NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F056839

Metagenome / Metatranscriptome Family F056839

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F056839
Family Type Metagenome / Metatranscriptome
Number of Sequences 137
Average Sequence Length 44 residues
Representative Sequence IGITPEAGIEILQQRVDETQTELDALEDLARRNDIPPGTLRGQ
Number of Associated Samples 102
Number of Associated Scaffolds 137

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 3.68 %
% of genes near scaffold ends (potentially truncated) 95.62 %
% of genes from short scaffolds (< 2000 bps) 83.94 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (92.701 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(39.416 % of family members)
Environment Ontology (ENVO) Unclassified
(37.956 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.715 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 39.44%    β-sheet: 0.00%    Coil/Unstructured: 60.56%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.60
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 137 Family Scaffolds
PF11737DUF3300 62.04
PF11453DUF2950 5.11
PF00248Aldo_ket_red 2.19
PF07228SpoIIE 2.19
PF00873ACR_tran 1.46
PF03150CCP_MauG 1.46
PF01261AP_endonuc_2 1.46
PF07732Cu-oxidase_3 1.46
PF00672HAMP 0.73
PF01979Amidohydro_1 0.73
PF02321OEP 0.73
PF13590DUF4136 0.73
PF13533Biotin_lipoyl_2 0.73
PF01910Thiamine_BP 0.73

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 137 Family Scaffolds
COG1538Outer membrane protein TolCCell wall/membrane/envelope biogenesis [M] 1.46
COG1858Cytochrome c peroxidasePosttranslational modification, protein turnover, chaperones [O] 1.46
COG2132Multicopper oxidase with three cupredoxin domains (includes cell division protein FtsP and spore coat protein CotA)Cell cycle control, cell division, chromosome partitioning [D] 1.46
COG0011Thiamin-binding stress-response protein YqgV, UPF0045 familyCoenzyme transport and metabolism [H] 0.73


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms92.70 %
UnclassifiedrootN/A7.30 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001593|JGI12635J15846_10002824All Organisms → cellular organisms → Bacteria15157Open in IMG/M
3300004082|Ga0062384_100113237All Organisms → cellular organisms → Bacteria1475Open in IMG/M
3300005171|Ga0066677_10676300All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300005181|Ga0066678_11033173All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300005186|Ga0066676_10475972All Organisms → cellular organisms → Bacteria847Open in IMG/M
3300005187|Ga0066675_10349326Not Available1081Open in IMG/M
3300005468|Ga0070707_100411854All Organisms → cellular organisms → Bacteria1312Open in IMG/M
3300005468|Ga0070707_101981963All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300005554|Ga0066661_10118717All Organisms → cellular organisms → Bacteria → Proteobacteria1597Open in IMG/M
3300005555|Ga0066692_11010842All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300005559|Ga0066700_11098221All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium520Open in IMG/M
3300005610|Ga0070763_10666354All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300005921|Ga0070766_11086307All Organisms → cellular organisms → Bacteria552Open in IMG/M
3300005921|Ga0070766_11253273All Organisms → cellular organisms → Bacteria514Open in IMG/M
3300006034|Ga0066656_10048147All Organisms → cellular organisms → Bacteria2449Open in IMG/M
3300006173|Ga0070716_100384507All Organisms → cellular organisms → Bacteria1004Open in IMG/M
3300006176|Ga0070765_100126479All Organisms → cellular organisms → Bacteria2249Open in IMG/M
3300006176|Ga0070765_100684313All Organisms → cellular organisms → Bacteria969Open in IMG/M
3300006176|Ga0070765_101468101All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300006176|Ga0070765_101539139All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium626Open in IMG/M
3300006176|Ga0070765_101928252All Organisms → cellular organisms → Bacteria553Open in IMG/M
3300006755|Ga0079222_12525455All Organisms → cellular organisms → Bacteria516Open in IMG/M
3300006804|Ga0079221_11497887All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium541Open in IMG/M
3300006854|Ga0075425_100119121All Organisms → cellular organisms → Bacteria3012Open in IMG/M
3300006914|Ga0075436_100821323All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300007788|Ga0099795_10206682All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium830Open in IMG/M
3300007788|Ga0099795_10260111All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300009012|Ga0066710_103655582All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300009038|Ga0099829_10082078All Organisms → cellular organisms → Bacteria2471Open in IMG/M
3300009088|Ga0099830_10025971All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3890Open in IMG/M
3300009089|Ga0099828_11340648All Organisms → cellular organisms → Bacteria633Open in IMG/M
3300009090|Ga0099827_11316593All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300009143|Ga0099792_10316125All Organisms → cellular organisms → Bacteria932Open in IMG/M
3300010359|Ga0126376_10059800All Organisms → cellular organisms → Bacteria2738Open in IMG/M
3300010366|Ga0126379_11286472All Organisms → cellular organisms → Bacteria → Acidobacteria837Open in IMG/M
3300011269|Ga0137392_10216014All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1572Open in IMG/M
3300011269|Ga0137392_10353155All Organisms → cellular organisms → Bacteria1218Open in IMG/M
3300011270|Ga0137391_11183873All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300011271|Ga0137393_11568122All Organisms → cellular organisms → Bacteria548Open in IMG/M
3300012096|Ga0137389_10685072Not Available881Open in IMG/M
3300012189|Ga0137388_10589432Not Available1033Open in IMG/M
3300012189|Ga0137388_10687756All Organisms → cellular organisms → Bacteria950Open in IMG/M
3300012189|Ga0137388_11139744All Organisms → cellular organisms → Bacteria717Open in IMG/M
3300012202|Ga0137363_10544554All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300012202|Ga0137363_10894769All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300012202|Ga0137363_11196388All Organisms → cellular organisms → Bacteria646Open in IMG/M
3300012202|Ga0137363_11683867All Organisms → cellular organisms → Bacteria → Proteobacteria527Open in IMG/M
3300012203|Ga0137399_10009627All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae5721Open in IMG/M
3300012203|Ga0137399_10887431All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300012207|Ga0137381_10083546All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2686Open in IMG/M
3300012349|Ga0137387_10188427All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1479Open in IMG/M
3300012361|Ga0137360_11296464All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300012362|Ga0137361_10698097All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300012363|Ga0137390_11101603All Organisms → cellular organisms → Bacteria743Open in IMG/M
3300012363|Ga0137390_11999888All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300012582|Ga0137358_10231951All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1257Open in IMG/M
3300012683|Ga0137398_10221697All Organisms → cellular organisms → Bacteria1253Open in IMG/M
3300012918|Ga0137396_10109289All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium1982Open in IMG/M
3300012918|Ga0137396_10447284All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium958Open in IMG/M
3300012918|Ga0137396_11099584All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300012923|Ga0137359_10073411All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2993Open in IMG/M
3300012923|Ga0137359_10277505All Organisms → cellular organisms → Bacteria1494Open in IMG/M
3300012923|Ga0137359_10418562All Organisms → cellular organisms → Bacteria1187Open in IMG/M
3300012923|Ga0137359_11433656All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300012927|Ga0137416_10164294All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium1751Open in IMG/M
3300012930|Ga0137407_10519264All Organisms → cellular organisms → Bacteria1113Open in IMG/M
3300012944|Ga0137410_10540479All Organisms → cellular organisms → Bacteria957Open in IMG/M
3300015054|Ga0137420_1284096All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300015054|Ga0137420_1423729All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae8104Open in IMG/M
3300018468|Ga0066662_10462072All Organisms → cellular organisms → Bacteria1141Open in IMG/M
3300019789|Ga0137408_1286376All Organisms → cellular organisms → Bacteria1506Open in IMG/M
3300020170|Ga0179594_10039158All Organisms → cellular organisms → Bacteria1555Open in IMG/M
3300020199|Ga0179592_10121142All Organisms → cellular organisms → Bacteria1200Open in IMG/M
3300020199|Ga0179592_10196529All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300020579|Ga0210407_11273641All Organisms → cellular organisms → Bacteria550Open in IMG/M
3300020580|Ga0210403_10037390All Organisms → cellular organisms → Bacteria3880Open in IMG/M
3300020581|Ga0210399_11463484All Organisms → cellular organisms → Bacteria531Open in IMG/M
3300021086|Ga0179596_10337200All Organisms → cellular organisms → Bacteria756Open in IMG/M
3300021180|Ga0210396_11483696All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium558Open in IMG/M
3300021181|Ga0210388_11578904Not Available546Open in IMG/M
3300021401|Ga0210393_10436724Not Available1068Open in IMG/M
3300021404|Ga0210389_10026220All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4490Open in IMG/M
3300021404|Ga0210389_10286893All Organisms → cellular organisms → Bacteria1289Open in IMG/M
3300021432|Ga0210384_10272942All Organisms → cellular organisms → Bacteria1522Open in IMG/M
3300021432|Ga0210384_10666886All Organisms → cellular organisms → Bacteria932Open in IMG/M
3300021479|Ga0210410_11496662All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300021479|Ga0210410_11766869All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300021559|Ga0210409_10263090Not Available1560Open in IMG/M
3300021559|Ga0210409_11681133All Organisms → cellular organisms → Bacteria → Proteobacteria511Open in IMG/M
3300024182|Ga0247669_1000003All Organisms → cellular organisms → Bacteria363817Open in IMG/M
3300024246|Ga0247680_1031960All Organisms → cellular organisms → Bacteria761Open in IMG/M
3300024283|Ga0247670_1088143All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium569Open in IMG/M
3300024330|Ga0137417_1262171All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium579Open in IMG/M
3300024330|Ga0137417_1464569All Organisms → cellular organisms → Bacteria6036Open in IMG/M
3300025905|Ga0207685_10361764All Organisms → cellular organisms → Bacteria734Open in IMG/M
3300025915|Ga0207693_11352560Not Available531Open in IMG/M
3300025922|Ga0207646_10274454All Organisms → cellular organisms → Bacteria1524Open in IMG/M
3300025922|Ga0207646_10282319All Organisms → cellular organisms → Bacteria1500Open in IMG/M
3300026298|Ga0209236_1159421All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium938Open in IMG/M
3300026301|Ga0209238_1070621All Organisms → cellular organisms → Bacteria1228Open in IMG/M
3300026333|Ga0209158_1144623All Organisms → cellular organisms → Bacteria874Open in IMG/M
3300026360|Ga0257173_1011072All Organisms → cellular organisms → Bacteria1032Open in IMG/M
3300026371|Ga0257179_1033376All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium635Open in IMG/M
3300026376|Ga0257167_1029566All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium811Open in IMG/M
3300026467|Ga0257154_1066874All Organisms → cellular organisms → Bacteria566Open in IMG/M
3300026551|Ga0209648_10065638All Organisms → cellular organisms → Bacteria3066Open in IMG/M
3300026551|Ga0209648_10362525All Organisms → cellular organisms → Bacteria987Open in IMG/M
3300026557|Ga0179587_10804272All Organisms → cellular organisms → Bacteria620Open in IMG/M
3300026557|Ga0179587_11058742All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300027109|Ga0208603_1037466All Organisms → cellular organisms → Bacteria752Open in IMG/M
3300027616|Ga0209106_1025377All Organisms → cellular organisms → Bacteria1298Open in IMG/M
3300027633|Ga0208988_1056843All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300027663|Ga0208990_1028374All Organisms → cellular organisms → Bacteria → Proteobacteria1788Open in IMG/M
3300027663|Ga0208990_1189874All Organisms → cellular organisms → Bacteria526Open in IMG/M
3300027748|Ga0209689_1395912All Organisms → cellular organisms → Bacteria529Open in IMG/M
3300027855|Ga0209693_10287489All Organisms → cellular organisms → Bacteria803Open in IMG/M
3300027857|Ga0209166_10632674All Organisms → cellular organisms → Bacteria542Open in IMG/M
3300027882|Ga0209590_10799926All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium599Open in IMG/M
3300027889|Ga0209380_10057374All Organisms → cellular organisms → Bacteria2213Open in IMG/M
3300027903|Ga0209488_10134270All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1866Open in IMG/M
3300028047|Ga0209526_10002130All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae13335Open in IMG/M
3300028536|Ga0137415_10072207All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3312Open in IMG/M
3300028536|Ga0137415_10801070Not Available752Open in IMG/M
3300029636|Ga0222749_10373421All Organisms → cellular organisms → Bacteria751Open in IMG/M
3300029701|Ga0222748_1000092All Organisms → cellular organisms → Bacteria4912Open in IMG/M
3300031231|Ga0170824_119057142All Organisms → cellular organisms → Bacteria863Open in IMG/M
3300031708|Ga0310686_101085525All Organisms → cellular organisms → Bacteria587Open in IMG/M
3300031718|Ga0307474_10318004All Organisms → cellular organisms → Bacteria1201Open in IMG/M
3300031754|Ga0307475_11137010Not Available610Open in IMG/M
3300031754|Ga0307475_11293796All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300031823|Ga0307478_10469977All Organisms → cellular organisms → Bacteria1047Open in IMG/M
3300031823|Ga0307478_10756377All Organisms → cellular organisms → Bacteria814Open in IMG/M
3300031962|Ga0307479_11052109All Organisms → cellular organisms → Bacteria781Open in IMG/M
3300031962|Ga0307479_12010902All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300032174|Ga0307470_10596056All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300032205|Ga0307472_100039794All Organisms → cellular organisms → Bacteria2827Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil39.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil17.52%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil7.30%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.57%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil6.57%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.11%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.11%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.38%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.46%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.46%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.46%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil0.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.73%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil0.73%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.73%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.73%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300004082Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3EnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005181Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005187Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124EnvironmentalOpen in IMG/M
3300005468Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005559Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149EnvironmentalOpen in IMG/M
3300005610Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3EnvironmentalOpen in IMG/M
3300005921Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006176Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006914Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5Host-AssociatedOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300020170Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021181Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021432Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-MEnvironmentalOpen in IMG/M
3300021479Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-MEnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300024182Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK10EnvironmentalOpen in IMG/M
3300024246Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21EnvironmentalOpen in IMG/M
3300024283Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK11EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026298Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300026333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)EnvironmentalOpen in IMG/M
3300026360Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-19-BEnvironmentalOpen in IMG/M
3300026371Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-BEnvironmentalOpen in IMG/M
3300026376Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-BEnvironmentalOpen in IMG/M
3300026467Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-AEnvironmentalOpen in IMG/M
3300026514Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-BEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027109Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF008 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027633Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027663Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027748Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)EnvironmentalOpen in IMG/M
3300027855Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)EnvironmentalOpen in IMG/M
3300027857Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027889Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300029636Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300029701Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031708FICUS49499 Metagenome Czech Republic combined assemblyEnvironmentalOpen in IMG/M
3300031718Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031823Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12635J15846_1000282413300001593Forest SoilITPEAGIEILQQRVSETQSELDALEDLARRNDIPPGTLRGY*
Ga0062384_10011323733300004082Bog Forest SoilEDIGITPEAGIEILKQRVMEVQTRLDDLEDLARRNDIEPGTLRRL*
Ga0066677_1067630023300005171SoilTPEAGIQILRQRVMEEQTRLNDLEDLARRNDVEPGTLRGR*
Ga0066678_1103317323300005181SoilLVGDDFATTPEAGIEILQHRVNETQTELDELEDLARRNDIPPGTLRGQ*
Ga0066676_1047597223300005186SoilVDEGDIGITPEAGIEFLQQRLNEAQMGLDALEDLARRNDISPGTLRGK*
Ga0066675_1034932623300005187SoilITPEAGVEILQQRATAVQEKLSDLEDLARRNDIEPGTLRGQ*
Ga0070707_10041185423300005468Corn, Switchgrass And Miscanthus RhizosphereTPEVGIEILQERVSETQSELNDLEDLARRNDIEPGTLRGQ*
Ga0070707_10198196323300005468Corn, Switchgrass And Miscanthus RhizosphereGITPEAGIEILRQRAKETQTELAALDDLARRNGIPPGALRGR*
Ga0066661_1011871733300005554SoilPEAGIEILQQRVSETQSELDALEDLARRNDILPGILRSH*
Ga0066692_1101084223300005555SoilEGDIGITPEAGIEFLQQRLNEAQMGLDALEDLARRNDISPGTLRGK*
Ga0066700_1109822113300005559SoilTAMTGGMPDAGIEILQRRVHETQNELDALEDLVRHNGIPPGTLRGQ*
Ga0070763_1066635423300005610SoilDEGDVGITPQAGIETLQRLVNEAQTELDALGDLARRHRVPPGTLRSQ*
Ga0070766_1108630713300005921SoilAITPDAGIEILRQRISEAQERLDDLEDLARRDDVEPGVLRGQ*
Ga0070766_1125327323300005921SoilGEDFATTPDAGIEILQQHVMEEQVRFDNLEDLARRNDIEPGALRGQ*
Ga0066656_1004814733300006034SoilITPEAGIEFLQQRLNEAQMGLDALEDLARRNDISPGTLRGK*
Ga0070716_10038450713300006173Corn, Switchgrass And Miscanthus RhizosphereHTGITPESGIEILQQRVSKAQAELDALEDLARRNDIDPGTLRGE*
Ga0070765_10012647913300006176SoilGDIGITPESGMETLRQCVSEAQTELDEPEDLGRRHDIPPGTLRGR*
Ga0070765_10068431323300006176SoilEAGIEILQERVNDTQANLDALEDLARRNDIELGTLRGE*
Ga0070765_10146810123300006176SoilLVGEDFATTPEAGIEILQQRVNEAQTEFDALEDLARRNDIEPGTLRGQ*
Ga0070765_10153913923300006176SoilGDIGITPEAGIEILQRRVSEIQSELDDLEDLARHNDIPPGTLRGQ*
Ga0070765_10192825213300006176SoilTPEAGIEILQERVNEAQAELDALEEMARRNDILPGTLGRQ*
Ga0079222_1252545513300006755Agricultural SoilGINLDDGDIGITPEAGIELLQQHVNETQTELDALEDLARRNDIEPGTLRGQ*
Ga0079221_1149788713300006804Agricultural SoilGINFEKGDIGITLEAGIEILQQRVSETQSELDALHDLARRNDIPPGALRGQ*
Ga0075425_10011912143300006854Populus RhizosphereLEEGDIGITPEAGIEILQEGVNETESELDALEDLARRNDILPGTLRD*
Ga0075436_10082132313300006914Populus RhizosphereIEILQEGVNETESELDALEDLARRNDILPGTLRD*
Ga0099795_1020668223300007788Vadose Zone SoilAGIEILQRRVSKIQSELDDLEDVARHNDIPPGMLRGQ*
Ga0099795_1026011113300007788Vadose Zone SoilIEILRQRVNETQAELDALEDLARRNNIPPGTVRGQ*
Ga0066710_10365558223300009012Grasslands SoilEDFAITPEAGIQILRQRVMEEQTRLNDLEDLARRNDVEPGTLRGR
Ga0099829_1008207843300009038Vadose Zone SoilVEGDVGITPQSGIEILRQRVNETQAELDALEDLARRNNIPPGTVRGQ*
Ga0099830_1002597113300009088Vadose Zone SoilGDISITPEAGIEFLQQRLNEAQMGLDALEDLARRNDISPGTLRGQ*
Ga0099828_1134064823300009089Vadose Zone SoilLVGDDFATTPEAGIEILRQRVNETQTELDELEDLARRNDIPPGTLRGQ*
Ga0099827_1131659323300009090Vadose Zone SoilITPEAGIEILRQRAKETQTELDALDDLARRNGIPPGALRGQ*
Ga0099792_1031612513300009143Vadose Zone SoilDGDIGITPEAGIEILQQRVSETQSDLDALADLARHNDIPPGTLRGQ*
Ga0126376_1005980033300010359Tropical Forest SoilPGITPEATIESLRDRVRATQSELDSLEDLARRNEMAPGILRGQ*
Ga0126379_1128647213300010366Tropical Forest SoilMTLEAGTQILQRRVRETESDLDGLEDLARREGIPPGTLRGD*
Ga0137392_1021601413300011269Vadose Zone SoilNLEEGDIGITPEAGIEILQRRVTEVQEKLGDLEDLARRNDIEPGTLRGQ*
Ga0137392_1035315523300011269Vadose Zone SoilEAGIEILQQRVNETQVDLDALEDLARRNDIPPGTLRGR*
Ga0137391_1118387313300011270Vadose Zone SoilITPEVAIETLQQLVNDVQADLDALESLARHNDIEPGALRGQ*
Ga0137393_1156812213300011271Vadose Zone SoilTPEGGIGILQQRVSETQSELDALEDLARRNDIPPGSLRGQ*
Ga0137389_1068507213300012096Vadose Zone SoilLDEGDIGITPEAGIEILQQEVNEPQTQLDELEDLAHRNGIPPGVLRGL*
Ga0137388_1058943213300012189Vadose Zone SoilNLDGGDIGITPEAGIEILEQRVMEEQARLDDLEDLARRNDIEPGTLRGL*
Ga0137388_1068775623300012189Vadose Zone SoilPEAGIEILQRRVNETQAELDALEDLARRNDIPPGILRGH*
Ga0137388_1113974423300012189Vadose Zone SoilIDLLQWRVYETQSDLDDLEDLARRNDIPPGVLRGQ*
Ga0137363_1054455423300012202Vadose Zone SoilLDEGDIAITPEAGIEILQQRVNEAQAELDALQDLARRDDIPPGTVRGR*
Ga0137363_1089476913300012202Vadose Zone SoilIGITPEAGIEILQQRVGETQSELGALEDLARRNDIPPGSLRGQ*
Ga0137363_1119638823300012202Vadose Zone SoilPEAGIEILQQRVSETQSELDALEDLARRNDIPPGTLRGY*
Ga0137363_1168386723300012202Vadose Zone SoilDYGDAGITPEAGIDILQQRVNEAQTELAALEDLARHNDIPPGALRGQ*
Ga0137399_1000962753300012203Vadose Zone SoilGITPEAGIDILQQRVNEAQTELAALEDLARHNDIPPGALRGQ*
Ga0137399_1088743123300012203Vadose Zone SoilETTGGINVDEGDIGITPEAGIEFLQQRLNEAQMGLDGLEDLARRNDISPGTLRGK*
Ga0137381_1008354613300012207Vadose Zone SoilGGIGITPEAGIEILQQRVKEAQAELDDLEGLARRNEIEPGTLRGE*
Ga0137387_1018842713300012349Vadose Zone SoilMAAGINRDEGGIGITPEAGIEILQQRVKEAQAELDDLEDLARRNEIEPGTLRGE*
Ga0137360_1129646413300012361Vadose Zone SoilGDIGITPEAGIEILQQRVSETQSELDALEDLARRNDIPPGTLRGY*
Ga0137361_1069809723300012362Vadose Zone SoilTPEAGIDILQQRVNEAQTELAALEDLARHNDIPPGALRGQ*
Ga0137390_1110160313300012363Vadose Zone SoilTLEDGIDLLQWRVYETQSDLDDLEDLARRNDIPPGVLRGQ*
Ga0137390_1199988813300012363Vadose Zone SoilDIGITPEAGIEILEQRVMEEQARLDDLENLARRNDIEPGTLRGL*
Ga0137358_1023195113300012582Vadose Zone SoilLDRGDIGITPEAGIEILQRRVYEIQSELDDLEDLARHNDIPPGTLRGQ*
Ga0137398_1022169713300012683Vadose Zone SoilITPQSGIEILRQRVNETQAELDALEDLARRNNIPPGTVRGQ*
Ga0137396_1010928913300012918Vadose Zone SoilTGGINVDEGDIGITPEAGIEFLQQRANETQTEIDALEELARRNDIPPGTLRGQ*
Ga0137396_1044728413300012918Vadose Zone SoilEGDVGITPEAGMEILQQRVEEARTELEALEDLARRNDIPPGILRGQ*
Ga0137396_1109958423300012918Vadose Zone SoilDEGDIGITPEAGIEFLQQRLSEAQAQFDALEDLSRRNDIPPGTLRGE*
Ga0137359_1007341143300012923Vadose Zone SoilGDIGITPEAGIEILQQRVSEARSELDALEDLARRNDIPPGTLRGQ*
Ga0137359_1027750523300012923Vadose Zone SoilGITPEAGIEFLQQRLNEAQMGLDALEDLARRNDISPGTLRGK*
Ga0137359_1041856223300012923Vadose Zone SoilGITPEAGIEFLQQRLNEAQMGLDALEDLARRNDISPGTLRGQ*
Ga0137359_1143365613300012923Vadose Zone SoilIDLVGDDFATTPEAGIEILQHRVNETQTELDELEDLARRNDIPPGTLRGQ*
Ga0137416_1016429433300012927Vadose Zone SoilPQRGIEIMDNRLTEEQARLPPLKVLARRNDIEPGTMRRL*
Ga0137407_1051926423300012930Vadose Zone SoilAGIEILRQRAKETETELDALDDLARRNGIPPGALRGQQDF*
Ga0137410_1054047913300012944Vadose Zone SoilEILQERLRETQTQLDVLEDLARRNDIPPGTLRGQ*
Ga0137420_128409623300015054Vadose Zone SoilEAGIQILQQRVMEEQARLDALEDLARRNDIEPGTLRRL*
Ga0137420_142372913300015054Vadose Zone SoilRSRYRYQAGIDILQQRVNEAQTELAALEDLARHNDIPPGALRGQ*
Ga0066662_1046207223300018468Grasslands SoilITPEAGIEILRQRATETQTELDALDDLARRNGIPPGALRGQ
Ga0137408_128637613300019789Vadose Zone SoilAGIEILRQRAEETQTELDALDDLARRNGIPPGALRGQ
Ga0179594_1003915813300020170Vadose Zone SoilFVLRSSAPEAGIEFLQQRLNEAQMGLDALEDLARRNDISPGTLRGK
Ga0179592_1012114213300020199Vadose Zone SoilGIDILQQRVNEAQTELAALEDLARHNDIPPGALRGQ
Ga0179592_1019652933300020199Vadose Zone SoilDIAITPEAGVEILQQRAKETQTELDTLDDLARRNDIPPGMMRGR
Ga0210407_1127364123300020579SoilIEILQQRVSETQSELDVLEDLARHNDIPPGVLRGQ
Ga0210403_1003739013300020580SoilNLDDGDRGITPEAGIEILRQRVSETQSELDALEDLARRNEIPPGILRGQ
Ga0210399_1146348413300020581SoilIEILQQWVEEAQAEFDDLEDLARRNDIEPGTLRGQ
Ga0179596_1033720033300021086Vadose Zone SoilEAGVEILQQRAKETQTELDALDDLARRNDIPPGMVRGQ
Ga0210396_1148369613300021180SoilIQILQQRVNETQSELDELDDLARRNDIEPGTLRGQ
Ga0210388_1157890413300021181SoilDEDFAVTPEAGIEILQQRVNETQSELDDLEDLARRNDIEPGTLRGQ
Ga0210393_1043672413300021401SoilDLVDESFAITPEAGIEILRQRVSQTQSELDALEDLARRNDIEPGTLRGQ
Ga0210389_1002622053300021404SoilPGGIDLVGEDFAITPDAGIEILRQRISEAQERLDDLEDLARRDDVEPGVLRGQ
Ga0210389_1028689313300021404SoilDFAVTPEAGIEILQQRVNETQSELDDLEDLARRNDIEPGTLRGQ
Ga0210384_1027294233300021432SoilLDEGDVSLTPEAGIEILRERVGETQSELDDLEDLARRNDIEQGALRGQ
Ga0210384_1066688613300021432SoilSITPEAGIEILQRRVSETQSELDALEDLARRNDIPPGALRGY
Ga0210410_1149666213300021479SoilNGGDVGSTPQAGIENLQQRVSETETQLDALEELARRNDMPPGLLRGQ
Ga0210410_1176686923300021479SoilLDDGDRGITPEAGIEILRQRVSETQSELDALEDLARRNEIPPGILRGQ
Ga0210409_1026309033300021559SoilGGINLNAGDVGITPEAGIEFLQRRVQEAQTKFDELEDLARRHAIPPGSLRGQ
Ga0210409_1168113313300021559SoilGVVILQQHVNETQSELDDLEDLARRNYIEPGTLRGQ
Ga0247669_1000003153300024182SoilMTGGTNLDGGDVGITPEAGIEILEQRVMQERARVDDLEDLARRNEIEPGTLRGQ
Ga0247680_103196023300024246SoilTPEAGVEILQQRVSETQSELDALEDLARRNDIPPGALRGQ
Ga0247670_108814313300024283SoilMTGGTNLDGGDVGITPEAGIEILEQRVMQERARVDDLEDLARRNEIEP
Ga0137417_126217123300024330Vadose Zone SoilVDEGHIGITPEAGIEFLQQRLNEAQMGLDTLEDLARRNDIPPGTLRGQ
Ga0137417_146456913300024330Vadose Zone SoilGAITPEAGIEILQQRVEEAQASFDDLEDLARRNAHPPGTLRGSEAPQHY
Ga0207685_1036176423300025905Corn, Switchgrass And Miscanthus RhizosphereTPEAGIEILQQRVNETQTELDALDDLARRNDIPPGAVRGR
Ga0207693_1135256013300025915Corn, Switchgrass And Miscanthus RhizosphereMTADIGITPEAGIEILQQRVSETQAQLDALEDLARRNDMPPGTLRGQQ
Ga0207646_1027445413300025922Corn, Switchgrass And Miscanthus RhizosphereIGITPEAGIEILQQRVDETQTELDALEDLARRNDIPPGTLRGQ
Ga0207646_1028231913300025922Corn, Switchgrass And Miscanthus RhizosphereDEGDVSITPEVGIEILQERVSETQSELNDLEDLARRNDIEPGTLRGQ
Ga0209236_115942113300026298Grasslands SoilGIEILQRRVYEIQSELDDLEDLARHNDIPPGMLRGQ
Ga0209238_107062123300026301Grasslands SoilTPEAGVEILQQRATAVQEKLSDLEDLARRNDIEPGTLRGQ
Ga0209158_114462313300026333SoilGGINLDDGDIGITPEAGIEFLQQRVNETQTECDALEDLARRNDILPGTLRGQ
Ga0257173_101107213300026360SoilIEFLQQRLNEAQMGLDALEDLARRNDISPGTLRGQ
Ga0257179_103337613300026371SoilDVGITPDAGIEILRQRVQDTESDLNALEDLARRNGIQPGTLRGR
Ga0257167_102956623300026376SoilLDRGDIGITPEAGIEILQRRVYEMQGELDDLEDLARHNDIPPGMLRGQ
Ga0257154_106687413300026467SoilTPEAGMEILQQRVSETQTEFDALEDLARRNDLPPGTLRGQ
Ga0257168_107265523300026514SoilIAITLEDGIELLEQRVEETHMDFDELEDLARRNAIPPGTLRGQW
Ga0209648_1006563843300026551Grasslands SoilITPEAGIEILQERVSETQTELDALEDLARRNDIPPGTLRGQ
Ga0209648_1036252513300026551Grasslands SoilDFAITPEAGIDILQQRVNEAQREFDALEDLARRNDISPGTLRGQ
Ga0179587_1080427223300026557Vadose Zone SoilGDIAITPEAGVEILQQRAKETQTELDTLDDLARRNDIPPGMMRGR
Ga0179587_1105874223300026557Vadose Zone SoilPQAGIEILQQRLSEAQSQLDALEDMARRNGIEPGTLRGQ
Ga0208603_103746613300027109Forest SoilEDFATTPDAGIEILQQHVMEEQVRFDNLEDLARRNDIEPGALRGQ
Ga0209106_102537723300027616Forest SoilGGINLNDGDVGITPEAGIEILQQRVSETQTHLDALEDLARHNDMPPGTLRGQ
Ga0208988_105684313300027633Forest SoilDTAITPESGIEILQQRVSETHTHLDALEDLARHNDMPPGTLRGQ
Ga0208990_102837413300027663Forest SoilLDDGDVGITPEAGIQILQQRVSETQTHLDALEDLAHHNDMPPGTLRGQ
Ga0208990_118987413300027663Forest SoilGDIGITPEAGIEFLQQRLNEAQMGLDALEDLARRNDIPPGTLRGE
Ga0209689_139591213300027748SoilAGIEFLQQRMYETQTKLDALEDLAHRNDIEPGTLRGQ
Ga0209693_1028748923300027855SoilDLVGEDFAITPEAGVEILQQRISKAQARLDDLEDLARRDDVEPGVLRGQ
Ga0209166_1063267413300027857Surface SoilPEAGIAILQQRVSETQSELDALEDLARRNDIPPGALRGQ
Ga0209590_1079992623300027882Vadose Zone SoilPQAGIEILAARVRELQSQLDDLANLARQNDIPPGVLRG
Ga0209380_1005737433300027889SoilGEDFATTPDAGIEILQQHVMEEQVRFDNLEDLARRNDIEPGALRGQ
Ga0209488_1013427013300027903Vadose Zone SoilGIEILQQRVSETQSDLDALADLARHNDIPPGTLRGQ
Ga0209526_10002130103300028047Forest SoilITPEAGIEILQQRVSETQTHLDALEDLARHNDMPPGTLRGQ
Ga0137415_1007220743300028536Vadose Zone SoilEAGIEILQQRVSETQSELDALEDLARRNDIPPGILRGH
Ga0137415_1080107013300028536Vadose Zone SoilITPQSGIEILRQRVNETQAELDALEDLARRNNIPPGTVRGQ
Ga0222749_1037342113300029636SoilTTGGIDLSGEDFATTPDAGIEILQQRVMEEQVRFDNLEDLARSNDIEPGALRGQ
Ga0222748_100009213300029701SoilEDFAITPEAGIEILQQGVSEAQSELDDLEDLARRNDITPGTLRGQ
Ga0170824_11905714213300031231Forest SoilGGDVGITAQAGIEILQQRVSETETQLDELEDLARRNYMPPGLLRGQ
Ga0310686_10108552523300031708SoilGEDFAITPEAGIEILQQRVNEAQTELDALEDLARRNDIEPGTLRGQ
Ga0307474_1031800413300031718Hardwood Forest SoilDDGDIGITPEAGVEILRQRVNEAQAELDALENLARRNDIPPGTLRGQ
Ga0307475_1113701023300031754Hardwood Forest SoilGIEILQQRVNETQMALDNLEDLARRNDIPPGTLRGQ
Ga0307475_1129379613300031754Hardwood Forest SoilLVEGDVGITPQSGIEILQQRVNETQAKLGALEDLARRNGLAPGALRVE
Ga0307478_1046997723300031823Hardwood Forest SoilGITPEAGIEILHQHVSEAQAELDALEDLARRNDIEPGILRGQ
Ga0307478_1075637723300031823Hardwood Forest SoilITPEAGIEILERRVKEAQTELDALEDLARRNDIPPGTLRGQ
Ga0307479_1105210913300031962Hardwood Forest SoilTPEAGIEILQQRVNEGQTELDALEDLARRNDIPPGTLRGQ
Ga0307479_1201090213300031962Hardwood Forest SoilIGITPEAGIEILEQRMNEAQTELDALEDLAHRNAIAPGTLRGQ
Ga0307470_1059605623300032174Hardwood Forest SoilNLEEGDIGITPEAGIEILQRRVGETQSGLDALEDLARRNDIPPGALRGQ
Ga0307472_10003979443300032205Hardwood Forest SoilMTGGMNLDDGDIGITPEAGIEFLQQRVNETQTDLDALEDLARRNDIEPGTLRGQ


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.