Metagenome / Metatranscriptome Family F056797

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056797
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	81 residues
Representative Sequence	MPRRRNAERPGARLARSYLVMRAEQAADRQPVDSAPRLRGTVRLPRLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAGRG
Number of Associated Samples	94
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.85 %
% of genes near scaffold ends (potentially truncated)	35.04 %
% of genes from short scaffolds (< 2000 bps)	91.24 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.33

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.613 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (13.139 % of family members)
Environment Ontology (ENVO)	Unclassified (24.088 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (45.255 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 32.43% β-sheet: 9.91% Coil/Unstructured: 57.66%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.33
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.33
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF00171	Aldedh	32.85
PF13507	GATase_5	8.76
PF02806	Alpha-amylase_C	5.11
PF00072	Response_reg	2.19
PF05685	Uma2	1.46
PF02585	PIG-L	0.73
PF00152	tRNA-synt_2	0.73
PF02826	2-Hacid_dh_C	0.73
PF02769	AIRS_C	0.73
PF13556	HTH_30	0.73
PF13751	DDE_Tnp_1_6	0.73
PF00903	Glyoxalase	0.73
PF00454	PI3_PI4_kinase	0.73
PF02518	HATPase_c	0.73
PF00909	Ammonium_transp	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	32.85
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	32.85
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	32.85
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	5.11
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	5.11
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	5.11
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	1.46
COG0004	Ammonia channel protein AmtB	Inorganic ion transport and metabolism [P]	0.73
COG0017	Aspartyl/asparaginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.73
COG0173	Aspartyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	0.73
COG1190	Lysyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	0.73
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.73
COG2269	Elongation factor P--beta-lysine ligase (EF-P beta-lysylation pathway)	Translation, ribosomal structure and biogenesis [J]	0.73

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.61 %
Unclassified	root	N/A	31.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.61 %
Unclassified	root	N/A	31.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.61 %
Unclassified	root	N/A	31.39 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	56.93 %
Unclassified	root	N/A	31.39 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.73 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.73 %

Name	Rank	Taxonomy	Distribution
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	54.74 %
Unclassified	root	N/A	31.39 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.73 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.73 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.73 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	54.74 %
Unclassified	root	N/A	31.39 %
Candidatus Stahlbacteria	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Stahlbacteria	0.73 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.73 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.73 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	54.74 %
Unclassified	root	N/A	31.39 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.73 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.73 %
unclassified Candidatus Stahlbacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Stahlbacteria → unclassified Candidatus Stahlbacteria	0.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.73 %

Name	Rank	Taxonomy	Distribution
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	54.74 %
Unclassified	root	N/A	31.39 %
bacterium (Candidatus Stahlbacteria) CG23_combo_of_CG06-09_8_20_14_all_34_7	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Stahlbacteria → unclassified Candidatus Stahlbacteria → bacterium (Candidatus Stahlbacteria) CG23_combo_of_CG06-09_8_20_14_all_34_7	0.73 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.73 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.73 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004463\|Ga0063356_102855547	Not Available	744	Open in IMG/M
3300004463\|Ga0063356_105484491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	544	Open in IMG/M
3300005093\|Ga0062594_100755499	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300005093\|Ga0062594_101454848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	699	Open in IMG/M
3300005176\|Ga0066679_10280291	Not Available	1080	Open in IMG/M
3300005177\|Ga0066690_10317198	Not Available	1054	Open in IMG/M
3300005177\|Ga0066690_10444190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	878	Open in IMG/M
3300005177\|Ga0066690_11003536	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	525	Open in IMG/M
3300005178\|Ga0066688_10588400	Not Available	715	Open in IMG/M
3300005178\|Ga0066688_10943763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	529	Open in IMG/M
3300005181\|Ga0066678_10833900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	607	Open in IMG/M
3300005332\|Ga0066388_103460984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	806	Open in IMG/M
3300005332\|Ga0066388_106599805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	585	Open in IMG/M
3300005435\|Ga0070714_101768502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	604	Open in IMG/M
3300005445\|Ga0070708_100144308	Not Available	2210	Open in IMG/M
3300005445\|Ga0070708_101237030	Not Available	698	Open in IMG/M
3300005451\|Ga0066681_10239879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1097	Open in IMG/M
3300005467\|Ga0070706_100308548	Not Available	1476	Open in IMG/M
3300005471\|Ga0070698_100365562	Not Available	1375	Open in IMG/M
3300005471\|Ga0070698_100404086	Not Available	1299	Open in IMG/M
3300005471\|Ga0070698_100404273	Not Available	1299	Open in IMG/M
3300005471\|Ga0070698_101919519	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300005537\|Ga0070730_10033529	All Organisms → cellular organisms → Bacteria	3853	Open in IMG/M
3300005537\|Ga0070730_10060129	All Organisms → cellular organisms → Bacteria	2709	Open in IMG/M
3300005537\|Ga0070730_10199557	Not Available	1336	Open in IMG/M
3300005537\|Ga0070730_10205823	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Stahlbacteria → unclassified Candidatus Stahlbacteria → bacterium (Candidatus Stahlbacteria) CG23_combo_of_CG06-09_8_20_14_all_34_7	1312	Open in IMG/M
3300005542\|Ga0070732_10375514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	856	Open in IMG/M
3300005552\|Ga0066701_10086279	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1809	Open in IMG/M
3300005552\|Ga0066701_10140770	Not Available	1446	Open in IMG/M
3300005575\|Ga0066702_10350597	Not Available	898	Open in IMG/M
3300005598\|Ga0066706_11140181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	594	Open in IMG/M
3300005614\|Ga0068856_100951739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	877	Open in IMG/M
3300005719\|Ga0068861_100978632	Not Available	806	Open in IMG/M
3300005764\|Ga0066903_100443802	All Organisms → cellular organisms → Bacteria	2164	Open in IMG/M
3300005764\|Ga0066903_101269773	Not Available	1373	Open in IMG/M
3300005764\|Ga0066903_102153529	Not Available	1074	Open in IMG/M
3300005844\|Ga0068862_102346286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	545	Open in IMG/M
3300006028\|Ga0070717_10958022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	779	Open in IMG/M
3300006046\|Ga0066652_101085623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	758	Open in IMG/M
3300006175\|Ga0070712_100759499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	830	Open in IMG/M
3300006797\|Ga0066659_11076036	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	672	Open in IMG/M
3300006800\|Ga0066660_10284919	Not Available	1311	Open in IMG/M
3300006914\|Ga0075436_100964381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	639	Open in IMG/M
3300009012\|Ga0066710_100315858	Not Available	2295	Open in IMG/M
3300009012\|Ga0066710_102565894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	734	Open in IMG/M
3300009012\|Ga0066710_103518774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	592	Open in IMG/M
3300009088\|Ga0099830_10589913	Not Available	911	Open in IMG/M
3300009137\|Ga0066709_100044814	All Organisms → cellular organisms → Bacteria	4910	Open in IMG/M
3300009137\|Ga0066709_104337675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	517	Open in IMG/M
3300009147\|Ga0114129_11166649	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300009147\|Ga0114129_13451228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300009177\|Ga0105248_13072705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	531	Open in IMG/M
3300009840\|Ga0126313_11413786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	577	Open in IMG/M
3300010038\|Ga0126315_10748353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	641	Open in IMG/M
3300010154\|Ga0127503_10543883	Not Available	1011	Open in IMG/M
3300010166\|Ga0126306_10458657	Not Available	1003	Open in IMG/M
3300010166\|Ga0126306_11239444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	614	Open in IMG/M
3300010358\|Ga0126370_11415719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	657	Open in IMG/M
3300010358\|Ga0126370_11669603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	612	Open in IMG/M
3300010359\|Ga0126376_12140794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	603	Open in IMG/M
3300010360\|Ga0126372_11946593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	633	Open in IMG/M
3300010398\|Ga0126383_10148738	Not Available	2181	Open in IMG/M
3300010937\|Ga0137776_1462106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	676	Open in IMG/M
3300011270\|Ga0137391_10159514	Not Available	1966	Open in IMG/M
3300011270\|Ga0137391_10837064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	756	Open in IMG/M
3300011270\|Ga0137391_10897522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	725	Open in IMG/M
3300011996\|Ga0120156_1082652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	584	Open in IMG/M
3300012014\|Ga0120159_1199602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	534	Open in IMG/M
3300012096\|Ga0137389_11829076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300012189\|Ga0137388_11028247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	760	Open in IMG/M
3300012207\|Ga0137381_10880506	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	775	Open in IMG/M
3300012208\|Ga0137376_11800343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300012209\|Ga0137379_10290541	Not Available	1546	Open in IMG/M
3300012210\|Ga0137378_10020049	All Organisms → cellular organisms → Bacteria	5852	Open in IMG/M
3300012211\|Ga0137377_10729282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	925	Open in IMG/M
3300012212\|Ga0150985_101720647	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1247	Open in IMG/M
3300012212\|Ga0150985_105088153	Not Available	621	Open in IMG/M
3300012212\|Ga0150985_107689918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	661	Open in IMG/M
3300012212\|Ga0150985_111529500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	553	Open in IMG/M
3300012212\|Ga0150985_111735953	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300012212\|Ga0150985_121059067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	572	Open in IMG/M
3300012285\|Ga0137370_10452193	Not Available	782	Open in IMG/M
3300012357\|Ga0137384_10669176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	844	Open in IMG/M
3300012469\|Ga0150984_112071638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	528	Open in IMG/M
3300012532\|Ga0137373_10889702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	654	Open in IMG/M
3300014052\|Ga0120109_1115750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	623	Open in IMG/M
3300014058\|Ga0120149_1076407	Not Available	874	Open in IMG/M
3300014969\|Ga0157376_12840795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	524	Open in IMG/M
3300015371\|Ga0132258_12565716	All Organisms → cellular organisms → Bacteria	1274	Open in IMG/M
3300015372\|Ga0132256_102511346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	617	Open in IMG/M
3300015374\|Ga0132255_104768835	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	574	Open in IMG/M
3300016319\|Ga0182033_11363876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	638	Open in IMG/M
3300018433\|Ga0066667_10189025	Not Available	1500	Open in IMG/M
3300018468\|Ga0066662_10475359	All Organisms → cellular organisms → Bacteria	1129	Open in IMG/M
3300018468\|Ga0066662_10745132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	942	Open in IMG/M
3300018468\|Ga0066662_12350786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	560	Open in IMG/M
3300018482\|Ga0066669_10150265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	1713	Open in IMG/M
3300018482\|Ga0066669_10918442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	785	Open in IMG/M
3300020070\|Ga0206356_10953015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	724	Open in IMG/M
3300021358\|Ga0213873_10321478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	503	Open in IMG/M
3300021362\|Ga0213882_10023747	Not Available	2341	Open in IMG/M
3300021362\|Ga0213882_10222652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	780	Open in IMG/M
3300021362\|Ga0213882_10355587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	616	Open in IMG/M
3300021384\|Ga0213876_10089726	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1628	Open in IMG/M
3300021388\|Ga0213875_10079701	Not Available	1528	Open in IMG/M
3300021388\|Ga0213875_10087176	Not Available	1456	Open in IMG/M
3300021388\|Ga0213875_10187652	All Organisms → cellular organisms → Bacteria	972	Open in IMG/M
3300021388\|Ga0213875_10488873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	591	Open in IMG/M
3300021388\|Ga0213875_10607121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	529	Open in IMG/M
3300021432\|Ga0210384_11795367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	519	Open in IMG/M
3300021560\|Ga0126371_13555409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	526	Open in IMG/M
3300021861\|Ga0213853_10967452	Not Available	1267	Open in IMG/M
3300021861\|Ga0213853_11546605	Not Available	1888	Open in IMG/M
3300021953\|Ga0213880_10158821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	620	Open in IMG/M
3300025910\|Ga0207684_10529974	Not Available	1008	Open in IMG/M
3300025910\|Ga0207684_10764938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	818	Open in IMG/M
3300025910\|Ga0207684_11369292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	580	Open in IMG/M
3300025939\|Ga0207665_10229035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1365	Open in IMG/M
3300025945\|Ga0207679_10887777	Not Available	815	Open in IMG/M
3300025960\|Ga0207651_11135476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	701	Open in IMG/M
3300026095\|Ga0207676_10893578	Not Available	871	Open in IMG/M
3300026118\|Ga0207675_101178213	Not Available	786	Open in IMG/M
3300026317\|Ga0209154_1204450	Not Available	756	Open in IMG/M
3300026325\|Ga0209152_10402194	Not Available	538	Open in IMG/M
3300026550\|Ga0209474_10756609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	507	Open in IMG/M
3300026555\|Ga0179593_1137806	Not Available	4582	Open in IMG/M
3300027857\|Ga0209166_10009467	All Organisms → cellular organisms → Bacteria	6380	Open in IMG/M
3300027857\|Ga0209166_10135459	Not Available	1351	Open in IMG/M
3300027857\|Ga0209166_10358617	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	761	Open in IMG/M
3300027862\|Ga0209701_10463588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	695	Open in IMG/M
3300027875\|Ga0209283_10314657	Not Available	1031	Open in IMG/M
3300028536\|Ga0137415_10860185	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	717	Open in IMG/M
3300028790\|Ga0307283_10128463	Not Available	684	Open in IMG/M
3300031231\|Ga0170824_117046940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	644	Open in IMG/M
3300031421\|Ga0308194_10213018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	631	Open in IMG/M
3300031520\|Ga0272428_1000613	All Organisms → cellular organisms → Bacteria	83242	Open in IMG/M
3300032008\|Ga0318562_10471227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	729	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.37%
Host-Associated	Host-Associated	22.63%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.45%
Plants	Host-Associated → Plants	22.63%
Aquatic	Environmental → Aquatic	2.92%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.95%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.30%
Roots	Host-Associated → Plants → Roots	4.38%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	2.92%
Freshwater	Environmental → Aquatic → Freshwater	2.19%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.73%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.93%
Loam	Environmental → Terrestrial → Soil → Loam	13.87%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.11%
Unclassified	Host-Associated → Plants → Roots → Unclassified	4.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.38%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	2.92%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.92%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.46%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.73%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.73%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.17%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.11%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	4.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.38%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.65%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.92%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.92%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	2.92%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.92%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.46%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.73%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.73%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	13.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.49%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.03%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.84%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.38%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	4.38%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	4.38%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.65%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.92%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.92%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	2.92%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.92%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.19%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.46%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.46%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.46%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.73%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.73%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.73%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.73%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011996	Permafrost microbial communities from Nunavut, Canada - A39_65cm_12M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300014052	Permafrost microbial communities from Nunavut, Canada - A23_35cm_12M	Environmental	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021362	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R09	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021953	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R07	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031520	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063356_1028555471	3300004463	Arabidopsis Thaliana Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQGADRQPSESGPKLRGTVRMPRLAAVQLNSPEAHAQYRLAILARLATGGAPWFTLALAK*
Ga0063356_1054844912	3300004463	Arabidopsis Thaliana Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQCADRQPRDATPRLRGTVRLPRLGAVQLNSPEAHAQYRLAVLARLATGGAPWFSLAVS*
Ga0062594_1007554992	3300005093	Soil	MPRRRNAERPGARLARSYLVMRAEQGAELQPNEAAAKLHGTVRMPRLATIQLNSPEAHAQYRLAVLARLATGGAPWFTLALQ*
Ga0062594_1014548482	3300005093	Soil	MPRRRNAERPGARLARSYLVMRAEQGADRQPAEAQSRLRGTVRLPRLATIQLNSPEAHAQYRLAILARLATGGAPWFTLALSS*
Ga0066679_102802911	3300005176	Soil	MPRRRKAERPGGRLARSYLIMRAEQTADRQPKEAAPKLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTLADSA*
Ga0066690_103171981	3300005177	Soil	RNAERPGARLARSYLVMRAEQAADRQPSDSAPRLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTLARSR*
Ga0066690_104441902	3300005177	Soil	MPRRRNAERPGARLARSYLVMRAEQWADRQPNDQPPQLRGIVRLPRLVTVQLNSPEAHAQYRLAVLARLATGGAPWFTLALGN*
Ga0066690_110035362	3300005177	Soil	MPRRRKAERPGGRLARSYLIMRAEQTADRQPKEAAPKLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTLA
Ga0066688_105884002	3300005178	Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPVDSAPRLRGTVRLPRLVSVQLNSPEAHAQYRLAILARLATGGA
Ga0066688_109437631	3300005178	Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPSDSAPRLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTLARSR*
Ga0066678_108339002	3300005181	Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPHDPAPRLRGTVRLPKLVAVQLNSPEAHAQYRLAILARLATGGAPWFTLAFGA*
Ga0066388_1034609842	3300005332	Tropical Forest Soil	MPRRRNAERPGARLARSYLVMRAEQGADRQPNEAGPKLRGTVRLPRLISVQLNSPEAHAQYRLAILARLATGGAPWFTLANTR*
Ga0066388_1065998052	3300005332	Tropical Forest Soil	PGARLARSYLVMRAEQAADRQPDEAPLRLRGTVRLPKLASVQLNSPEAHAQYRLGILARLATGGAPWFTLANA*
Ga0070714_1017685021	3300005435	Agricultural Soil	MPRRRNAERPGARLARSYLVMRAEQWADRQPDASARGTVRLPRLIAVQLNSPEAHAQYRLGILARVATGGAKWFILARA*
Ga0070708_1001443082	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRRNAERPGGRLARSYLVMRAEQTADRQPKDGAPKLRGTVRLPRLISIQLNSPEAHAQYRLAILARLATGGAPWFTLADSK*
Ga0070708_1012370302	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRRNAERPGGRLARSYLVMRAEQSADRQPKDAAPKLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLAT
Ga0066681_102398792	3300005451	Soil	MPRRRNAERPGARLARSYLVMRAEQTADRQPKDAAPKLRGTVRLPRLVSLQLNSPEAHAQYRLAILARLATGGAPWFTLADSA*
Ga0070706_1003085483	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQWADHQPDDQPPQLHGTVRLPRLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLASS*
Ga0070698_1003655621	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MARRRNAERPGGRLARSYLVMRAEQTADRQPKDGAPKLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTL
Ga0070698_1004040863	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRRNAERPGGRLARSYLVMRAEQTADRQPKDGAPKVRGTVRLPRLISIQLNSPEAHAQYRLAILARLATGGAPWFTLADSK*
Ga0070698_1004042732	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQAADRQPDDQATRLRGTVRLPRLVAVQLNSPEAHAQYRLAILARLATGGAPWFTLAMGR*
Ga0070698_1019195191	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQGADRQPNNSGPKLRGTVRMPRLAAVQLNSPEAHAQYRLAILARLATGGAPWFT
Ga0070730_100335294	3300005537	Surface Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPHDPAPRLRGTVRLPKLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAPGA*
Ga0070730_100601294	3300005537	Surface Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPHDPAPRLRGTVRLPKLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAFGS*
Ga0070730_101995571	3300005537	Surface Soil	MPRRRNAERPGARLARSYLVMRAEQTADRQPKESAPKLRGTVRLPRLVSVQLNSPEAHAQYRLAILA
Ga0070730_102058232	3300005537	Surface Soil	MPRRRNAERPGARLARSYLVMRAEQTTDRQPRDAAPKLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTLADSA*
Ga0070732_103755142	3300005542	Surface Soil	MPRRRNAERPGARLARSYLVMRAEQWADRQPKDRSARVQGTVRLPRLMAVQLNSPEAHAQYRLGILARVATGGAKWFLLAQA*
Ga0066701_100862792	3300005552	Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPVDSAPRLRGTVRLPRLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAGRG*
Ga0066701_101407702	3300005552	Soil	MPRRRNAERPGARLARSYLVMRAEQGADRQPSDSAPRLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTLAVSR*
Ga0066702_103505971	3300005575	Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPSDSAPRLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFT
Ga0066706_111401811	3300005598	Soil	ERPGARLARSYLVMRAEQWADRQPRDPSAKLRGTVRLPRLVAVQLNSPEAHAQYRLGILARLATSGARWFTLATA*
Ga0068856_1009517392	3300005614	Corn Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQAADRQPHDPAPRLRGTVRLPKLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAFGA*
Ga0068861_1009786322	3300005719	Switchgrass Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQGADRQPSESGPKLRGTVRMPRLAAVQLNSPEAHAQYRLALLARLATGGAP
Ga0066903_1004438023	3300005764	Tropical Forest Soil	ARLARSYLVMRAEQWMDRQPAEPRLRGTVRLPKLISVQLNSPEAHAQYRLGILARLATGGARWFLLAQGWR*
Ga0066903_1012697732	3300005764	Tropical Forest Soil	MPRRRNAERPGARLARSYLVMRAEQGADRQPSDSAPRLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTLAGNR*
Ga0066903_1021535291	3300005764	Tropical Forest Soil	MPRRRRADRPGARLARSYLLMRAEQCADRQPSEIGLKLRGTVRLPRLAAVQLNSPEAHAQYRLAILARLATGGAPWFTLARAISK*
Ga0068862_1023462861	3300005844	Switchgrass Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQGADRQPNESGPKLRGTVRMPRLAAVQLNSPEAHAQYRLAILARL
Ga0070717_109580222	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQWMDRQPAEPQVRGTVRLPRLMAVQLNSPEAHAQYRLGILARLATGGARWFLLAQGSR*
Ga0066652_1010856232	3300006046	Soil	MPRRRNAERPGARLARSYLVMRAEQWADRQPRDPSAKLRGTVRLPRLVAVQLNSPEAHAQYRLGILARLATSGARWFTLATA*
Ga0070712_1007594991	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	ERPGARLARSYLVMRADQWADRQPTDPSSRLGGTVRLPRLMSVQLNSPEAHAQYRLGILARLATGGARWFTLAK*
Ga0066659_110760362	3300006797	Soil	MPRRRNAERPGGRLARSYLVMRAEQTADRQPKDAAPKLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTLADSV*
Ga0066660_102849192	3300006800	Soil	MPRRRNAEPPGARLARSYLVMRAEQWADRQPNDQLPRLRGTVRLPRLGSVQLNSPEAHAQYRLAVLARLATGGAQWFTLANGPA*
Ga0075436_1009643811	3300006914	Populus Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQAADRQPDDQATRLRGTVRLPRLVAVQLNSPEAHAQYRLAILARLATGGAPWFT
Ga0066710_1003158585	3300009012	Grasslands Soil	DLREDSVPRRRNAERPGGRLARSYLVMRAEQTADRQPKDAAPKLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTLADSV
Ga0066710_1025658941	3300009012	Grasslands Soil	MPRRRNAERPGARLARSYLVMRAEQTADRQPKDAAPKLRGTVRLPRLVSLQLNSLEAHAQYRLAILARLATGGAPWFTLADSA
Ga0066710_1035187741	3300009012	Grasslands Soil	MPVPRRRNAERPGARLARSYLLMRAEQSADRQPHDSLPRLRGTVRLPRLVSVQLNSPEAHTQYRLSILARLATGG
Ga0099830_105899132	3300009088	Vadose Zone Soil	MSRRRNAERPGARLARSYLVMRAEQAVDRQPHDSSPKLRGTVRLPRLVAVQLNSPEAHAQYRLAILARLATGGAPWFTLAGST*
Ga0066709_1000448144	3300009137	Grasslands Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPVDSAPRLRGTVRLPRLVSIQLNSPEARAQYRLAILARLATGGAPWFTLAGRG*
Ga0066709_1043376752	3300009137	Grasslands Soil	MPVPRRRNAERPGARLARSYLVMRAEQAADRQPHDSAPRLRGTVRLPKLVSVQLNSPEAHAQYRLAILARLATGGAPWF
Ga0114129_111666492	3300009147	Populus Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQGADRQPAEAASKLRGTIRMPRLATVQLNSPEAHAQYRLAILARLATGGAPWFTLALSG*
Ga0114129_134512281	3300009147	Populus Rhizosphere	ERPGARLARSYLVMRAEQSADRQPAEGGPKLRGTVRLPRLAAVQLNSPEAHAQYRLAILARLATGGATWFTLARTF*
Ga0105248_130727052	3300009177	Switchgrass Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQGADRQPSESGPKLRGTVRMPRLAAVQLNSPEAHAQYRLAILARLATGGAPWFTLAFGAL*
Ga0126313_114137861	3300009840	Serpentine Soil	MPRQRNADRPGARLARSYLVMRAEQAADRQPNDTSPKLRGTVRLPRLISVQLNSPEAHAQYRLGILARLATGGAQWFTLAGSR*
Ga0126315_107483532	3300010038	Serpentine Soil	MPRRRNAERPGARLARSYLVMRAEQGADRQPAEAASKLRGTIRMPRLATVQLNSPEAHAQYRLAILARLATGGAPWFTLALSS*
Ga0127503_105438831	3300010154	Soil	RRKGDRPGARLARSYLVVRADQSADRQPERAQPALTSTVRLPRLDAVQLNSPEAHAQYRLAVLARLATGGAHWFVLAAGSR*
Ga0126306_104586572	3300010166	Serpentine Soil	MPRRRNAERPGARLARSYLVMRAEQCADRQPRDATSRLRGTVRLPRLGAVQLNSPEAHAQYRLAVLARLATGGAPWFTLAVS*
Ga0126306_112394442	3300010166	Serpentine Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPNDTSPKLRGTVRLPRLVSVQLNSPEAHAQYRLGILARLATGGAQWFTLARSR*
Ga0126370_114157192	3300010358	Tropical Forest Soil	MPRRRRADRPGARLARSYLLMRAEQCADRQPSEIGLKLRGTVRLPRLAAVQLNSPEAHAQYRLAILARLATGGAPWFTLARAS*
Ga0126370_116696031	3300010358	Tropical Forest Soil	MPRRRNAERPGARLARSYLVMRAEQWADRQPEPNPRLRGTVRLPRLMAVQLNSPEAHAQYRLGILARVATGGAKWFTLARA*
Ga0126376_121407942	3300010359	Tropical Forest Soil	MPRRRNAERPGARLARSYLVMRAEQWADRQPDDPSSRLRGTVRLPRLMAVQLNSPEAHAQYRLGILARLATGGARWFMLARA*
Ga0126372_119465932	3300010360	Tropical Forest Soil	MPRRRNAERPGARLARSYLVMRAEQGADRQPNEAGPKLRGTVRLPRLISVQLNSPEAHAQYRLAILARLATGG
Ga0126383_101487381	3300010398	Tropical Forest Soil	MPRRRRADRPGARLARSYLLMRAEQCADRQPSEIGLKLRGTVRLPRLAAVQLNSPEAHAQYRLAILARLATGGAPWFTLARAISN*
Ga0137776_14621061	3300010937	Sediment	MPRRRNAERPGARLARSYLVMRADQWSDRQPHDAPPRLKGTVRLPRLSSVQLNSPEAHAQYRLGILARLATGGARWFLLAQA*
Ga0137391_101595141	3300011270	Vadose Zone Soil	MSRRRNAERPGARLARSYLVMRAEQAVDRQPHDSSPKLRGTVRLPRLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAGSA*
Ga0137391_108370642	3300011270	Vadose Zone Soil	MSRRRNAERPGGRLARSYLVMRAEQTADRQPKDAAPKLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTLADSV*
Ga0137391_108975222	3300011270	Vadose Zone Soil	MPRRRNAERPGARLARSYLVMRAEQGADRQPDDQATRLRGSVRLPRLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLALGSF*
Ga0120156_10826522	3300011996	Permafrost	MPMPRRRNAERPGARLARSYLVMRAEQAADRQPHDPAPRLRGTVRLPKLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAFGG*
Ga0120159_11996022	3300012014	Permafrost	MPRRRNAERPGARLARSYLVMRAEQAADRQPHDPAPRLRGTVRLPKLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAFGG*
Ga0137389_118290762	3300012096	Vadose Zone Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPHDAPKLSGTVRLPRLIAVQLNSPEAHAQYRLAILARLATGGAPWFTLAGNA*
Ga0137388_110282471	3300012189	Vadose Zone Soil	PGGRLARSYLVMRAEQTADRQPKDAAPKLRGTVRLPRLVAIQLNSPEAHAQYRLAILARLATGGAPWFTLADSV*
Ga0137381_108805061	3300012207	Vadose Zone Soil	RSYLVMRAEQWADRQPHDQQPRLRGTVRLPRLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAANSHSPTANGASGSEP*
Ga0137376_118003431	3300012208	Vadose Zone Soil	ARLARSYLVMRAEQGADRQPAEAHTRLRGTVRLPRLATIQLNSPEAHAQYRLAILARLATGGAPWFTLALSS*
Ga0137379_102905411	3300012209	Vadose Zone Soil	MPRRRNAERPGARLARSYLVMRAEQWADRQPHDQQPRLRGTVRLPRLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAANSHSP
Ga0137378_100200492	3300012210	Vadose Zone Soil	MPRRRNAERPGARLARSYLVMRAEQWADRQPHDQQPRLRGTVRLPRLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAANSHSPTANS*
Ga0137377_107292822	3300012211	Vadose Zone Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPHDPAPRLRGTVRLPKLVAVQLNSPEAHAQYRLAILARLATGGAPWFTLAFDA*
Ga0150985_1017206472	3300012212	Avena Fatua Rhizosphere	ERPGARLARSYLVMRAEQGADRQPAEAQTKLRGTVRLPRLASIQLNSPEAHAQYRLAILARLATGGAPWFTLALSS*
Ga0150985_1050881532	3300012212	Avena Fatua Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQSADRQPSDALPKLRGAVRLPRLESVQLNSPEAHAQYRLAILARLATGGAHWFTLAQ*
Ga0150985_1076899182	3300012212	Avena Fatua Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQTADRQPNDAQPRLRGTVRLPRLISVQLNSPEAHAQYRLAILARLATGGAQWFTLAQ*
Ga0150985_1115295001	3300012212	Avena Fatua Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQTADRQPNDALPRLRGTVRLPRLISVQLNSPEAHAQYRLAILARLATGGAQWFTLAQ*
Ga0150985_1117359532	3300012212	Avena Fatua Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQGADRQPAEAQTRLRGTVRLPRLATLQLNSPEAHAQYRLAILARLATGGAPWFTLALSN*
Ga0150985_1210590671	3300012212	Avena Fatua Rhizosphere	LLRSYLVMRAEQTVDRQPSDALPKLRGTVRLPRLVAVQLNSPEAHAQYRLAILARLATGGAKWFTLAT*
Ga0137370_104521932	3300012285	Vadose Zone Soil	MPRRRKAERPGARLARSYLVMRAEQTADRQPKEQTQKLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTLADSA*
Ga0137384_106691761	3300012357	Vadose Zone Soil	MPRRRNAERPGARLARSYLVMRAEQWADRQPHDPQPRLRGTVRLPRLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAANSHSPTANS*
Ga0150984_1120716381	3300012469	Avena Fatua Rhizosphere	NAMPRRRRADRPGARLARSYLVMRAEQGADRQPTEVGPKLRGTVRLPRLASVQLNSPEAHAQYRLAILARLATGGAPWFTLARTS*
Ga0137373_108897022	3300012532	Vadose Zone Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPHEAAPKLRGTVRLPRLVAVQLNSPEAHAQYRLAILARLATGGAQWFTLAGTS*
Ga0120109_11157502	3300014052	Permafrost	MPRRRNAERPGARLARSYLVMRAEQAADRQPHDPAPRLRGTVRLPKLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLACT*
Ga0120149_10764072	3300014058	Permafrost	MPRRRNAERPGARLARSYLVMRAEQTADRQPKDAAPKLRGTVRLPRLVLIQLNSPEAHAQYRLAILARLATGGAPWFT
Ga0157376_128407951	3300014969	Miscanthus Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQSTERQPREVGRRLAGTVRMPHLESVQLNSPEAHAQYRLAVLARLATGGAPWFTLAPHTA*
Ga0132258_125657162	3300015371	Arabidopsis Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQWADRQPDDASPRLGGTVRLPRLMAVQLNSPEAHAQYRLGILARLATGGARWFTLARNK*
Ga0132256_1025113462	3300015372	Arabidopsis Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQGADRQPAEAPTRLRGTVRLPRLATIQLNSPEYLARYRLAILARLATGGAPWFTLA
Ga0132255_1047688351	3300015374	Arabidopsis Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQGAELQPNEAAAKLHGTVRMPRLATIQLNSPEAHAQYRLAVLAR
Ga0182033_113638762	3300016319	Soil	MPRRRNAERPGARLARSYLMMRAEQWADRQPAGQSPRLRGTVRLPRLTAVQLNSPEAQAQYRLGILARLATGGAKWFTLSRA
Ga0066667_101890253	3300018433	Grasslands Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPSDSAPRLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTLARSR
Ga0066662_104753592	3300018468	Grasslands Soil	MAGRRNAERPGARLARSYLGVRAEQSADRQPKDLTARLQGTVRLPQLDATQLTSPEAHAQYRLAVLARLATGGAAWFTLASQVN
Ga0066662_107451322	3300018468	Grasslands Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPVDSAPRLRGTVRLPRLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAGRG
Ga0066662_123507862	3300018468	Grasslands Soil	MPRRRKAERPGGRLARSYLIMRAEQTADRQPKEAAPKLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATG
Ga0066669_101502652	3300018482	Grasslands Soil	MPRRRNAERPGARLARSYLVMRAEQWADRHPRDPSAKLRGTVRLPRLVAVQLNSPEAHAQYRLGILARLATSGARWFTLATA
Ga0066669_109184422	3300018482	Grasslands Soil	MPRRRKAERPGGRLARSYLIMRAEQTADRQPKEAAPKLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTLADSA
Ga0206356_109530152	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	RNAERPGARLARSYLVMRAEQAADRQPHDAGPRLRGTVRLPRLVSVQLNSPEAHAQYRLAVLARLATGGAPWFTLAGSA
Ga0213873_103214781	3300021358	Rhizosphere	MPRRRNAERPGARLARSYLVMRADQAADRQPHDVTPRLRGTVRLPQLEAVQLSSPEAHAQYRLGILARLATGGAPWFALAVSSH
Ga0213882_100237472	3300021362	Exposed Rock	MPRRRNAERPGARLARSYLVMRAEQWADRQPDPTPKLRGTVRLPRLMAVQLNSPEAHAQYRLGILARLATGGAKWFTLARA
Ga0213882_102226521	3300021362	Exposed Rock	MPRRRNAERPGARLARSYLVMRAEQTADRQPHELGARLRGTVRLPQLWSVQLSSPEAHAQYRLGILARLATGGARWFSLAV
Ga0213882_103555872	3300021362	Exposed Rock	MPRRRNAERPGARLARSYLVMRAEQWADRQPVPTPRLSGTVRLPRLVAVQLNSPEAHAQYRLGILARVAMGGAKWFTLAKA
Ga0213876_100897261	3300021384	Plant Roots	MPRRRNAERPGARLARSYLVMRAEQTADRQPHELGARLRGTVRLPQLWSVQLSSPEAHAQYRLGILARLATGGARWFSLAVSRPA
Ga0213875_100797012	3300021388	Plant Roots	MPRRRNAERPGARLARSYLVMRAEQWADRQPDPTPKLRGTVRLPRLMAVQLNSPEAHAQYRLGILARLATGGAKWFTLART
Ga0213875_100871762	3300021388	Plant Roots	MPRRGNAERPGARLAHSYLVMRAEQWTDRQPHDQSLRLRGTVRLPRLVSVQLNSPEAHTQYRLAILARLATGGAPWFTLASR
Ga0213875_101876522	3300021388	Plant Roots	MPRRRNAERPGARLARSYLVMRAEQWADRQPADTAPRLDGTVRLPRLTSVQLNSPEAHAQYRLGILARLATGGARWFTLART
Ga0213875_104888732	3300021388	Plant Roots	MPRRRNAERPGARLARSYLVMRAEQWADRQPTDAPPRLRGTVRLPRMTAVQLNSPEAHAQYRLGILARLATGGARWFTLAAQSASR
Ga0213875_106071211	3300021388	Plant Roots	MPRRRNAERPGARLARSYLVMRAEQWADRQPRDPSSRVRGTVRLPRLAAVQLNSPEAHAQYRLGILARLATGGARWFTLAAAPL
Ga0210384_117953672	3300021432	Soil	AERPGARLARSYLVMRAEQAADRQPHDPAPRLRGTVRLPKLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAFGA
Ga0126371_135554091	3300021560	Tropical Forest Soil	MPRRRRADRPGARLARSYLLMRAEQCADRQPSEIGLKLRGTVRLPRLAAVQLNSPEAHAQYRLAILARLA
Ga0213853_109674521	3300021861	Watersheds	MPRRRNAERPGARLARSYLVMRAEQAADRQPHESAPRLRGTVRLPKLVAVQLNSPEAHAQYRLAILARLATGGAPWFTLAFGAI
Ga0213853_115466051	3300021861	Watersheds	MPRRRNAERPGARLARSYLVMRAEQAADRQPHDPAPRLRGTVRLPKLISVQLNSPEAHAQYRLAILARLATGGAPWFTLALGA
Ga0213880_101588211	3300021953	Exposed Rock	MPRRRNAERPGARLARSYLVMRADQAADRQPHDVTPRLRGTVRLPRLEAVQLSSPEAHAQYRLGILARLATGGAPWFALAVSGR
Ga0207684_105299742	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MARRRNAERPGGRLARSYLVMRAEQTADRQPKDGAPKLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTLADSA
Ga0207684_107649382	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQAADRQPDDQAARLRGTVRLPRLVAVQLNSPEAHAQYRLAILARLATGGAPWFTLAMGR
Ga0207684_113692922	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPRRRNAERPGGRLARSYLVMRAEQTADRQPKDGAPKLRGTVRLPRLISIQLNSPEAHAQYRLAILARLATGGAPWFTLADSK
Ga0207665_102290351	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	PGARLARSYLVMRAEQAADRQPHDPAPRLRGTVRLPKLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAFGA
Ga0207679_108877772	3300025945	Corn Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQGADRQPSESGPKLRGTVRMPRLAAVQLNSPEAHAQYRLAILARLATGGAPWFTLALAK
Ga0207651_111354762	3300025960	Switchgrass Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQGADRQPAEAHTRLRGTVRLPRLATLQLNSPEAHAQYRLAILARLATGGAPWFTLALSS
Ga0207676_108935782	3300026095	Switchgrass Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQGADRQPSESGPKLRGTVRMPRLAAVQLNSPEAHAQYRLAILARLATGGAPW
Ga0207675_1011782132	3300026118	Switchgrass Rhizosphere	MPRRRNAERPGARLARSYLVMRAEQGADRQPSESGPKLRGTVRMPRLAAVQLNSPEAHAQYRLAILARLA
Ga0209154_12044501	3300026317	Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPVDSAPRLRGTVRLPRLVSVQLNSPEAHAQYRLAILARL
Ga0209152_104021941	3300026325	Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPSDSAPRLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAP
Ga0209474_107566091	3300026550	Soil	MPRRRKAERPGARLARSYLVMRAEQGADRQPHDSSPRVHGCVRLPRLASVQLNSPEAHAQYRLGILARLATGGAKWF
Ga0179593_113780611	3300026555	Vadose Zone Soil	MQNDLAARLARSYLVMRAEQAADRQPHDPAPRLRGTVRLPKLVSVQLNSPEAHAQYRLAILARLATGGAPWFHASLRRLAA
Ga0209166_100094675	3300027857	Surface Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPHDPAPRLRGTVRLPKLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAPGA
Ga0209166_101354591	3300027857	Surface Soil	MPRRRNAERPGARLARSYLVMRAEQTADRQPKESAPKLRGTVRLPRLVSVQLNSPEAHAQYRLAILARLATG
Ga0209166_103586172	3300027857	Surface Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPHDPAPRLRGTVRLPKLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAFGS
Ga0209701_104635881	3300027862	Vadose Zone Soil	PGGRLARSYLVMRAEQTADRQPKDAAPKLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTLADSV
Ga0209283_103146572	3300027875	Vadose Zone Soil	MPRRRNAERPGGRLARSYLVMRAEQTADRQPKDGAPKLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTLADSV
Ga0137415_108601852	3300028536	Vadose Zone Soil	MPRRRNAERPGGRLARSYLVMRAEQTADRQPKDAAPKLRGTVRLPRLVSIQLNSPEAHAQYRLAILARLATGGAPWFTLADSV
Ga0307283_101284632	3300028790	Soil	MPRRRNAERPGARLARSYLVMRAEQAADRQPEESAPRLSGTVKMPRLVSVQLNSPEAHAQYRLAILARLATGGAPWFTLAGSR
Ga0170824_1170469401	3300031231	Forest Soil	MPRRRNAERPGARLARSYLVMRAEQWADRQPSDLSSKLPGTVRLPRLTSVQLNSPEAHAQYRLGILARLATGGAKWFTLAR
Ga0308194_102130181	3300031421	Soil	PRRRRNAERPGARLARSYLVMRAEQAADRQPHDPAPRLRGPVRLPKLVAVQLNSPEAHAQYRLAILARLATGGAPWFTLAFGA
Ga0272428_100061315	3300031520	Rock	MPRRRKRERPGARLARSYLAMRADQSTERQPEGKPPSLGGTVRLPRLDAVQLNSPEAHAQYRLAVLARLATGGSQWFVLASGQ
Ga0318562_104712271	3300032008	Soil	MPRRRNAERPGARLARSYLVMRAEQWADRQPNDPSPKLRGTVRLPRLTAVQLNSPEAHAQYRLGILARLATGGAKWFTLAHRKS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056797

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences