Metagenome / Metatranscriptome Family F056806

Basic Information
Family ID	F056806
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	98 residues
Representative Sequence	MTSKQLAAACHASDPAQHATCIGYVAGIYDLQFAPTPPRGVCPPENFTPDLLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCTEQHR
Number of Associated Samples	108
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	0.00 %
% of genes from short scaffolds (< 2000 bps)	0.00 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.80

Most Common Taxonomy
Group	Unclassified (100.000 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (12.409 % of family members)
Environment Ontology (ENVO)	Unclassified (26.277 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (47.445 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.96% β-sheet: 3.48% Coil/Unstructured: 49.57%
Feature Viewer

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SCOP family	SCOP domain	Representative PDB	TM-score
a.57.1.1: Protein HNS-dependent expression A; HdeA	d1bg8a_	1bg8	0.56788
a.104.1.0: automated matches	d6ycma_	6ycm	0.56705
c.41.1.1: Subtilases	d1gcia_	1gci	0.56277
c.41.1.1: Subtilases	d1wmda2	1wmd	0.5556
c.41.1.0: automated matches	d6f9ma_	6f9m	0.55466

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF13507	GATase_5	59.12
PF02700	PurS	18.98
PF01259	SAICAR_synt	7.30
PF02769	AIRS_C	1.46
PF05685	Uma2	1.46
PF02771	Acyl-CoA_dh_N	0.73
PF00043	GST_C	0.73
PF07690	MFS_1	0.73
PF00005	ABC_tran	0.73
PF05742	TANGO2	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG1828	Phosphoribosylformylglycinamidine (FGAM) synthase, PurS subunit	Nucleotide transport and metabolism [F]	18.98
COG0152	Phosphoribosylaminoimidazole-succinocarboxamide synthase	Nucleotide transport and metabolism [F]	7.30
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	1.46
COG0435	Glutathionyl-hydroquinone reductase	Energy production and conversion [C]	0.73
COG0625	Glutathione S-transferase	Posttranslational modification, protein turnover, chaperones [O]	0.73
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.73
COG3332	Uncharacterized stress-responsive protein, TANGO2 (Transport and Golgi organisation 2) family, contains NRDE motif	General function prediction only [R]	0.73

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	100.00 %

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.53%
Host-Associated	Host-Associated	28.47%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.69%
Plants	Host-Associated → Plants	27.74%
Aquatic	Environmental → Aquatic	5.84%
Fungi	Host-Associated → Fungi	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.50%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.41%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.41%
Freshwater	Environmental → Aquatic → Freshwater	5.84%
Roots	Host-Associated → Plants → Roots	2.92%
Peat	Environmental → Terrestrial → Peat	1.46%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.73%
Mycelium	Host-Associated → Fungi → Mycelium	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.91%
Loam	Environmental → Terrestrial → Soil → Loam	8.76%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.76%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.38%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.65%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.46%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.73%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	24.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.76%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.11%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.38%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.19%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.19%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.73%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.73%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.73%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.73%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.73%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	12.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.68%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	6.57%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.38%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.38%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.38%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.65%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.65%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.19%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.19%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.19%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.46%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.46%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.46%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.46%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.46%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.73%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.73%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.73%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.73%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.73%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.73%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.73%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.73%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.73%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.73%
Attine Ant Fungus Gardens	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Attine Ant Fungus Gardens	0.73%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005531	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300011404	Attine ant fungus gardens microbial communities from New Jersey, USA - TSNJ035 MetaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022467	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300030399	II_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030624	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO132-ANR005SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_100236105	3300001356	Peatlands Soil	MTARQLAAACHATDAAQHAACVGYVSGIYDLQFAPTPPRGVCPPENFTPDLLAEVVTAYLDTHEDGPAPTAIGQAVVRFFPCGEARK*
JGI12269J14319_101561222	3300001356	Peatlands Soil	ARQLAAACHATDAAQRAACVGYVSGIYDLQFAPTPPRGVCPPENFSPELLAEVVTAYLDTHEDGPAPTAIGQAIVRFFPCGETRK*
JGI12269J14319_103321051	3300001356	Peatlands Soil	TDAAQHAACVGYVSGIYDLQFAPTPPRGVCPPENFTPDLLAEVVTAYLDTHEDGPAPTAIGQAIVRFFPCSEARR*
JGIcombinedJ26739_1014825891	3300002245	Forest Soil	IIAATAALILATAPTRAQPAPGWKPMTARQLATACHSADAAQHATCVGYISGIYDLQFAPTPPRGVCPPQDLTPDLLTEVVVAYLDTHEDGPAPAAIGQAIVRFFPCSEQHK*
JGI26341J46601_101722612	3300003219	Bog Forest Soil	MTLVASVAHAQQAPGWKQMTSKQLAAACHATDPAQHAGCVGYVFGVYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCAEQKR*
Ga0062387_1004558042	3300004091	Bog Forest Soil	SAKVLATLCHATDVTKHAQCLGYVSGIYDLQFAPKLPAGVCPPPNLDAELLAEVVTAYLDTHEDGPAAEAIGQSVVRFFPCGAAAPKKP*
Ga0062386_1009544711	3300004152	Bog Forest Soil	RGPSYWPPAFAGVTLLLAGLAHAQPAQPAWKQMTSKQLAAACHAADPAQHAGCVGYVYGVYDLQFAPTPQRGVCTPENLTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCTEQKR*
Ga0062386_1010885322	3300004152	Bog Forest Soil	MRSRLLLFAACTAPVMAVAQPAAPGWKQTTAKQLAAECHSTDAAQHAACVGYVSGIYDLQFAPTPPRGVCPPADFTPDLLAELVTAYADTHEDGPAPAAIGQAIVRFFPCSEQRK*
Ga0062388_1014356831	3300004635	Bog Forest Soil	TDATKHAQCLGYVSGIYDLQFAPKLPAGVCTPANLDEELLAEVVTAYLDTHEDGPAAEAIGQSVVRFFPCGPGAPKKP*
Ga0070700_1010722372	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTSKQLATACHAPDPAQRAACVGYVSGVYDLQFAPTPPRGVCPPADFTPDLLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCPEPRR*
Ga0070679_1015495972	3300005530	Corn Rhizosphere	ALLLGAAHAQPAQQPAAPGWKPMTAKQLAAACHSADAAQHANCVGYVSGIYDLQFAPTPPRGVCPPADFTPDLLTAVVLAYVDTHEDGPAPAAIGQAIVRFFPCSEPRK*
Ga0070738_103011113	3300005531	Surface Soil	MTSKQLATACHANDPTQHGTCLGYVAGIYDLQFAPTPPRGVCPPSDFTPELLAQVVTAYADTHEDGPAPAAIG
Ga0070684_1006270461	3300005535	Corn Rhizosphere	PAQQGWKQMTSRQLATACHSAEPAQHGLCLGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCTEQHR*
Ga0068855_1019612232	3300005563	Corn Rhizosphere	AQHGLCLGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCTEQHR*
Ga0068857_1018693881	3300005577	Corn Rhizosphere	MVSRRFGVGVGGAVVISLLCLGSSADGQPAPAWKLMTSKQLATACHASDAAQHAVCVGYVSGVYDLQFAPTPPRGVCPPADFTPELLAQVFTAYADTHEDGPATAAIGQAIVRFFPCAEQKR*
Ga0068856_1017032801	3300005614	Corn Rhizosphere	FAGMTAIVFASGAHSQPAQQGWKQMTSRQLATACHSAEPAQHGLCLGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCTEQHR*
Ga0068856_1022616752	3300005614	Corn Rhizosphere	MPRDPSPPRRRGPGLWIPAFVGITALVVTAGAHSQVTQQGWKQMTSRQLATACHSAEPGQHGLCLGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCTEQHR*
Ga0068852_1016091522	3300005616	Corn Rhizosphere	WIPAFAGMTAMVFASGAHSQPAQQGWKQMTSRQLATACHSAEPAQHGLCLGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCTEQHR*
Ga0068864_1010080431	3300005618	Switchgrass Rhizosphere	CHSTEPAQHGLCLGYVSGIYDLQFAPTPPRGVCPPPDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCTEQHR*
Ga0066903_1042518491	3300005764	Tropical Forest Soil	GWKLMTAKQLATACHSPDAAQHATCTGYVSGIYDLQFAPTPPRGVCPPPDFSPELLTEVVTAYLDTHEDGPAPAAIGQAIVRFFPCAEPHK*
Ga0081455_102310512	3300005937	Tabebuia Heterophylla Rhizosphere	LTSKQLAAACHSPDPAQHATCVGYVTGVYDLQFAQTAQRGVCPPPDFTPDLLAQVVTAYADTHEDSPATAAIGQAIVRFFPCPEQRR*
Ga0070717_117756422	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VNRHPRSQGRSLWIPAFAGMTAMVFATGAYSQGTQQAWKQMTSRQLATACHSAEPAQHGLCLGYVAGIYDLQFAPTPPRGVCPPADFTPDLLAQVVMAYADTHEDGPAPAAIGQAI
Ga0070712_1001534023	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SASTWKTMTARQLAAACHASDAAQHASCVGYVSGIYDLQFAPTPPRGVCPPENFTPDLLAEVVTAYLDTHDDGPAPAAIGQAIVRFFPCNEQRR*
Ga0070765_1013316822	3300006176	Soil	ASTWKTMTARQLAAACHASDAAQHASCVGYVSGIYDLQFAPTPPRGVCPPENFTPDLLAEVVTAYLDTHEDGPAAEAIGQSVVRFFPCGAATPTKKP*
Ga0097621_1010451842	3300006237	Miscanthus Rhizosphere	MTVVPGLGHAQPATNPNWKQMTSKQLAAACHASDAAQHATCIGYVAGIYDLQFAPTPPRGVCPPENFTPDLLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCTEQHR*
Ga0068871_1023806201	3300006358	Miscanthus Rhizosphere	MTVVPGLGHAQPATNPNWKQMTSKQLAAACHASDPAQHATCIGYVAGIYDLQFAPTPPRGVCPPENFTPDLLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCTEQHR*
Ga0074059_113545982	3300006578	Soil	HAQPVTGWKPMTSKQLAIACHASDPAQRAGCVGYVAGIYDLQFAPTPPRGVCPPTDFTPDLLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCPEQKR*
Ga0079220_102941422	3300006806	Agricultural Soil	EPAQHGLCLGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCTEQHR*
Ga0068865_1005024451	3300006881	Miscanthus Rhizosphere	MTSKQLAAACHASDAAQHATCIGYVAGIYDLQFAPTPPRGVCPPENFTPDLLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCTEQHR*
Ga0111539_114782101	3300009094	Populus Rhizosphere	GWKQMTSRQLATACHSAEPAQRGLCLGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCAEQRR*
Ga0105247_103360221	3300009101	Switchgrass Rhizosphere	LLIAPADAQPAQQGWKQMTSRQLATACHSTEPAQHGLCLGYVSGIYDLQFAPTPPRGVCPPPDFTPDLLPQVVTAYADTHEDDPAPAAVGQAIVRFFPCTEQHR*
Ga0105241_112974842	3300009174	Corn Rhizosphere	VVPSLGHAQPATNPNWKQMTSKQLAAACHASDAAQHATCIGYVAGIYDLQFAPTPPRGVCPPENFTPDLLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCPEPRR*
Ga0116219_105477911	3300009824	Peatlands Soil	QPAPGWKPMTARQLAAACHATDAAQHAACVGYVSGIYDLQFAPTPPRGVCPPENFTPDLLAEVVTAYLDTHEDGPASTAIGQAVVRFFPCGEARK*
Ga0074046_105612291	3300010339	Bog Forest Soil	LSVKTLAGLCHATDATKHAQCLGYVSGIYDLQFAPRLPAGVCPPPNLDAELLAEVVTAYLDTHEDGPAAEAIGQSVVRFFPCGPATPKKP*
Ga0074045_103902821	3300010341	Bog Forest Soil	ALAALCHATDATKHAQCLGYVSGIYDLQFAPRLPAGVCPPPNLDAELLAEVVTAYLDTHEDGPAAEAIGQSVVRFFPCGPATPKKP*
Ga0126378_101673614	3300010361	Tropical Forest Soil	MTSRQLAAACHATDPAQHAGCVGYVYGVYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCAEQKR*
Ga0126378_109199833	3300010361	Tropical Forest Soil	MTSRQLAAACHAADPAQHATCIGYVTGIYDLQFAPTPPRGVCPPENFSPDLLAQVVTAYADTHDDGPAPAAIGQAIVRFF
Ga0105239_121193762	3300010375	Corn Rhizosphere	MTSKQLATACHASDAAQHAVCVGYVSGVYDLQFAPTPPRGVCPPADFTPELLAQVFTAYADTHEDGPATAAIGQAIVRFFPCAEQKR*
Ga0126381_1020391502	3300010376	Tropical Forest Soil	VLLAAAALTLAFSAHAQTAPGWKLMTAKQLASACHSSDAAQHATCVGYVSGIYDLQFAPTPPRGVCPPSDFSPELLTEVVTAYLDTHEDGPAPAAIGQAIVRFFPCAEPHK*
Ga0126381_1030868483	3300010376	Tropical Forest Soil	MTSRQLAAACHATDPAQHAGCVGYVYGVYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAA
Ga0126381_1036733682	3300010376	Tropical Forest Soil	MIAGVAQAQPAPGWKPTTAKQLAAACHANDPAQHAACVGYVSGVYDLQFAPTPPRGVCPPSDLTPDLLAQVVTAYADTHEDGPATAAIGQAIVRFFPCSEPRR*
Ga0136449_1006892373	3300010379	Peatlands Soil	MTVGAALTAHAQPAPGWKPMTARQLAAACHATDAAQHAACVGYVSGIYDLQFAPTPPRGVCPPENFTPDLLAEVVTAYLDTHEDGPAPTAIGQAVVRFFPCGEARK*
Ga0136449_1009184762	3300010379	Peatlands Soil	MTMEFPGMATLLIGLCLPVALHAQSAPGWKLMTAKQLATACHSPDAAQHATCVGYVSGIYDLQFAPTPPRGVCPPQDLTPDLLTEVVTAYLDTHEDGPAPAAIGQAIVRFFPCSEPHK*
Ga0136449_1018486793	3300010379	Peatlands Soil	MHSRLLLFVACTAPAMAVAQPAAPGWKQTTAKQLAAQCHSTDAAQHAACVGYVSGIYDLQFAPTPPRGVCPPADFTADMLAEVVTAYADTHEDGPAPTAIGQAIVRFFPCSEPRR*
Ga0134122_118221671	3300010400	Terrestrial Soil	HCVLTVLLASAAQAQPAAGWKQMTSKQLATACHASDPAQRAVCVGYVAGIYDLQFAPTPPRGVCPPTDFTPDLLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCPEQKR*
Ga0126359_17302662	3300010869	Boreal Forest Soil	LSAKDLAVKCHASEPGPHAACIAYVQAIFDLQFAPAPPRGICTPPDLTPELLAEVVTAYVDTHEDGPAPAAVGQAIVRFFPCTEQHR*
Ga0153951_10971062	3300011404	Attine Ant Fungus Gardens	QLAADCHASDAGQHARCVGYVQGIYDLQFAPNPPHGVCPPTDFTPDQLAEVVTAYADTHEDGPAPPAVGQAIVRFFPCTEQHK*
Ga0150985_10021144210	3300012212	Avena Fatua Rhizosphere	MTAMVVSAGAHSQATQQGWKQMTSRQLATACHSAEPAQRGLCLGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCAEQRR*
Ga0150985_1174713842	3300012212	Avena Fatua Rhizosphere	SDPAQRASCVGYVTGIYDLQFAPTPPRGVCPPAEFTPDLLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCPEPRR*
Ga0150985_1209910423	3300012212	Avena Fatua Rhizosphere	LLIAPADAQPAQQGWKQMTSRQLATACHSTEPAQHGLCLGYVSGIYDLQFAPTPPRGVCPPPDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCTEQHR*
Ga0150984_1181270084	3300012469	Avena Fatua Rhizosphere	MTAMVVSVGAHSQATQQGWKQMTSRQLATACHSAEPAQRGLCLGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCAEQRR*
Ga0153915_118162232	3300012931	Freshwater Wetlands	CHATDAAQHAVCVGYVSGIYDLQFAPTPPRGVCPPGNFTPDLLAEVVTAYVDTHEDGPAPTAIGQAIVRFFPCGEARR*
Ga0164308_118690171	3300012985	Soil	VVPSLGHAQPATNPNWKQMTSKQLAAACHASDAAQHATCIGYVAGIYDLQFAPTPPRGVCPPENFTPDLLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCTEQHR*
Ga0157374_102207772	3300013296	Miscanthus Rhizosphere	MTSRQLATACHSTEPAQHGLCLGYVSGIYDLQFAPTPPRGVCPPPDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCTEQHR*
Ga0157374_127728831	3300013296	Miscanthus Rhizosphere	MTSKQLATACHAPDPAQRAACVGYVSGVYDLQFAPTPPRGVCPPADFTPDLLAQVVTAYADTHEDGPAPAAIGQ
Ga0163162_104165002	3300013306	Switchgrass Rhizosphere	VVPSLGHAQPAANPNWKQMTSKQLAAACHASDAAQHATCIGYVAGIYDLQFAPTPPRGVCPPENFTPDLLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCTEQHR*
Ga0163163_108430992	3300014325	Switchgrass Rhizosphere	MTSKQLAAACHASDPAQHATCIGYVAGIYDLQFAPTPPRGVCPPENFTPDLLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCTEQHR*
Ga0182016_101502903	3300014493	Bog	MCHATGDATKRAQCLGYVSGIYDLQFTPRIPAGVCPPASLNPELLAEVVTAYLDSHEDGPAAEAIGQAVVRFFPCGAAGTKKP*
Ga0182008_100194693	3300014497	Rhizosphere	LLAISAHAQPAQQGWKQMTSRQLATACHSAEPGQHGLCLGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCTEQHR*
Ga0157377_103780321	3300014745	Miscanthus Rhizosphere	TAMVVSAGAHSQATQQGWKQMTSRQLATACHSAEPAQRGLCLGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCAEQRR*
Ga0157377_110439332	3300014745	Miscanthus Rhizosphere	ATACHSTEPAQHGLCLGYVSGIYDLQFAPTPPRGVCPPPDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCTEQHR*
Ga0157379_124471852	3300014968	Switchgrass Rhizosphere	GGGGAVVISLLCLGSSADGQPAPAWKLMTSKQLATACHASDAAQHAVCVGYVSGVYDLQFAPTPPRGVCPPADFTPELLAQVFTAYADTHEDGPATAAIGQAIVRFFPCAEQKR*
Ga0157376_108931912	3300014969	Miscanthus Rhizosphere	ACHASDPAQRAACVGYVSGVYDLQFAPTPPRGVCPPADFTPDLLAQVVTAYADTHEDGPAATAIGQAIVRFFPCPEPRR*
Ga0157376_123314632	3300014969	Miscanthus Rhizosphere	MTAMVLASVAHSQPAQQGWKQMTSRQLATACHSAEPAQRGLCLGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCAEQRR*
Ga0132258_123350651	3300015371	Arabidopsis Rhizosphere	LASAAHAQPVSGWKQMTSKQLATACHASDAAQHAACVGYVSGIYDLQFAPAPPRGVCPPADFTPELLAQVVTAYADTHEDGPATAAIGQAIVRFFPCTEQKR*
Ga0132258_129293332	3300015371	Arabidopsis Rhizosphere	MSARQLAAACHAGDPAQHANCVGYVSGIYDLQFAPTPPRGVCPPADFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCPEQKR*
Ga0132256_1036181902	3300015372	Arabidopsis Rhizosphere	GRGLLFLAALALLLIARAYAQPAQGWKQMTSRQLATACHSAEPAQHGLCLGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCPEQRR*
Ga0132257_1031427991	3300015373	Arabidopsis Rhizosphere	PGWHIMSARQLAAACHAGDPAQHANCVGYVSGIYDLQFAPTPPRGVCPPADFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCPEQKR*
Ga0182041_121925202	3300016294	Soil	MVKRGQGPPPPRKGRGRTAIVGVLAVSVAGLLQAHAQPAPGWKQMTSKQLAAACHASDPAQHAGCVGYVYGIYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHED
Ga0182033_117363131	3300016319	Soil	MGRTTRGSVVALVLALAGSAANAQPAQSWKQMTAKQLAAACHASDPGPRGTCLGYVAGIYDLQFAPTPPRGVCPPADFTPELLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCAEQHR
Ga0182035_117312882	3300016341	Soil	VLAALAVSVVGLSQAHTQPAPGWKQMTSRQLAAACHATDPAQHAGCVGYVYGVYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRF
Ga0182040_116813272	3300016387	Soil	MHPEPPRSRKRVPCGSRLAFVAMTALATAAAAQTQSLGWKPLTAKQLAAQCHASEPAPRATCVGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAEVVTAYVDTHDDGPASAAVGQAVVRFFPCVEPH
Ga0190274_105125563	3300018476	Soil	IAAAVVLVLTTAGVTAHAQPQPPPEPTWKQMTSRQLAAACHATDAAQRALCVGYVRGVYDLQFAPTPPRGVCPPADFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCTEQRR
Ga0206350_100454761	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	WIPAFAGMTAMVFASGAHSQPAQQGWKQMTSRQLATACHSAEPAQHGLCLGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCTEQHR
Ga0210395_109992071	3300020582	Soil	PASAQPAPGWKPLSAKDLAVKCHASEPGPHAACIAYVQGIFDLQFAPAPPRGICTPPDLTPELLAEVVTAYVDTHEDGPAPAAVGQAIVRFFPCTEQHR
Ga0210401_101530973	3300020583	Soil	MTVKQLAADCHASDAGQHARCVGYVQGIYDLQFAPNPPHGVCPPADFTPDQLAEVVTAYADTHEDGPAPPAVGQAIVRFFPCTEQHK
Ga0210401_110580632	3300020583	Soil	DLATTCHATGDPVKHAQCLGYISGIYDLQFAPKMPAGVCPPANLSAELLSEVVTAYLDTHEDGPAAPAIGESVVRFFPCAPGAAKKP
Ga0210406_104159642	3300021168	Soil	MTARQLAAACHASDAAQHASCVGYVSGIYDLQFAPTPPRGVCPPENFTPDLLAEVVTAYLDTHDDGPAPAAIGQAIVRFFPCNEQRR
Ga0210408_107552421	3300021178	Soil	ATAAAQAESASGWKLMTAKQLATACHSPDAAQHATCVGYVSGIYDLQFAPTPPRGVCPPQDLTPDLLTEVVTAYLDTHEDGPAPAAIGQAIVRFFPCSEQHK
Ga0213881_105742902	3300021374	Exposed Rock	TAALAGANAWAQPAQQGWKELTSKQLAAACHASEPAQHGLCIGYVSGIYDLQFAPTPPRGICPPPDFTPELLAQVVTAYSDTHEDGAAPAAIGQAIVRFFPCTEQHR
Ga0213875_100281104	3300021388	Plant Roots	MARFLPLLVAALTAILAMPAQAQPAAPGWKQMTAKELAADCHSSDAAHRATCVGYVSGIYDLQFAPTPPRGVCPPADFNPDQLAEVVTAYLDTHEDGPAPAAVGQVIVRFFPCTDQHR
Ga0210393_107655802	3300021401	Soil	AQPASAQPASTWKTMTARQLAAACHASDAAQHASCVGYVSGIYDLQFAPTPPRGVCPPENFTPDLLAEVVTAYLDTHDDGPAPAAIGQAIVRFFPCNEQRR
Ga0210392_104619562	3300021475	Soil	MTIPGAHAQPAQGWRLLTARELAARCHSTDAAQHASCVGYVQGIYDLQFATSPPRGVCPPSDFTPDLLAEVVTAYVDTHEDGPAPPAIGQAIVRFFPCSEGHK
Ga0210410_113950362	3300021479	Soil	QPASAQPASAQPASTWKTMTARQLAAACHASDAAQHASCVGYVSGIYDLQFAPTPPRGVCPPENFTPDLLAEVVTAYLDTHDDGPAPAAIGQAIVRFFPCNEQRR
Ga0126371_100897442	3300021560	Tropical Forest Soil	VSFVVLAVTFLAAAAHAQPAQPSWKQLTAKQLAADCHASDAAKHATCVGYITGIYDLQFAPTPPRGVCPPADLNPDLLAEVVIAYLDTHEDGPAPPAIGQAIVRFFPCAEGKR
Ga0126371_106344993	3300021560	Tropical Forest Soil	MTAKQLATACHSPDAAQHATCTGYVSGIYDLQFAPTPPRGVCPPPDFSPELLTEVVTAYLDTHEDGPAPAAIGQAIVRFFPCAEPHK
Ga0126371_130075832	3300021560	Tropical Forest Soil	MTAVATPTFAQPAQGWKQMTSRQLAAACHSAEPAQHGVCVGYVSGIYDLQFAPAPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCTEQHR
Ga0126371_138732811	3300021560	Tropical Forest Soil	MTSKQLATACHASDPAQHAGCVGYVYGVYDLQFAPTSPRGVCTPADFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCPEGKR
Ga0224712_105871642	3300022467	Corn, Switchgrass And Miscanthus Rhizosphere	QGPSLWIPAFAGMTAIVFASGAHSQPAQQGWKQMTSRQLATACHSAEPAQHGLCLGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCTEQHR
Ga0207693_101139631	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	STWKTMTARQLAAACHASDAAQHASCVGYVSGIYDLQFAPTPPRGVCPPENFTPDLLAEVVTAYLDTHDDGPAPAAIGQAIVRFFPCNEQRR
Ga0207693_113320412	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	KCHASEPGPHAACIAYTQAIFGLQFAPAPPRGICTPPDLTPELLAEVVTAYVDTHEDGPAPAAVGQAIVRFFPCTEQHR
Ga0207652_113283221	3300025921	Corn Rhizosphere	IAGIMLIGGMTALLLGAAHAQPAQQPAAPGWKPMTAKQLAAACHSADAAQHANCVGYVSGIYDLQFAPTPPRGVCPPADFTPDLLTAVVLAYVDTHEDGPAPAAIGQAIVRFFPCSEPRK
Ga0207681_104295332	3300025923	Switchgrass Rhizosphere	MTSKQLATACHAPDPAQRAACVGYVSGVYDLQFAPTPPRGVCPPADFTPDLLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCPEPRR
Ga0207691_115106362	3300025940	Miscanthus Rhizosphere	LATLLAITVVPSLGHAQPAANPNWKQMTSKQLAAACHASDPAQHATCIGYVAGIYDLQFAPTPPRGVCPPENFTPDLLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCTEQHR
Ga0207689_117769732	3300025942	Miscanthus Rhizosphere	MRHSTEPAQHGLCLGYVSGIYDLQFAPTPPRGVCPPPDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVR
Ga0207708_117553621	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	SWKQMTSKQLATACHAPDPAQRAACVGYVSGVYDLQFAPTPPRGVCPPADFTPDLLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCPEPRR
Ga0207702_101361263	3300026078	Corn Rhizosphere	MTSRQLATACHSAEPAQHGLCLGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCTEQHR
Ga0209040_100026775	3300027824	Bog Forest Soil	MTLVASVAHAQQAPGWKQMTSKQLAAACHATDPAQHAGCVGYVFGVYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCAEQKR
Ga0209040_101732801	3300027824	Bog Forest Soil	GPSYWPPAFAGVTLLLAGLAHAQPAQPAWKQMTSKQLAAACHAADPAQHAGCVGYVYGVYDLQFAPTPQRGVCTPENLTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCTEQKR
Ga0209415_102590562	3300027905	Peatlands Soil	MTARQLAAACHATDAAQRAACVGYVSGIYDLQFAPTPPRGVCPPENFSPELLAEVVTAYLDTHEDGPAPTAIGQAIVRFFPCGETRK
Ga0209062_12238601	3300027965	Surface Soil	MTSKQLATACHANDPTQHGTCLGYVAGIYDLQFAPTPPRGVCPPSDFTPELLAQVVTAYADTHEDGPAPAAIGQ
Ga0268266_107221853	3300028379	Switchgrass Rhizosphere	MTSKQLAAACHASDPAQHATCIGYVAGIYDLQFAPTPPRGVCPPENFTPDLLAQGVTAYADTHEDGPAPAAIGQAIV
Ga0307297_101235531	3300028754	Soil	AQAQTVTGWKQMTSRQLATACHASDPAQRAVCVGYVAGIYDLQFAPTPPRGVCPPADFTPDLLAQVVTAYADTHEDGPASAAIGQAIVRFFPCPEQKR
Ga0311353_108974482	3300030399	Palsa	KHAECLGYVSGIYDLQFAPKVPAGVCPPANLDPELLAEVVTAYLDTHEDGPAAEAIGQSVVRFFPCGSGAPGGPKKP
Ga0311372_105067773	3300030520	Palsa	HTTDATKHAECLGYVSGIYDLQFAPKVPAGVCPPANLDPELLAEVVTAYLDTHEDGPAAEAIGQSVVRFFPCGSGAPGGPKKP
Ga0210251_112517772	3300030624	Soil	ATDATKHTQCLGYVSGIYDLQFAPKLPAGVCPPANLDAELLAEVVTAYLDTHEDGPAAEAIGQSVVRFFPCGPATAKKP
Ga0318516_103619151	3300031543	Soil	ELQVVDAAQHATCVGYVSGIYDLQFAPTPPRGVCPPSDFSPELLTEVVTAYLDTHEDGPAPAAIGQAIVRFFPCAEPHK
Ga0318546_111418221	3300031771	Soil	ILAVLAVSVVGLSQAHTQPASGWKQMTSRQLAAACHATDPAQHAGCVGYVYGVYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCAEQKR
Ga0318557_101758221	3300031795	Soil	MTSKQLAAACHASDPAQHAGCVGYVYGIYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCAEQKR
Ga0318568_103152313	3300031819	Soil	MTSKQLAAACHASDPAQHAGCVGYVYGIYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFP
Ga0306925_108675911	3300031890	Soil	AACHASDPAQHAGCVGYVYGIYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCAEQKR
Ga0306925_115622432	3300031890	Soil	MHPEPPRSRKRVPCGSRLAFVAMTALATAAAAQTQSLGWKPLTAKQLAAQCHASEPAPRATCVGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAEVVTAYVDTHDDGPASAAVGQAVVRFFPCVEPHR
Ga0306923_120077561	3300031910	Soil	MTSRQLAAACHATDPAQHAGCVGYVYGVYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCAEQKR
Ga0306923_125484181	3300031910	Soil	WKPMTSRQLAAACHSAEPAQHGLCLGYVAGIYDLQFAPTPPRGVCPPADFTPDLLAQVVMAYADTHEDGPAPAAIGQAIVRFFPCTEQHR
Ga0306921_104568601	3300031912	Soil	MASGKGRGRVAVLAALAVSVVGLSQAHTQPAPGWKQMTSKQLAAACHASDPAQHAGCVGYVYGIYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCA
Ga0306921_116827712	3300031912	Soil	RPLRTGPLRRMSLAVVATTALAAAVSAQTQSLPGWKQMTAKQLAAQCHASDAAPHATCVGYVSGIYDLQFAPTPPRGVCPPPDFTPDLLAEVVTAYVDTHDDGPASAAVGQAVVRFFPCVEPHR
Ga0306921_119440312	3300031912	Soil	PAQHAGCVGYVYGVYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCAEQKR
Ga0306926_107432332	3300031954	Soil	KGRGRVAVLAALAVSVVGLSQAHTQPAPGWKQMTSKQLAAACHATDPAQHAGCVGYVYGVYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCAEQKR
Ga0306926_117615692	3300031954	Soil	MFSSSWRLALLLAMTMGAAHAQPAQPAWKQMTSKQLATACHASEPAQHSGCVGYVYGVYDLQFAPTPPRGVCTPENLTPELLAQVVTAYADTHDDGPAPAAIGQAIVRFFPCTEQKR
Ga0306922_101816322	3300032001	Soil	MTSKQLAAACHASDPAQHAGCVGYVYGIYDLQFAPTPPRGVCAPENFTPELLAQVGTAYADTHEDGPAPAAIGQAIVRFFPCAEQKR
Ga0318559_105925422	3300032039	Soil	QPAPGWKQMTSKQLAAACHASDPAQHAGCVGYVYGIYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCAEQKR
Ga0318533_106776811	3300032059	Soil	VLAALAVSVVGLSQAHTQPAPGWKQMTSRQLAAACHATDPAQHAGCVGYVYGVYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCAEQKR
Ga0308173_117489871	3300032074	Soil	LTSLGLLLAISAHAQPAQQGWKQMTSRQLATACHSAEPGQHGLCLGYVSGIYDLQFAPTPPRGVCPPSDFTPDLLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCTEQHR
Ga0318540_105750471	3300032094	Soil	MVKRGQGPPPPRKGRGRTAIVGVLAVSVAGLLQAHAQPAPGWKQMTSKQLAAACHASDPAQHAGCVGYVYGIYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCAEQKR
Ga0311301_102352183	3300032160	Peatlands Soil	ACHATDAAQHAACVGYVSGIYDLQFAPTPPRGVCPPENFTPDLLAEVVTAYLDTHEDGPAPTAIGQAVVRFFPCGEARK
Ga0311301_108205301	3300032160	Peatlands Soil	MEFPGMATLLIGLCLPVALHAQSAPGWKLMTAKQLATACHSPDAAQHATCVGYVSGIYDLQFAPTPPRGVCPPQDLTPDLLTEVVTAYLDTHEDGPAPAAIGQAIVRFFPCSEPHK
Ga0307470_104713462	3300032174	Hardwood Forest Soil	ASDAAQHASCVGYVSGIYDLQFAPTPPRGVCPPENFTPDLLAEVVTAYLDTHDDGPAPAAIGQAIVRFFPCNEQRR
Ga0306920_1007646991	3300032261	Soil	SVAGLLQAHAQPAPGWKQMTSKQLAAACHASDPAQHAGCVGYVYGIYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCAEQKR
Ga0306920_1013105632	3300032261	Soil	VSAQTQSLPGWKQMTAKQLAAQCHASDAAPHATCVGYVSGIYDLQFAPTPPRGVCPPADFTPDLLAEVVTAYVDTHDDGPASAAVGQAVVRFFPCAEQHR
Ga0335081_107091982	3300032892	Soil	MDRAGRRELCGLVGGAIFACLGSFAAVSAQAQPATGWHPMSAKQLAAACHASDPAQHASCVGYVTGIYDLQFAPTPPRGVCAPSDFTPDLLAEVVTAYVDTHEDGPASTAVGQAVVRFFPCTEPHR
Ga0335069_105188931	3300032893	Soil	MGRGPAASLIALAMAGSVAYGQPVPGWKQMTSKQLAAACHASDPGQRGTCLGYVAGIYDLQFAPTPPRGICPPENFTPELLAQVVTAYADTHEDGPAPAAVGQAIVRFFPCAEQRR
Ga0335072_115288271	3300032898	Soil	RELATKCHSSDAAQHASCVGYVEGIYDLQFAPNPPRGVCPPSDFTPDLLAEVVTAYVDTHEDGPAPPAVGQAIVRFFPCTEQHR
Ga0335076_113408012	3300032955	Soil	MIAGAHAQTASGWKQLTAKELATKCHSSDAAQHASCVGYVEGIYDLQFAPNPPRGICPPSDFTPDLLAEVVTAYVDTHEDGPAPPAVGQAIVRFFPCSEQHK
Ga0310914_113390812	3300033289	Soil	SQAHTQPASGWKQMTSRQLAAACHATDPAQHAGCVGYVYGVYDLQFAPTPPRGVCAPENFTPELLAQVVTAYADTHEDGPAPAAIGQAIVRFFPCAEQKR
Ga0310811_102610293	3300033475	Soil	VALFAAAIPGAYAQPAQGWKQLTARELATRCHSSDAAQHASCVGYVQGIYDLQFAPIPPRGVCPPSDFTPDLLAEVVTAYADTHEDGPAPPAVGQAIVRFFPCGEGHK
Ga0310811_104256933	3300033475	Soil	VTLLASVAASAQPAPGWKPLSAKDLAIKCHSSEPGPHAACIAYAQAIFDLQFAPAPPRGICTPPDLSPELLAEVVTAYVDTHEDGPAPAAIGQAIVRFFPCTEQHR
Ga0316628_1022180332	3300033513	Soil	IASPAASQPASGWKQMTAKQLATECHSSDAAHHSVCVGYVSGIYDLQFAPAPPRGVCPPADFNPDLLTEVVTAYLDTHEDGPAPAAIGQAIVRFFPCTEQHR

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.80
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.80
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056806

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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