NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F056879

Metagenome Family F056879

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F056879
Family Type Metagenome
Number of Sequences 137
Average Sequence Length 59 residues
Representative Sequence MLRVKSLMICFAFIVAFAGAALGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRK
Number of Associated Samples 116
Number of Associated Scaffolds 137

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 89.78 %
% of genes near scaffold ends (potentially truncated) 99.27 %
% of genes from short scaffolds (< 2000 bps) 91.97 %
Associated GOLD sequencing projects 112
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (93.431 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(16.058 % of family members)
Environment Ontology (ENVO) Unclassified
(35.036 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(45.985 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 51.22%    β-sheet: 0.00%    Coil/Unstructured: 48.78%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 137 Family Scaffolds
PF09084NMT1 20.44
PF04909Amidohydro_2 2.92
PF13379NMT1_2 2.92
PF02798GST_N 1.46
PF01274Malate_synthase 1.46
PF03401TctC 0.73
PF07883Cupin_2 0.73
PF07690MFS_1 0.73
PF04392ABC_sub_bind 0.73
PF01546Peptidase_M20 0.73
PF069833-dmu-9_3-mt 0.73

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 137 Family Scaffolds
COG0715ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic componentInorganic ion transport and metabolism [P] 20.44
COG4521ABC-type taurine transport system, periplasmic componentInorganic ion transport and metabolism [P] 20.44
COG2225Malate synthaseEnergy production and conversion [C] 1.46
COG2764Zn-dependent glyoxalase, PhnB familyEnergy production and conversion [C] 0.73
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.73
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 0.73
COG3865Glyoxalase superfamily enzyme, possible 3-demethylubiquinone-9 3-methyltransferaseGeneral function prediction only [R] 0.73

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms93.43 %
UnclassifiedrootN/A6.57 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918013|NODE_3092_length_1789_cov_11.666853All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1821Open in IMG/M
3300000559|F14TC_101477368All Organisms → cellular organisms → Bacteria → Proteobacteria537Open in IMG/M
3300000787|JGI11643J11755_11731127All Organisms → cellular organisms → Bacteria551Open in IMG/M
3300000881|JGI10215J12807_1430927All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium579Open in IMG/M
3300000953|JGI11615J12901_13630801All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300000956|JGI10216J12902_104606624Not Available887Open in IMG/M
3300000956|JGI10216J12902_109419745All Organisms → cellular organisms → Bacteria → Proteobacteria2237Open in IMG/M
3300003991|Ga0055461_10206050All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300004157|Ga0062590_102567311All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium541Open in IMG/M
3300004463|Ga0063356_101264273All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1077Open in IMG/M
3300004463|Ga0063356_101401169All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1029Open in IMG/M
3300004463|Ga0063356_102365259All Organisms → cellular organisms → Bacteria812Open in IMG/M
3300004463|Ga0063356_102760933Not Available756Open in IMG/M
3300004643|Ga0062591_100877991All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium838Open in IMG/M
3300005174|Ga0066680_10440071All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium824Open in IMG/M
3300005179|Ga0066684_10757167All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium646Open in IMG/M
3300005186|Ga0066676_11129282All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300005294|Ga0065705_10943996All Organisms → cellular organisms → Bacteria → Proteobacteria563Open in IMG/M
3300005332|Ga0066388_106718205All Organisms → cellular organisms → Bacteria579Open in IMG/M
3300005339|Ga0070660_100201130All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1616Open in IMG/M
3300005445|Ga0070708_100902110All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium830Open in IMG/M
3300005549|Ga0070704_101635963Not Available594Open in IMG/M
3300005560|Ga0066670_10823926All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium563Open in IMG/M
3300005713|Ga0066905_100163809All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1619Open in IMG/M
3300006058|Ga0075432_10063009All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1323Open in IMG/M
3300006169|Ga0082029_1643151All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium600Open in IMG/M
3300006196|Ga0075422_10511977All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium546Open in IMG/M
3300006237|Ga0097621_101222190All Organisms → cellular organisms → Bacteria708Open in IMG/M
3300006845|Ga0075421_101404818All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium768Open in IMG/M
3300006846|Ga0075430_100580466All Organisms → cellular organisms → Bacteria925Open in IMG/M
3300006846|Ga0075430_101447699All Organisms → cellular organisms → Bacteria → Proteobacteria564Open in IMG/M
3300006847|Ga0075431_102014162All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium532Open in IMG/M
3300006852|Ga0075433_10192664All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1813Open in IMG/M
3300006852|Ga0075433_11287508All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium633Open in IMG/M
3300006852|Ga0075433_11452147All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium593Open in IMG/M
3300006852|Ga0075433_11716434All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium540Open in IMG/M
3300006853|Ga0075420_101177263All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium659Open in IMG/M
3300006853|Ga0075420_101751168All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium532Open in IMG/M
3300006854|Ga0075425_100474592All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1440Open in IMG/M
3300006881|Ga0068865_102113718All Organisms → cellular organisms → Bacteria → Proteobacteria512Open in IMG/M
3300006969|Ga0075419_10800034All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium675Open in IMG/M
3300007004|Ga0079218_11174162All Organisms → cellular organisms → Bacteria793Open in IMG/M
3300009089|Ga0099828_10248223All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1596Open in IMG/M
3300009091|Ga0102851_10675767All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1089Open in IMG/M
3300009137|Ga0066709_100024009All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium6248Open in IMG/M
3300009147|Ga0114129_10532122All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1531Open in IMG/M
3300009147|Ga0114129_10564575All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1478Open in IMG/M
3300009147|Ga0114129_10845545All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1164Open in IMG/M
3300009147|Ga0114129_13031789All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium551Open in IMG/M
3300009176|Ga0105242_10273512All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1531Open in IMG/M
3300009678|Ga0105252_10409038All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium621Open in IMG/M
3300009816|Ga0105076_1054767All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium727Open in IMG/M
3300010029|Ga0105074_1034332Not Available871Open in IMG/M
3300010046|Ga0126384_11930121All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium563Open in IMG/M
3300010047|Ga0126382_10993814All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium735Open in IMG/M
3300010048|Ga0126373_10305211All Organisms → cellular organisms → Bacteria1589Open in IMG/M
3300010358|Ga0126370_12356258All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium528Open in IMG/M
3300010371|Ga0134125_12721149All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium538Open in IMG/M
3300010398|Ga0126383_12505724All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium600Open in IMG/M
3300010399|Ga0134127_10098177All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2558Open in IMG/M
3300010400|Ga0134122_10006453All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria8704Open in IMG/M
3300011119|Ga0105246_10673533All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium903Open in IMG/M
3300011405|Ga0137340_1028655All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1035Open in IMG/M
3300011434|Ga0137464_1274650All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300011439|Ga0137432_1132381All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales795Open in IMG/M
3300011439|Ga0137432_1229483All Organisms → cellular organisms → Bacteria599Open in IMG/M
3300011442|Ga0137437_1012555All Organisms → cellular organisms → Bacteria2918Open in IMG/M
3300011445|Ga0137427_10097921All Organisms → cellular organisms → Bacteria1183Open in IMG/M
3300012173|Ga0137327_1108488All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium618Open in IMG/M
3300012198|Ga0137364_11460747All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium504Open in IMG/M
3300012203|Ga0137399_10569202All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium952Open in IMG/M
3300012203|Ga0137399_10964124All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium718Open in IMG/M
3300012204|Ga0137374_10269570All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1415Open in IMG/M
3300012208|Ga0137376_10036216All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3956Open in IMG/M
3300012350|Ga0137372_10015893All Organisms → cellular organisms → Bacteria7134Open in IMG/M
3300012354|Ga0137366_10387343All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium1019Open in IMG/M
3300012354|Ga0137366_10910473All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium618Open in IMG/M
3300012360|Ga0137375_10126859All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium2538Open in IMG/M
3300012360|Ga0137375_10427834All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1148Open in IMG/M
3300012492|Ga0157335_1021033All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium620Open in IMG/M
3300012927|Ga0137416_11171049All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium691Open in IMG/M
3300012955|Ga0164298_11002414All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium617Open in IMG/M
3300012971|Ga0126369_13445938All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium518Open in IMG/M
3300012988|Ga0164306_10842713All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium742Open in IMG/M
3300013102|Ga0157371_10119947All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1870Open in IMG/M
3300013297|Ga0157378_12881254All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium533Open in IMG/M
3300013306|Ga0163162_10957662All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium967Open in IMG/M
3300013306|Ga0163162_12685973All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium573Open in IMG/M
3300014879|Ga0180062_1011824All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1749Open in IMG/M
3300014879|Ga0180062_1104740Not Available647Open in IMG/M
3300015373|Ga0132257_102370900All Organisms → cellular organisms → Bacteria688Open in IMG/M
3300015374|Ga0132255_103934239All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium631Open in IMG/M
3300016270|Ga0182036_10943679All Organisms → cellular organisms → Bacteria709Open in IMG/M
3300016357|Ga0182032_11044802All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium699Open in IMG/M
3300017930|Ga0187825_10005661All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium4166Open in IMG/M
3300017936|Ga0187821_10169924All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium829Open in IMG/M
3300018031|Ga0184634_10311040All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium723Open in IMG/M
3300018054|Ga0184621_10245612All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300018061|Ga0184619_10122369All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1178Open in IMG/M
3300018063|Ga0184637_10492878All Organisms → cellular organisms → Bacteria → Proteobacteria713Open in IMG/M
3300018067|Ga0184611_1130033All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium886Open in IMG/M
3300018076|Ga0184609_10381452All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium657Open in IMG/M
3300018079|Ga0184627_10356926All Organisms → cellular organisms → Bacteria764Open in IMG/M
3300018082|Ga0184639_10508563All Organisms → cellular organisms → Bacteria606Open in IMG/M
3300018476|Ga0190274_10476026Not Available1240Open in IMG/M
3300018482|Ga0066669_10454974All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1100Open in IMG/M
3300019362|Ga0173479_10211816All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium826Open in IMG/M
3300025315|Ga0207697_10143460All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1037Open in IMG/M
3300025555|Ga0210121_1070477All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300025911|Ga0207654_10178555All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1384Open in IMG/M
3300025917|Ga0207660_10192668All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1588Open in IMG/M
3300025918|Ga0207662_10405463All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium925Open in IMG/M
3300025919|Ga0207657_10358623All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1149Open in IMG/M
3300025926|Ga0207659_10673160All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium885Open in IMG/M
3300025932|Ga0207690_10334801All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1193Open in IMG/M
3300025971|Ga0210102_1077528All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium717Open in IMG/M
3300026307|Ga0209469_1078861All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium986Open in IMG/M
3300027533|Ga0208185_1125947Not Available596Open in IMG/M
3300027695|Ga0209966_1023200All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1218Open in IMG/M
3300027840|Ga0209683_10052629All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1784Open in IMG/M
3300027840|Ga0209683_10310306All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300027873|Ga0209814_10259376All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium754Open in IMG/M
3300027876|Ga0209974_10006337All Organisms → cellular organisms → Bacteria → Proteobacteria4133Open in IMG/M
3300027907|Ga0207428_11229092All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium521Open in IMG/M
3300027907|Ga0207428_11311848All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium501Open in IMG/M
3300027909|Ga0209382_10116352All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium3120Open in IMG/M
(restricted) 3300031150|Ga0255311_1096298All Organisms → cellular organisms → Bacteria639Open in IMG/M
3300031548|Ga0307408_102524773All Organisms → cellular organisms → Bacteria500Open in IMG/M
3300031720|Ga0307469_11139575All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium735Open in IMG/M
3300031901|Ga0307406_12120231Not Available504Open in IMG/M
3300031965|Ga0326597_11510659All Organisms → cellular organisms → Bacteria645Open in IMG/M
3300032013|Ga0310906_10676640All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium718Open in IMG/M
3300033158|Ga0335077_12015845All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium536Open in IMG/M
3300034176|Ga0364931_0321028All Organisms → cellular organisms → Bacteria → Proteobacteria515Open in IMG/M
3300034354|Ga0364943_0037424All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1568Open in IMG/M
3300034417|Ga0364941_030534All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium1144Open in IMG/M
3300034417|Ga0364941_043685Not Available987Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere16.06%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.76%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil8.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.03%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment5.84%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.38%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere4.38%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.65%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment2.92%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.19%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.19%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.19%
Wetland SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment1.46%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment1.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.46%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.46%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.46%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.46%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand1.46%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.46%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.46%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere1.46%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.46%
Freshwater WetlandsEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands0.73%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.73%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.73%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.73%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.73%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil0.73%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.73%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.73%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.73%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.73%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.73%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.73%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.73%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.73%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.73%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.73%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.73%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.73%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.73%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918013Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)EnvironmentalOpen in IMG/M
3300000559Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemlyEnvironmentalOpen in IMG/M
3300000787Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000881Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soilEnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300003991Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqB_D1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005174Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005186Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005560Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009091Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009678Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100EnvironmentalOpen in IMG/M
3300009816Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10EnvironmentalOpen in IMG/M
3300010029Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011405Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT400_2EnvironmentalOpen in IMG/M
3300011434Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT814_2EnvironmentalOpen in IMG/M
3300011439Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2EnvironmentalOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012173Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012204Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012360Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaGEnvironmentalOpen in IMG/M
3300012492Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.yng.030610Host-AssociatedOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014879Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_10DEnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300017930Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5EnvironmentalOpen in IMG/M
3300017936Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_1EnvironmentalOpen in IMG/M
3300018031Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1EnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018061Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1EnvironmentalOpen in IMG/M
3300018063Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2EnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018076Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coexEnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025555Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqB_D1 (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025971Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushOxbow_ThreeSqC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300026307Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)EnvironmentalOpen in IMG/M
3300027533Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)EnvironmentalOpen in IMG/M
3300027695Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Rhizosphere soil Co-N PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027840Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)EnvironmentalOpen in IMG/M
3300027873Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031901Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2Host-AssociatedOpen in IMG/M
3300031965Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300034176Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17EnvironmentalOpen in IMG/M
3300034354Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17EnvironmentalOpen in IMG/M
3300034417Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
Iowa-Corn-GraphCirc_018748302140918013SoilMMSKAKRLAICFTFIITFAAAAQGQSLPKVRAAYTSIGIQFDPVYIMKELDLSRKHGVDA
F14TC_10147736813300000559SoilMLHVNRLLAGVVFIASFAAAAQAQSLPKVRAAYTSIGIQFDPVYIMKELDL
JGI11643J11755_1173112713300000787SoilMLRVKQLMIGFAWAVAFAPPAVGQSLPQVRAAYTSIGIQFDPVYIMKELELP
JGI10215J12807_143092723300000881SoilMSKAKRLAICFTFIITFAAAAQGQSLPKVRAAYTSIGIQFDPVYIMKELDLSRKHGVDAEILF
JGI11615J12901_1363080123300000953SoilMLSSKNWLICFALVLACAVPARGQSLPKARAAYTSIGIQFDPVYIMKELELPRK
JGI10216J12902_10460662423300000956SoilMFSIRSLLILLAGIIAFAAPVRGQSLPKARAAYTSIGIQFDPVYIMKELE
JGI10216J12902_10941974513300000956SoilMLRAKCWLILLTVIVAFAVPARGQSLPKVRAAYTSIGIQFDPVYIMKELDLPRKHGLDVE
Ga0055461_1020605013300003991Natural And Restored WetlandsMVKFKSLAIGFAFILICAVAAQGQSLPKVRAAYTSISIQFDPVYIMKELDLPRKYG
Ga0062590_10256731113300004157SoilMRLKSWVICLSIILFFSPKLHGQNLPKVRAAYTSIGIQFDPVYIMKELDLP
Ga0063356_10126427323300004463Arabidopsis Thaliana RhizosphereMSKAKRLAICFTFIITFAAAAQGQSLPKVRAAYTSIGIQFDPV
Ga0063356_10140116923300004463Arabidopsis Thaliana RhizosphereMPRAKRWVIGFSLILGFAAAAQGQSLPKVRAAYTSIGIQFDPV
Ga0063356_10236525923300004463Arabidopsis Thaliana RhizosphereMLTINRLVICFALIVGFAGVARGQSLPKVRGAYTSIGIQFDPVYIMKELDLPRRHGVDAEILFVPVSSRAVQAALAGEIQFI
Ga0063356_10276093313300004463Arabidopsis Thaliana RhizosphereMFGIRSLLILLAGIIAFAAPVRGQSLPKARAAYTSIGIQFDPVYIMKELELPRKHGLDVEVLFVPVS
Ga0062591_10087799113300004643SoilMKTKNWLICLTLVLLFSPKLQAQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVDVLFVPVSSR
Ga0066680_1044007113300005174SoilMLRLRLFTIVGLTAVTLTGVAHAQSLPKIRVAYTSIGIQFDPVYIMKELDLPRKYGVDAEILFVPVSSRAIQAAL
Ga0066684_1075716713300005179SoilMLRVKSLMICFAFIVAFAGAALGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRK
Ga0066676_1112928213300005186SoilMLRLRLFTIVGLTAVTLTGVAHAQSLPKIRVAYTSIGIQFDPVYIMKELDLPRKYGVDAEILFVPVSSRAIQAALAG
Ga0065705_1094399623300005294Switchgrass RhizosphereMLRVKKLALCFAFIITFTAVAQGQSLPKVRAAYTSIGIQFDPVYI
Ga0066388_10671820513300005332Tropical Forest SoilMLRVERYAIYFALIVVALADPTQAQSLPKVRAAYTSIGIQFDPFYIMKELDLPRKQGLDVETLFVPVSSRAVQAA
Ga0070660_10020113023300005339Corn RhizosphereMRLKQWVTCISLVLLFSAPLYGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVDVLFVP
Ga0070708_10090211013300005445Corn, Switchgrass And Miscanthus RhizosphereMLGVKRFGVWFAFILCSVGLAQGQNLPKVRAAYTSIGIQFDPVYIMKELDL
Ga0070704_10163596323300005549Corn, Switchgrass And Miscanthus RhizosphereMLRAKRFALCFAFIITFTAAAQGQSLPKVRAAYTSIGIQFD
Ga0066670_1082392613300005560SoilMLRLRKLVICFSVIVTFAAAAPGQNLPKVRAAYTSIGIQ
Ga0066905_10016380923300005713Tropical Forest SoilVLRVKRFAIYFALMVTALADPAHAQSLPKVRAAYTSIGIQFDPFYIMKELDLPRKQGLDVETLFVPVSSRAVQ
Ga0075432_1006300923300006058Populus RhizosphereMRIKDFMICVALVLLISPSVHGQSLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVDLLFV
Ga0082029_164315123300006169Termite NestMRFKKLMICAALVLFVSAGASGQTAPKVRAAYTSIGIQFDPVYIMKDLDLPRKYGLDVDMLFVP
Ga0075422_1051197713300006196Populus RhizosphereMSRVKRLVICLAFIVAFATAALGQSLPKVRAAYTSIGIQFDP
Ga0097621_10122219013300006237Miscanthus RhizosphereMQKSKSLCAVIAVILACAAPALGQTLPKVRAAYTSIGIQFDPVYIMKELDLPRKQGLDVDVLFVPVSSRA
Ga0075421_10140481813300006845Populus RhizosphereMRIKDFMICVALVLLISPSVHGQSLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVDLLFVPVSSRAIQAA
Ga0075430_10058046613300006846Populus RhizosphereMLSGKSLAIGLVLIVTFAAAALGQSLPKVRAAYTSIGIQFDPVYIMKELDLP
Ga0075430_10144769913300006846Populus RhizosphereMLRVKKLALCFAFIITFTAVAQGQSLPKVRAAYTSIGIQFDPVYIMKELELPRK
Ga0075431_10201416223300006847Populus RhizosphereMMSLKNFIICLVLMIVVAGNAAQAQSLPKVRAAYTSIGIQFDPFYIMKELDLPRKQGLDVETLFVPV
Ga0075433_1019266433300006852Populus RhizosphereMRIKDFMICVALVLLISPSVHGQSLPKVRAAYTSIGIQFDPVYIMKEL
Ga0075433_1128750813300006852Populus RhizosphereMRLKQWVTCISLVLLFSVPLYGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVDILF
Ga0075433_1145214723300006852Populus RhizosphereMLRVKRFAICFAVIVVASAGVTQAQSLPKVRAAYTSIGIQFDPVYITKELD
Ga0075433_1171643423300006852Populus RhizosphereMLRLRKLVICFSVIVTFAAAAQGQNLPKVRAAYTSIGIQFDPVYIMKELNLPRKYGL
Ga0075420_10117726313300006853Populus RhizosphereMMRLRKLVICFSVIVTFAAVAQGQNLPKVRAAYTSIGIQFD
Ga0075420_10175116823300006853Populus RhizosphereMSKAERLAICFTFIITFAAAAQGQSLPKVRAAYTSIGIQFDPVYIMKELDLSRKHGVDAEILFVPVSSRAVQAALA
Ga0075425_10047459213300006854Populus RhizosphereMLRVKRSAICLALIVVASARVAQAQSLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDAEILFVPV
Ga0068865_10211371823300006881Miscanthus RhizosphereMLRAKSLAICLAFIVTYTAVALGQSLPKVRAAYTSIGIQFDPVYIMKDLDLPRKYGVDAEILFVPVSSRAVQAALA
Ga0075419_1080003413300006969Populus RhizosphereMFRVKRFAICFAFVTVAFASAVQAQSLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDAEILFVPVSSRAVQA
Ga0079218_1117416213300007004Agricultural SoilMLSVKGLLIGFAFVIAFATAAVAQSLPKVRAAYTSIGIQFDPVYIMKELDLPRKHG
Ga0099828_1024822333300009089Vadose Zone SoilMLGVKRFGVWFAFILCSVGLAQGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGVAAEILFVPVSSRAVQA
Ga0102851_1067576723300009091Freshwater WetlandsMIMMLKILRWAICAAFMLVGSATAQAQTLPKVRAAYTSISIQFNPVYIMKELNL
Ga0066709_10002400913300009137Grasslands SoilMSRVKRLVICLASIVTFATAALGQSLPKVRAAYTSIGIQFDPVYIMKELDL
Ga0114129_1053212233300009147Populus RhizosphereMSRVKRLVICLASIVTFATAALGQSLPKVRAAYTSIGIQFDPVYIMKELDLSRK
Ga0114129_1056457533300009147Populus RhizosphereMLRVKRSAICLALIVVASAGVAQAQSLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDAEILFVPVSS
Ga0114129_1084554523300009147Populus RhizosphereMLRVKRFAICFAFIVVASAGVTQAQSLPKVRAAYTSIGIQFDPVYITKELDLPR
Ga0114129_1303178913300009147Populus RhizosphereMMRLRKLVICFSVIVTFAAVAQGQNLPKVRAAYTSIGIQFDPVYIMKELN
Ga0105242_1027351233300009176Miscanthus RhizosphereMSRWSPLREMMRLKSWVICLSIILFFSPKLHGQNLPKVRAAYTSIGIQFDPVYIMKEL
Ga0105252_1040903813300009678SoilMIMMLKILRWAICAAFMLVGSAAAQAQTLPKVRAAYTSISIQFTPVYIMKELNLAKKHGLDAEVVFVPVSSRAVQ
Ga0105076_105476713300009816Groundwater SandMMSFKNFAICLVLIITVAADAVQGQSLPKVRAAYTSIGIQFDPIY
Ga0105074_103433223300010029Groundwater SandMLRVKRFAICLALIVVAFADAAEAQSLPKVRAAYTS
Ga0126384_1193012113300010046Tropical Forest SoilMMSLKYFAVCLALIVMIAGDSAWAQGLPKVRAAYTSIGIQFDPFYIMKELDLPRKQGLDVETLFVP
Ga0126382_1099381423300010047Tropical Forest SoilMFMAKRFAILFVLIVVSADPAQAQSLPKVRAAYTSIGIQFDPFYIMKELDL
Ga0126373_1030521133300010048Tropical Forest SoilMIVNGRTTMFEVARVTLFFFLIVVSAGMARGQSLPKVRAAYTSIGIQFDPVYIMK
Ga0126370_1235625823300010358Tropical Forest SoilMLRVKRFAIYFALVVVAFADAARAQSLPKVRAAYTSIGIQFDPFYIMKELDLPR
Ga0134125_1272114923300010371Terrestrial SoilMGVALIVAFATPALGQSLPKVRAAYTSISIKFDAVYIMKEFNLSRKYGLDAEILFVPVSSRAVQAAL
Ga0126383_1250572413300010398Tropical Forest SoilMLRVKRFAIYFALVVVAFADAARAQSLPKVRAAYTSIGIQFDPFYIMKELDLPRKQG
Ga0134127_1009817713300010399Terrestrial SoilMSRWSPLREMMRLKSWVICLSIILFFNPKLHGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLD
Ga0134122_1000645313300010400Terrestrial SoilMMRLKSWVICLSIILFFSPKLHGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVDMLFVPVS
Ga0105246_1067353323300011119Miscanthus RhizosphereMRLKQWVTCISLVLLFSAPLYGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVDVLFVPVSSRAIQ
Ga0137340_102865513300011405SoilMLRVKIFAICFPIIVVAFAAAAQAQSLPKVRAAYTSIGIQFDPIYIMKERDLARKYGVDAEILFVP
Ga0137464_127465013300011434SoilMGGTMLSLRSWLICFAVVFVFAAPALTQSLPKARAAYTSIGIQFDPVYIMKELDLTRKYGLDVDMLFV
Ga0137432_113238113300011439SoilMLRVKRWVIGFSFIVAFATAAQGQSLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGV
Ga0137432_122948313300011439SoilMLRVKIFAICFAVIVVAFAAAAQAQSLPKVRAAYTSIGIQFDPIYIMKERDLARKYGVDAEILFVPVSSRA
Ga0137437_101255513300011442SoilMLKLKRLLIGLGTVIAFSGAAQGQSLPKVRAAYTSIGIQFDPVYIMKELDLARKHGVAAEILFVPVSSRAVQA
Ga0137427_1009792113300011445SoilMLRVKKLALCFAFIITFTAVAQGQSLPKVRAAYTSIGIQFDPVYIMKELELPRKYGVDAEILFVPVSSRAV*
Ga0137327_110848823300012173SoilMLKLKRLLIGLGCVVALADAAQSQTLPKVRAAYTSIGIQFDPVYIMKEL
Ga0137364_1146074713300012198Vadose Zone SoilMLRVKSLMICFAFIVAFAGAAQGQNLPKVRAAYTSIGIQFDPVYIMKELDLGHKYGLDVDML
Ga0137399_1056920213300012203Vadose Zone SoilMSRVKRFAICFAFIVVASAGVAQAQSLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLD
Ga0137399_1096412413300012203Vadose Zone SoilMSRVKRLVIGFALMVALADTAQGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVAVLF
Ga0137374_1026957033300012204Vadose Zone SoilMLSVKRIVICLAFIVAFAALASGQNLPKVRAAYTSIGIQFDPVYIMKELDLSRKYGV
Ga0137376_1003621663300012208Vadose Zone SoilMLRVKSLMICFAFIVAFAGAAQGQNLPKVRAAYTSIGIQFDPV
Ga0137372_1001589393300012350Vadose Zone SoilMLSVKRIVICLAFIVAFAALASGQNLPKVRAAYTSIGIQFDPVYIMKELDLSRKYGVDAEILFVPVSSR
Ga0137366_1038734313300012354Vadose Zone SoilMLSVKRIVICLAFIVAFAALASGQNLPKVRAAYTSIGIQFDPVYIMKELDLSRKYGVDAEILFVPV
Ga0137366_1091047323300012354Vadose Zone SoilMSRVKRLVICFAFIVAFAGAALGQSLPKVRAAYTSIGIQFDPVYIMKELDLSRKYGVDAEILFVPVSSRAVQA
Ga0137375_1012685933300012360Vadose Zone SoilMSRVKRLVICFAFIVAFAGAALGQSLPKVRAAYTSIGIQFDPVYIMKELDLSRKYGVDAEILFVPVSSRAVQAA
Ga0137375_1042783413300012360Vadose Zone SoilMSRVKRLVICLAFIVAFATAALALGQNLPKVRAAYTSIGIQFDPVYIMKELDLSRKHGVDAEILFV
Ga0157335_102103323300012492Arabidopsis RhizosphereMKTKNWLICLTLVLLFSPKLQAQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVDVLFVPVSSRA
Ga0137416_1117104913300012927Vadose Zone SoilMLRLRKLVICFSVIVTFAAAAPGQNLPKVRAAYTSIGIQFDPVYIM
Ga0164298_1100241413300012955SoilMLRLRKLVICFSVIVTVAAAAQGQNLPKVRAAYTSIGIQFDPVYIMK
Ga0126369_1344593823300012971Tropical Forest SoilMRGQKNPMMSLKYFAVCLALVVMIADDSAWAQGLPKVRAAYTSIGIQFDPFYIMKEL
Ga0164306_1084271313300012988SoilMRLKQWVTCISLVLLFSAPLYGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVDVLFVPVSSRAIQA
Ga0157371_1011994713300013102Corn RhizosphereMMRLKSWVICLSIILFFSPKLHGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVDMLFVPVSSRAIQA
Ga0157378_1288125423300013297Miscanthus RhizosphereVIRDGVTDNWGGTMLRIQRSLMGVALIVAVATPALGQSLPKVRAAYTSISIQFDAVYIMKELNLPRKYGLDAEILFVPVSSRAVQAAL
Ga0163162_1095766223300013306Switchgrass RhizosphereMSRWSPLREMMRLKSWVICLSIILFFSPKLHGQNLPKVRAAYTSIGIQFDPVYIMKELDL
Ga0163162_1268597323300013306Switchgrass RhizosphereMGVALIVAFATPALGQSLPKVRAAYTSIGIQFDPVYIMKELELPRKYGVDA
Ga0180062_101182413300014879SoilMLRVKIFAICFAVIVVAFAAAAQAQSLPKVRAAYTSIGIQFDPIYI
Ga0180062_110474013300014879SoilMLSVKSFAIGLTFILGLAGMAQGQNLPKVRAAYTSIGIQ
Ga0132257_10237090013300015373Arabidopsis RhizosphereMKTKNWLICLTLVLLFSPKLQAQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVDILFVPVSSRAIQAAL
Ga0132255_10393423913300015374Arabidopsis RhizosphereVIGFVLMVALAGAAQGQSLPKVRAAYTSIGIQFDPVYIMKELDLPRKQGLDVDVLFV
Ga0182036_1094367913300016270SoilMRSKQWITCMTLVLLFGAPLYAQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVDVLFV
Ga0182032_1104480213300016357SoilMLRLKRFSIWFTFVVAVSPGIAPAQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGL
Ga0187825_1000566173300017930Freshwater SedimentMSKKRTVAICFAFIVAITAAAQGQNLPKVRAAYTSIGIQ
Ga0187821_1016992413300017936Freshwater SedimentMSRIKTVAICFAFIVAITAAAQGQNLPKVRAAYTSIGIQFDPVYIMKELD
Ga0184634_1031104013300018031Groundwater SedimentMVRVKRFAICLALIVVAFVDAAQGQSLPKVRAAYTSIGIQFDPV
Ga0184621_1024561223300018054Groundwater SedimentLKLKRLVICFAFTLAFGTAALGQSLPKVRAAYTSIGIQFDP
Ga0184619_1012236913300018061Groundwater SedimentMLRVKGLVIGLAFIVAFAAAAQGQSLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVDVL
Ga0184637_1049287813300018063Groundwater SedimentMLRVKRLALCFAFIVAFTAAAQGQSLPKVRAAYTSIGIQFDPVYIMKELDLARKHGVDAEILFVPV
Ga0184611_113003323300018067Groundwater SedimentMSRVKRFAICLALIVVAFADAAQGQSLPKVRAAYTSIGIQFDPVYIMKEL
Ga0184609_1038145223300018076Groundwater SedimentMSRVKRFAICLALIVVAFVDAAQGQSLPKVRAAYTSIGIQFDPVY
Ga0184627_1035692613300018079Groundwater SedimentLRVKGLTISFAFIVAFAAAALGQSLPKVRAAYTSIGIQFDPVYIMKELDLSRKYGVDAEILFVPVSSRAVQ
Ga0184639_1050856323300018082Groundwater SedimentMFKVKRLVICFAFIVAFATAALGQSLPKVRAAYTSIGIQFDPVYIMKELDLSRKYGVD
Ga0190274_1047602613300018476SoilMFGIRSLLILLAGIIAFAAPVRGQSLPKARAAYTSIGIQFDPVYIMKELELPRKHGLDVEVLF
Ga0066669_1045497423300018482Grasslands SoilMLRLRLFTIVGLTAVTLTGVAHAQSLPKIRVAYTSIGIQFDPVYIMKELDLPRKYGVDAEILFVPVSSRAIQAALAGE
Ga0173479_1021181623300019362SoilMRLKSWVICLSIILFFSPKLHGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRK
Ga0207697_1014346023300025315Corn, Switchgrass And Miscanthus RhizosphereMSRWIPLREMMRLKSWVICLSIILFFSPKLHGQNLPKVRAAYTSIGIQFDPVYIMKELDL
Ga0210121_107047723300025555Natural And Restored WetlandsMVKFKSLATGFAFILICAVAAQGQSLPKVRAAYTSISIQFDPVYIMKELDLPRKYGLDTEILFVPVSSRAIQAA
Ga0207654_1017855523300025911Corn RhizosphereMSRWIPLREMMRLKSWVICLSIILFFNPKLHGQNLPKVRAAYTSIGIQFDPVYIMKEL
Ga0207660_1019266813300025917Corn RhizosphereMSRWSPLREMMRLKSWVICLSIILFFSPKLHGQNLPKVRAAYTSIGIQFDPVYIM
Ga0207662_1040546313300025918Switchgrass RhizosphereMRLKSWVICLSIILFFSPKLHGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVDMLFVPVSSRA
Ga0207657_1035862313300025919Corn RhizosphereMRLKQWVTCISLVLLFSAPLYGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYG
Ga0207659_1067316023300025926Miscanthus RhizosphereMRLKSWVICLSIILFFSPKLHGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVDM
Ga0207690_1033480123300025932Corn RhizosphereMSRWSPLREMMRLKSWVICLSIILFFSPKLHGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVDMLFV
Ga0210102_107752813300025971Natural And Restored WetlandsMSRAIRFAIWFGVLMIPVAGAAHGQGLPKVRAAYTSIGIQFDPIYIMKEFDLPRKYGLDV
Ga0209469_107886123300026307SoilLRLRLFTIVGLTAVTLTGVAHAQSLPKIRVAYTSIGIQFDPVYIMKELDLPRKYGVDAEILFVPVSSRAIQAALAGEI
Ga0208185_112594723300027533SoilMLSLRSWLICFAVVFVFAAPALTQSLPKARAAYTSIGIQFDPVYIMK
Ga0209966_102320013300027695Arabidopsis Thaliana RhizosphereMLRTNCLVICCAFIIGFTGAALGQSLPRVRAAYTSIGIQFDPVYIMKELELPRKHGVDAEILFVP
Ga0209683_1005262933300027840Wetland SedimentMLRAGSWLIGLAVGIAFAIPARAQSLPKVRAAYTSISIQFNPVYIMKELDLTRKYGLDVEVL
Ga0209683_1031030613300027840Wetland SedimentMLSVSSWLIGLALVVAFNAPARAQSLPKVRAAYTSISIQFNPVYIMKELD
Ga0209814_1025937623300027873Populus RhizosphereMLRVKRLVICFAVIVTFVAAAQGQNLPKVRAAYTSIGIQFDPVYIMKELDLSRKY
Ga0209974_1000633713300027876Arabidopsis Thaliana RhizosphereMLRTNCLVICCAFIIGFTGAALGQSLPRVRAAYTSIGIQFDPVYIMKELELPRKHG
Ga0207428_1122909213300027907Populus RhizosphereMRLKSWVICLSIILFFSPKLHGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDV
Ga0207428_1131184823300027907Populus RhizosphereMLRVKRSAICLALIVVASAGVAQAQSLPKVRAAYTSIGIQFDPVYIM
Ga0209382_1011635253300027909Populus RhizosphereMLRVKRSAICLALIVVAFADAARGQSLPKVRAAYTSIGIQ
(restricted) Ga0255311_109629813300031150Sandy SoilMSRVKSLVICFAFTLAFAAAALGQTLPKVRAAYTSIGIQFDPVYIMKELDLARKYGVDAEILFVPVSS
Ga0307408_10252477323300031548RhizosphereMLKVKGLLIGFAFVVTFAAEALGQSLPKIRAAYTSIGIQFDPVYIMKELELPRKHGVDAEILFVPVSSRA
Ga0307469_1113957513300031720Hardwood Forest SoilMMSLKNFIICLVLMIVVAGNAAQAQSLPKVRAAYTSIGIQFDPFYIMKELDLPRKQGLDVETLFVPVSSR
Ga0307406_1212023113300031901RhizosphereMLSIRSMVICFAVIIAFAAPVRGQSLPKARAAYTSIGIQFDPVYIMKELELPRKHGLDV
Ga0326597_1151065933300031965SoilMLRVKSLAICFSFIVAFAAPALGQNLPKVRAAYTSIGIQFDPVYIMKEIDLPRKYGVDAEILFVP
Ga0310906_1067664023300032013SoilMLRVKQLLIGFACVVAFAPAAVGQSLPKVRAAYTSIGIQFDPVYIMKELDLPRKHGVDAEILFVPVSSRAV
Ga0335077_1201584523300033158SoilMLRVKRFAIWFVFVVAVSTGIAQAQGLPKVRAAYTSIGIQFDPVYIMKELNLPRKYGLDVEMLFVPV
Ga0364931_0321028_386_5143300034176SedimentMLKLKRLLIGLGCVVAFADAAQGQSLPKVRAAYTSIGIQFDPV
Ga0364943_0037424_1456_15663300034354SedimentMVRVKRFAICFAIIVVAFADAAEGQSLPKVRAAYTSI
Ga0364941_030534_977_11443300034417SedimentMRLVIGFALMVALADAAQGQNLPKVRAAYTSIGIQFDPVYIMKELDLPRKYGLDVD
Ga0364941_043685_3_2333300034417SedimentMGGTMLSLRSWLICFAVVFVFAAPALTQSLPKARAAYTSIGIQFDPVYIMKELDLPRKHGLDVEVLFVPVSSRALQA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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