13 %
Unclassified	root	N/A	13.87 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	60.58 %
Unclassified	root	N/A	13.87 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.92 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	58.39 %
Unclassified	root	N/A	13.87 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.46 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.73 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	42.34 %
Unclassified	root	N/A	13.87 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	3.65 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.46 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.73 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	0.73 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	42.34 %
Unclassified	root	N/A	13.87 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	3.65 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.46 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.73 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	0.73 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	42.34 %
Unclassified	root	N/A	13.87 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.46 %
Anaerolineaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae	0.73 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.73 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.73 %
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	0.73 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	42.34 %
Unclassified	root	N/A	13.87 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.46 %
unclassified Anaerolineaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae	0.73 %
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	0.73 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.73 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.73 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	42.34 %
Unclassified	root	N/A	13.87 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.46 %
Anaerolineaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	0.73 %
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	0.73 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.73 %
Verrucomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090014\|GPIPI_16948742	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
2228664022\|INPgaii200_c0505741	Not Available	600	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100784029	All Organisms → cellular organisms → Bacteria	7106	Open in IMG/M
3300000567\|JGI12270J11330_10053412	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2142	Open in IMG/M
3300001213\|JGIcombinedJ13530_105841318	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3302	Open in IMG/M
3300001686\|C688J18823_10945089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	547	Open in IMG/M
3300003990\|Ga0055455_10164005	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300004114\|Ga0062593_101082543	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300004156\|Ga0062589_102119246	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300004282\|Ga0066599_100230435	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1035	Open in IMG/M
3300004631\|Ga0058899_11382743	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	550	Open in IMG/M
3300004774\|Ga0007794_10132271	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300004775\|Ga0007798_10024219	Not Available	1356	Open in IMG/M
3300005176\|Ga0066679_10780201	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	612	Open in IMG/M
3300005341\|Ga0070691_10367733	Not Available	803	Open in IMG/M
3300005343\|Ga0070687_100371431	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	929	Open in IMG/M
3300005436\|Ga0070713_101240616	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300005436\|Ga0070713_101864569	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300005467\|Ga0070706_101084674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	737	Open in IMG/M
3300005529\|Ga0070741_10006138	All Organisms → cellular organisms → Bacteria	26056	Open in IMG/M
3300005537\|Ga0070730_10134915	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1685	Open in IMG/M
3300005537\|Ga0070730_10606360	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	698	Open in IMG/M
3300005555\|Ga0066692_10226587	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1176	Open in IMG/M
3300005614\|Ga0068856_101570686	Not Available	671	Open in IMG/M
3300005841\|Ga0068863_101040051	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	822	Open in IMG/M
3300005842\|Ga0068858_101641680	All Organisms → cellular organisms → Bacteria	634	Open in IMG/M
3300006224\|Ga0079037_100811813	All Organisms → cellular organisms → Bacteria	919	Open in IMG/M
3300006755\|Ga0079222_11220502	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	676	Open in IMG/M
3300006755\|Ga0079222_12103684	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300006854\|Ga0075425_100709373	All Organisms → cellular organisms → Bacteria	1155	Open in IMG/M
3300006903\|Ga0075426_10157867	All Organisms → cellular organisms → Bacteria	1637	Open in IMG/M
3300009053\|Ga0105095_10511843	Not Available	666	Open in IMG/M
3300009090\|Ga0099827_11695403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	551	Open in IMG/M
3300009137\|Ga0066709_101054634	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300009137\|Ga0066709_104578903	All Organisms → cellular organisms → Bacteria	505	Open in IMG/M
3300009175\|Ga0073936_10307613	All Organisms → cellular organisms → Bacteria → PVC group	1025	Open in IMG/M
3300009524\|Ga0116225_1479030	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	553	Open in IMG/M
3300010398\|Ga0126383_11705023	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	719	Open in IMG/M
3300010403\|Ga0134123_10740018	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	967	Open in IMG/M
3300011120\|Ga0150983_12749027	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300011120\|Ga0150983_16095747	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	839	Open in IMG/M
3300012203\|Ga0137399_10857634	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300012203\|Ga0137399_11660444	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300012207\|Ga0137381_10430535	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1152	Open in IMG/M
3300012212\|Ga0150985_109346465	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1159	Open in IMG/M
3300012469\|Ga0150984_107571651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	815	Open in IMG/M
3300012469\|Ga0150984_110412617	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	739	Open in IMG/M
3300012683\|Ga0137398_11168618	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300012685\|Ga0137397_11279988	Not Available	523	Open in IMG/M
3300012922\|Ga0137394_10322752	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1319	Open in IMG/M
3300012923\|Ga0137359_10341606	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1331	Open in IMG/M
3300012925\|Ga0137419_10467808	Not Available	996	Open in IMG/M
3300012925\|Ga0137419_10577791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	900	Open in IMG/M
3300013296\|Ga0157374_11111913	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	811	Open in IMG/M
3300013297\|Ga0157378_12696660	Not Available	549	Open in IMG/M
3300013306\|Ga0163162_13376959	Not Available	510	Open in IMG/M
3300014159\|Ga0181530_10080631	Not Available	1998	Open in IMG/M
3300014160\|Ga0181517_10000071	All Organisms → cellular organisms → Bacteria	129060	Open in IMG/M
3300014839\|Ga0182027_10181709	Not Available	2454	Open in IMG/M
3300014969\|Ga0157376_10262179	All Organisms → cellular organisms → Bacteria	1620	Open in IMG/M
3300015241\|Ga0137418_10764852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	730	Open in IMG/M
3300015264\|Ga0137403_10416057	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1223	Open in IMG/M
3300016319\|Ga0182033_11826193	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300016387\|Ga0182040_11128862	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	657	Open in IMG/M
3300016422\|Ga0182039_10934769	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	775	Open in IMG/M
3300016728\|Ga0181500_1442518	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	794	Open in IMG/M
3300017966\|Ga0187776_11530348	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	513	Open in IMG/M
3300017988\|Ga0181520_10007744	All Organisms → cellular organisms → Bacteria	15638	Open in IMG/M
3300018016\|Ga0187880_1310857	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	677	Open in IMG/M
3300018018\|Ga0187886_1037079	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2388	Open in IMG/M
3300018023\|Ga0187889_10207061	All Organisms → cellular organisms → Bacteria → PVC group	899	Open in IMG/M
3300018040\|Ga0187862_10631335	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	632	Open in IMG/M
3300018083\|Ga0184628_10065410	All Organisms → cellular organisms → Bacteria	1844	Open in IMG/M
3300018088\|Ga0187771_10231108	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1539	Open in IMG/M
3300019887\|Ga0193729_1002331	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	9519	Open in IMG/M
3300020063\|Ga0180118_1321776	Not Available	534	Open in IMG/M
3300020156\|Ga0196970_1009691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2869	Open in IMG/M
3300020163\|Ga0194039_1059725	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300020814\|Ga0214088_1312360	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2684	Open in IMG/M
3300021170\|Ga0210400_10332302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1250	Open in IMG/M
3300021170\|Ga0210400_11220131	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300021420\|Ga0210394_10048328	All Organisms → cellular organisms → Bacteria	3726	Open in IMG/M
3300021559\|Ga0210409_10010066	All Organisms → cellular organisms → Bacteria	9538	Open in IMG/M
3300022185\|Ga0079039_1291525	Not Available	726	Open in IMG/M
3300025447\|Ga0208102_1013860	Not Available	1440	Open in IMG/M
3300025708\|Ga0209201_1026610	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2818	Open in IMG/M
3300025913\|Ga0207695_10067821	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	3658	Open in IMG/M
3300026088\|Ga0207641_11783182	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	617	Open in IMG/M
3300026121\|Ga0207683_10950525	Not Available	798	Open in IMG/M
3300026849\|Ga0207804_126302	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	504	Open in IMG/M
3300026981\|Ga0207822_1028787	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300026997\|Ga0207784_1026325	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	599	Open in IMG/M
3300027330\|Ga0207777_1066335	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	632	Open in IMG/M
3300027516\|Ga0207761_1009284	All Organisms → cellular organisms → Bacteria	2221	Open in IMG/M
3300027516\|Ga0207761_1038932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	932	Open in IMG/M
3300027854\|Ga0209517_10010969	All Organisms → cellular organisms → Bacteria	9956	Open in IMG/M
3300027854\|Ga0209517_10152018	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1480	Open in IMG/M
3300027857\|Ga0209166_10164351	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1206	Open in IMG/M
3300027857\|Ga0209166_10478310	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	641	Open in IMG/M
3300027877\|Ga0209293_10473778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → Anaerolineaceae → unclassified Anaerolineaceae → Anaerolineaceae bacterium	655	Open in IMG/M
3300027899\|Ga0209668_10354801	Not Available	952	Open in IMG/M
3300027902\|Ga0209048_11028452	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	525	Open in IMG/M
3300027903\|Ga0209488_10222474	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1420	Open in IMG/M
3300027915\|Ga0209069_11034785	Not Available	506	Open in IMG/M
3300028800\|Ga0265338_10038262	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	4549	Open in IMG/M
3300029799\|Ga0311022_10518733	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	2670	Open in IMG/M
3300029911\|Ga0311361_11200519	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	607	Open in IMG/M
3300031231\|Ga0170824_103242052	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300031231\|Ga0170824_109757366	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1100	Open in IMG/M
3300031344\|Ga0265316_11145872	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	539	Open in IMG/M
3300031474\|Ga0170818_100268449	Not Available	732	Open in IMG/M
3300031716\|Ga0310813_10065786	All Organisms → cellular organisms → Bacteria	2722	Open in IMG/M
3300031942\|Ga0310916_10347415	All Organisms → cellular organisms → Bacteria	1260	Open in IMG/M
3300031954\|Ga0306926_10011400	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	9868	Open in IMG/M
3300031962\|Ga0307479_11353207	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	672	Open in IMG/M
3300032256\|Ga0315271_10036408	All Organisms → cellular organisms → Bacteria	3488	Open in IMG/M
3300032256\|Ga0315271_10608402	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300032261\|Ga0306920_102994987	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	638	Open in IMG/M
3300032805\|Ga0335078_11156233	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae	899	Open in IMG/M
3300032829\|Ga0335070_10428434	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300032829\|Ga0335070_11094948	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	733	Open in IMG/M
3300032829\|Ga0335070_12021556	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300032893\|Ga0335069_11185163	All Organisms → cellular organisms → Bacteria → PVC group	837	Open in IMG/M
3300032893\|Ga0335069_12215153	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	575	Open in IMG/M
3300032897\|Ga0335071_10254656	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1709	Open in IMG/M
3300033289\|Ga0310914_10556746	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1036	Open in IMG/M
3300033402\|Ga0326728_10123803	All Organisms → cellular organisms → Bacteria	2956	Open in IMG/M
3300033402\|Ga0326728_10351287	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1299	Open in IMG/M
3300033405\|Ga0326727_10958040	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	631	Open in IMG/M
3300033412\|Ga0310810_10000939	All Organisms → cellular organisms → Bacteria	29396	Open in IMG/M
3300033412\|Ga0310810_10239435	All Organisms → cellular organisms → Bacteria	2008	Open in IMG/M
3300033482\|Ga0316627_100806415	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	888	Open in IMG/M
3300033513\|Ga0316628_100619518	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1412	Open in IMG/M
3300033513\|Ga0316628_102259877	Not Available	720	Open in IMG/M
3300033521\|Ga0316616_104044807	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	552	Open in IMG/M
3300033521\|Ga0316616_104234438	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300033977\|Ga0314861_0064522	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1971	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.40%
Host-Associated	Host-Associated	12.41%
Engineered	Engineered	2.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.69%
Aquatic	Environmental → Aquatic	19.71%
Plants	Host-Associated → Plants	12.41%
Bioreactor	Engineered → Bioreactor	1.46%
Wastewater	Engineered → Wastewater	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.77%
Freshwater	Environmental → Aquatic → Freshwater	16.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.30%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.11%
Peat	Environmental → Terrestrial → Peat	2.92%
Marine	Environmental → Aquatic → Marine	1.46%
Sediment	Environmental → Aquatic → Sediment	1.46%
Anaerobic	Engineered → Bioreactor → Anaerobic	1.46%
Anaerobic Digestor	Engineered → Wastewater → Anaerobic Digestor	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.42%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.68%
Loam	Environmental → Terrestrial → Soil → Loam	10.95%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	7.30%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.38%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.65%
Lake	Environmental → Aquatic → Freshwater → Lake	2.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.19%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.46%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified	1.46%
Pond	Environmental → Aquatic → Freshwater → Pond	0.73%
Sand	Environmental → Terrestrial → Soil → Sand	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.73%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.73%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.44%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.95%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	10.95%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	6.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.38%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.92%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.19%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	2.19%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	1.46%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.46%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.46%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.46%
Unclassified	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified	1.46%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.73%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.73%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.73%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.73%
Unclassified	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.49%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.76%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.38%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.65%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.92%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.92%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.92%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.19%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.19%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.19%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.19%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	1.46%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.46%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.46%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.46%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.46%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.46%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.46%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.46%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.73%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.73%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.73%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.73%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.73%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.73%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.73%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.73%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.73%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.73%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.73%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.73%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.73%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.73%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.73%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.73%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.73%
Anaerobic Digestor Sludge	Engineered → Wastewater → Anaerobic Digestor → Unclassified → Unclassified → Anaerobic Digestor Sludge	0.73%
Anaerobic Digester Digestate	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Anaerobic Digester Digestate	0.73%
Granular Sludge	Engineered → Bioreactor → Anaerobic → Unclassified → Unclassified → Granular Sludge	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
2228664022	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300003990	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300004631	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004774	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA5M	Environmental	Open in IMG/M
3300004775	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA17M	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016728	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018023	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_100	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020156	Soil microbial communities from Anza Borrego desert, Southern California, United States - S1+v_5-13C	Environmental	Open in IMG/M
3300020163	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-8m	Environmental	Open in IMG/M
3300020814	Granular sludge microbial community from anaerobic digester, University of Toronto, Ontario, Canada - UASBVu03_granules megahit	Engineered	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022185	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025447	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - MA17M (SPAdes)	Environmental	Open in IMG/M
3300025708	Active sludge microbial communities of municipal wastewater-treating anaerobic digesters from USA - AD_UKC055_MetaG (SPAdes)	Engineered	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026849	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 46 (SPAdes)	Environmental	Open in IMG/M
3300026981	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 67 (SPAdes)	Environmental	Open in IMG/M
3300026997	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 66 (SPAdes)	Environmental	Open in IMG/M
3300027330	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 35 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027877	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029799	Metagenomes from anaerobic digester of solid waste, Toronto, Canda. Combined Assembly of Gp0238878, Gp0238879, Gp0242100, Gp0242119	Engineered	Open in IMG/M
3300029911	III_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPIPI_03640110	2088090014	Soil	MNSLQHHGPREAQKQLHLRMQRSGLSSVTVHVIRRGKLRFHFTGLEEEVKRAEKILADWS
INPgaii200_05057411	2228664022	Soil	MNSLQRHGPHEAHKQLHLRMQRSGLSSVKVLVTRRAGKIKINFTGPDEDVKKAEQILADW
INPhiseqgaiiFebDRAFT_1007840295	3300000364	Soil	MTSLQHHGIKEAHKQLHLRMKRTGLTTIKVEVTRRAGKLRFSFTGSDTEVKQAEQILADWA*
JGI12270J11330_100534121	3300000567	Peatlands Soil	MISLQHHGLHEAHKQLRLRMQRSGLSSIKVEVTRRAGKLQFHFSGSEEEVKKAEKILADWN*
JGIcombinedJ13530_1058413183	3300001213	Wetland	MTSLQRVGAKEAHKQLHLRMRRSGLASIKVLVTRRAGKLQFGFAGTEEEVKKAEAILADWA*
C688J18823_109450891	3300001686	Soil	MISLQQHGPHEARKQLQLRMKRSGLSSISVQVTRRAGKLKFHFEGSAEEVKKADKILADWY*
Ga0055455_101640051	3300003990	Natural And Restored Wetlands	HGPHEAQKQLRLRMQRSGLSSVKVHVIRRGKLRFHFSGLEEEVKMAEKILADWN*
Ga0062593_1010825431	3300004114	Soil	MNSSLQKHGIKEAYKQLQVRMKRDGLTSIKVDVTRRAGKLKFAFTGSAGEVKKAEKILAEWN*
Ga0062589_1021192461	3300004156	Soil	MNSLQRHGPHEAHKQLHLRMQRSGLSSVKVLVTRRAGKIKINFTGPDEDVKKAEQILADWN*
Ga0066599_1002304353	3300004282	Freshwater	MKSLERHGPEEAYKQLHLRMKRSGLTSVRVQVSRRAGRMKFHFTGSDEEVKKAEKILADWN*
Ga0058899_113827432	3300004631	Forest Soil	MTSLQHHGIHEAHKQLHLRMQRNGLSSIKVHVTRRAGKLQFHFTGSEEEVKKAETILAAWN*
Ga0007794_101322711	3300004774	Freshwater	MNSLQHHGIEEVHKQLHTRMQRNGLLSIKVLVTRRAGKMKFNFTGLDEEVKKAEKILADWN*
Ga0007798_100242192	3300004775	Freshwater	MNSLQHHGIEEVHKQLHTRMQRSGLSSIKVLVTRRAGKMKFNFTGLDEEVKKAEKILADWN*
Ga0066679_107802011	3300005176	Soil	MNSLQHHGIKEAHKQLHLRMKRSGLGTIKVLVTRRAGKLQFGFTGSAGEVKRAEEILADWN*
Ga0070691_103677332	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MSNSLQRHGLHEAHKQLRLRMKNSGLDTIEVQVIRRAGKLKFNFTGSTDQVAKAEKILADWN*
Ga0070687_1003714312	3300005343	Switchgrass Rhizosphere	MSNSLQKHSPHEAHKQLRLKMKNSGLASIEVQVTRRAGKMKFHFIGAPEEVTKAEAILAAWG*
Ga0070713_1012406162	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNSLQRHGLHEAHKQLHLRMRRNGLASIVVHVTRRAGKLQFNFTGSAEEVKKAEAILAEWN*
Ga0070713_1018645691	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MNSLQRHGPRETHKQLHLRMQRSGLSSIKVHVTRRAGKLKFHFTGSDGEVKKAEQILADWN*
Ga0070706_1010846741	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTSLQHHGIKEAHKQLHCRMKRDGLTSIKVEVTRRAGKLRFNFTGSDEEVKQAEKILAGWS*
Ga0070741_1000613811	3300005529	Surface Soil	MHSLQRHGPKEAYRQLHLRMQRSGLSSVRVLVTRRAGKMKFNFTGSEEEVQKAEKILADWN*
Ga0070730_101349154	3300005537	Surface Soil	MNSLQRHGIHEAHKQLHLRMQRSGLSTIKVIITRRAGKMKFSFTGSEEEVKKAERILAEWS*
Ga0070730_106063602	3300005537	Surface Soil	MNSLQRHGIHEAHKQLHLRMQRSGLSTIKVVVSRRAGKLQFSFAGSQEEVKKAERILADWN*
Ga0066692_102265874	3300005555	Soil	MNSLQRHGIHEAHKQLHLRMQRSGLSTIKVVVTRRAGKMKFSFTGSEGEVKRAEQILAEWS*
Ga0068856_1015706862	3300005614	Corn Rhizosphere	MNSLQRHGPHEAHKQLHLRMQRSGLSSVKVLVTRRAGKIKINFTGPDEEV
Ga0068863_1010400512	3300005841	Switchgrass Rhizosphere	MKSLQRHGLKEAHKQLRFRMQKSGLSSVKVQVTRRAGKLKFNFTGSDDEVKKAEKILADWN*
Ga0068858_1016416801	3300005842	Switchgrass Rhizosphere	MNSSLQKHGIKEAYKQLQVRMKRDGLTSIKVDVTRRAGKLKFAFTGSAGEVKKAEKIL
Ga0079037_1008118133	3300006224	Freshwater Wetlands	MKSLERHGPEEAYKQLHLRMKRSGLTSIKVQVSRRAGRMKVHFTGSDEEVKKAEKILADWN*
Ga0079222_112205023	3300006755	Agricultural Soil	MTSLQRHGPHEAHKQLHLRMQRSGLSSIKVIVTRRAGKLRFNFTGSEDEVKKAEKILADWT*
Ga0079222_121036842	3300006755	Agricultural Soil	MNSLQRHGLHEAHKQLHLRMQRSGLSSIKVQVTRRAGKMKFHFTGLDEEVKKAEQILADWN*
Ga0075425_1007093732	3300006854	Populus Rhizosphere	MNSLQRHGIHEAHKQLHLRMQRSGLSTIKVVVTRRAGKMKFSFTGSEEEVKKAEQILAEWS*
Ga0075426_101578672	3300006903	Populus Rhizosphere	MNSLQRHGIHEAHKQLHLRMQRGGLSTIKVIVTRRAGKMQFSFTGSQEEVKKAERILADWN*
Ga0105095_105118432	3300009053	Freshwater Sediment	MKSLERHGPEEAYKQLHLRMKRSGLTSIKVQGSRRAGRMKVHFTGSDEEVKKAEKILADWN*
Ga0099827_116954031	3300009090	Vadose Zone Soil	MTSLQHHGIKEAHKQLHFRMKRDGLTSIKVEVTRRAGKLRFNFTGSDEEVKQAEKILAGWS*
Ga0066709_1010546341	3300009137	Grasslands Soil	QHGIKEAHKQLHLRMKRSGLATIKVLVTRRAGKLQFNFTGSAGEVKKAEQILADWN*
Ga0066709_1045789031	3300009137	Grasslands Soil	IKEAHKQLHLRMKRSGLTSIKVEVTRRAGKLKFNFTGSDAEVKQAEQILADWN*
Ga0073936_103076132	3300009175	Freshwater Lake Hypolimnion	MNSLQHHGIEEVHKQLHTRMQRSGLSSIKVVVTRRAGKMKFNFTGLDEEVKKAEKILADWN*
Ga0116225_14790301	3300009524	Peatlands Soil	HEAHKQLRLRMQRSGLSSIKVEVTRRAGKLQFHFSGSEEEVKKAEKILADWN*
Ga0126383_117050232	3300010398	Tropical Forest Soil	LAITRLPAHGIREAHKQLYLRMQRNGLSSIKVHVTRRAGKLKFHFTGSEEEVKKAEKILADWN*
Ga0134123_107400182	3300010403	Terrestrial Soil	MNSLQHHGIKEAHKQLQLRMKRSGLTSIKVDVIRRAGKLRFNFTGSDEEVKKAEKILADWS*
Ga0150983_127490272	3300011120	Forest Soil	GIHEAYKQLHLRMQRNGLTSIKVLVTRRAGKIRFNFEGLEEEVKKAEKILADWN*
Ga0150983_160957471	3300011120	Forest Soil	QHHGIHEAHKQLHLRMKRSGLSSIKVLVTRRAGKIQFHFTGLDEEVRKAEKILADWN*
Ga0137399_108576342	3300012203	Vadose Zone Soil	MNSLQHHGIKEAHKQLHFRMKRDGLASIKVEVSRRAGKLKFNFTGSAVEVKQAEKILADWN*
Ga0137399_116604441	3300012203	Vadose Zone Soil	IKEAHKQLHFRMKRNGLASIKVEVTRRAGKLRFNFTGSDEEVKQAEKILAGWT*
Ga0137381_104305352	3300012207	Vadose Zone Soil	MNSLQHHGIKEAHKQLHFRMKKSGLASIKVEVTRRAGKLRFNFTGSDEEVKQAEKILADWS*
Ga0150985_1093464651	3300012212	Avena Fatua Rhizosphere	QHGPHEARKQLQLRMKRSGLSSISVQVTRRAGKLKFHFEGSAEEVKKADKILADWY*
Ga0150984_1075716511	3300012469	Avena Fatua Rhizosphere	HGPQEAHKQLHLRMQRRGLSSIKVEVTRRAGKLKFNFTGSASDVKEAEKILADWN*
Ga0150984_1104126172	3300012469	Avena Fatua Rhizosphere	SHEAHKQLQLRMQRDGLSSIKVVVTRRAGKLRFQFTGSDEEVKKAEKILADWN*
Ga0137398_111686182	3300012683	Vadose Zone Soil	MNSLQRHGIKEAHKQLYVRMKRDGLASIKVLVTRRAGKLKFNFTGSDEEVKKAEKIVADWN*
Ga0137397_112799881	3300012685	Vadose Zone Soil	MNSLQHHGVKEAHKQLHFRMKKSGLASIKVEVTRRAGKLKFNFTGLDGEVKQAEKILADWN*
Ga0137394_103227523	3300012922	Vadose Zone Soil	LCDCFVPAARRRLTMNSLQHHGVKEAHKQLHLRMQRNGLASIKVEVTRRAGKLQFNFTGSAAEVKQAEKILADWN*
Ga0137359_103416062	3300012923	Vadose Zone Soil	MNSLQHHGIKEAHKQLHFRMKRDGLKSIKVEVTRRAGKLRFNFTGSDEEVKQAEKILAGWS*
Ga0137419_104678081	3300012925	Vadose Zone Soil	QQHGIKEAHKQLQLRMKRSGLTSVKVEVTRRAGKLRFDFAGSVGEVKQAHKILADWN*
Ga0137419_105777911	3300012925	Vadose Zone Soil	MNSLQHHGIKEAHKQLHFRMKRDGLKSIKVEVTRRAGKLKVNFTGSDEEVKQAEKIFAGWS*
Ga0157374_111119132	3300013296	Miscanthus Rhizosphere	MNSLQQHGIKEAHKQLHFRMKRDGLDSIKVEVTRRAGKLQFNFTGDAPEVTKANQILANWT*
Ga0157378_126966601	3300013297	Miscanthus Rhizosphere	MNSLQQHGIKEAHKQLQLRMKMRGLSSIKVGVTRRAGKLKFAFTGSAGEVKQAEEILAAWN*
Ga0163162_133769591	3300013306	Switchgrass Rhizosphere	MNSLQRHGPHEAHKQLHLRMQRSGLSSVKVLVTRRAGKIKINFTGPDEEVKKAEQILADWN*
Ga0181530_100806311	3300014159	Bog	GIHEAHKQLHLRMQRSGLSSIKVQITRRAGKLRFHFAGLDEEVKKAEKILADWN*
Ga0181517_1000007163	3300014160	Bog	MYSLRQHGIHEAHKQLHFKMQRSGLSTVKVLVTRRAGKLRFNFTGSEDEVKKAEKILADWS*
Ga0182027_101817092	3300014839	Fen	MNSLQHHGIYEAHKQLHLRMQRSGLSSIKVLVTRRAGKMKFHFAGLDEEVKKAEKILADWN*
Ga0157376_102621793	3300014969	Miscanthus Rhizosphere	CLTMNSLQRHGPHEAHKQLHLRLQRSGLSSVKVLVTRRAGKIKIHFTGPDEEVKKAEQILADWN*
Ga0137418_107648522	3300015241	Vadose Zone Soil	MNSLQHHGIKEAQKQLRLRMKRTGLATIKVEVTRRAGKLRFNFTGSEDEVKQAEKILADWN*
Ga0137403_104160572	3300015264	Vadose Zone Soil	MNSLQHHGIKEAHKQLHFRMKRDGLKSIKVEVTRRAGKLRFNFTGSDEEVKQAEKILADWT*
Ga0182033_118261931	3300016319	Soil	MTSLQRHGIREAHKQLHVRMQRSGLSSIKVHVTRRAGKMKFHFTGSEEEVKKAEKILAD
Ga0182040_111288621	3300016387	Soil	QRHGIREAHKQLHLRMLRSGLSSVKVHVTRRAGKLRFHFTGSEEEVKKADKILADWN
Ga0182039_109347692	3300016422	Soil	AMTSLQRHGIREAHKQLHLRMQRSGLSSIKVHVTRRAGKMKFHFTGSEEEIKKAEKILADWN
Ga0181500_14425181	3300016728	Peatland	HGPHEAYKQLHLRMQRSGLASIKVLVTRRAGKLRFQFTGSEAEVIRAEQILADWN
Ga0187776_115303481	3300017966	Tropical Peatland	MTSLQRHGIREAHKQLHLRMQRSGLSSSKVHVTRRAGKMKFHFTGSEEEVKKAEKIL
Ga0181520_100077446	3300017988	Bog	MYSLRQHGIHEAHKQLHFKMQRSGLSTVKVLVTRRAGKLRFNFTGSEDEVKKAEKILADW
Ga0187880_13108571	3300018016	Peatland	MNSLQHHGIHEAHKQLHLRMQRSGLSSIKVQITRRAGKLRFHFAGLDDEVKKAEKILADW
Ga0187886_10370794	3300018018	Peatland	MNNLQHHGIHEAHKQLHLRMQRSGLSSIKVQVTRRAGKLQFHFAGLADEVKKAEKILADW
Ga0187889_102070612	3300018023	Peatland	MNSLQHHGIEEAHKQLHVRMQRSGLSSIKVLVTRRAGKMKFNFTGLDEEVKKAEKILADW
Ga0187862_106313351	3300018040	Peatland	MNSLQHHGIREAHKQLHLRMQRSGLSSIKVQITRRAGKLRFHFAGLDEEVKKAEKILADW
Ga0184628_100654102	3300018083	Groundwater Sediment	MTSLQHHGIKEAHKQLHFRMKKSGLASIKVEVTRRAGKLRFSFTGLDAEVKQAEKILADW
Ga0187771_102311082	3300018088	Tropical Peatland	MTSLQRHGIREAHKQLHLRMQRSGLSSIKVHVTRRAGKMKFHFTGSEEEVKKAEKILADW
Ga0193729_10023315	3300019887	Soil	MNSLQHHGIKEAHKQLLLRMKRTGLASIKVEVTRRAGKLRFNFTGSEGEVKQAEKILADW
Ga0180118_13217762	3300020063	Groundwater Sediment	HEAHKQLLLRMRRSGLSSIKVLVTRRAGKMQFHFTGLEEEVKKAEQILATWN
Ga0196970_10096912	3300020156	Soil	MKSLQQHSPHEVHKQLHLRMQRSGLSTVRVHVTRKAGKLQFHFTGSDEEVKKAEKILADW
Ga0194039_10597252	3300020163	Anoxic Zone Freshwater	MNSLQHHGIEEVHKQLHTRMQRNGLLSIKVLVTRRAGKMKFNFTGLDEEVKKAEKILADW
Ga0214088_13123602	3300020814	Granular Sludge	MTSLHRHSPREAHKQLHLCMQRSGLSSIEVHITRPVGKMHFHFTGLEAEVRKAEKILADW
Ga0210400_103323021	3300021170	Soil	MTSLQRHGPKEAYKQLHLRMQKSGLASVRVLVTRRAGKIRFNFTGSADEVQKAEKILADW
Ga0210400_112201312	3300021170	Soil	MNSLQRHGMHEAHKQLHLRMQRSGLSSIKVIVTRRAGKMKFSFSGSEDEVKKAERILADW
Ga0210394_100483282	3300021420	Soil	MHSLQRHGVKEAHKQLHLRMQRSGLSTIKVLVTRRAGKIRFNFTGSADEVPKAEKILADW
Ga0210409_1001006611	3300021559	Soil	MTSLQHHGPHEAHKQLHLRMQRTGLSSIKVHVTRRAGKLRFHFTGSDDEVKKAEKILAEW
Ga0079039_12915251	3300022185	Freshwater Wetlands	RRGSTMKSLERHGPEEAYKQLHLRMKRSGLTSIKVQVSRRAGRMKVHFTGSDEEVKKAEKILADWN
Ga0208102_10138602	3300025447	Freshwater	MNSLQHHGIEEVHKQLHTRMQRSGLSSIKVLVTRRAGKMKFNFTGLDEEVKKAEKILADW
Ga0209201_10266103	3300025708	Anaerobic Digestor Sludge	MTSLQRHSPREAHKQLHRCMQRSGLSSIEVHITRPAGKMHFHFTGLEAEVRKAEKILADW
Ga0207695_100678214	3300025913	Corn Rhizosphere	MHSLRQHGIHEAHKQLHLRMQRSGLSSIKVEVTRRAGKLDFHFTGSEEEVKKAEKILADW
Ga0207641_117831822	3300026088	Switchgrass Rhizosphere	MKSLQRHGLKEAHKQLRFRMQKSGLSSVKVQVTRRAGKLKFNFTGSDDEVKKAEKILADW
Ga0207683_109505252	3300026121	Miscanthus Rhizosphere	MNSLQQHGIKEAHKQLHFRMKRDGLASIKVEVTRRAGKLQFNFTGDAAEVTKANQILANW
Ga0207804_1263022	3300026849	Tropical Forest Soil	MTSLQRHGIREAHKQLHLRMQRSGLSTIKVHVTRRAGKMKFHFTGSEEEVKKAEKILADW
Ga0207822_10287871	3300026981	Tropical Forest Soil	AAGRCLAMTSLQRHGIREAHKQLHLRMQRRGLSTIKVHVTRRAGKLKFHFTGSEEEVKKAEKILADWN
Ga0207784_10263252	3300026997	Tropical Forest Soil	TSLQRHGIREAHKQLHLRMQRSGLSSIKVHVTRRAGKMKFHFTGSEEEVKKAEKILADWN
Ga0207777_10663352	3300027330	Tropical Forest Soil	MTSLQRHGIREAYKQLHLRMQRSGLSSIKVHVTRRAGKMKFHFTGSEEEVKKAEKILADW
Ga0207761_10092842	3300027516	Tropical Forest Soil	MTSLQRHGIHEAHKQLHLRMQRSGLSSIRVHVTRRAGKMKFHFTGSEEEVKKAEKILADW
Ga0207761_10389321	3300027516	Tropical Forest Soil	MTSLQRHGIREAHKQLHLRMQRSGLSSIKVHVTRRAGKMKFHFTGSEEEVKKAEKILA
Ga0209517_100109698	3300027854	Peatlands Soil	MISLQHHGLHEAHKQLRLRMQRSGLSSIKVEVTRRAGKLQFHFSGSEEEVKKAEKILADW
Ga0209517_101520183	3300027854	Peatlands Soil	MNSLQHHGLHEAYKQLHLRMQRSGLSSIKVQVSRRAGKLRFHFAGLDEEVKKAEKILADW
Ga0209166_101643511	3300027857	Surface Soil	MNSLQRHGIHEAHKQLHLRMQRSGLSTIKVIITRRAGKMKFSFTGSEEEVKKAERILAEW
Ga0209166_104783102	3300027857	Surface Soil	MNSLQRHGIHEAHKQLHLRMQRSGLSTIKVVVSRRAGKLQFSFAGSQEEVKKAERILADW
Ga0209293_104737782	3300027877	Wetland	MKSLERHGPEEAYKQLHLRMKRSGLTSIKVQVSRRAGRMKVHFTGSDEEVKKAEKILADW
Ga0209668_103548011	3300027899	Freshwater Lake Sediment	MNSLQHHGIEEAHKQLHTRMQRSGLSSIKVLVTRRAGKMKFNFTGLDEEVKKAEK
Ga0209048_110284522	3300027902	Freshwater Lake Sediment	MNSLQHHGIHEARKQLQFRVKRDGLSSVEVQVTRKSGKLQFHFTGSEEEVKKAEKMLAEW
Ga0209488_102224743	3300027903	Vadose Zone Soil	MNSSLQQHGIKEAHKQLRVRMKRDGLTSIKVEVTRRAGKLQFHFTGSAGEVKQAEKILADWN
Ga0209069_110347852	3300027915	Watersheds	MNSLQLHGTKEAQKQLSFRMKKSGLASIKVEVTRRAGKLRFHFTGSDVEVKEAEKILADW
Ga0265338_100382626	3300028800	Rhizosphere	MNSLQHHGIHEAHKQLHLRMQRSGLASIKVLVTRRAGKIRFNFTGSDEEVKKAEKILADW
Ga0311022_105187333	3300029799	Anaerobic Digester Digestate	MTSLQRHSPREAHKQLHLCMQRSGLSSIEVHITRPVGKMHFHFTGLEAEVRKAEKILADW
Ga0311361_112005192	3300029911	Bog	MISLQHHGINEAYKQLHARMKRSGLPSIKVEVTRRAGKMQFHFTGLPEEVKKAEKILADW
Ga0170824_1032420521	3300031231	Forest Soil	WFCYCLMLMPRSCLTMNSLQRHGPHEAHKQLHLRMQRSGLSSVKVLVTRRAGKIKINFTGLDEEVKKAQQILADWN
Ga0170824_1097573661	3300031231	Forest Soil	QRHGPHEAHKQLHLRMQRSGLSSVKVLVTRRAGKIKFNFTGIDEEVKKAEQILADWN
Ga0265316_111458722	3300031344	Rhizosphere	HGIHEAHKQLHLRMQRSGLASIKVLVTRRAGKIRFNFTGSDEEVKKAEKILADWN
Ga0170818_1002684492	3300031474	Forest Soil	MTSLQHHGIKEAHKQLHMRMKKTGLTTIKVGVTRRAGKLRFSFTGSDVEVKQAEKILADW
Ga0310813_100657864	3300031716	Soil	MNSLQHHGLHEAHRQLHLRMQRSGLSTVKVIVTRRAGKMKFSFTGSEDEVKKAEQILAEW
Ga0310916_103474153	3300031942	Soil	TSLQRHGIREAHKQLHLRMLRSGLSSVKVHVTRRAGKLRFHFTGSEEEVKKADKILADWN
Ga0306926_100114006	3300031954	Soil	MTSLQRHGIREAHKQLHLRMQRSGLPSIKVHVTRRAGKLKFHFTGSEEEVKKAEKILADW
Ga0307479_113532072	3300031962	Hardwood Forest Soil	MNSLQRHGIHEAHKQLHLRMQRSGLSSIKVIVTRRAGKMKFNFTGSEDEVKKAERILADW
Ga0315271_100364085	3300032256	Sediment	MNSLQHHGIHEAHKQLQLRMKRSGLSSIAVQVTRRAGKLQFHFTGSDEEVKKAEAILADW
Ga0315271_106084022	3300032256	Sediment	MNSLQHHGIHEARKQLQFRVKRDGLSSIVVEVTRKSGKLQFHFTGSDEEVKKAEKMLAEW
Ga0306920_1029949871	3300032261	Soil	MTSLQRHGIREAHKQLHLRMQKNGLSSIKVHVTRRAGKLRFHFTGSDEEVKKA
Ga0335078_111562332	3300032805	Soil	MTSLQRHGPHEAHKQLHLRMQRSGLSSIKVVVSRRAGKIRFQFTGSEEEVKKAEKILADW
Ga0335070_104284341	3300032829	Soil	LTARGCLNMNSLQHHGIHEAHKQLYLRMQRSGLSSIKVLVTRRAGKIRINFTGLEEEVKKAEQILANWN
Ga0335070_110949481	3300032829	Soil	MNSLQRHGIHEAHKQLHLRMQRSGLSTIKVIVTRRAGKMKFSFTGSEEEVKKAERILADW
Ga0335070_120215561	3300032829	Soil	MTSLQRHGPHEAHKQLHLRMQRSGLTSIKVIVTRRAGKLKFSFAGSEDQVKKAEKILMDW
Ga0335069_111851631	3300032893	Soil	MNSLQQHGIYEAHKQLHLRMQRSGLSSIKVLVTRRAGKMKFHFTGLDEEVKKAEKILADW
Ga0335069_122151532	3300032893	Soil	HEAHKQLHLRMQRSGLSSIKVIVTRRAGKLRFSFTGSEDEIKKAEKILADWS
Ga0335071_102546563	3300032897	Soil	MTSLQRHGPHEAYKQLHLRMQRSGLSSIKVVVTRRAGKLKFSFTGSEDEVKKAEKILADW
Ga0310914_105567461	3300033289	Soil	MTSLQRHGIREAHKQLHLRMQRNGLSSIKVHVTRRAGKLKFHFTGSQEEVKKAEKILADW
Ga0326728_101238033	3300033402	Peat Soil	MNSLQHHGIHEAHKQLHLRMQRSGLSSIKVQITRRAGKLRFHFAGLDEEVKKAEKILADW
Ga0326728_103512872	3300033402	Peat Soil	MNSLQQHGIHEAHKQLHLRMQRSGLSSIKVQVTRRAGKIRFHFAGSEEEVKKAEKILADW
Ga0326727_109580402	3300033405	Peat Soil	MNSLQHHGIHEAHKQLHLRMQRSGLSSIKVQVTRRAGKIRFHFTGAEEEVKKAEKILADW
Ga0310810_100009394	3300033412	Soil	MNSLQHHGLHEAHRQLHLRMQRSGLSTVKVIVTRRAGKMKFSFTGSEDEVKKAEQILAQW
Ga0310810_102394351	3300033412	Soil	MNSSLQKHGIKEAYKQLQVRMKRDGLTSIKVDVTRRAGKLKFAFTGSAGEVKKAEKILAEWN
Ga0316627_1008064152	3300033482	Soil	MISLQHHGIEEAHKQLHLRMKRNGLTSIKVIVTRRAGKLRFNFTGLEEEVKKAEQILADW
Ga0316628_1006195181	3300033513	Soil	MISLQHHGIHEAHKQLHLRMQQSGLSSIKVQVTRRAGKLRFHFIGLDDEVKKAEKILADW
Ga0316628_1022598771	3300033513	Soil	MHSLQRHSPKEAHKQLHLRMQRSGLASVRVNVTRRAGKLMFHFTGLDEEVKQAEKILADW
Ga0316616_1040448071	3300033521	Soil	GSTMKSLERHGPKEAYKQLHLRMKRSGLTSVKVLVSRRAGRMKFHFTGSDEEVKKAEKILADWN
Ga0316616_1042344381	3300033521	Soil	MHSLEQHGIHEAHRQLHLRMQRSGLRSIKVLITRRAGRLKFNFSGLDEEVKR
Ga0314861_0064522_1053_1214	3300033977	Peatland	MHEAHKQLHLRMRRSGLSSIKVHVTRRAGKLKFHFTGSEEEVKKAEKILADWN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056709

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences