Metagenome Family F056722

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056722
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	114 residues
Representative Sequence	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTPTEPTSPEHCVFCHWLRALGNGAPVATQLLAAEATQFIRVGELDSLVRTTSRLTLPSRAPPLV
Number of Associated Samples	99
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	45.99 %
% of genes near scaffold ends (potentially truncated)	52.55 %
% of genes from short scaffolds (< 2000 bps)	85.40 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (65.693 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (15.329 % of family members)
Environment Ontology (ENVO)	Unclassified (30.657 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (46.715 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 36.88% β-sheet: 0.00% Coil/Unstructured: 63.12%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.23
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.23
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF03372	Exo_endo_phos	13.14
PF01297	ZnuA	4.38
PF13620	CarboxypepD_reg	1.46
PF00676	E1_dh	1.46
PF11162	DUF2946	0.73
PF13779	DUF4175	0.73
PF06810	Phage_GP20	0.73
PF00491	Arginase	0.73
PF02779	Transket_pyr	0.73
PF11471	Sugarporin_N	0.73
PF12704	MacB_PCD	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0567	2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes	Energy production and conversion [C]	1.46
COG1071	TPP-dependent pyruvate or acetoin dehydrogenase subunit alpha	Energy production and conversion [C]	1.46
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	65.69 %
Unclassified	root	N/A	34.31 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	65.69 %
Unclassified	root	N/A	34.31 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	65.69 %
Unclassified	root	N/A	34.31 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	61.31 %
Unclassified	root	N/A	34.31 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	45.26 %
Unclassified	root	N/A	34.31 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.19 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.73 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.26 %
Unclassified	root	N/A	34.31 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2.19 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.73 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.26 %
Unclassified	root	N/A	34.31 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	2.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.26 %
Unclassified	root	N/A	34.31 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	45.26 %
Unclassified	root	N/A	34.31 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2.19 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.73 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000881\|JGI10215J12807_1066323	Not Available	645	Open in IMG/M
3300000956\|JGI10216J12902_101956675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	976	Open in IMG/M
3300000956\|JGI10216J12902_104908095	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1231	Open in IMG/M
3300000956\|JGI10216J12902_106244682	Not Available	646	Open in IMG/M
3300000956\|JGI10216J12902_111204747	Not Available	608	Open in IMG/M
3300000956\|JGI10216J12902_112472879	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	735	Open in IMG/M
3300000956\|JGI10216J12902_113066831	Not Available	740	Open in IMG/M
3300004114\|Ga0062593_100501802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1125	Open in IMG/M
3300004114\|Ga0062593_100987443	All Organisms → cellular organisms → Bacteria → Acidobacteria	861	Open in IMG/M
3300004114\|Ga0062593_101149508	Not Available	810	Open in IMG/M
3300004156\|Ga0062589_100407405	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1107	Open in IMG/M
3300004157\|Ga0062590_100536352	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1009	Open in IMG/M
3300004463\|Ga0063356_100117029	All Organisms → cellular organisms → Bacteria	2945	Open in IMG/M
3300004463\|Ga0063356_101120725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1136	Open in IMG/M
3300004480\|Ga0062592_100906302	All Organisms → cellular organisms → Bacteria → Acidobacteria	795	Open in IMG/M
3300005093\|Ga0062594_100062757	All Organisms → cellular organisms → Bacteria → Acidobacteria	1990	Open in IMG/M
3300005353\|Ga0070669_100855368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300005438\|Ga0070701_10397672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	872	Open in IMG/M
3300005444\|Ga0070694_100217433	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1432	Open in IMG/M
3300005444\|Ga0070694_100371520	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1113	Open in IMG/M
3300005545\|Ga0070695_100459770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	977	Open in IMG/M
3300005617\|Ga0068859_101559849	Not Available	729	Open in IMG/M
3300005719\|Ga0068861_100948063	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300005844\|Ga0068862_102341449	Not Available	546	Open in IMG/M
3300006196\|Ga0075422_10324828	Not Available	665	Open in IMG/M
3300006237\|Ga0097621_100459323	All Organisms → cellular organisms → Bacteria → Acidobacteria	1148	Open in IMG/M
3300006358\|Ga0068871_100676188	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300006844\|Ga0075428_100339661	All Organisms → cellular organisms → Bacteria	1613	Open in IMG/M
3300006845\|Ga0075421_100391836	All Organisms → cellular organisms → Bacteria → Acidobacteria	1670	Open in IMG/M
3300006845\|Ga0075421_101296008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300006853\|Ga0075420_101510971	Not Available	576	Open in IMG/M
3300006876\|Ga0079217_10309626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	880	Open in IMG/M
3300006880\|Ga0075429_100332031	All Organisms → cellular organisms → Bacteria → Acidobacteria	1331	Open in IMG/M
3300006894\|Ga0079215_11649846	Not Available	511	Open in IMG/M
3300006918\|Ga0079216_10016569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2669	Open in IMG/M
3300006954\|Ga0079219_10571742	All Organisms → cellular organisms → Bacteria	817	Open in IMG/M
3300006969\|Ga0075419_10693668	Not Available	722	Open in IMG/M
3300007004\|Ga0079218_10034963	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2962	Open in IMG/M
3300009078\|Ga0105106_10463468	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	912	Open in IMG/M
3300009094\|Ga0111539_10058211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4585	Open in IMG/M
3300009094\|Ga0111539_10274475	All Organisms → cellular organisms → Bacteria → Acidobacteria	1962	Open in IMG/M
3300009094\|Ga0111539_11502966	All Organisms → cellular organisms → Bacteria → Acidobacteria	781	Open in IMG/M
3300009098\|Ga0105245_13030821	Not Available	521	Open in IMG/M
3300009100\|Ga0075418_10963508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	923	Open in IMG/M
3300009147\|Ga0114129_10082948	All Organisms → cellular organisms → Bacteria	4454	Open in IMG/M
3300009156\|Ga0111538_10201558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2524	Open in IMG/M
3300009156\|Ga0111538_11269494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	930	Open in IMG/M
3300009156\|Ga0111538_12916587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300009156\|Ga0111538_14140530	Not Available	501	Open in IMG/M
3300009177\|Ga0105248_12738782	Not Available	562	Open in IMG/M
3300009610\|Ga0105340_1002274	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	8308	Open in IMG/M
3300010036\|Ga0126305_10157120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1418	Open in IMG/M
3300010399\|Ga0134127_13496359	Not Available	515	Open in IMG/M
3300010403\|Ga0134123_13425805	Not Available	513	Open in IMG/M
3300011402\|Ga0137356_1006586	All Organisms → cellular organisms → Bacteria → Acidobacteria	1987	Open in IMG/M
3300011415\|Ga0137325_1053766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300011430\|Ga0137423_1179240	Not Available	638	Open in IMG/M
3300011430\|Ga0137423_1203457	Not Available	592	Open in IMG/M
3300011434\|Ga0137464_1202138	Not Available	604	Open in IMG/M
3300012038\|Ga0137431_1073604	All Organisms → cellular organisms → Bacteria → Acidobacteria	946	Open in IMG/M
3300012164\|Ga0137352_1067471	Not Available	708	Open in IMG/M
3300012228\|Ga0137459_1058535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1098	Open in IMG/M
3300012910\|Ga0157308_10138973	Not Available	762	Open in IMG/M
3300012985\|Ga0164308_10661559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300012987\|Ga0164307_10113280	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1723	Open in IMG/M
3300013296\|Ga0157374_12424713	Not Available	552	Open in IMG/M
3300013308\|Ga0157375_12419835	Not Available	627	Open in IMG/M
3300013308\|Ga0157375_12999401	Not Available	564	Open in IMG/M
3300014326\|Ga0157380_10098372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2431	Open in IMG/M
3300014326\|Ga0157380_13275085	Not Available	518	Open in IMG/M
3300014876\|Ga0180064_1103393	Not Available	601	Open in IMG/M
3300014880\|Ga0180082_1138860	Not Available	561	Open in IMG/M
3300014885\|Ga0180063_1134116	Not Available	775	Open in IMG/M
3300014969\|Ga0157376_10674432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1036	Open in IMG/M
3300015371\|Ga0132258_10263866	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4217	Open in IMG/M
3300015371\|Ga0132258_12316097	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1347	Open in IMG/M
3300015372\|Ga0132256_100057263	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3644	Open in IMG/M
3300015373\|Ga0132257_103051980	Not Available	610	Open in IMG/M
3300018083\|Ga0184628_10421165	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300018083\|Ga0184628_10482039	Not Available	644	Open in IMG/M
3300018084\|Ga0184629_10353483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	774	Open in IMG/M
3300018469\|Ga0190270_10552021	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1111	Open in IMG/M
3300018469\|Ga0190270_12475244	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300018476\|Ga0190274_10148127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1975	Open in IMG/M
3300018476\|Ga0190274_10214002	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1709	Open in IMG/M
3300018476\|Ga0190274_11031718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300018476\|Ga0190274_11703612	Not Available	724	Open in IMG/M
3300018476\|Ga0190274_12704698	Not Available	593	Open in IMG/M
3300018481\|Ga0190271_12033844	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300018481\|Ga0190271_13015540	Not Available	565	Open in IMG/M
3300018481\|Ga0190271_13352704	Not Available	537	Open in IMG/M
3300018920\|Ga0190273_10425558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	944	Open in IMG/M
3300018920\|Ga0190273_10561206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852	Open in IMG/M
3300021081\|Ga0210379_10016809	All Organisms → cellular organisms → Bacteria → Acidobacteria	2736	Open in IMG/M
3300023057\|Ga0247797_1004800	All Organisms → cellular organisms → Bacteria → Acidobacteria	1462	Open in IMG/M
3300025917\|Ga0207660_11512358	Not Available	542	Open in IMG/M
3300025941\|Ga0207711_10916728	All Organisms → cellular organisms → Bacteria → Acidobacteria	814	Open in IMG/M
3300026075\|Ga0207708_10333659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1240	Open in IMG/M
3300026118\|Ga0207675_100954859	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300026121\|Ga0207683_10153220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2081	Open in IMG/M
3300027533\|Ga0208185_1014688	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1954	Open in IMG/M
3300027873\|Ga0209814_10504663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	536	Open in IMG/M
3300027880\|Ga0209481_10353543	Not Available	750	Open in IMG/M
3300027886\|Ga0209486_10016939	All Organisms → cellular organisms → Bacteria → Acidobacteria	3356	Open in IMG/M
3300027907\|Ga0207428_10007840	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	9713	Open in IMG/M
3300027907\|Ga0207428_10219395	All Organisms → cellular organisms → Bacteria → Acidobacteria	1426	Open in IMG/M
3300027909\|Ga0209382_11791427	Not Available	598	Open in IMG/M
3300028380\|Ga0268265_11301186	Not Available	727	Open in IMG/M
3300028380\|Ga0268265_12315677	Not Available	544	Open in IMG/M
3300028803\|Ga0307281_10302522	Not Available	597	Open in IMG/M
3300028809\|Ga0247824_10301179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	903	Open in IMG/M
3300031226\|Ga0307497_10321073	Not Available	717	Open in IMG/M
3300031538\|Ga0310888_10041686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2101	Open in IMG/M
3300031538\|Ga0310888_10421011	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	787	Open in IMG/M
3300031538\|Ga0310888_10535725	Not Available	704	Open in IMG/M
3300031538\|Ga0310888_10644853	Not Available	646	Open in IMG/M
3300031547\|Ga0310887_10222199	All Organisms → cellular organisms → Bacteria → Acidobacteria	1039	Open in IMG/M
3300031562\|Ga0310886_10019284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2697	Open in IMG/M
3300031562\|Ga0310886_10041895	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2015	Open in IMG/M
3300031847\|Ga0310907_10007509	All Organisms → cellular organisms → Bacteria → Acidobacteria	3229	Open in IMG/M
3300031847\|Ga0310907_10106990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1218	Open in IMG/M
3300031847\|Ga0310907_10536008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300031854\|Ga0310904_11389276	Not Available	511	Open in IMG/M
3300031944\|Ga0310884_10139894	All Organisms → cellular organisms → Bacteria → Acidobacteria	1237	Open in IMG/M
3300031995\|Ga0307409_100280107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1541	Open in IMG/M
3300032002\|Ga0307416_101131498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300032012\|Ga0310902_10434415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300032013\|Ga0310906_10081403	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1716	Open in IMG/M
3300032017\|Ga0310899_10023342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2029	Open in IMG/M
3300032017\|Ga0310899_10384525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300032075\|Ga0310890_10130298	All Organisms → cellular organisms → Bacteria → Acidobacteria	1632	Open in IMG/M
3300032075\|Ga0310890_10418428	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300032122\|Ga0310895_10027309	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1917	Open in IMG/M
3300032179\|Ga0310889_10752805	Not Available	511	Open in IMG/M
3300034115\|Ga0364945_0010604	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2368	Open in IMG/M
3300034147\|Ga0364925_0390276	Not Available	527	Open in IMG/M
3300034354\|Ga0364943_0318111	Not Available	591	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.96%
Host-Associated	Host-Associated	35.04%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.82%
Plants	Host-Associated → Plants	35.04%
Aquatic	Environmental → Aquatic	13.14%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.63%
Rhizosphere	Host-Associated → Plants → Rhizosphere	24.82%
Sediment	Environmental → Aquatic → Sediment	11.68%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.76%
Floodplain	Environmental → Terrestrial → Floodplain	2.19%
Freshwater	Environmental → Aquatic → Freshwater	1.46%
Roots	Host-Associated → Plants → Roots	1.46%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	11.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.84%
Loam	Environmental → Terrestrial → Soil → Loam	4.38%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.19%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.46%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.46%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.46%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.36%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	15.33%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	11.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	10.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.38%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.19%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.19%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.46%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	15.33%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	15.33%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.41%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	9.49%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.11%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.11%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.38%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.38%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.92%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.19%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.19%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.19%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.46%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.46%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.46%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.73%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.73%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.73%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011402	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT830_2	Environmental	Open in IMG/M
3300011415	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT469_2	Environmental	Open in IMG/M
3300011430	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT600_2	Environmental	Open in IMG/M
3300011434	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2	Environmental	Open in IMG/M
3300012038	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT800_2	Environmental	Open in IMG/M
3300012164	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT730_2	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014876	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10D	Environmental	Open in IMG/M
3300014880	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT660_16_10D	Environmental	Open in IMG/M
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300023057	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300028809	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10215J12807_10663231	3300000881	Soil	IGPLAHWPTHATVIGTLRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTTTEPTSPEHCVFCHWLRALGNGAPVATQLPAAEATQFIRVGELDSLVRTASRLALPSRAPPRV*
JGI10216J12902_1019566752	3300000956	Soil	LSSGARLGYGVGTLRFRSTPLIALSIVLVLASALGGLHAPDDSDAYAVPPGHQHADHDARFAAPTQPAAPDHCVFCHWLRALGNGAPVAAQLFAAEPVDFIRVGEPDGLVRTAARLALPSRAPPLG*
JGI10216J12902_1049080952	3300000956	Soil	LSIVLVLASALGGWHAPDDNDEYAAPAIHQHADHDARFAAPTQPTGPEHCALCHWLRAFGNGAPIAAQLFAASSFQFVGVGTFDSFVRTTSRLALPARAPPLA*
JGI10216J12902_1062446822	3300000956	Soil	VLAGSLGGWHAPDDSDQHAALAVHQHADHDARFAAPTQPAPEHCVFCHWLRALGSGAPVATHRFAAEAVQFTRAGELDSFVRTASRLALPSRAPPLV*
JGI10216J12902_1112047471	3300000956	Soil	VGTLRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTTTEPTSPEHCVFCHWLRALGNGAPVATQLPAAEATQFIRVGELDSLVRTTSRLNLPSRAPPLV*
JGI10216J12902_1124728791	3300000956	Soil	LRFRSKPLIALSIVLVLTGALGGWHAPDDTDEFAATVTHHHADHNARFTTPTAPTSPEHCVFCHWLRALGNGAPVATHLFAAEPIQFIRAGDFDHIVALTSRLALPSRAPPLA*
JGI10216J12902_1130668311	3300000956	Soil	LVLAGALGGWHAPDDNDEYAALTIHQHGDHDARFASPAQPTAPEHCVFCHWLRALGNGAPVAAALFAAEAVQFTRIGELDGIVRTTSRLALPSRAPPLV*
Ga0062593_1005018022	3300004114	Soil	LRFRSTPLVALSVVLVLASALGGWHMPDDRDEFAVPAVHHHADHDARFATQAGPTAPEHCAFCHWLRAFGNGAPVATQIFAAQSVQFILVGTLADSVRTTSRLALPSRAPPLV*
Ga0062593_1009874432	3300004114	Soil	CATVVGTLRFRSKPLIALSIVLVLASALGGWHAPDDSDDNVVPSVHQHADHDARFTTETQPTAPEHCAFCHWLRAFGNGAPVATQVFAAQPVQFIRIGTLVGRVRATSRLALPSRAPPLA
Ga0062593_1011495082	3300004114	Soil	IVLVLVGALGGWHTPDDSDDYAAAAVHQHTDHNARFTTPTEPTSPEHCVFCHWLRTLGNGAPVATQLFAAEASQFIRVGELDSLVRTTSRLALPSRAPPLV*
Ga0062589_1004074052	3300004156	Soil	LSPAPGSVTVVGTLRFRSTPLVALSIVLVLASALGGWHAPDDRDDFAVPVVHQHADHDARFANQTGPTAPEHCAFCHWLRALGNGAPVATQVLAAQSVQFIRVGTLAGRVRATSRLALPSRAPPLV*
Ga0062590_1005363522	3300004157	Soil	FRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTTTEPTSPEHCVFCHWLRALGNGAPVATQLPAAEATQFIRVGELDSLVRTASRLALPSRAPPRV*
Ga0063356_1001170293	3300004463	Arabidopsis Thaliana Rhizosphere	SRHLSPAARLGYGVGTLRFRSTPLIALSIVLVLASALGGLHAPDDSDAYAAPAGHQHADHDARFAAPAQPVAPDHCVFCHWLRALGNGAPVAAQLFAAEPVDFIRAGVPDGLVRTTSRLALPSRAPPLV*
Ga0063356_1011207251	3300004463	Arabidopsis Thaliana Rhizosphere	VVGTLRFRSKPLIALSIVLVLAGALGGWHAPDDNDEYRATAVHQHTDHNARFTTPTEPASPEHCVFCHWLRALGNGAPVATQLLAAEATQFIRLGELDGLVRTTSRLALPSRAPPLA
Ga0062592_1009063021	3300004480	Soil	TLRFRSKPLIALSIVLVLASALGGWHAPDDSDDNVVPSVHQHADHDARFTTETQPTAPEHCAFCHWLRAFGNGAPVATQVFAAQPVQFIRIGTLVGRVRATSRLALPSRAPPLA*
Ga0062594_1000627573	3300005093	Soil	LRFRSTPLVALSIVLVLASALGGWHAPDDRDDFAVPVVHQHADHDARFANQTGPTAPEHCAFCHWLRALGNGAPVATQVLAAQSVQFIRVGTLAGRVRATSRLALPSRAPPLV*
Ga0070669_1008553682	3300005353	Switchgrass Rhizosphere	VVGTLRFRSTPLVALSIVLVLASALGGWHAPDDRDDFAVPVVHQHADHDARFANQTGPTAPEHCAFCHWLRALGNGAPVATQVLAAQSVQFIRVGTLAGRV
Ga0070701_103976721	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	VTVVGTLRFRSTPLVALSIVLVLASALGGWHAPDDRDDFAVPVVHQHADHDARFANQTGPTAPEHCAFCHWLRALGNGAPVATQVLAAQSVQFIRVGTLAGRVRATSRLALPSRAPPLV*
Ga0070694_1002174331	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LRFRSKPLIALSIVLVLASALGGWHAPDDSDDNVVPSVHQHADHDARFTTETQPTAPEHCAFCHWLRAFGNGAPVATQVFAAQPVQFIRIGTLVGRV
Ga0070694_1003715202	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	LRFRSKPLVALSIVLVLASALGGWHAPDDNDETALPAVHQHADHDARFTATTQPTAPEHCAFCHWLRAFGNGAPVAGQVFAAQPVQFIIFGGLVGQVRTTSRLALPSRAPPLL*
Ga0070695_1004597701	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	IVLVLASALGGWHAPDDNDETALPAVHQHADHDARFTATTQPTAPEHCAFCHWLRAFGNGAPVASQVFAAQPVQFIIFGGLVGQVRTTSRLALPSRAPPLL*
Ga0068859_1015598492	3300005617	Switchgrass Rhizosphere	PALTTWQPYVTVVGTLRFRSKPLVALSIVLVLASALGGWHAPDDNDETALPAVHQHADHDARFTATTQPTAPEHCAFCHWLRAFGNGAPVAGQVFAAQPVQFIIFGGLVGQVRTTSRLALPSRAPPLL*
Ga0068861_1009480632	3300005719	Switchgrass Rhizosphere	LRFRSKPLVALSIVLVLASALGGWHAPDDNDETALPAVHQHADHDARFTATTQPTAPEHCAFCHWLRAFGNGAPVASQVFAAQPVQFIIFGGLVGQVRTTSRLALPSRAPPLL*
Ga0068862_1023414491	3300005844	Switchgrass Rhizosphere	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTTTEPTSPEHCVFCHWLRALGNGAPVATQLPAAEATQFIRVGELDSLVRTASRLALPSRAPPRA*
Ga0075422_103248282	3300006196	Populus Rhizosphere	IVLVLASALGGWHAPDDNDEYAAPAIHQHADHDARFAAPTQPTGPEHCALCHWLRAFGNGAPIAAQLFAASSFQFVGVGTFDSFVRTTSRLALPARAPPLA*
Ga0097621_1004593232	3300006237	Miscanthus Rhizosphere	PLAALSIVLVLASALGGWHAPDDRDEYATPAVHQHADHDAHFAAPTQPTAPEHCALCHWLRALGNGAPVATQVVAAQSAQFIRVGDFVGRVRTATQLTLPSRAPPLV*
Ga0068871_1006761881	3300006358	Miscanthus Rhizosphere	KSFTGCRLPAPRHLSPTPGSGTVVGTLRFRSKPLAALSIVLVLASALGGWHAPDDRDEYATPAVHQHADHDAHFAAPTQPTAPEHCALCHWLRALGNGAPVATQVVAAQSAQFIRVGDFVGRVRTATQLTLPSRAPPLV*
Ga0075428_1003396612	3300006844	Populus Rhizosphere	LRFRSKPLIALSIVLVLAGALGGWHAPDDNDEYRAPAVHQHTDHNARFTTPTEPTSPEHCVFCHWLRALGNGAPVATQLLGAEATPFIRVGELDSLVRTASRLALPSRAPPRV*
Ga0075421_1003918361	3300006845	Populus Rhizosphere	SIVLVLASALGGWHAPDDRDEYAAPAVHQHTDHNASFTTPTQPAPEHCVFCHWLRALGNGAPVATQRFAAEAARFIRADELDSFVRTASRLALPSRAPPLV*
Ga0075421_1012960082	3300006845	Populus Rhizosphere	LRFRSKPLVALSIVLVLASALGGWHAPDDRDDAPAAHQHADHDARFAPATDRTAPEHCAFCHWLRALGNGAPVATQLFAAETLHFIPVGERDSFVRTTAPLALPSRAPPLA*
Ga0075420_1015109711	3300006853	Populus Rhizosphere	RSKPLVALSIVLVLASALGGLHAPDDSDAYAAPPGHQHADHDARFAAPTQPAAPDHCVFCHWLRALGNGAPVAAQLFAAEPVDFIRAGEPDGLVRTTSRLALPSRAPPLV*
Ga0079217_103096261	3300006876	Agricultural Soil	LRFRSTPLIALSIVLVLASALGGLHAPDDSDAYPAPAGHQHADHDARFAAPTQPAAPDHCVFCHWLRALGNGAPVAAQLFAAERFDFIRVGEPDGLVRTTSRLALPSRAPPLV*
Ga0075429_1003320311	3300006880	Populus Rhizosphere	ALGGWHAPDDNDEYRAPAVHQHTDHNARFTTPTEPTSPEHCVFCHWLRALGNGAPVATQLLGAEATPFIRVGELDSLVRTTSRLALPSRAPPLA*
Ga0079215_116498461	3300006894	Agricultural Soil	VGTLGFRSKPLVALSIVLVLAGSLGGWHAPDDRDEHAARAMHQHADHNARFATPTQPTGPEHCVFCHWLRALGNGAPVAAQLFAAERFDFIRVGEPDGLVRTTSRLALPSRAPPLV*
Ga0079216_100165691	3300006918	Agricultural Soil	LSPAARLGYGVGTLRFRSTPLIALSIVLVLASALGGLHAPDDSDAYAAPAGHQHADHDARFAAPAQPVAPDHCVFCHWLRALGNGAPVAAQLFAAEPVDFIRAGVPDGLVRTTSRLALPSRAPPLV*
Ga0079219_105717422	3300006954	Agricultural Soil	VVSTLRFRSTPLIALSIVLVLASALGGWHAPDDSDEYAAPAVHQHADHNARFTTPTEPTSPEHCVFCHWLRALGNGAPVATQLFASAAVHFIRAGELDGIVRTTARLALPSRAPPLA*
Ga0075419_106936682	3300006969	Populus Rhizosphere	MARWPALVSGARLGYGVSTLRLRSKPLVALSIVLVLASALGGWHAPDDRDEYAAPAVHQHTDHNASFTTPTQPAPEHCVFCHWLRALGNGAPVATQRFAAEAARFIRADELDSFVRTASRLALPSRAPPLV*
Ga0079218_100349631	3300007004	Agricultural Soil	LSPAARLGYGVGTLRFRSTPLIALSIVLVLASALGGLHAPDDSDAYAAPAGHQHADHDARFAAPAQPVAPDHCVFCHWLRALGNGAPVAAQLFAAERFDFIRAGEPDGLVRTTSRLALPSRAPPLV*
Ga0105106_104634682	3300009078	Freshwater Sediment	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAALAVHQHTDHDARLATPTQPTAPEHCVFCHWLRALGNGAPVATQLFAAEPVQFIPVGDRDSFIRTTSRLALPSRAPPLV*
Ga0111539_100582113	3300009094	Populus Rhizosphere	VRFRSKPLAALSIVLVLASALGGWHAPDDNDEYAAPAIHQHADHDARFAAPTQPTGPEHCALCHWLRAFGNGAPIAAQLFAASSFQFVGVGTFDSFVRTTSRLALPARAPPLA*
Ga0111539_102744752	3300009094	Populus Rhizosphere	LRFRSKPLAALSIVLVLASALGGWHAPDDSDEYAAPPVHQHADHDARFATPTDPTAPEHCVFCHWLRALGNGAPVATALFAAEPIQFSPAGELDCVVRTASRLALPSRAPPLA*
Ga0111539_115029661	3300009094	Populus Rhizosphere	FRSKPLIALSIVLVLAGALGGWHAPDDNDEYRAPAVHQHTDHNARFTTPTEPTSPEHCVFCHWLRALGNGAPVATQLLGAEATPFIRVGELDSLVRTTSRLALPSRAPPLA*
Ga0105245_130308211	3300009098	Miscanthus Rhizosphere	VLVLASALGGWHAPDDRDEYATPAVHQHADHDAHFAAQTQPTAPEHCALCHWLRALGNCAPVATQVVAAQLAQFIRVGDFVGRVRTASQLTLPSRAPPLV*
Ga0075418_109635082	3300009100	Populus Rhizosphere	LIACRPDSLIGTLRFRSKPLIALSIVLVLAGALGGWHAPDDNDEYRAPAVHQHTDHNARFTTPTEPTSPEHCVFCHWLRALGNGAPVATQLLGAEAAQFIRVGELDSLVRTTSRLALPSRAPPRV*
Ga0114129_100829485	3300009147	Populus Rhizosphere	VSGARLGYGVGTLRLRSKPLVALSIVLVLASALGGWHAPDDRDEYAAPAVHQHTDHNASFTTPTQPAPEHCVFCHWLRALGNGAPVATQRFAAEAARFIRADELDSFVRTTSRLALPSRAPPLV*
Ga0111538_102015582	3300009156	Populus Rhizosphere	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTTTEPTSPEHCVFCHWLRALGNGAPVATQLPAAEATQFIRVGELDSLVRTASRLALPSRAPPRV*
Ga0111538_112694942	3300009156	Populus Rhizosphere	LRFRSTPLIALSIVLVLASALGGWHAPDDNDEFAVPAVHHHADHDARFTATTQPTAPEHCAFCHWLRALGNGAPVATQLFASEAIHFIRAGELDGIVRTTSRLALPSRAPPLA*
Ga0111538_129165871	3300009156	Populus Rhizosphere	LRFRSKPLAALSIVLVLASALGGWHAPDDNDEYGAPAIHQHADHDARFAAPTQPTGPEHCALCHWLRALGNGTPVAAQLFATQPVQFTRAGELDFLVHTTSRLTLPSRAPPLA*
Ga0111538_141405301	3300009156	Populus Rhizosphere	LRFRSKPLIALSIVLVLASALGGWHAPDDSDAVPAPHQHTDHDARFASPTEPTAPEHCVFCHWLRALGNGAPVATQLFAAERVHFIRVHELDGLVRAAARLAL
Ga0105248_127387821	3300009177	Switchgrass Rhizosphere	LRFRSKPLAALSIVLVLASALGGWHAPDDRDEYATPAVHQHADHDAHFAAQTQPTAPEHCALCHWLRALGNGAPVATQVVAAQLAQFIRVGDFVGRVRTATQLTLPSR
Ga0105340_10022747	3300009610	Soil	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTPTEPTSPEHCVFCHWLRALGNGAPVATQLLAAEATQFIRVGELDSLVRTTSRLTLPSRAPPLV*
Ga0126305_101571202	3300010036	Serpentine Soil	LRFRSAPLIALSIVLVLASALGGWHAPDDIDEYAATAIHQHADHDARFSTASQPTAPEHCALCHWLRAFGSGSPVSTQIVAAEAIRFITAGERNDFVRAASQLTLPSRAPPLA*
Ga0134127_134963591	3300010399	Terrestrial Soil	SRAPGSVTVVGTLRFRSAPLVALSIVLVLASALGGWHAPDDNDESALPAVHQHADHDARFTTTTPPTAPEHCAFCHWLRAFGNGAPVASQVFAAQSVHFISVRALVGQVRTTSRLALPSRAPPLA*
Ga0134123_134258051	3300010403	Terrestrial Soil	RFRSTPLVALSIVLVLASALGGWHAPDDRDDFAVPVVHQHADHDARFANQTGPTAPEHCAFCHWLRALGNGAPVATQVLAAQSVQFIRVGTLAGRVRATSRLALPSRAPPLV*
Ga0137356_10065862	3300011402	Soil	LRFRSKPLVALSIVLVLASALGGWHAPDDSDENVVAAVHQHADHDARFTTEAQPTAPEHCAFCHWLRAFGNGAPVATQAFAAQSVHVIRVGTLVGRVRTTSRLALPSRAPPLV*
Ga0137325_10537662	3300011415	Soil	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTPTEPTSPEHCVFCHWLRALGNGAPVATQLLTAEAVQFIRVGELDSFVRMTSRLALPSRAPPL
Ga0137423_11792402	3300011430	Soil	LRFRSKPLVALSIVLVLASALGGWHAPDDSDEYAAPAVHQHADHNARFATPTQPTGPEHCVFCHWLRALGSGAPVATQRFAAEPYQFIRAGKLDSSVR
Ga0137423_12034572	3300011430	Soil	GGWHAPDDSDENVVAAVHQHADHDARFTTEAQPTAPEHCAFCHWLRAFGNGAPVATQAFAAQSVHVIRVGTLVGRVRTTSRLALPSRAPPLV*
Ga0137464_12021382	3300011434	Soil	VLASALGGWHAPDDRDEYAALTVHQHADHDARFAAPTQPAPEHCVFCHWLRALGNGAPVATQLFAAEALQFIRVGELDSLVRTTSRLALSSRGPPLV*
Ga0137431_10736042	3300012038	Soil	LAFFPADNLTACQPVCLPCLTTCLPYATVVGTLRFRSKPLVALSIVLVLASALGGWHAPDDSDENVVAAVHQHADHDARFTTETQPTAPEHCAFCHWLRAFGNGAPVATQAFAAQSVHVIRVGTLVGRVRTTSRLALPSRAPPLV*
Ga0137352_10674712	3300012164	Soil	LRFRSKPLVALSIVLVLASALGGWHAPDDSDDTVVAAVHQHADHDARFTTETQPTAPEHCAFCHWLRAFGNGAPVATQAFAAQSVHVIRVGTLVGRVRTTSRLALPSRAPPLV*
Ga0137459_10585352	3300012228	Soil	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYPALAVHQHADHDARFATPPTQPTPPEHCVFCHWLRALGNGAPAATQLFAAEATQFIRVGELDSLVRTTSRLTLPSRAPPLV*
Ga0157308_101389731	3300012910	Soil	LRFRSTPLVALSIVLVLASALGGWHAPDDRDEYAAPAVHHHADHDARFATQSGPTAPEHCAFCHWLRAFGNGAPVATQIFAAQSVQFILVGTLADSVRTTSRLALPSRAPPLV*
Ga0164308_106615592	3300012985	Soil	SIVLVLASALGGWHAPDDRDEYATPAVHQHADHDAHFAAPTQPTAPEHCALCHWLRALGNGAPVATQVVAAQLAQFIRVGDFVGRVRTATQLTLPSRAPPLV*
Ga0164307_101132802	3300012987	Soil	LRFRSKPLAALSIVLVLASALGGWHAPDDRDEYATPAVHQHADHDAHFAAPTQPTAPEHCALCHWLRALGNGAPVATQVVAAQSAQFIRVGDFVGRVRTATQLTLPSRAPPLV*
Ga0157374_124247131	3300013296	Miscanthus Rhizosphere	LRFRSKPLAALSIVLVLASALGGWHAPDDRDEYATPAVHQHADHDAHFAAPTQPTAPEHCALCHWLRALGNGAPVATQVVAAQLAQFIRVGDFVGRVRTATQLTLPSRAPPLV*
Ga0157375_124198351	3300013308	Miscanthus Rhizosphere	VRFRSKPLVALTILLTLVGAMGGWHAPDDNDETALPAVHQHADHDARFTATTQPTAPEHCAFCHWLRAFGNGAPVASQVFAAQPVQFIIFGGLVGQVRTTSRLALPSRAPPLL*
Ga0157375_129994011	3300013308	Miscanthus Rhizosphere	LRFRSKPLVALSIVLVLASALGGWHAPDDRDEYATPAVHQHADHDAHFAAQTQPTAPEHCALCHWLRALGNGAPVATQVVAAQLAQFIRVGDFVGRVRTATQLTLPSRAPPLV*
Ga0157380_100983723	3300014326	Switchgrass Rhizosphere	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTTTEPTSPEHCVFCHWLRALGNGAPVATHLPAAEATQFIRVGELDSLVRTASRLALPSRAPPRV*
Ga0157380_132750851	3300014326	Switchgrass Rhizosphere	LPEARPGLFEGAGSVTVVGTLRFRSKPLAALSIVLVLASALGGWHAPDDSDEYAAPAIHQHADHDARFAAPTQPTAPEHCALCHWLRALGNGAPVATPLFAAQSIQFVRVTDLAGRVRTTSRLALPSRAPPLA*
Ga0180064_11033931	3300014876	Soil	KPLVALSIVLVLASALGGWHAPDDSDEYPALAVHQHADHDARFATPPTQPTPPEHCVFCHWLRALGNGAPAATQLFAAEAFQFVRIGKLDSSIRTTSRLALPSRAPPLV*
Ga0180082_11388601	3300014880	Soil	DNLTACQPVCLPCLTTCLPYATVVGTLRFRSKPLVALSIVLVLASALGGWHAPDDSDEYAAPAVHQHADHNARFTTPTEPTSPEHCVFCHWLRALGSGAPVATQRFAAEPFQFIRVGKLDSSVRTTSRLALSSRAPPLV*
Ga0180063_11341162	3300014885	Soil	PDCLTTCVTVVVTLRFRSTPLVTLSIVLVLAGALGGWHAPDDTDEYAALAAHHHADHDARFATPTQPTAPEHCVFCHWLRALGNGAPVATQLFAAEPLQFNPVGERDSFIRTTSRLALPSRAPPLV*
Ga0157376_106744321	3300014969	Miscanthus Rhizosphere	LRFRSKPLAALSIVLVLASALGGWHAPDDRDEYATPAVHQHADHDAHFAAQTQPTAPEHCALCHWLRALGNGAPVATQVVAAQSAQFIRVGDFVGRVRTATQLTLPSRAPPLV*
Ga0132258_102638662	3300015371	Arabidopsis Rhizosphere	LRFRSKPLAALSIVLVLASALGGWHAPDDRDEYALPAVHQHADHDARFAVQTQPTAPEHCALCHWLRAMGNGAPVATQVFAAEPVQFIRIHALAGRVRSTSQLCLPCRAPPLA*
Ga0132258_123160972	3300015371	Arabidopsis Rhizosphere	LRFRSKPLAALSIVLVLASALGGWHAPDDRDEYATPAVHQHADHDARFAAPTQPTAPEHCALCHWLRALGNGAPVATQAFAVESAQFIRVGAVVGRVRTTTQFALPSRAPPLV*
Ga0132256_1000572635	3300015372	Arabidopsis Rhizosphere	VALSIVLVLASALGGWHAPDDRDEFAVPAVHHHADHDARFATQAGPTAPEHCAFCHWLRAFGNGAPVATQIFAAQSVQFILVGTLADSVRTTSRLALPSRAPPLV*
Ga0132257_1030519801	3300015373	Arabidopsis Rhizosphere	PDDRDEYALPAVHQHADHDARFAVQTQPTAPEHCALCHWLRAMGNGAPVATQVFAAEPVQFIRIHALAGRVRSTSQLCLPCRAPPLA*
Ga0184628_104211651	3300018083	Groundwater Sediment	VVGTLRFRSKPLAALSIVLVLASALGGWHAPDDRDEYAAPAVHQHADHDARFAAPTPPTAPEHCALCHWLRALGNGAPVATPLFAAQSIQFVRVTDLAGRV
Ga0184628_104820392	3300018083	Groundwater Sediment	VTVVGTLRFRSRPLAALSIILVLASALGGWHAPDDNDDYAAPAVHHHADHDARFSAPTKPTGPEHCALCHWLRALGNGAPVATQVLATQSIQFVRIHAFVGRVRTTSRLALPSRAPPLA
Ga0184629_103534832	3300018084	Groundwater Sediment	VLGTLRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTPTEPTSPEHCVFCHWLRALGNGAPLATQLLAPEAVQFIRVGELDSFVRTTSRHALPSRAPPAV
Ga0190270_105520212	3300018469	Soil	LQFRSKPLVALSIVLVLAGALGGWHAPDDSDEYAVPAVHQHADHDARFTAPTEPPPEHCAFCHWLRALGNGAPVATQLIAAEPVRIIRSGEFDGFVRTTSRLALPSRAPPLV
Ga0190270_124752442	3300018469	Soil	MARWPDHPDGLMARDLSPAPGSVTVVGTLGFRSKPLVALSIVLVLAGSLGGWHAPDDRDEHAARAVHQHADHNARFATPTQPTGPEHCVFCHWLRALGNGAPVATQRFAAAAVQFVRVSELDSFVRTT
Ga0190274_101481272	3300018476	Soil	LGLPGLRAKPVTATVLGTLRFRSKPLIALSIVLVLAGALGGWHAPDDNDEYAAPAVHQHTDHNARFTSPTEPTSPEHCVFCHWLRALGNGAPVATQLFAAEVVRFTRVGELDSLVRTASRLALPSRAPPLV
Ga0190274_102140022	3300018476	Soil	LRFRSSPLVALSIVLVLASALGGWHAPDDQDEFAAPAIHQHADHDARFTTPSQPPPEHCAFCHWLRALGNGAPVATQVLAAQSVQFIRAGAFVDRVRATAQLSLPSRAPPLV
Ga0190274_110317181	3300018476	Soil	VIGRLGFRSKPLIALSIVLVLAGALGGWHAPDDNDDDYVSTVVHHHADHDARFASPSQVTTPEHCVFCHWLRALGNGAPVATTVLAADAVQFFRIAELDSFVRTASRLALPSRAPPLA
Ga0190274_117036122	3300018476	Soil	LRFRSKPLAALSIVLVLASALGGWHAPDDSDEFAAPAVHQHADHDARFAAPTQPTGPEQCALCHWLRALGSGAPVAAERFAAERIQFARAGTLDTFVRTASRLALPSRAPPLA
Ga0190274_127046981	3300018476	Soil	PAGLVWGGRVSYGVGTLRFRSKPLVALSIVLVLASALGGWHAPDDRDEYAAAALHQHADHDARFAAPTQPTAPAHCALCHWLRALGNGAPVATPLFAAQSIQFVRVTDLAGRVRTTSRLALPSRAPPLA
Ga0190271_120338441	3300018481	Soil	VVRTLGFRSKPLVALSIVLVLAGSLGGWHAPDDRDEHAAQAVHQHADHNARFTTPTQPTGPEHCVFCHWLRALGNGAPVATQLFASESVHFTRVGELDTFVRTTAR
Ga0190271_130155402	3300018481	Soil	SIVLVLAGALGSWHAPDDNDDFPAPAHQHADHDARFAAPTQPTAPEHCVFCHWLRALGNGAPGATQLFAAQRIQLTAVAELDGVVRTTARLALPSRAPPLA
Ga0190271_133527042	3300018481	Soil	FPLPPSPGSGTVIGTFRLRSSPFVVLSIVLVLASALGGWHAPDDQDEHAAPAIHQHADHDARFATPAQPAPEHCAFCHWLRAFGNGAPVATQVLAAQSVQFIRDGSLIGRVRATSRLALPSRAPPLA
Ga0190273_104255581	3300018920	Soil	IALSIVLVLAGALGGWHAPDDNDDYAATVVHHQHADHDARFGTATQPSGPEHCAFCHWVRVLGNGAPVATQRFAAEQAQFIGAGEFDSLVRTTSRLALPSRAPPLA
Ga0190273_105612062	3300018920	Soil	VIGRLGFRSKPLIALSIALVLTGALGGWHAPDDNDEYASTVVHQHADHDARFGTATQPSGPEHCAFCHWVRALGNGAPVATQRFAAEQVQYIRAGEFDSFVRTT
Ga0210379_100168092	3300021081	Groundwater Sediment	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYDAPAVHQHADHNARFTTPTEPTSPEHCVFCHWLRALGNGAPLATQLLAPEAVQFIRVGELDSFVRTTSRHALPSRAPPAV
Ga0247797_10048002	3300023057	Soil	HWPIGPLAHWPTHATVIGTLRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTTTEPTSPEHCVFCHWLRALGNGAPVATQLPAAEATQFIRVGELDSLVRTASRLALPSRAPPRV
Ga0207660_115123581	3300025917	Corn Rhizosphere	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTTTEPTSPEHCVFCHWLRALGNGAPVATQLPAAEATQFIRVGELDSLVRTASRLALPSRAPPRA
Ga0207711_109167281	3300025941	Switchgrass Rhizosphere	VPKPLSPAPGSGTVVGTLRFRSKPLAALSIVLVLASALGGWHAPDDRDEYATPAVHQHADHDAHFAAQTQPTAPEHCALCHWLRALGNGAPVATQVVAAQLAQFIRVGDFVGRVRTATQLTLPSRAPPLV
Ga0207708_103336592	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	LRFRSTPLVALSIVLVLASALGGWHAPDDRDDFAVPVVHQHADHDARFANQTGPTAPEHCAFCHWLRALGNGAPVATQVLAAQSVQFIRVGTLAGRVRATSRLALPSRAPPLV
Ga0207675_1009548592	3300026118	Switchgrass Rhizosphere	LRFRSKPLVALSIVLVLASALGGWHAPDDNDETALPAVHQHADHDARFTATTQPTAPEHCAFCHWLRAFGNGAPVAGQVFAAQPVQFIIFGGLVGQVRTTSRLALPSRAPPLL
Ga0207683_101532202	3300026121	Miscanthus Rhizosphere	LRFRSTPLVALSIVLVLASALGGWHAPDDRDEYAAPAVHHHADHDARFATQSGPTAPEHCAFCHWLRAFGNGAPVATQIFAAQSVQFILVGTLADSVRTTSRLALPSRAPPLV
Ga0208185_10146883	3300027533	Soil	VVGTLRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTPTEPTSPEHCVFCHWLRALGNGAPVATQLLAAEATQFIRVGELDSLVRTTSRLTLP
Ga0209814_105046632	3300027873	Populus Rhizosphere	MARWPALVSGARLGYGVSTLRLRSKPLVALSIVLVLASALGGWHAPDDRDEYAAPAVHQHTDHNASFTTPTQPAPEHCVFCHWLRALGNGAPVATQRFAAEAARFIRADELDSFVRTASRLALP
Ga0209481_103535432	3300027880	Populus Rhizosphere	MARWPALVSGARLGYGVSTLRLRSKPLVALSIVLVLASALGGWHAPDDRDEYAAPAVHQHTDHNASFTTPTQPAPEHCVFCHWLRALGNGAPVATQRFAAEAARFIRADELDSFVRTASRLALPSRAPPLV
Ga0209486_100169393	3300027886	Agricultural Soil	LSPAARLGYGVGTLRFRSTPLIALSIVLVLASALGGLHAPDDSDAYAAPAGHQHADHDARFAAPAQPVAPDHCVFCHWLRALGNGAPVAAQLFAAERFDFIRVGEPDGLVRTTSRLALPSRAPPLV
Ga0207428_100078403	3300027907	Populus Rhizosphere	VRFRSKPLAALSIVLVLASALGGWHAPDDNDEYAAPAIHQHADHDARFAAPTQPTGPEHCALCHWLRAFGNGAPIAAQLFAASSFQFVGVGTFDSFVRTTSRLALPARAPPLA
Ga0207428_102193952	3300027907	Populus Rhizosphere	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTTTEPTSPEHCVFCHWLRALGNGAPVATQLPAAEATQFIRVGELDSLVRTASRLALPSRAPPRV
Ga0209382_117914272	3300027909	Populus Rhizosphere	VGTLRFRSKPLVALSIVLVLASALGGWHAPDDRDDAPAAHQHADHDARFAPATDRTAPEHCAFCHWLRALGNGAPVATQLFAAETLHFIPVGERDSFVRTTAPLALPSRAPPLA
Ga0268265_113011861	3300028380	Switchgrass Rhizosphere	PDCLPALTTWQPYVTVVGTLRFRSKPLVALSIVLVLASALGGWHAPDDNDETALPAVHQHADHDARFTATTQPTAPEHCAFCHWLRAFGNGAPVAGQVFAAQPVQFIIFGGLVGQVRTTSRLALPSRAPPLL
Ga0268265_123156772	3300028380	Switchgrass Rhizosphere	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTTTEPTSPEHCVFCHWLRALGNGAPVATQLPAAEATQFIRVGELESLQIRYESQRTNSWFSKLTRGN
Ga0307281_103025221	3300028803	Soil	VIGTLRFRSKPLAALSIILVLASALGGWHTPDDNDDYAALAIHQHADHDARFSAPTKPTGPEHCALCHWLRALGNGAPVATQVLATQSIQFVRIHSFVGRVRTTSRLALPSRAPPLA
Ga0247824_103011791	3300028809	Soil	LVALSIVLVLAGALGGWHAPDDSNEYAVPAVHQHADHDARFTAPTEPPPEHCAFCHWLRALGNGAPVATQLIAAEPVRIIRSGEFDGFVRTTSRLALPSRAPPLV
Ga0307497_103210732	3300031226	Soil	GSVTVVGTLRFRSTPLVALSIVLVLASALGGWHAPDDRDEFAVPAVHHHADHDARFATQTGPTAPEHCAFCHWLRAFGNGAPVATQVFAAQSVQFIRVGAFVGRVRATSRLALPSRAPPL
Ga0310888_100416863	3300031538	Soil	LSPAPGSVTVVGTLRFRSTPLVALSIVLVLASALGGWHAPDDRDDFAVPVVHQHADHDARFANQTGPTAPEHCAFCHWLRALGNGAPVATQVLAAQSVQFIRVGTLAGRVRATSRLALPS
Ga0310888_104210111	3300031538	Soil	LRFRSKPLVALSIVLVLASALGGWHAPDDNDETALPAVHQHADHDARFTATTQPTAPEHCAFCHWLRAFGNGAPVASQVFAAQPVQFIIFGGLVGQVRTTSRLALPSRAPPLL
Ga0310888_105357252	3300031538	Soil	LRFRSKPLAALSIVLVLASALGGWHAPDDSDEYAAPPVHQHADHDARFATPTDPTAPEHCVFCHWLRALGNGAPVATALFAAEPIQFIPAGELDCVVRTASRLAVPSRAPPLV
Ga0310888_106448532	3300031538	Soil	GSVTVVGTLRFRSTPLVALSIVLVLASALGGWHAPDDRDEFAVPAVHQHADHDARFATQTEPTAPEHCAFCHWLRAFGNGAPAATQVLAAQSVQFIRVGALVGRVRATSRLALPSRAPPL
Ga0310887_102221992	3300031547	Soil	LRFRSTPLVALSIVLVLASALGGWHAPDDRDEFAVPAVHQHADHDARFATQTEPTAPEHCAFCHWLRAFGNGAPAATQVLAAQSVQFIRVGALVGRVRATSRLALPSRAPPLV
Ga0310886_100192842	3300031562	Soil	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTTTEPTSPEHCVFCHWLRALGNGAPVATQLPAAEATQFIRVGELDSLVRTTSRLALPSRAPPRV
Ga0310886_100418951	3300031562	Soil	LASALGGWHAPDDRDDFAVPVVHQHADHDARFANQTGPTAPEHCAFCHWLRALGNGAPVATQVLAAQSVQFIRVGTLAGRVRATSRLALPSRAPPLV
Ga0310907_100075093	3300031847	Soil	LSPAPGSVTVVGTLRFRSTPLVALSIVLVLASALGGWHAPDDRDDFAVPVVHQHADHDARFANQTGPTAPEHCAFCHWLRALGNGAPVATQVLAAQSVQFIRVGTLAGRVRATSRLALPSRAPPLV
Ga0310907_101069902	3300031847	Soil	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTPTEPTSPEHCVFCHWLRALGNGAPVATALFAAEPIQFIPAGELDCVVRTASRLAVPSRAPPLV
Ga0310907_105360082	3300031847	Soil	VVGTLRFRSTPLVALSIVLVLASALGGWHAPDDRDEFAVPAVHQHADHDARFATQTEPTAPEHCAFCHWLRAFGNGAPAATQVLAAQSVQFIRVGALVGR
Ga0310904_113892761	3300031854	Soil	LSPAPGSVTVVGTLRFRSTPLVALSIVLVLASALGGWHAPDDSDEYAATTVHQHADHDARFANQTGPTAPEHCAFCHWLRALGNGAPVATQVLAAQSVQFIRVGTLAGRVRATSRLALPSRAPPLV
Ga0310884_101398942	3300031944	Soil	YVTVVGTLRFRSKPLVALSIVLVLASALGGWHAPDDNDETALPAVHQHADHDARFATQTEPTAPEHCAFCHWLRAFGNGAPAATQVLAAQSVQFIRVGALVGRVRATSRLALPSRAPPLV
Ga0307409_1002801072	3300031995	Rhizosphere	LRFRSKPFIALSIVLVLASALGGWHAPEDTDEYAVPAVHHHADHDARLSTASQPTAPEHCALCHWLRAFGNGAPASTPLFGAVPIEVDRVGALADFVRTTTRLALPSRAPPLV
Ga0307416_1011314982	3300032002	Rhizosphere	VVGTLRFRSKPLVALSIVLVLASALGSWHAPDDNDEYAAATVHQHADHDARFSAPTHATAPEHCAFCHWLRAFGNGAPVAMQVFAAAPVHFIRAGDRDAFLRTASRLAL
Ga0310902_104344152	3300032012	Soil	VLASALGGWHAPDDNDETALPAVHQHADHDARFTATTQPTAPEHCAFCHWLRAFGNGAPVASQVFAAQPVQFIIFGGLVGQVRTTSRLALPSRAPPLL
Ga0310906_100814032	3300032013	Soil	LSPAPGSVTVVGTLRFRSTPLVALSIVLVLASALGGWHAPDDRDEFAVPAVHQHADHDARFATQTEPTAPEHCAFCHWLRAFGNGAPAATQVLAAQSVQFIRVGALVGRVRATSRLALPSRAPPLV
Ga0310899_100233422	3300032017	Soil	LSPAPGSVTVVGTLRFRSTPLVALSIVLVLASALGGWHAPDDRDEFAVPAVHQHADHDARFATQTEPTAPEHCAFCHWLRALGNGAPVATQVLAAQSVQFIRVGTLAGRVRATSRLALPSRAPPLV
Ga0310899_103845251	3300032017	Soil	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTTTEPTSPEHCVFCHWLRALGNGAPVATQLPAAEATQFIRVGELDSLVRTASRLALPSRAPP
Ga0310890_101302982	3300032075	Soil	LRFRSKPLVALSIVLVLASALGGWHAPDDNDETALPAVHQHADHDARFTATTQPTAPEHCAFCHWLRAFGNGAHVASQVFAAQPVQFIIFGGLVGQVRTTSRLALPSRAPPLL
Ga0310890_104184281	3300032075	Soil	TLRFRSTPLVALSIVLVLASALGGWHAPDDRDDFAVPVVHQHADHDARFANQTGPTAPEHCAFCHWLRALGNGAPVATQVLAAQSVQFIRVGTLAGRVRATSRLALPSRAPPLV
Ga0310895_100273093	3300032122	Soil	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTTTEPTSPEHCVFCHWLRALGNGAPVATHLPAAEATQFIRVGELDSLVRTASRLALPSRAPPRV
Ga0310889_107528052	3300032179	Soil	PLVALSIVLVLASALGGWHAPDDRDEFAVPAVHQHADHDARFATQTEPTAPEHCAFCHWLRAFGNGAPAATQVLAAQSVQFIRVGALVGRVRATSRLALPSRAPPLV
Ga0364945_0010604_236_577	3300034115	Sediment	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTPTEPTSPEHCVFCHWLRALGNGAPVATQLLAAEATQFIRVGELDSLVRTTSRLTLPSRAPPLV
Ga0364925_0390276_41_385	3300034147	Sediment	LRFRSKPLVALSIVLVLASALGGWHAPDDSDEYPALAVHQHADHDARFATPPTQPTPPEHCVFCHWLRALGNGAPAATQLFAAEAFQFVRIGKLDSSIRTTSRLALPSRAPPLV
Ga0364943_0318111_40_381	3300034354	Sediment	LRFRSKPLIALSIVLVLAGALGGWHAPDDSDEYAAPAVHQHADHNARFTTPTEPTSPEHCVFCHWLRALGNGAPLATQLLAPEAVQFIRVGELDSFVRTTSRHALPSRAPPAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056722

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences