Metagenome / Metatranscriptome Family F056937

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F056937
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	47 residues
Representative Sequence	MQTQAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRN
Number of Associated Samples	107
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	98.54 %
% of genes near scaffold ends (potentially truncated)	93.43 %
% of genes from short scaffolds (< 2000 bps)	94.89 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.540 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (43.796 % of family members)
Environment Ontology (ENVO)	Unclassified (45.255 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.985 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.70% β-sheet: 13.70% Coil/Unstructured: 72.60%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF02687	FtsX	2.19
PF03572	Peptidase_S41	2.19
PF04956	TrbC	2.19
PF11799	IMS_C	1.46
PF01381	HTH_3	0.73
PF16793	RepB_primase	0.73
PF01068	DNA_ligase_A_M	0.73
PF03135	CagE_TrbE_VirB	0.73
PF01694	Rhomboid	0.73
PF13751	DDE_Tnp_1_6	0.73
PF13482	RNase_H_2	0.73
PF00126	HTH_1	0.73
PF03466	LysR_substrate	0.73
PF13683	rve_3	0.73
PF08423	Rad51	0.73
PF12705	PDDEXK_1	0.73
PF12704	MacB_PCD	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	2.19
COG3838	Type IV secretory pathway, VirB2 component (pilin)	Intracellular trafficking, secretion, and vesicular transport [U]	2.19
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	0.73
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.73
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.73
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.73
COG3451	Type IV secretory pathway, VirB4 component	Intracellular trafficking, secretion, and vesicular transport [U]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.54 %
Unclassified	root	N/A	1.46 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.54 %
Unclassified	root	N/A	1.46 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.54 %
Unclassified	root	N/A	1.46 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	78.83 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	10.95 %
Unclassified	root	N/A	1.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	71.53 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	10.95 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.92 %
Unclassified	root	N/A	1.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.53 %
Ktedonobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria	10.95 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.92 %
Unclassified	root	N/A	1.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.53 %
Ktedonobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales	10.95 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.92 %
Unclassified	root	N/A	1.46 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.53 %
Ktedonobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae	10.95 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.46 %
Unclassified	root	N/A	1.46 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.53 %
unclassified Ktedonobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae	10.95 %
Unclassified	root	N/A	1.46 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.73 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	71.53 %
Ktedonobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	10.95 %
Unclassified	root	N/A	1.46 %
Granulicella sp. dw_53	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. dw_53	0.73 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	0.73 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001137\|JGI12637J13337_1003504	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1302	Open in IMG/M
3300002907\|JGI25613J43889_10052100	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1144	Open in IMG/M
3300005167\|Ga0066672_10266024	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1107	Open in IMG/M
3300005175\|Ga0066673_10894159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300005177\|Ga0066690_10304918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1076	Open in IMG/M
3300005177\|Ga0066690_11054397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300005179\|Ga0066684_10429927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300005181\|Ga0066678_10854799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300005187\|Ga0066675_10075386	All Organisms → cellular organisms → Bacteria	2159	Open in IMG/M
3300005434\|Ga0070709_10964563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	677	Open in IMG/M
3300005450\|Ga0066682_10589328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300005537\|Ga0070730_10017839	All Organisms → cellular organisms → Bacteria	5586	Open in IMG/M
3300005537\|Ga0070730_10042475	All Organisms → cellular organisms → Bacteria	3340	Open in IMG/M
3300005540\|Ga0066697_10775924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300005559\|Ga0066700_11106933	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300005561\|Ga0066699_11070539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300005574\|Ga0066694_10500591	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300005586\|Ga0066691_10795217	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300006046\|Ga0066652_101299803	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300006052\|Ga0075029_100818631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	635	Open in IMG/M
3300006163\|Ga0070715_10269449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300006796\|Ga0066665_10198308	All Organisms → cellular organisms → Bacteria	1556	Open in IMG/M
3300006796\|Ga0066665_10409480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1119	Open in IMG/M
3300006796\|Ga0066665_10500144	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	996	Open in IMG/M
3300006797\|Ga0066659_10204943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1446	Open in IMG/M
3300006800\|Ga0066660_11088946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300006893\|Ga0073928_10005215	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	18406	Open in IMG/M
3300007265\|Ga0099794_10435174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300009012\|Ga0066710_103919689	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	557	Open in IMG/M
3300009012\|Ga0066710_104182489	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300009038\|Ga0099829_11268618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300009088\|Ga0099830_11358053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	591	Open in IMG/M
3300009090\|Ga0099827_10723411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	860	Open in IMG/M
3300009143\|Ga0099792_10204462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1125	Open in IMG/M
3300009629\|Ga0116119_1106635	All Organisms → cellular organisms → Bacteria → Acidobacteria	703	Open in IMG/M
3300009645\|Ga0116106_1103831	All Organisms → cellular organisms → Bacteria → Acidobacteria	918	Open in IMG/M
3300010304\|Ga0134088_10456121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300010337\|Ga0134062_10103925	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1222	Open in IMG/M
3300010341\|Ga0074045_10125842	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1756	Open in IMG/M
3300010358\|Ga0126370_11992490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300010361\|Ga0126378_11612718	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	737	Open in IMG/M
3300010376\|Ga0126381_102869498	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300010937\|Ga0137776_1736574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300011270\|Ga0137391_10241437	All Organisms → cellular organisms → Bacteria	1567	Open in IMG/M
3300012189\|Ga0137388_11421569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300012198\|Ga0137364_11018499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	625	Open in IMG/M
3300012200\|Ga0137382_11244598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300012200\|Ga0137382_11280762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300012201\|Ga0137365_10751289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	712	Open in IMG/M
3300012203\|Ga0137399_11294967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	613	Open in IMG/M
3300012203\|Ga0137399_11653278	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300012205\|Ga0137362_11030341	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300012205\|Ga0137362_11264788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623	Open in IMG/M
3300012206\|Ga0137380_10728294	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300012206\|Ga0137380_10848516	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. dw_53	787	Open in IMG/M
3300012208\|Ga0137376_10412810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1172	Open in IMG/M
3300012208\|Ga0137376_10522242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1030	Open in IMG/M
3300012208\|Ga0137376_10599715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	953	Open in IMG/M
3300012208\|Ga0137376_11095152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300012209\|Ga0137379_10557051	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1054	Open in IMG/M
3300012210\|Ga0137378_10470414	Not Available	1163	Open in IMG/M
3300012210\|Ga0137378_11749521	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300012285\|Ga0137370_10014867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3803	Open in IMG/M
3300012285\|Ga0137370_10711419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300012351\|Ga0137386_10176517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1532	Open in IMG/M
3300012357\|Ga0137384_10239230	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1516	Open in IMG/M
3300012359\|Ga0137385_10400331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1171	Open in IMG/M
3300012361\|Ga0137360_10630392	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	919	Open in IMG/M
3300012361\|Ga0137360_10776320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	824	Open in IMG/M
3300012361\|Ga0137360_10838423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	792	Open in IMG/M
3300012361\|Ga0137360_11650046	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300012362\|Ga0137361_10386457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1285	Open in IMG/M
3300012362\|Ga0137361_11157130	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300012683\|Ga0137398_10304409	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1072	Open in IMG/M
3300012917\|Ga0137395_10470291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	904	Open in IMG/M
3300012918\|Ga0137396_10193619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1493	Open in IMG/M
3300012918\|Ga0137396_10896408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	650	Open in IMG/M
3300012922\|Ga0137394_10331983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1298	Open in IMG/M
3300012922\|Ga0137394_11059531	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300012922\|Ga0137394_11183492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	628	Open in IMG/M
3300012923\|Ga0137359_10235735	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1633	Open in IMG/M
3300012923\|Ga0137359_10421390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1182	Open in IMG/M
3300012923\|Ga0137359_11759602	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	507	Open in IMG/M
3300012923\|Ga0137359_11774460	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	504	Open in IMG/M
3300012924\|Ga0137413_11140220	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300012925\|Ga0137419_10443339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1022	Open in IMG/M
3300012925\|Ga0137419_11099134	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	662	Open in IMG/M
3300012927\|Ga0137416_10760044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300012927\|Ga0137416_11299447	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	657	Open in IMG/M
3300012927\|Ga0137416_11514969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300012930\|Ga0137407_12383747	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300012975\|Ga0134110_10272097	All Organisms → cellular organisms → Bacteria	726	Open in IMG/M
3300012976\|Ga0134076_10277015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	721	Open in IMG/M
3300014150\|Ga0134081_10428804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300014152\|Ga0181533_1298270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300014155\|Ga0181524_10010644	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	7426	Open in IMG/M
3300015054\|Ga0137420_1151898	All Organisms → cellular organisms → Bacteria → Acidobacteria	749	Open in IMG/M
3300015241\|Ga0137418_10087492	All Organisms → cellular organisms → Bacteria → Proteobacteria	2817	Open in IMG/M
3300015241\|Ga0137418_10631954	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300015245\|Ga0137409_10776475	All Organisms → cellular organisms → Bacteria → Acidobacteria	793	Open in IMG/M
3300016270\|Ga0182036_11851324	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300018007\|Ga0187805_10396762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300018047\|Ga0187859_10854923	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300018482\|Ga0066669_11553057	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	603	Open in IMG/M
3300020579\|Ga0210407_10562869	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	889	Open in IMG/M
3300020580\|Ga0210403_11008571	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	651	Open in IMG/M
3300021088\|Ga0210404_10429080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	741	Open in IMG/M
3300021170\|Ga0210400_10304251	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1309	Open in IMG/M
3300021171\|Ga0210405_10617959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	843	Open in IMG/M
3300021171\|Ga0210405_10676680	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300021432\|Ga0210384_10486153	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1111	Open in IMG/M
3300021478\|Ga0210402_11779789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	542	Open in IMG/M
3300021479\|Ga0210410_11458117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300025439\|Ga0208323_1066052	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300025910\|Ga0207684_10479393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1067	Open in IMG/M
3300026551\|Ga0209648_10458930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	783	Open in IMG/M
3300026555\|Ga0179593_1024871	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1833	Open in IMG/M
3300027583\|Ga0209527_1046356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300027737\|Ga0209038_10189220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	623	Open in IMG/M
3300027903\|Ga0209488_10972305	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300028536\|Ga0137415_10488469	All Organisms → cellular organisms → Bacteria	1039	Open in IMG/M
3300029636\|Ga0222749_10171537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1069	Open in IMG/M
3300030813\|Ga0265750_1052650	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300031057\|Ga0170834_111763652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Ktedonobacteria → Ktedonobacterales → Ktedonobacteraceae → unclassified Ktedonobacteraceae → Ktedonobacteraceae bacterium	599	Open in IMG/M
3300031682\|Ga0318560_10699580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300031823\|Ga0307478_10922015	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300031879\|Ga0306919_10473846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	964	Open in IMG/M
3300031947\|Ga0310909_11131306	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	635	Open in IMG/M
3300031962\|Ga0307479_11944150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300032180\|Ga0307471_101195922	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	924	Open in IMG/M
3300032205\|Ga0307472_101644623	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	633	Open in IMG/M
3300032205\|Ga0307472_102536451	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300032261\|Ga0306920_101591708	All Organisms → cellular organisms → Bacteria	930	Open in IMG/M
3300032783\|Ga0335079_10849357	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300032892\|Ga0335081_11179270	All Organisms → cellular organisms → Bacteria → Acidobacteria	875	Open in IMG/M
3300033158\|Ga0335077_11128595	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	773	Open in IMG/M
3300033405\|Ga0326727_10397237	Not Available	1268	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.97%
Aquatic	Environmental → Aquatic	8.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	91.24%
Freshwater	Environmental → Aquatic → Freshwater	5.84%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.46%
Sediment	Environmental → Aquatic → Sediment	0.73%
Peat	Environmental → Terrestrial → Peat	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	83.94%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.84%
Loam	Environmental → Terrestrial → Soil → Loam	4.38%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.92%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	51.82%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	16.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.33%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.92%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.92%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.19%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.46%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.73%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.73%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.73%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.73%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.73%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	43.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	13.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.76%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.19%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.19%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.19%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.19%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.46%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.46%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.73%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.73%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.73%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.73%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.73%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.73%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.73%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.73%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.73%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.73%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.73%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001137	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3	Environmental	Open in IMG/M
3300002907	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005574	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_143	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009629	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_100	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014152	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_60_metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300025439	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_100 (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026555	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300027583	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027737	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12637J13337_10035041	3300001137	Forest Soil	MEVRAPKGQYRVIGLDSVDTLTWPSGPLWKDCETF
JGI25613J43889_100521002	3300002907	Grasslands Soil	MQKQAPKGQYRVIGLDPIDTLTSPSGPVWKDCETLEEARDLANRNGELYLWVFVC
Ga0066672_102660243	3300005167	Soil	MQTQAPRGQYRVMGLDPFDTLTWPSGPLWKDCETLDEARDFADR
Ga0066673_108941592	3300005175	Soil	MQTQAPNGQYRVIGLDPVDTLAWPSGPLLQDCETLNEALDLADHNRALYLWVYVYDDAGV
Ga0066690_103049181	3300005177	Soil	MQVQAPKGQYRVIGLDPIDALTGPCGPLWKDCETLGEARDVADRNSELYLWV*
Ga0066690_110543972	3300005177	Soil	MQVQAPKGQYRVIGLDPIDTLTSPSGPLWKDCETFQEARDLAD
Ga0066684_104299272	3300005179	Soil	MQTQAPKGQYRVIGLSPIDTLTWPSGMLCKNCETFDEARD*
Ga0066678_108547991	3300005181	Soil	MQVQAPKGQYRVIGLDHVNTLDSPTGPLSKDFESFDEARDLADRMSEEYVWIYVYDDAG
Ga0066675_100753865	3300005187	Soil	MQTQAPKGQYRVIGLSPIDTLTWPSGILCKDCETFDEARD*
Ga0070709_109645632	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDKALDL
Ga0066682_105893282	3300005450	Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDKALDLAASNDELY
Ga0070730_100178391	3300005537	Surface Soil	MEVRAPKGKYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAASND
Ga0070730_100424753	3300005537	Surface Soil	MQTRAPKGKYRVIGLDPIDTLTWPSGPLWKDCETLDEALAGC*
Ga0066697_107759241	3300005540	Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDKALDLAASNDELYLRIY
Ga0066700_111069332	3300005559	Soil	MQTQAPEGQYRVIGLDPVDTLTSPSGPLWKDCETFDEARDLADRN
Ga0066699_110705392	3300005561	Soil	QTKAPSGRYRVIGLDPIDTLTWPSGPLWKDCDTLDEARDLG*
Ga0066694_105005911	3300005574	Soil	MQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNGDS
Ga0066691_107952171	3300005586	Soil	MQKQAPKGQYRVIGLDPIDTLTSPSGPLWKDCETLEETRDMANRNGESYLWVYVYD
Ga0066652_1012998032	3300006046	Soil	MQTQAPRGQYRVLGLDPFDTLTWPSGPLCRDCKTLDEARDLADRNGELYLWVCVYDDAGEVL*
Ga0075029_1008186312	3300006052	Watersheds	MEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAASNDE
Ga0070715_102694493	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETLDGALDLAEHNRALYLWVYVYDDAGV
Ga0066665_101983083	3300006796	Soil	MQVQAPKGQYRVIGLDHDNTLDSPSGPLRKDFESFDEARDLADRMS
Ga0066665_104094801	3300006796	Soil	MQTQAPKGQYRVIGLDPVDSLTWPSGPLWKDCETFDKARDLADRNEESYAWVYVYDDGRQ
Ga0066665_105001441	3300006796	Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAASNDEL
Ga0066659_102049431	3300006797	Soil	MQTQAPKGQYRVIGLDPVDTLTWPSGPLWRDCETFDEARDLADSNEESYAWV
Ga0066660_110889462	3300006800	Soil	MQTRAPRGQYLVIGLDPIDTLTWPSGPLWKDCETLDEARDFADRNSDLYAWIYIYND
Ga0073928_100052151	3300006893	Iron-Sulfur Acid Spring	MEVRAPKGHYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAA
Ga0099794_104351741	3300007265	Vadose Zone Soil	MQKQAPKGQYRVIGLDPIDTLTSPSGPLWKDCETLEETRDMANRNGES
Ga0066710_1039196891	3300009012	Grasslands Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDKALDLAASNDELYLRIYI
Ga0066710_1041824891	3300009012	Grasslands Soil	MMQIQAPKGQYRVIGLDPVDTLSWPSGPLWKDCDSLD
Ga0099829_112686181	3300009038	Vadose Zone Soil	MEVRAPKGQYRIIGLDRVDTLTWPSGPLLKDCETFDKA
Ga0099830_113580532	3300009088	Vadose Zone Soil	MEVRASKGQYRVIGLDPVDTLTWPSGPLRKDCETFDK
Ga0099827_107234111	3300009090	Vadose Zone Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCQTLDEALDLAASNDELYLR
Ga0099792_102044623	3300009143	Vadose Zone Soil	MQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEAR
Ga0116119_11066352	3300009629	Peatland	MEVRAPKGQYRVIGLDPVDTLTWASGPLWKDCETFDE
Ga0116106_11038311	3300009645	Peatland	MEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCKTFEEALDLAASNDELYLRI
Ga0134088_104561211	3300010304	Grasslands Soil	MQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNGDSYAWLYVYDDAGE
Ga0134062_101039252	3300010337	Grasslands Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDKALDLAASNDELYLRIYI*
Ga0074045_101258421	3300010341	Bog Forest Soil	MEVRAPKGQYRLIGLDPVDTLTWASGPLWKDCETFDEALDLAASNDELYLRI
Ga0126370_119924901	3300010358	Tropical Forest Soil	LEVRAPRGQYRVIGLDPVDTLTSPSGPLWKDCETLDEALDLADRNNDLYLRIYIYD
Ga0126378_116127182	3300010361	Tropical Forest Soil	MRTQAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDFAGRNEGS
Ga0126381_1028694981	3300010376	Tropical Forest Soil	MEVCAPKGKYRVIGLDPVDTLTWPSGPLWKDCETFDEA
Ga0137776_17365741	3300010937	Sediment	MQTQAPKGQYRVIGLDPIDTLTWPSGPLWKDCETLDEALDLADRNRA
Ga0137391_102414373	3300011270	Vadose Zone Soil	MELRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAASND
Ga0137388_114215692	3300012189	Vadose Zone Soil	MQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFD
Ga0137364_110184991	3300012198	Vadose Zone Soil	MQVQAPKGQYRVIGLDPVDTLASPSGPLWKDCETFDEARDLADRNEALYFSVCVYDDAGELLYEAGRHAQ*
Ga0137382_112445981	3300012200	Vadose Zone Soil	MQVQAPKGQYRVIGLDHVNTLDSPTGPLSKDFESFNEARDLADRMSEEYVWIYVYDDAGDVLY
Ga0137382_112807621	3300012200	Vadose Zone Soil	MQAQAPKDQYRVIGLDPIDTLTWPSGPLWKDCETLE
Ga0137365_107512893	3300012201	Vadose Zone Soil	MQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETF
Ga0137399_112949671	3300012203	Vadose Zone Soil	MQVQAPKGQFRVIGLDPIDTLTSPSGPFSKDCETLEEAVELADRSGELYLWTYV
Ga0137399_116532781	3300012203	Vadose Zone Soil	MQTQAPKGQYRVIGLDPIDTLTWPSGPLWKDCETLDEALDLADHNRALY
Ga0137362_110303412	3300012205	Vadose Zone Soil	MEVRAPKGRYRVIGLDPVDTLTWPSGPLWKDCETFDEALDLAAS
Ga0137362_112647881	3300012205	Vadose Zone Soil	MQTRAPKGLYRVIGLDPIDTLTWPSGPLWKDCETLDEA
Ga0137380_107282941	3300012206	Vadose Zone Soil	MQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNGDSYAWLYVYD
Ga0137380_108485161	3300012206	Vadose Zone Soil	MQTQAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNGDSYAWLYVYD
Ga0137376_104128103	3300012208	Vadose Zone Soil	MQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDKARDLADRNEESYAWVYVYDDGRQAFVRGRLPRAAA*
Ga0137376_105222421	3300012208	Vadose Zone Soil	MLTQAPRGMYRVIGLAPIDTLTWPSGPLWKDCETLD
Ga0137376_105997151	3300012208	Vadose Zone Soil	MQVQAPKGQFRVIGLDPIDTLTSPSGPFSKDCETLEEALELADRSGELY
Ga0137376_110951521	3300012208	Vadose Zone Soil	MQTRAPRGQYRVIGLSPTDTLTWPSGPLWKDCETLDQARDLADRNGDLY
Ga0137379_105570512	3300012209	Vadose Zone Soil	MQTQAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFD
Ga0137378_104704143	3300012210	Vadose Zone Soil	MQTQAPESQYRVIGLDPVDTLTWPSGPLWKDCETF
Ga0137378_117495211	3300012210	Vadose Zone Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDKALDLAARN
Ga0137370_100148671	3300012285	Vadose Zone Soil	MQVQAPKGQYRVIGLDPVDTLASPSGPLWKDCEMFDEARDLADRNEALYFSVCVYDDAGELLYEAGRHAQ*
Ga0137370_107114191	3300012285	Vadose Zone Soil	MQVEAPKGQYRVIGLDPIDTLTWPSGPLWKDCETLEE
Ga0137386_101765173	3300012351	Vadose Zone Soil	MLTQAPRGMYRVIGLAPIDTLTWPSGPLWKDCETLDE
Ga0137384_102392301	3300012357	Vadose Zone Soil	MQTQAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRN
Ga0137385_104003313	3300012359	Vadose Zone Soil	MEVCAPKGRYRVIGLDAVDTLTWPSGPLWKDCETFD
Ga0137360_106303923	3300012361	Vadose Zone Soil	MQTQAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARD
Ga0137360_107763202	3300012361	Vadose Zone Soil	MQTQAPKGQYRVIGLDPVDTLAWPSGPLWKDCETLDEALDLAD
Ga0137360_108384231	3300012361	Vadose Zone Soil	MQTQAPTGQYRVIGLDPIDTLTSPSGPLWKDCETFDEARDLADSNGESYL
Ga0137360_116500461	3300012361	Vadose Zone Soil	MQTQAPEGQYRVIGLDPVDTLTWPSAPLWKDCETFDEARDLADRNEESYAWVYVYDDAGK
Ga0137361_103864571	3300012362	Vadose Zone Soil	MQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNEESYAWVYVYDDA
Ga0137361_111571302	3300012362	Vadose Zone Soil	MQVQAPKGQYRVIGLDHVNTLDSPSGPLRQDFDSFEEARDLADR
Ga0137398_103044093	3300012683	Vadose Zone Soil	MQTQAPKGQYRVIGLDPVDILTWPSGPLWKDCETFDEARDLADRNEESYAWVYI
Ga0137395_104702912	3300012917	Vadose Zone Soil	MRVHAPKGQYRVIGLDHIDTLESPSGPLSKDFETFEEARDLADRMTQEFLWT
Ga0137396_101936191	3300012918	Vadose Zone Soil	MQVQAPKGQYRVIGLDPVDSLSLRSGPLWKDCDSLDEARDFA
Ga0137396_108964081	3300012918	Vadose Zone Soil	MEVHAPKGQYRVIGLEPVDTRAWPSGPLWKDCETFDKALELAASNDELYL
Ga0137394_103319831	3300012922	Vadose Zone Soil	MQTQAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNEESYAWVYV
Ga0137394_110595311	3300012922	Vadose Zone Soil	MQVQAPKGQYRVIGLDHVDTLESPSGPLSKDFESFDEARDLADRMTEEYLWTYVYDDAGELLY
Ga0137394_111834921	3300012922	Vadose Zone Soil	MELRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETF
Ga0137359_102357351	3300012923	Vadose Zone Soil	MEVQAPKGQYRVIGLDPIDTLTWPSGPLCKDCETFDKALDLAASND
Ga0137359_104213901	3300012923	Vadose Zone Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDKALDLAASND
Ga0137359_117596021	3300012923	Vadose Zone Soil	MQVQAPKGQFRVIGLDPIDTLTSPSGPFSKDCETLEEAVELADRSGE
Ga0137359_117744601	3300012923	Vadose Zone Soil	MQVHAPKGQFRVIGLDPIDTLTSPSGPFSKDCETLEEAVELADRSGE
Ga0137413_111402202	3300012924	Vadose Zone Soil	MQVHAPKGQYRVIGLDHIDTLDSPSGPLSKDFESLDEARDLADRMTEEYLWTYVYDDAGR
Ga0137419_104433392	3300012925	Vadose Zone Soil	MQVQAPKGQYRVIGLDHVNTLDSPTGPLSKDFESFDE
Ga0137419_110991342	3300012925	Vadose Zone Soil	MQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCESFDEARDLADRNEELYAWVYVYDDAGKLLYEGGCHA
Ga0137416_107600443	3300012927	Vadose Zone Soil	MQTQAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLA
Ga0137416_112994472	3300012927	Vadose Zone Soil	MEVRAPKGQYRVIGLDPVDTLTSPSGPLWKDCETFDEALDL
Ga0137416_115149691	3300012927	Vadose Zone Soil	MEVRAPKGQYRVIGLDPVDTLAWPSGPLRKDCETFDKALDLAASNDELY
Ga0137407_123837471	3300012930	Vadose Zone Soil	MQKQAPKGQYRVIGLDPIDTLTSPSGPLWKDCETLEEARDMANRNGESYLWVYVYD
Ga0134110_102720972	3300012975	Grasslands Soil	MQVQAPKGQYRVIALDHIDTLESPSGPLSKDFESFEEARYLADRMTEEYIWTYVYDDA
Ga0134076_102770152	3300012976	Grasslands Soil	MQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNEESY
Ga0134081_104288042	3300014150	Grasslands Soil	MQTQAPKGQYRVIGLDPVDTLAWPGGPLWKDCETLDEALDLADHNRALY
Ga0181533_12982702	3300014152	Bog	MEVRAPKGQYRLIGLDPVDTLTSPSGPLWKDCETFDE
Ga0181524_100106441	3300014155	Bog	MEVRAPKGQYRLIGLDPVDTLTSPSGPRWKDCETFDEALDLAASNDELYLRIYIYNDN
Ga0137420_11518981	3300015054	Vadose Zone Soil	MEVRAPKGQYRQYRVIGLDPVDTLTWPSGPLSKDCE
Ga0137418_100874925	3300015241	Vadose Zone Soil	MQTQAPKGQYRVIGLDPVDTLGWSSGPLLQDCETLDEALDLADHNRALHLWVYVY
Ga0137418_106319542	3300015241	Vadose Zone Soil	MQTQAPKGQYRVIGLDPIDTLTSPSGPLWKDCETLDEARDFADRNG
Ga0137409_107764752	3300015245	Vadose Zone Soil	MEVRAPKGQYRVIGLDPVDPLTWPSGPLWKDCETF
Ga0182036_118513241	3300016270	Soil	MKTQAPKGQYRVIGLDPIDTLTWPSGPLWKDCETFDEARDLADRNGELYL
Ga0187805_103967621	3300018007	Freshwater Sediment	MQKQAPKGQYRVIGLDPIDTLTSPSGPLWKDCETLDGALDLADHNR
Ga0187859_108549232	3300018047	Peatland	MEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCKTFEEALDL
Ga0066669_115530571	3300018482	Grasslands Soil	MQVQAPKGQYRVIGLDPVDTLTWPSGPLCQDRETFEEARDLAERN
Ga0210407_105628691	3300020579	Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAASNDYLYL
Ga0210403_110085712	3300020580	Soil	MQTKAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNEESYAWVYVYDDA
Ga0210404_104290802	3300021088	Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAASN
Ga0210400_103042511	3300021170	Soil	MQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFN
Ga0210405_106179592	3300021171	Soil	MEVRAPKGQYWVVGLDPVDTLTWPSGPLWKDCGTFDEAL
Ga0210405_106766801	3300021171	Soil	MQFHAPKGQYRVIGLDHINTLDSPSGPLCKDLERFDEARDLADRMTEEYLWTYVY
Ga0210384_104861533	3300021432	Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDEALDLAASNDELYL
Ga0210402_117797891	3300021478	Soil	MQVQAPKGQYRVIGLDPIDTLTWPSGPLWKDCETLEEALEFADSNGESYLWIYVY
Ga0210410_114581172	3300021479	Soil	MEVCAPKGQYRVIGLDPVDTLAWPSGPLWKDCETLDEALDLA
Ga0208323_10660522	3300025439	Peatland	MEVRAPKGQYRVIGLDPVDTLTWASGPLWKDCETFDEALDLAASNDE
Ga0207684_104793931	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNEESYA
Ga0209648_104589302	3300026551	Grasslands Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAA
Ga0179593_10248714	3300026555	Vadose Zone Soil	MHVQAPKGQFRVIGLDPIDTLTSPSGPFSQDCETLEE
Ga0209527_10463563	3300027583	Forest Soil	MQTRAPKGQYRVIGLDPVDTLAWPSGPLSKDCETLDEALDLADRNRAFYLWLYVYDDAGVLLHETG
Ga0209038_101892201	3300027737	Bog Forest Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEAL
Ga0209488_109723052	3300027903	Vadose Zone Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDK
Ga0137415_104884693	3300028536	Vadose Zone Soil	MQTQAPKGQYRVIGLDPIDTLTSPSGPLWKDCETFDEARDFADRNGESYLW
Ga0222749_101715371	3300029636	Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFD
Ga0265750_10526501	3300030813	Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDKALDLAASNDELYLW
Ga0170834_1117636522	3300031057	Forest Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLRKDCETFDK
Ga0318560_106995801	3300031682	Soil	MEVCAPKGKYRVIGLDPVDTLTWPSGPLWKDCETF
Ga0307478_109220151	3300031823	Hardwood Forest Soil	MEVRAPKGQYRVIGLDPVDTLTWPGGPLWKDCETFDEALDLAAS
Ga0306919_104738462	3300031879	Soil	MDVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETFDEALEVAATNDE
Ga0310909_111313061	3300031947	Soil	MEVCAPRGKYRVIGLDPVDTLTWPSGPLWKDCETFDEALDFAASNDESYLHIYIY
Ga0307479_119441501	3300031962	Hardwood Forest Soil	MQTQAPKGQYRVIGLDPVDTLAWPSGPLWKDCETLDDAL
Ga0307471_1011959223	3300032180	Hardwood Forest Soil	MQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFDEARDLADRNEESYAWVYVYDD
Ga0307472_1016446231	3300032205	Hardwood Forest Soil	MEVRAPKGQFRVIGLDPVDTLTWPSGPLWKDCETFDKA
Ga0307472_1025364511	3300032205	Hardwood Forest Soil	MEVRAPKGQYRVIGLDPVDTLTWPSGPLWKDCETF
Ga0306920_1015917082	3300032261	Soil	MEVRAAKGQYRVIGLDPVDTLAWPNGPLCKDCETFDEAL
Ga0335079_108493573	3300032783	Soil	MQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCDTFDEARDLADRNEESYAWVYVYDDA
Ga0335081_111792702	3300032892	Soil	MQTRAPKGQYRVIGLDPIDTLTWPSGPLWKDCETLD
Ga0335077_111285952	3300033158	Soil	MQTQAPEGQYRVIGLDPVDTLTWPSGPLWKDCETFEEARDLADRNEESYAWVYVYDDAGKLLY
Ga0326727_103972372	3300033405	Peat Soil	MEVRAPKGQYRVIGLDPVDTLTSPSGPLWKDCGTFDEALDLAASNDELYLRIYIY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056937

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences