Metagenome Family F056948

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F056948
Family Type	Metagenome
Number of Sequences	137
Average Sequence Length	43 residues
Representative Sequence	VTAADLLVLAPWLIFGAALAVICYRLLARRRASRRHRRDGR
Number of Associated Samples	102
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	69.85 %
% of genes near scaffold ends (potentially truncated)	24.09 %
% of genes from short scaffolds (< 2000 bps)	81.02 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.394 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (13.139 % of family members)
Environment Ontology (ENVO)	Unclassified (21.168 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.336 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.17% β-sheet: 0.00% Coil/Unstructured: 47.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF03741	TerC	27.01
PF04075	F420H2_quin_red	8.03
PF09335	SNARE_assoc	2.92
PF08327	AHSA1	2.19
PF13631	Cytochrom_B_N_2	2.19
PF12698	ABC2_membrane_3	2.19
PF00096	zf-C2H2	1.46
PF01161	PBP	1.46
PF00037	Fer4	1.46
PF12840	HTH_20	1.46
PF00072	Response_reg	0.73
PF13191	AAA_16	0.73
PF00496	SBP_bac_5	0.73
PF00534	Glycos_transf_1	0.73
PF00583	Acetyltransf_1	0.73
PF12680	SnoaL_2	0.73
PF01156	IU_nuc_hydro	0.73
PF00486	Trans_reg_C	0.73
PF13826	DUF4188	0.73
PF00115	COX1	0.73
PF01906	YbjQ_1	0.73
PF00005	ABC_tran	0.73
PF13344	Hydrolase_6	0.73
PF00248	Aldo_ket_red	0.73
PF01061	ABC2_membrane	0.73
PF13546	DDE_5	0.73
PF13683	rve_3	0.73
PF09339	HTH_IclR	0.73
PF00291	PALP	0.73
PF02416	TatA_B_E	0.73
PF13411	MerR_1	0.73

COG ID	Name	Functional Category	% Frequency in 137 Family Scaffolds
COG0861	Tellurite resistance membrane protein TerC	Inorganic ion transport and metabolism [P]	27.01
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	2.92
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	2.92
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	2.92
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	1.46
COG0393	Uncharacterized pentameric protein YbjQ, UPF0145 family	Function unknown [S]	0.73
COG1826	Twin-arginine protein secretion pathway components TatA and TatB	Intracellular trafficking, secretion, and vesicular transport [U]	0.73
COG1957	Inosine-uridine nucleoside N-ribohydrolase	Nucleotide transport and metabolism [F]	0.73

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
All Organisms	root	All Organisms	41.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
cellular organisms	root	All Organisms → cellular organisms	41.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.88 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.96 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.73 %
Sar	clade	All Organisms → cellular organisms → Eukaryota → Sar	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	36.50 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.46 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.73 %
Alveolata	clade	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22.63 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	2.19 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.46 %
Dinophyceae	class	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae	0.73 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	2.19 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	2.19 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	1.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.46 %
unclassified Chromatiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales	0.73 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.73 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.73 %
Suessiales	order	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	2.19 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	2.19 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.46 %
Chromatiales bacterium 21-64-14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium 21-64-14	0.73 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.73 %
Symbiodiniaceae	family	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae	0.73 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	2.19 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.46 %
Symbiodinium	genus	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium	0.73 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.73 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.73 %
Chromatiales bacterium 21-64-14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium 21-64-14	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	2.19 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.46 %
unclassified Symbiodinium	no rank	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium	0.73 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.73 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.73 %
Chromatiales bacterium 21-64-14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium 21-64-14	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.39 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	2.19 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.46 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1.46 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.46 %
Symbiodinium sp. KB8	species	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	0.73 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.73 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.73 %
Chromatiales bacterium 21-64-14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium 21-64-14	0.73 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.73 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_101742572	Not Available	745	Open in IMG/M
3300004479\|Ga0062595_100592675	Not Available	861	Open in IMG/M
3300005093\|Ga0062594_102402958	Not Available	576	Open in IMG/M
3300005172\|Ga0066683_10215678	Not Available	1186	Open in IMG/M
3300005332\|Ga0066388_101106315	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1342	Open in IMG/M
3300005332\|Ga0066388_104702426	Not Available	695	Open in IMG/M
3300005336\|Ga0070680_101323868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300005434\|Ga0070709_10001065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	15156	Open in IMG/M
3300005434\|Ga0070709_10319807	Not Available	1138	Open in IMG/M
3300005434\|Ga0070709_11221655	Not Available	604	Open in IMG/M
3300005435\|Ga0070714_100022200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5202	Open in IMG/M
3300005435\|Ga0070714_100237090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium 21-64-14	1683	Open in IMG/M
3300005437\|Ga0070710_10186687	Not Available	1301	Open in IMG/M
3300005440\|Ga0070705_100604780	Not Available	849	Open in IMG/M
3300005450\|Ga0066682_10978010	Not Available	500	Open in IMG/M
3300005467\|Ga0070706_100273164	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300005468\|Ga0070707_100664612	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1005	Open in IMG/M
3300005540\|Ga0066697_10351615	Not Available	858	Open in IMG/M
3300005548\|Ga0070665_102313717	Not Available	540	Open in IMG/M
3300005563\|Ga0068855_101591582	All Organisms → cellular organisms → Eukaryota → Sar → Alveolata → Dinophyceae → Suessiales → Symbiodiniaceae → Symbiodinium → unclassified Symbiodinium → Symbiodinium sp. KB8	669	Open in IMG/M
3300005598\|Ga0066706_10459194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1015	Open in IMG/M
3300005617\|Ga0068859_102005807	Not Available	639	Open in IMG/M
3300005719\|Ga0068861_102360956	Not Available	534	Open in IMG/M
3300005764\|Ga0066903_100726852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1757	Open in IMG/M
3300005764\|Ga0066903_102604503	Not Available	980	Open in IMG/M
3300005764\|Ga0066903_104680923	Not Available	728	Open in IMG/M
3300005764\|Ga0066903_106776968	Not Available	595	Open in IMG/M
3300006028\|Ga0070717_10417360	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1207	Open in IMG/M
3300006058\|Ga0075432_10286791	Not Available	679	Open in IMG/M
3300006059\|Ga0075017_100069746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2397	Open in IMG/M
3300006163\|Ga0070715_10051142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1777	Open in IMG/M
3300006173\|Ga0070716_101341395	Not Available	579	Open in IMG/M
3300006174\|Ga0075014_100148198	Not Available	1144	Open in IMG/M
3300006845\|Ga0075421_100860632	Not Available	1038	Open in IMG/M
3300006854\|Ga0075425_100036843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5446	Open in IMG/M
3300006854\|Ga0075425_100563724	Not Available	1311	Open in IMG/M
3300006854\|Ga0075425_102154505	Not Available	622	Open in IMG/M
3300006871\|Ga0075434_100238517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1838	Open in IMG/M
3300006914\|Ga0075436_100075824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2328	Open in IMG/M
3300009012\|Ga0066710_103438551	Not Available	600	Open in IMG/M
3300009137\|Ga0066709_100275167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2271	Open in IMG/M
3300009174\|Ga0105241_10614029	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	984	Open in IMG/M
3300010043\|Ga0126380_10305869	Not Available	1134	Open in IMG/M
3300010046\|Ga0126384_10245619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1444	Open in IMG/M
3300010047\|Ga0126382_10005957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5526	Open in IMG/M
3300010047\|Ga0126382_10030026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2968	Open in IMG/M
3300010048\|Ga0126373_10382411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1428	Open in IMG/M
3300010360\|Ga0126372_10261120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1494	Open in IMG/M
3300010360\|Ga0126372_10359516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1310	Open in IMG/M
3300010360\|Ga0126372_10637299	Not Available	1029	Open in IMG/M
3300010360\|Ga0126372_12885404	Not Available	533	Open in IMG/M
3300010361\|Ga0126378_10004670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10503	Open in IMG/M
3300010361\|Ga0126378_10821700	Not Available	1038	Open in IMG/M
3300010398\|Ga0126383_10321843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1555	Open in IMG/M
3300010400\|Ga0134122_11734186	Not Available	654	Open in IMG/M
3300012198\|Ga0137364_10084162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	2206	Open in IMG/M
3300012199\|Ga0137383_10545426	Not Available	849	Open in IMG/M
3300012201\|Ga0137365_10026794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4448	Open in IMG/M
3300012201\|Ga0137365_10417821	Not Available	989	Open in IMG/M
3300012211\|Ga0137377_10007525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8902	Open in IMG/M
3300012285\|Ga0137370_10278076	Not Available	996	Open in IMG/M
3300012356\|Ga0137371_10042298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3518	Open in IMG/M
3300012356\|Ga0137371_10150051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1827	Open in IMG/M
3300012356\|Ga0137371_10225399	Not Available	1465	Open in IMG/M
3300012356\|Ga0137371_10302638	Not Available	1245	Open in IMG/M
3300012929\|Ga0137404_11876548	Not Available	558	Open in IMG/M
3300012960\|Ga0164301_11057058	Not Available	642	Open in IMG/M
3300012971\|Ga0126369_10237707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1784	Open in IMG/M
3300012971\|Ga0126369_11150328	Not Available	865	Open in IMG/M
3300012984\|Ga0164309_11159115	Not Available	646	Open in IMG/M
3300015372\|Ga0132256_103319967	Not Available	541	Open in IMG/M
3300015373\|Ga0132257_101150274	Not Available	981	Open in IMG/M
3300016357\|Ga0182032_10098467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2058	Open in IMG/M
3300016404\|Ga0182037_11267732	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300016445\|Ga0182038_11726175	Not Available	564	Open in IMG/M
3300017654\|Ga0134069_1330386	Not Available	546	Open in IMG/M
3300017947\|Ga0187785_10532452	Not Available	591	Open in IMG/M
3300017959\|Ga0187779_10048075	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2485	Open in IMG/M
3300017959\|Ga0187779_10111031	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	1660	Open in IMG/M
3300017959\|Ga0187779_10757723	Not Available	660	Open in IMG/M
3300017973\|Ga0187780_10396039	Not Available	979	Open in IMG/M
3300017974\|Ga0187777_10124713	Not Available	1707	Open in IMG/M
3300017999\|Ga0187767_10058834	Not Available	974	Open in IMG/M
3300017999\|Ga0187767_10085516	Not Available	851	Open in IMG/M
3300018058\|Ga0187766_10141935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1486	Open in IMG/M
3300018058\|Ga0187766_10550385	Not Available	782	Open in IMG/M
3300018060\|Ga0187765_10005016	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5592	Open in IMG/M
3300018060\|Ga0187765_10014480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3636	Open in IMG/M
3300021560\|Ga0126371_10669014	Not Available	1187	Open in IMG/M
3300021560\|Ga0126371_11611472	Not Available	775	Open in IMG/M
3300021560\|Ga0126371_11707770	Not Available	753	Open in IMG/M
3300021560\|Ga0126371_12062721	Not Available	687	Open in IMG/M
3300022756\|Ga0222622_11091765	Not Available	587	Open in IMG/M
3300025898\|Ga0207692_10106029	Not Available	1551	Open in IMG/M
3300025915\|Ga0207693_10123691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	2032	Open in IMG/M
3300025917\|Ga0207660_11413151	Not Available	564	Open in IMG/M
3300025917\|Ga0207660_11734807	Not Available	502	Open in IMG/M
3300025922\|Ga0207646_10063484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3297	Open in IMG/M
3300025929\|Ga0207664_10533442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1052	Open in IMG/M
3300025939\|Ga0207665_10433924	Not Available	1006	Open in IMG/M
3300026088\|Ga0207641_10733134	Not Available	975	Open in IMG/M
3300026295\|Ga0209234_1075666	Not Available	1278	Open in IMG/M
3300026551\|Ga0209648_10615818	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	596	Open in IMG/M
3300027646\|Ga0209466_1012899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1763	Open in IMG/M
3300027874\|Ga0209465_10375235	Not Available	712	Open in IMG/M
3300027907\|Ga0207428_10090161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2382	Open in IMG/M
3300028787\|Ga0307323_10050982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1459	Open in IMG/M
3300031544\|Ga0318534_10123510	Not Available	1488	Open in IMG/M
3300031546\|Ga0318538_10150894	Not Available	1228	Open in IMG/M
3300031564\|Ga0318573_10194581	Not Available	1074	Open in IMG/M
3300031640\|Ga0318555_10090638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1602	Open in IMG/M
3300031668\|Ga0318542_10047778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1932	Open in IMG/M
3300031668\|Ga0318542_10079241	Not Available	1553	Open in IMG/M
3300031770\|Ga0318521_10371963	Not Available	849	Open in IMG/M
3300031795\|Ga0318557_10369818	Not Available	659	Open in IMG/M
3300031797\|Ga0318550_10306365	Not Available	771	Open in IMG/M
3300031819\|Ga0318568_10049891	Not Available	2410	Open in IMG/M
3300031835\|Ga0318517_10530520	Not Available	530	Open in IMG/M
3300031896\|Ga0318551_10217075	Not Available	1062	Open in IMG/M
3300031945\|Ga0310913_10267221	Not Available	1204	Open in IMG/M
3300032076\|Ga0306924_10550759	Not Available	1309	Open in IMG/M
3300032174\|Ga0307470_10606704	Not Available	819	Open in IMG/M
3300032205\|Ga0307472_100362653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1195	Open in IMG/M
3300032205\|Ga0307472_102034453	Not Available	576	Open in IMG/M
3300032783\|Ga0335079_10003326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	18581	Open in IMG/M
3300032783\|Ga0335079_10003417	All Organisms → cellular organisms → Bacteria	18364	Open in IMG/M
3300032783\|Ga0335079_11150512	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	783	Open in IMG/M
3300032783\|Ga0335079_11352086	Not Available	709	Open in IMG/M
3300032805\|Ga0335078_10050213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6168	Open in IMG/M
3300032805\|Ga0335078_10378679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1867	Open in IMG/M
3300032805\|Ga0335078_10705967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1248	Open in IMG/M
3300032892\|Ga0335081_10941808	Not Available	1013	Open in IMG/M
3300032898\|Ga0335072_10387237	All Organisms → cellular organisms → Bacteria	1508	Open in IMG/M
3300032955\|Ga0335076_10004357	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14317	Open in IMG/M
3300033290\|Ga0318519_10294050	Not Available	949	Open in IMG/M
3300033808\|Ga0314867_143024	Not Available	560	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.32%
Host-Associated	Host-Associated	11.68%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.13%
Plants	Host-Associated → Plants	11.68%
Aquatic	Environmental → Aquatic	2.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.03%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.65%
Sediment	Environmental → Aquatic → Sediment	2.19%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.18%
Loam	Environmental → Terrestrial → Soil → Loam	21.17%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.57%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.82%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	16.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.33%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	15.33%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.92%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.19%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	13.14%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	10.95%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.22%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.76%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.03%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	7.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.84%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	5.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.65%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.92%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.19%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.19%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	2.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.19%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.46%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.73%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.73%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.73%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.73%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.73%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.73%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.73%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033808	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1017425721	3300000364	Soil	VVAITANLLVLAPWIIFGAGLAVICYRLLRRRAFTRRHRRDDR*
Ga0062595_1005926752	3300004479	Soil	VVAITANLLVLAPWLLFGAGLAVICYRLLRRRAFTRRHRRDDR*
Ga0062594_1024029583	3300005093	Soil	MEADVTAADLLVLAPWLIFGAAVAVICYRLLTRRGASRRNRRDGR*
Ga0066683_102156782	3300005172	Soil	VSGANLLVLAPWLIFGACVVAIGYRLLSRRGPDRRRRRDHR*
Ga0066388_1011063151	3300005332	Tropical Forest Soil	MEAEVTVADLLVLAPWVIFGAALAVICYRLLRRCGPSHRHQRGSR*
Ga0066388_1047024262	3300005332	Tropical Forest Soil	VTAANLLVLAPWLIFGAGLAVICYRLLARRGTCHRHRRDSR*
Ga0070680_1013238681	3300005336	Corn Rhizosphere	VVAITANLLVLAPWLIFGAGLAVICYRLLSRRASSHRHRRDDR*
Ga0070709_1000106518	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADLLVLAPWVIFGAALAVICYRLLARRRASRRHRRDGR*
Ga0070709_103198072	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADLLVLAPWLIFGAALAAICYRLLVRRRASRRHHRDGR*
Ga0070709_112216551	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADLLVLAPWLIFGAALAVICYRLLARRRASRRHRRDGR*
Ga0070714_1000222001	3300005435	Agricultural Soil	VTAADLLVLAPWLIFGAALAAICYRLLARRRASRRHHRDGR*
Ga0070714_1002370905	3300005435	Agricultural Soil	VTAADLLVLAPWLIFGAALAVICYRLLTRRRASRRHRRGGQ*
Ga0070710_101866871	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	GGVTAADLLVLAPWLIFGAALAAICYRLLARRRASRRHHRDGR*
Ga0070701_105266772	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	RHEHRQPRTAAMTGGDLVVLAPWVIFGACLAVICIRLLAWRRASRRHRR*
Ga0070705_1006047801	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADLLVLAPWLIFGVALGVICYRLFARRRASRRHRDSR*
Ga0066682_109780101	3300005450	Soil	GVTAADLLVLAPWLIFGACVVAIGYRLLSRRGPDRRRRDRR*
Ga0070706_1002731642	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADLLVLAPWLIFGAALAAICYRLLTRRGACRRHRRGGR*
Ga0070707_1006646122	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADLLMVAPWLIFGGALAAICYRLLSRRSASGRHWRDSR*
Ga0066697_103516152	3300005540	Soil	MLEAGVSGANLLVLAPWLIFGACVVAIGYRLLSRRGPDRRRRRDHR*
Ga0070665_1023137171	3300005548	Switchgrass Rhizosphere	VAITANLLVLAPWLIFGAGLAVICYRLLSRRASSHRHRRDDR*
Ga0068855_1015915821	3300005563	Corn Rhizosphere	MLEAGVNGANLLVLAPWLIFGACVVAIGYRLLSRRGPDRRRRDRR*
Ga0066706_104591941	3300005598	Soil	VNGANLLVLAPWLIFGACVVAIGYRLLSRRGPDRRRRDRR*
Ga0068859_1020058072	3300005617	Switchgrass Rhizosphere	VTAADLLVLAPWLIFGAAVAVICYRLLTRRGASRRNRRDGR*
Ga0068861_1023609561	3300005719	Switchgrass Rhizosphere	VAITANLLVLAPWLIFGAGLAVICYRLLSRRASSHRHRRDD
Ga0066903_1007268521	3300005764	Tropical Forest Soil	VSGTDLLVLAPWLIFGACIIAICYRLFTRRGAARRRRRDGRE*
Ga0066903_1026045032	3300005764	Tropical Forest Soil	MEAEVTVADLLVLAPWVIFGAGLAVICYRLLRRCGPSHRHQRGSR*
Ga0066903_1046809232	3300005764	Tropical Forest Soil	VTAADLLVLAPWLIFGAGLAVICYRLLARRGACHRHRRDSR*
Ga0066903_1067769681	3300005764	Tropical Forest Soil	MEAEVTVADLLVLAPWVIFGAALAVICYRLLRSCGASHRHQRGSR*
Ga0070717_104173602	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADLLMVAPWLIFGGALAAICYRLLSRRSASGRR*
Ga0075432_102867912	3300006058	Populus Rhizosphere	VTAADLLVLAPWLIFGAALAVICYRLLARRRASRRHRRGGR*
Ga0075017_1000697463	3300006059	Watersheds	VTVADLLVLAPWVIFGAGLAVICYRLFSRCGPSHRHQRDSR*
Ga0070715_100511423	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	GGGVTAADLLVLAPWLIFGAALAVICYRLLARRRASRRHRRDGR*
Ga0070716_1013413951	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RATCDGGGVTAADLLVLAPWLIFGAALAVICYRLLARRRASRRHRDSR*
Ga0075014_1001481982	3300006174	Watersheds	GKQRASDGGGVTVAELLVLAPWVIFGAGLAVICYRLFSRCGPSHRHQRDSR*
Ga0075421_1008606321	3300006845	Populus Rhizosphere	VTAADLLVLAPWLIFGAALAVICYRLLARRRASRRHRRGG
Ga0075425_1000368436	3300006854	Populus Rhizosphere	VTAADLLVLAPWLIFGAALAVICYRLLARRRASRRHRDSR*
Ga0075425_1005637244	3300006854	Populus Rhizosphere	VTAADLLVLAPWLIFGAALAAICYRLLTRRGAPRRHRRGRR*
Ga0075425_1021545051	3300006854	Populus Rhizosphere	VTAADLLVLAPWLIFGAALAAICYRLLTRRGASRRHRRNGQ*
Ga0075434_1002385174	3300006871	Populus Rhizosphere	GVNGANLLVLAPWLIFGACVVAIGYRLLSRRGPDRRRRDRR*
Ga0075436_1000758245	3300006914	Populus Rhizosphere	VNGASLLVLAPWLIFGACVVAIGYRLLSRRGPDRRRRDRR*
Ga0066710_1034385511	3300009012	Grasslands Soil	VTAADLLVLAPWLIFGAALAVICYRLLARRRASRRHSLGGR
Ga0066709_1002751673	3300009137	Grasslands Soil	MLEAGVSGANLLVLAPWLIFGACVVAIGYRLLSRRGPDRRRRDRR*
Ga0105241_106140291	3300009174	Corn Rhizosphere	VTAADLLVLAPWLIFGAAVAAICYRLLARRRASRRHHRDGR*
Ga0126380_103058693	3300010043	Tropical Forest Soil	VTAADLLVLAPWLIFGAALAVICYRLLARRGACHRHRRDSR*
Ga0126384_102456192	3300010046	Tropical Forest Soil	MVQQRAGGGVSGANLLVLVPWLIFGACVVAICCRLFTRRGAARRRRRDGRE*
Ga0126382_100059571	3300010047	Tropical Forest Soil	GGGVSGANLLVLVPWLIFGACVVAICCRLFTRRGAARRRRRDGRE*
Ga0126382_100300265	3300010047	Tropical Forest Soil	MVQQRAGGGVSGANLLVLVPWLIFGACVVAICCRLFTRRGAARRRR
Ga0126373_103824113	3300010048	Tropical Forest Soil	VTAVDLLVLAPWLVFGAGLSVLGYRLLAHRGRPRRHGR*
Ga0126372_102611201	3300010360	Tropical Forest Soil	VSGADLLVLAPWLIFGACVVAICYRLFTRRGAARRRRR
Ga0126372_103595161	3300010360	Tropical Forest Soil	FSRGIRMEAQVTVADLLVLAPWVIFGAGLAVICYRLLRRCGASHGHQRDSR*
Ga0126372_106372992	3300010360	Tropical Forest Soil	VTAANLLVLAPWLIFGAGLAVICYRLLARRGPCHRHRRDSR*
Ga0126372_128854042	3300010360	Tropical Forest Soil	VTAGDVLMVAPWLIFGGALAAICYRLLSRRSASGRH*
Ga0126378_100046702	3300010361	Tropical Forest Soil	VTAAHLLVLAPWLIFAAGLAVICGRLLIHRSASRRHHHDGR*
Ga0126378_108217001	3300010361	Tropical Forest Soil	VTAADLLVLAPWLIFGAGLAVICYRLLARRGTCHRHRRDSR*
Ga0126383_103218433	3300010398	Tropical Forest Soil	VLAPWVIFGAGLAVICYRLLRRCGASHGHQRDSR*
Ga0134122_117341862	3300010400	Terrestrial Soil	GQHVMEADVTAADLLVLAPWLIFGAAVAVICYRLLTRRGASRRNRRDGR*
Ga0137364_100841624	3300012198	Vadose Zone Soil	MEAEVTRADLLVLAPWLIFGAALAAICYRLLARRRASRRHRRGGR*
Ga0137383_105454262	3300012199	Vadose Zone Soil	VTAADLLVLAPWLIFGAALAVICYRLLTRRRASRRHRRDGR*
Ga0137365_100267945	3300012201	Vadose Zone Soil	VLEAGVTAANLLVLAPWLIFGACVVAISYRLLSRRRPDRRRRRDHR*
Ga0137365_104178211	3300012201	Vadose Zone Soil	MEAEVTAADLLVLAPWLIFGAALAAICYRLLARRRASRRHRRCGR*
Ga0137377_100075259	3300012211	Vadose Zone Soil	VTAANLLVLAPWLIFVAGLAAVCYRLLSHRSASHRHRRDSR*
Ga0137370_102780761	3300012285	Vadose Zone Soil	MEAEVTGADLLVLAPWLIFGAALAAICYRLLTRRRASRRHRRGDR*
Ga0137371_100422981	3300012356	Vadose Zone Soil	MEAEVTGADLLVLAPWLIFGAALAAICYRLLARRRASRRHRRGGR*
Ga0137371_101500513	3300012356	Vadose Zone Soil	MLEARVSGANLLVLAPWLIFGACVVAIGYRLLSRRGPDRRRRRDHR*
Ga0137371_102253991	3300012356	Vadose Zone Soil	MEAEVTAADLLVLAPWLIFGAALAAICYRLLARRGASRRHRRGGR*
Ga0137371_103026382	3300012356	Vadose Zone Soil	VTAANLLVLAPWLIFGAGLAVICYRLLARRGACHRHRRDSR*
Ga0137404_118765481	3300012929	Vadose Zone Soil	MEADVTAADLLVLAPWLIFGAALAAICYRLLARRRASRRHHRDGQ*
Ga0164301_110570581	3300012960	Soil	VTAADLLVLAPWLIFGAALAVICYRLLARRRASRRHHHRDGR*
Ga0126369_102377073	3300012971	Tropical Forest Soil	MEAEVTVADLLVLAPWVIFGAGLAVICYRLLRRCDASHRHQRGSR*
Ga0126369_111503281	3300012971	Tropical Forest Soil	AEGGGVTAANLLVLAPWLIFGAGLAVICYRLLARRGACHRHRRDSR*
Ga0164309_111591151	3300012984	Soil	MEADVTAADLLVLAPWLIFGAALAAICYRLLTRRGASRRNRRDGR*
Ga0132256_1033199671	3300015372	Arabidopsis Rhizosphere	MEADVTAADLVVLAPWLIFGAAVAVICYRLLTRRGASRRNRRDGR*
Ga0132257_1011502743	3300015373	Arabidopsis Rhizosphere	MEADVTAADLVVLAPWLIFGAALAVICYRLLARRRASRRHRDSR*
Ga0182032_100984671	3300016357	Soil	DMQCGKRMEAQVTVADLLVLAPWVIFGAGLAVICYRLLRRCGASHRHQRDSR
Ga0182037_112677322	3300016404	Soil	MEAQVTVADLLVLAPWVIFGAGLAVICYRLLRRCDASHRHQRDSR
Ga0182038_117261751	3300016445	Soil	VTVADLLVLAPWVIFGAGLAVICYRLLRRCNACHGHQ
Ga0134069_13303861	3300017654	Grasslands Soil	VNGANLLVLAPWLIFGACVVAIGYRLLSRRGPDRRRR
Ga0187785_105324521	3300017947	Tropical Peatland	MEAQVTVADLLVLAPWVIFGAGLAVICYRLLRRCGASHRHQRDSR
Ga0187779_100480752	3300017959	Tropical Peatland	VEEAEVTVADLLLLAPWVIFGAGLAVICYRLQRRCGAADRHQRDSR
Ga0187779_101110312	3300017959	Tropical Peatland	LTVADLLVLAPWVVFGAGLAVICYRLFSRCGASHRHQRDSR
Ga0187779_107577231	3300017959	Tropical Peatland	MEAEVTVADLLVLAPWVIFGAALAVICYQLLRRCGASHRHQRDSR
Ga0187780_103960392	3300017973	Tropical Peatland	VTVADLLLLAPWVIFGAGLAVICYRLQRRCGAADRHQRDSR
Ga0187777_101247133	3300017974	Tropical Peatland	VTAANLLVLAPWLIFGAALAAICYRLLIHRGASRRHRRDSR
Ga0187767_100588342	3300017999	Tropical Peatland	VTVADLLVLAPWVIFGAALAVICYRLLRRCGASHRHQRDSR
Ga0187767_100855161	3300017999	Tropical Peatland	VTVADLLLVAPWVIFGAGLAVICYRLQRRCGAADRHQRDSR
Ga0187766_101419352	3300018058	Tropical Peatland	MTTADLLVLAPWLIFGGGLGAIGYRLLSLRGRTHRDRRDTR
Ga0187766_105503852	3300018058	Tropical Peatland	VTVADLLVLAPWVIFGAGLAVICYRLQRRGGASDRHQRDSR
Ga0187765_100050165	3300018060	Tropical Peatland	VTVADLLVLVPWVIFGAGLAVICYRLYSRGASHRHQRDSR
Ga0187765_100144803	3300018060	Tropical Peatland	MTTADLLVLAPWLIFGGGLGAIGYRLLSLRGRAHRDRRDTR
Ga0126371_106690141	3300021560	Tropical Forest Soil	VTAANLLVLAPWLIFGAGLAVICYRLLARRGTCHRHRRDSR
Ga0126371_116114721	3300021560	Tropical Forest Soil	MEAEVTVADLLVLAPWVIFGAALAVICYRLLRSCGASHRHQRGSR
Ga0126371_117077702	3300021560	Tropical Forest Soil	VTAVDLLVLAPWLVFGAGLSVLGYRLLAHRGRPRRHGR
Ga0126371_120627212	3300021560	Tropical Forest Soil	MEAEVTVADLLVLAPWVIFGAGLAVICYRLLRRCGPSHRHQRGSR
Ga0222622_110917651	3300022756	Groundwater Sediment	MLEAGVSGANLLVLAPWLIFGACVVAIGYRLLSRRGPDRRRRRRDHR
Ga0207692_101060291	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	TAADLLVLAPWLIFGAALAAICYRLLARRRASRRHHRDGR
Ga0207693_101236914	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADLLVLAPWLIFWAALAVICYRLLARRRASRRHRRD
Ga0207660_114131511	3300025917	Corn Rhizosphere	VTAADLLVLAPWLIFGAAVAVICYRLLTRRGASRRNRRDGR
Ga0207660_117348072	3300025917	Corn Rhizosphere	VAITANLLVLAPWLIFGAGLAVICYRLLSRRASSHRHRRDDR
Ga0207646_100634842	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTAADLLMVAPWLIFGGALAAICYRLLSRRSASGRHWRDSR
Ga0207664_105334421	3300025929	Agricultural Soil	VTAADLLVLAPWLIFGAALAVICYRLLARRRASRRHRRGGR
Ga0207665_104339242	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLEAGVNGANLLVLAPWLIFGACVVAIGYRLLSRRGPDRRRRDRR
Ga0207641_107331341	3300026088	Switchgrass Rhizosphere	VTAADLLVLAPWLIFGAALAAICYRLLARRRTSRRHRRGGR
Ga0209234_10756662	3300026295	Grasslands Soil	MLEAGVSGANLLVLAPWLIFGACVVAIGYRLLSRRGPDRRRRRDHR
Ga0209648_106158182	3300026551	Grasslands Soil	MEDAGLTGGDLVVLAPWLIFGAGLAAIGYGLMSRRRTSHR
Ga0209466_10128992	3300027646	Tropical Forest Soil	MVQQRAGGGVSGANLLVLVPWLIFGACVVAICCRLFTRRGAARRRRRDGRE
Ga0209465_103752351	3300027874	Tropical Forest Soil	VTAADLLVLAPWLIFGAGLAVICYRLLARRGACHRHRRDSR
Ga0207428_100901615	3300027907	Populus Rhizosphere	VNGANLLVLAPWLIFGACVVAIGYRLLSRRGPDRRRRDRR
Ga0307323_100509821	3300028787	Soil	VSGANLLVLAPWLIFGACVVAIGYRLLSRRGPDRRRRRDHR
Ga0318534_101235102	3300031544	Soil	VTVADLLVLAPWVIFGAGLAVICYRLLRRCSASHGHQ
Ga0318538_101508942	3300031546	Soil	VTVADLLVLAPWVIFGAGLAVICYRLLRRCSASHGHQRDIR
Ga0318573_101945811	3300031564	Soil	MEAQVTVADLLVLAPWVIFGAGLAVICYRLLRRCGASHGHQRDIR
Ga0318555_100906382	3300031640	Soil	MQCGKRMEAQVTVADLLVLAPWVIFGAGLAVICYRLLRRCSASHGHQRDIR
Ga0318542_100477781	3300031668	Soil	CPGTDMQCGKRMEAQVTVADLLVLAPWVIFGAGLAVICYRLLRRCGASHRHQRDSR
Ga0318542_100792412	3300031668	Soil	MQCGKRMEAQVTVADLLVLAPWVIFGAGLAVICYRLLRRCNACHGHQRDSR
Ga0318521_103719632	3300031770	Soil	VTVADLLVLAPWVIFGAGLAVICYRLLRRCSASHGH
Ga0318557_103698182	3300031795	Soil	MQCGKRMEAQVTVADLLVLAPWVIFGAGLAVICYRLLRRCGASHGHQRDIR
Ga0318550_103063652	3300031797	Soil	VLGPTVQPRQRMEAQVTVADLLVLAPWVIFGAGLAVICYRLLRRCGASHRHQRDSR
Ga0318568_100498912	3300031819	Soil	MQCGKRMEAQVTVADLLVLAPWVIFGAGLAVICYRLLRRCGASHGHQRDSR
Ga0318517_105305201	3300031835	Soil	GPTVQPRQRMEAQVTVADLLVLAPWVIFGAGLAVICYRLLRRCSASHGHQRDIR
Ga0318551_102170751	3300031896	Soil	MEAQVTVADLLVLAPWVIFGAGLAVICYRLLRRCNACHGHQRDSR
Ga0310913_102672212	3300031945	Soil	VTVADLLVLAPWVIFGAGLAVICYRLLRRCGASHGHQRDSR
Ga0306924_105507592	3300032076	Soil	MEAQVTVADLLVLAPWVIFGAGLAVICYRLLRRCGASHGHQRDSR
Ga0307470_106067041	3300032174	Hardwood Forest Soil	MEADVTAADLLVLAPWLIFGAAVAVICYRLLARRRASRRHRDGR
Ga0307472_1003626532	3300032205	Hardwood Forest Soil	VTVADLLVLAPWVIFGAGLAVICYRLLHRCGASHRHQRDSR
Ga0307472_1020344531	3300032205	Hardwood Forest Soil	VTAADLLVLAPWLIFGAALAVICYRLLTRRRASRRHRRGGQ
Ga0335079_1000332616	3300032783	Soil	MEAEVTVADLLVLAPWMIFGAALAVICYRLLRRCGTSGRHQRDSR
Ga0335079_1000341720	3300032783	Soil	VNAADLLVLAPWLLFGAGLAVIGYRLSRRGATSRRHRRRIR
Ga0335079_111505121	3300032783	Soil	MTTADLLVLAPWLIFGGGLGAIGCRLLSLRGRAHRDRRDTR
Ga0335079_113520862	3300032783	Soil	ITANLLVLAPWLIFGAGLAVICYRLLSRRAAAHRHRRDRR
Ga0335078_100502136	3300032805	Soil	VNAADLIVLAPWLLFGAGLGVIGYRLFHLRVTSHRRRRQIR
Ga0335078_103786792	3300032805	Soil	MAITANLLVLAPWLIFGAGLAAICYRLLSRRAARRRRRDHR
Ga0335078_107059672	3300032805	Soil	VTAITANLLVLAPWLIFGAGLAVICYRLLSRRAAAHRHRRDRR
Ga0335081_109418081	3300032892	Soil	MTTADLLVLAPWLIFGGGLGAIGYRLLSLRGRAHRDRRDTS
Ga0335072_103872373	3300032898	Soil	MADLLVLTPWLIFGAGLGAIGFRLLSQRGTTRRHRRDTRLRH
Ga0335076_1000435710	3300032955	Soil	VTAANLLVLAPWLIFGAALAAICYRLLTHRGASRRHRRDSR
Ga0318519_102940502	3300033290	Soil	VTVADLLVLAPWVIFGAGLAVICYRLLRRCGASHG
Ga0314867_143024_57_182	3300033808	Peatland	VNAADLIVLAPWLLFGAGLGVIGYRLFHPRVTSHRRHRQIR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F056948

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences