Metagenome / Metatranscriptome Family F056984

Basic Information
Family ID	F056984
Family Type	Metagenome / Metatranscriptome
Number of Sequences	137
Average Sequence Length	46 residues
Representative Sequence	MFDKFIYRLCDKIVSICESIQSRIKTTNQKDWLNGYNKWKSRINKNDTE
Number of Associated Samples	100
Number of Associated Scaffolds	137

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	49.61 %
% of genes near scaffold ends (potentially truncated)	39.42 %
% of genes from short scaffolds (< 2000 bps)	73.72 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (70.073 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (42.336 % of family members)
Environment Ontology (ENVO)	Unclassified (43.066 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (79.562 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68. 1DelMOSpr2010_101313831 2DelMOWin2010_100471253 3DelMOWin2010_101638771 4DelMOWin2010_102374521 5JGI11705J14877_100236363 6JGI11705J14877_100398934 7JGI11772J19994_10043372 8GOS2228_10041331 9GOS2229_10136975 10Ga0074648_10162439 11Ga0074648_10173652 12Ga0074648_10382514 13Ga0074648_11670552 14Ga0074647_100067819 15Ga0074647_100107331 16Ga0074647_10038971 17Ga0076924_13118762 18Ga0075474_100677333 19Ga0075478_100720993 20Ga0075502_10440583 21Ga0075512_13091972 22Ga0075504_14026911 23Ga0075516_10004812 24Ga0075503_11291263 25Ga0075514_19569441 26Ga0075510_101168591 27Ga0075486_10789512 28Ga0075486_18146881 29Ga0075505_14931711 30Ga0070749_103233583 31Ga0070754_100824913 32Ga0075481_100352844 33Ga0075475_104177182 34Ga0070750_100108907 35Ga0070746_101457413 36Ga0070746_102527862 37Ga0099851_100225220 38Ga0099849_10025411 39Ga0099849_10728132 40Ga0099847_10952312 41Ga0099848_13390721 42Ga0102948_10701223 43Ga0102948_12849981 44Ga0102951_10532162 45Ga0102954_10721442 46Ga0099850_13819442 47Ga0102960_11125772 48Ga0102960_11646811 49Ga0102963_10166173 50Ga0102963_13560802 51Ga0129342_11491822 52Ga0129342_12930062 53Ga0129351_11178303 54Ga0136656_11048771 55Ga0129324_100360341 56Ga0129324_104406221 57Ga0136549_101040671 58Ga0129347_12012782 59Ga0129349_13490491 60Ga0129349_13621802 61Ga0129344_10188661 62Ga0129344_11397042 63Ga0129344_12728002 64Ga0129326_11073062 65Ga0129326_11359371 66Ga0129331_11022951 67Ga0129353_10134127 68Ga0129352_101419741 69Ga0129341_12467391 70Ga0129332_10259042 71Ga0129332_11941121 72Ga0182076_14460092 73Ga0182096_12510201 74Ga0182083_18209141 75Ga0182093_14725622 76Ga0182072_10952701 77Ga0182084_14199662 78Ga0181584_107124632 79Ga0181583_100558565 80Ga0181583_103427461 81Ga0181583_104856321 82Ga0181580_109285342 83Ga0181581_102225221 84Ga0181590_107295842 85Ga0181579_101623852 86Ga0180433_113412452 87Ga0182081_15531122 88Ga0182068_13593941 89Ga0194029_10298912 90Ga0194023_10199221 91Ga0182086_10989102 92Ga0213862_100766102 93Ga0213864_102428951 94Ga0213868_100444462 95Ga0213868_103596771 96Ga0222717_100195472 97Ga0222717_103891961 98Ga0222718_101009941 99Ga0222718_102199862 100Ga0222718_104131351 101Ga0222716_102247991 102Ga0222716_107746292 103Ga0222715_104461703 104Ga0222719_100263863 105Ga0222719_101290153 106Ga0222719_104768152 107Ga0222719_107079752 108Ga0212029_10322172 109Ga0212021_10147361 110Ga0212021_10776103 111Ga0212031_10733032 112Ga0196899_10574351 113Ga0255780_103208412 114Ga0255778_102510242 115Ga0255778_104526712 116Ga0208303_10707672 117Ga0209194_10602732 118Ga0208161_10029368 119Ga0208161_10288205 120Ga0208795_10022701 121Ga0208150_11498472 122Ga0208899_10026477 123Ga0208899_10029012 124Ga0208767_10285146 125Ga0208425_100139116 126Ga0208543_10440161 127Ga0209193_10142362 128Ga0208917_12173101 129Ga0208645_11106902 130Ga0208645_11152352 131Ga0208644_10654232 132Ga0209955_10248661 133Ga0209962_10033295 134Ga0209961_10031121 135Ga0209951_10158763 136Ga0209932_10603002 137Ga0209932_11354312
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68. 1DelMOSpr2010_101313831 2DelMOWin2010_100471253 3DelMOWin2010_101638771 4JGI11705J14877_100236363 5GOS2228_10041331 6Ga0074648_11670552 7Ga0074647_100107331 8Ga0075512_13091972 9Ga0075504_14026911 10Ga0070749_103233583 11Ga0070746_102527862 12Ga0099849_10025411 13Ga0129324_104406221 14Ga0129347_12012782 15Ga0129344_11397042 16Ga0129326_11359371 17Ga0222718_102199862 18Ga0255778_104526712
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48. 1DelMOWin2010_102374521 2JGI11705J14877_100236363 3JGI11705J14877_100398934 4JGI11772J19994_10043372 5Ga0074648_10382514 6Ga0074647_100067819 7Ga0075474_100677333 8Ga0075503_11291263 9Ga0075475_104177182 10Ga0099851_100225220 11Ga0102948_10701223 12Ga0102954_10721442 13Ga0102960_11125772 14Ga0129326_11073062 15Ga0180433_113412452 16Ga0182081_15531122 17Ga0182068_13593941 18Ga0213862_100766102 19Ga0213868_100444462 20Ga0222718_101009941 21Ga0222718_102199862 22Ga0212021_10147361 23Ga0212031_10733032 24Ga0208644_10654232 25Ga0209932_11354312
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.55% β-sheet: 0.00% Coil/Unstructured: 45.45%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Pfam ID	Name	% Frequency in 137 Family Scaffolds
PF08804	gp32	51.09
PF02915	Rubrerythrin	5.11
PF16805	Trans_coact	3.65
PF08291	Peptidase_M15_3	2.19
PF12322	T4_baseplate	1.46
PF02195	ParBc	1.46
PF08993	T4_Gp59_N	1.46
PF12705	PDDEXK_1	1.46
PF10263	SprT-like	0.73
PF11246	Phage_gp53	0.73

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	29.93 %
Unclassified	root	N/A	70.07 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	5.84 %
Unclassified	root	N/A	70.07 %
Viruses	superkingdom	All Organisms → Viruses	24.09 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.84 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	8.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.87 %
Unclassified	root	N/A	70.07 %

Name	Rank	Taxonomy	Distribution
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	8.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.87 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.84 %
Unclassified	root	N/A	70.07 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.87 %
Unclassified	root	N/A	70.07 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	8.03 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	8.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.87 %
Unclassified	root	N/A	70.07 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	8.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.87 %
Unclassified	root	N/A	70.07 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	8.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.87 %
Unclassified	root	N/A	70.07 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.87 %
Unclassified	root	N/A	70.07 %
unclassified Myoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae	6.57 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.73 %
Pelagibacter phage HTVC008M	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Pelagibacter phage HTVC008M	6.57 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	13.87 %
Unclassified	root	N/A	70.07 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10131383	Not Available	887	Open in IMG/M
3300000117\|DelMOWin2010_c10047125	Not Available	1935	Open in IMG/M
3300000117\|DelMOWin2010_c10237452	Not Available	539	Open in IMG/M
3300001419\|JGI11705J14877_10023636	All Organisms → Viruses → Predicted Viral	2409	Open in IMG/M
3300001419\|JGI11705J14877_10039893	All Organisms → cellular organisms → Bacteria → Proteobacteria	1700	Open in IMG/M
3300001748\|JGI11772J19994_1004337	Not Available	2751	Open in IMG/M
3300001948\|GOS2228_1004133	Not Available	3394	Open in IMG/M
3300001963\|GOS2229_1013697	All Organisms → Viruses → Predicted Viral	1536	Open in IMG/M
3300005512\|Ga0074648_1016243	All Organisms → cellular organisms → Bacteria → Proteobacteria	4434	Open in IMG/M
3300005512\|Ga0074648_1017365	Not Available	4211	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	1.46%
Marine	Environmental → Aquatic → Marine	79.56%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	18.25%
Sediment	Environmental → Aquatic → Sediment	0.73%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	49.63%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	0.73%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	16.06%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	2.92%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.46%
River	Environmental → Aquatic → Freshwater → River	1.46%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	17.52%
Unclassified	Environmental → Aquatic → Marine → Unclassified	9.49%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	3.65%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	14.60%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	1.46%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	0.73%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	49.63%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	12.41%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	9.49%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	2.92%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.73%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	42.34%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	8.76%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.46%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	4.38%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	0.73%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.92%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.46%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.73%
Marine Methane Seep Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment	0.73%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.46%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	5.11%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	3.65%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water And Sediment	2.19%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	1.46%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	14.60%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.92%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	5.11%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001419	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)	Environmental	Open in IMG/M
3300001748	Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)	Environmental	Open in IMG/M
3300001948	Marine microbial communities from Chesapeake Bay, Maryland, USA - GS012	Environmental	Open in IMG/M
3300001963	Marine microbial communities from Nags Head, North Carolina, USA - GS013	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300005611	Saline surface water microbial communities from Etoliko Lagoon, Greece	Environmental	Open in IMG/M
3300005747	Seawater microbial communities from Vineyard Sound, MA, USA - control T14	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M

Showing 1 to 10 of 100 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_101313831	3300000116	Marine	MFDEFIYRLCDKIVTICEKVQDRIKNTPHKKWLKGYHKHKSRINKNDTE*
DelMOWin2010_100471253	3300000117	Marine	MFDSIIYKLCDKIVSICERIQNRIKNTPQKDWLKGYHKWKRSINKNEGE*
DelMOWin2010_101638771	3300000117	Marine	MFDKIIYKICGWVVSICERIQNRIKNTPQKDWLNGYRK
DelMOWin2010_102374521	3300000117	Marine	MFDKFIYRLCDKIVSICESIQSRIKTTNQKDWLNGYNKWKSRINKNDTE*
JGI11705J14877_100236363	3300001419	Saline Water And Sediment	MFDNFIYRLCDKIVTICEKVKARIKNTSHKKWVKGYNEWKKKYK*
JGI11705J14877_100398934	3300001419	Saline Water And Sediment	MFDKIIYKLCDKIVSICERVQNRTKNTPQKDWLNGYRKWKRSIN
JGI11772J19994_10043372	3300001748	Saline Water And Sediment	MFDKIIYKICDKVVSICERVQNRTKNTPQKDWLKGYRKWKSRINNNEGD*
GOS2228_10041331	3300001948	Marine	MFDGLIYRLCDKIVSICESIKSRIKSTPEKSWLKDYKNWKKTRINKNDTE*
GOS2229_10136975	3300001963	Marine	MFDKFIYRLCDKIVSICESIQSRIKTTSQKDWLNGYNKWKSRINKNDTE*
Ga0074648_10162439	3300005512	Saline Water And Sediment	MFDNFIYRLCDKIVTICEKVKTRIKNTSHKKWVKGYNEWKKKYK*
Ga0074648_10173652	3300005512	Saline Water And Sediment	MFDKIIYKICDKVVSICESIKGRIKTTPQKDWLKGYRKWKSRINNNEGD*
Ga0074648_10382514	3300005512	Saline Water And Sediment	MFDKIVYRICDKIVSICESIKGRIKTTPQKDWLKGYRKWKSRINKNEGD*
Ga0074648_11670552	3300005512	Saline Water And Sediment	MFDNFIYRLCDKIVTICESIKSRIKTTKDKDWIKGYRKWKSHINKNDTE*
Ga0074647_100067819	3300005611	Saline Water And Sediment	MFDNFIYRLCDKIVSFCERIQNRIKNTPQKKWLKEYFKHKSRINKNDTE*
Ga0074647_100107331	3300005611	Saline Water And Sediment	MFDKIVYRICDKIVSICESIKGRIKTTPQKDWLKGYRKWKSR
Ga0074647_10038971	3300005611	Saline Water And Sediment	MFDKIIYKICDKVVSICESIKGRIKTTPQKDWLKGYRKWKSR
Ga0076924_13118762	3300005747	Marine	MFDKIIYKICGWVVSICERIQNRIKNTPQKDWLNGYRKWKRSINKNEGD*
Ga0075474_100677333	3300006025	Aqueous	MFDEFIYRLCDKIVTICESIQSRIKSTNDKDWIKGYRKWKSHINKNDTE*
Ga0075478_100720993	3300006026	Aqueous	MFDEFIYRLCDKIVNICESIKSRIKTTKDKDWIKGYRKWKSHINKNDTE*
Ga0075502_10440583	3300006357	Aqueous	FIYRLCDKIVSFCERIQNRIKNTPQKKWLKEYFKHKSRINKNDTE*
Ga0075512_13091972	3300006374	Aqueous	SICESIQSRIKTTNQKDWLNGYNKWKSRINKNDTE*
Ga0075504_14026911	3300006383	Aqueous	SICERIQNRIKNTPQKDWLKGYHKWKRSINKNEGE*
Ga0075516_10004812	3300006384	Aqueous	ICESIQSRIKTTNQKDWLNGYNKWKSRINKNDTE*
Ga0075503_11291263	3300006400	Aqueous	MFDNFIYRLCDKIVSICESIKSRIKTTPQKSWLKGYNEWKSRINKNDTE*
Ga0075514_19569441	3300006403	Aqueous	EVIMFDNFIYRLCDKIVSICESIKSRIKTTPQKSWLKGYNEWKSRINKNDTE*
Ga0075510_101168591	3300006405	Aqueous	MFDNFIYRLCDKIVSICESIQSRIKTTNQKDWLNGYNKWKSRINKNDTE*
Ga0075486_10789512	3300006425	Aqueous	MFDKIVYRICDKIVSICESIKGRIKTTPQKDWLKSYRKWKSRINNNEGD*
Ga0075486_18146881	3300006425	Aqueous	MFDNFIYNLCDKIVSFCERIQNRIKNTPQKKWLKEYFKHKSHINKNDTE*
Ga0075505_14931711	3300006571	Aqueous	KIMFDEFIYRLCDKIVNICESIQSRIKTTRDKDWIKGYRKWKSHINKNDTE*
Ga0070749_103233583	3300006802	Aqueous	MFDKFIYRLCDKIVSICESIQSRIKTTNQKDWLNGYNKW
Ga0070754_100824913	3300006810	Aqueous	MFDNFIYRLCDKIVSFCERIQNRIKNTPQKKWLKEYFKHKSLINKNDTE*
Ga0075481_100352844	3300006868	Aqueous	MFDSIIYKLCDKIVSICERIQNRIKNTPQKDWLKGYHKWKRSINKNEGD*
Ga0075475_104177182	3300006874	Aqueous	MFDKIIYKICGWVVTICERIQNRIKNTPQKDWLNGYRKWKRSINKNEGD*
Ga0070750_100108907	3300006916	Aqueous	MFDNFIYRLCDKIVSFCERIQNRIKNTPQKKWLKEYFKHKSHINKNDTE*
Ga0070746_101457413	3300006919	Aqueous	MFDKIIYKICDKVVSICESIKGRIKTTPQKDWLKGYRKWKSRIN
Ga0070746_102527862	3300006919	Aqueous	MFDGLIYRLCDKIVSICESIKSRIKSTPEKSWLKGYNR
Ga0099851_100225220	3300007538	Aqueous	MFDNFIYRLCDKIVSICERIQNRIKNTPQKKWLKDYFKHKSRINKNEGD*
Ga0099849_10025411	3300007539	Aqueous	MFDNFIYRLCDKIVSFCERIQNRIKNTPQKKWLKE
Ga0099849_10728132	3300007539	Aqueous	MFDKIIYKICGKVVSICERIQNRIKNTPQKDWLNGYRKWKRSINKNEGD*
Ga0099847_10952312	3300007540	Aqueous	MFDNFIYRLCDKIVSFCERIQNRIKNTPQKKWLKEYFKHKSRINKNEGD*
Ga0099848_13390721	3300007541	Aqueous	MFDNFIYRLCDKIVSFCERIQNRIKNTPQKKWLKEY
Ga0102948_10701223	3300007623	Water	MFDEFIYRMCDKIVSICESIKDRIKNTPQKNWLKGYRKHKSRINKNDTA*
Ga0102948_12849981	3300007623	Water	MFDSIIYKLCDKIVSICERIQNRIKNTPQKDWLNGYRKWKSHINKNEGD*
Ga0102951_10532162	3300007725	Water	MFDKIIYKICGRVVSICERIQNRIKNTPQKDWLNGYRKWKRSINKNEGD*
Ga0102954_10721442	3300007778	Water	MFDSIIYKLCDKIVSICEKIQTRIKDTPQKDWLNGYRKWKRSINKNEGD*
Ga0099850_13819442	3300007960	Aqueous	MFDKIVYKICDKIVSICETIKGRIKTTPSKDWLKGYRKWKSRINNNEGD*
Ga0102960_11125772	3300009000	Pond Water	MFDNFIYRLCDKIVTICEKVQDRIKNTPHKKWLKGYYKHKSRINKNDTE*
Ga0102960_11646811	3300009000	Pond Water	MFDGFIYRLCDKIVSICERIQNRIKTTPQKSWLKGYNKWKSRINKNEGD*
Ga0102963_10166173	3300009001	Pond Water	MFDNFIYRLCDKIVTICERIQHRIKNTPHKKWLKGYFKHKSRINKNEGD*
Ga0102963_13560802	3300009001	Pond Water	MFDSIIYRLCDKIVSICERIQNRIKTTPQKSWLKGYNEWKSRINKNDTDN
Ga0129342_11491822	3300010299	Freshwater To Marine Saline Gradient	MFDEFIYRLCDKIVTICESIQSRIKSTKDKDWIKGYRKWKSHINKNDTE*
Ga0129342_12930062	3300010299	Freshwater To Marine Saline Gradient	MLDGFIYRLCDKIVSICESIKSRIKTTSNKDWIKGYRKWKSHINKNDTE*
Ga0129351_11178303	3300010300	Freshwater To Marine Saline Gradient	MFDEFIYRLCDKIVTICESIQSRIKSTKDKDWIKGYRKWKSRINKNDTE*
Ga0136656_11048771	3300010318	Freshwater To Marine Saline Gradient	IYRLCDKIVTICESIKSRIKTTSNKDWIKGYRKHKSRINKNDTE*
Ga0129324_100360341	3300010368	Freshwater To Marine Saline Gradient	MFDKIIYKICDKVVSICESIKGRIKTTPQKDWLKGYRKWKSRINN
Ga0129324_104406221	3300010368	Freshwater To Marine Saline Gradient	KICDKVVSICESIKGRIKTTPQKDWLKGYRKWKSRINKNEGD*
Ga0136549_101040671	3300010389	Marine Methane Seep Sediment	LDVNMFDKIVYRICDKIVSICESIKGRIKTTPQKDWLKGYRKWKSRINKNEGD*
Ga0129347_12012782	3300012504	Aqueous	IVTICESIKSRIKTTSNKDWIKGYRKHKSRINKNDTE*
Ga0129349_13490491	3300012518	Aqueous	RLCDKIVSICESIKSRIKSTPEKSWLKGYNRWKSRINKNDTE*
Ga0129349_13621802	3300012518	Aqueous	IYRLCDKIVSICESIKSRIKTTSNKDWIKGYRKWKSHINKNDTE*
Ga0129344_10188661	3300012520	Aqueous	YKICDKVVSICESIKGRIKTTPQKDWLKGYRKWKSRINNNEGD*
Ga0129344_11397042	3300012520	Aqueous	FIYRLCGKIFSFCERIQNRIKNTPQKKWLKEYFKHKSRINKNDTE*
Ga0129344_12728002	3300012520	Aqueous	MFDSIIYRLCDKITSICERIQNRIKNTPHKKWLKGYYKHKSRINKNEGD*
Ga0129326_11073062	3300012522	Aqueous	MFDEFIYRLCDKIVNICESIKSRIKTTRDKDWIKGYRKWKSRINNNEGD*
Ga0129326_11359371	3300012522	Aqueous	YISINMFDNFIYRLCDKIVSFCERIQNRIKNTPQKKWLKEYFKHKSRINKNEGD
Ga0129331_11022951	3300012524	Aqueous	ICDKVVSICESIKGRIKTTPQKDWLKSYRKWKSRINNNEGD*
Ga0129353_10134127	3300012525	Aqueous	DKIIYKICDKVVSICESIKGRIKTTPQKDWLKGYRKWKSRINNNEGD*
Ga0129352_101419741	3300012528	Aqueous	VVSICESIKGRIKTTPQKDWLKGYRKWKSRINKNEGD*
Ga0129341_12467391	3300012966	Aqueous	RLCDKIVSFCERIQNRIKNTPQKKWLKEYFKHKSRINKNDTE*
Ga0129332_10259042	3300012969	Aqueous	SICESIKSRIKTTSNKDWIKGYRKWKSHINKNDTE*
Ga0129332_11941121	3300012969	Aqueous	IIYKICGWVVSICERIQNRIKNTPQKDWLNGYRKWKRSINKNEGD*
Ga0182076_14460092	3300016739	Salt Marsh	MLDKFIYRLCDKIVSICESIQNRIKTTNQKDWLNGYNKWKSRINKNDTE
Ga0182096_12510201	3300016740	Salt Marsh	NIMFDKFIYRLCDKIVSICESIQSRIKTTNQKDWLNGYNKWKSRINKNDTE
Ga0182083_18209141	3300016743	Salt Marsh	MFDSIIYKLCDKIVSICERIQNRIKNTPQKDWLKGYRKWKSRINKNEGD
Ga0182093_14725622	3300016745	Salt Marsh	FIYRLCDKIVSICESIQSRIKTTNQKDWLNGYNKWKSRINKNDTE
Ga0182072_10952701	3300016754	Salt Marsh	MLDKFIYRLCDKIVSICESIQSRIKTTNQKDWLNGYNKWKSRINKNDTE
Ga0182084_14199662	3300016762	Salt Marsh	SICESIQSRIKTTNQKDWLNGYNKWKSRINKNDTE
Ga0181584_107124632	3300017949	Salt Marsh	MFDKFIYRLCDKIVSICESIQSRIKTTNQKDWLNGYNKWKSRINKNDTE
Ga0181583_100558565	3300017952	Salt Marsh	MLDKFIYRLCDKIVSICESIQSRIKTTNQKDWLNGYNKWKSRI
Ga0181583_103427461	3300017952	Salt Marsh	YRLCDKIVSICESIQSRIKTTNQKDWLNGYNKWKSRINKNDTE
Ga0181583_104856321	3300017952	Salt Marsh	MFDKFIYRLCDKIVSICESIQSRIKTTNQKDWLNGYNKWKSRI
Ga0181580_109285342	3300017956	Salt Marsh	MFDKIVYRICDKIVSICESIKGRIKTTPQKDWLKGYRKWKSRINKNEGD
Ga0181581_102225221	3300017962	Salt Marsh	MFDSIIYKLCDKIVSICERIQNRIKNTPQKDWLKGYHKWKRSINKNEGE
Ga0181590_107295842	3300017967	Salt Marsh	MFDSIIYKLCDKIVSICEKIQTRIKDTPQKDWLKGYRKWKSRINKNEGD
Ga0181579_101623852	3300018039	Salt Marsh	MFDSIIYRLCDKITSICERIQNRIKNTPQKDWLKGYHKWKRSINKNEGE
Ga0180433_113412452	3300018080	Hypersaline Lake Sediment	MFDKFIYRLCDKIVSICESIQSRIKTTKDKDWIKGYRKWKSRINKNDTE
Ga0182081_15531122	3300019277	Salt Marsh	MFDSIIYRLCDKITSICERIQNRIKNTPHKKWLKGYYKHKSRINKNEGD
Ga0182068_13593941	3300019280	Salt Marsh	IYRLCDKIVTICEKVKARIKTTSHKKWIKGYNEWRNKYK
Ga0194029_10298912	3300019751	Freshwater	MFDEFIYRLCDKIVTICESIQSRIKSTKDKDWIKGYRKWKSHINKNDTE
Ga0194023_10199221	3300019756	Freshwater	MFDKIIYKICGWVVSICERIQNRIKNTPQKDWLNGYRKWKRSINKNEGD
Ga0182086_10989102	3300020013	Salt Marsh	FDKFIYRLCDKIVSICESIQSRIKTTNQKDWLNGYNKWKSRINKNDTE
Ga0213862_100766102	3300021347	Seawater	MLDGFIYRLCDKIVSICESIKSRIKTTSNKDWIKGYRKWKSHINKNDTE
Ga0213864_102428951	3300021379	Seawater	PGTYYEVIMFDNFIYRLCDKIVSFCERIQNRIKNTPQKKWLKEYFKHKSRINKNDTE
Ga0213868_100444462	3300021389	Seawater	MFDGLIYRLCDKIVSICESIKSRIKSTPEKSWLKGYNRWKSRINKNDTE
Ga0213868_103596771	3300021389	Seawater	MFDKIIYKICDKVVSICESIKGRIKTTPQKDWLKGYRKWKSRINNNEGD
Ga0222717_100195472	3300021957	Estuarine Water	MFDSIIYKLCDKIVSICERIQNRIKNTPQKDWLNGYRKWKRSINKNEGD
Ga0222717_103891961	3300021957	Estuarine Water	MFDNFIYRLCDKIVTICEKVQDRIKNTPHKKWLKGYYKHKSRINKNDTE
Ga0222718_101009941	3300021958	Estuarine Water	MFDGFIYRLCDKIVSICERIQNRIKTTPQKSWLKGYNKWKSRINKNEGD
Ga0222718_102199862	3300021958	Estuarine Water	MFDSIIYRLCDKIVSICERIQNRIKTTPQKSWLKGYNEWKSRINKNDTDNTGNTNTTNTK
Ga0222718_104131351	3300021958	Estuarine Water	MFDEFIYRLCDKIVTICESIQSRIKSTKDKDWIKGYRKWKSHINKND
Ga0222716_102247991	3300021959	Estuarine Water	VSICERIQNRIKNTPQKDWLNGYRKWKRSINKNEGD
Ga0222716_107746292	3300021959	Estuarine Water	MFDEFIYRMCDKIVSICESIKDRIKNTPQKNWLKGYRKHKSRINKNDTA
Ga0222715_104461703	3300021960	Estuarine Water	MFDGFIYRLCDKIVSICERIQNRIKTTPQKSWLKGYNKWKSRIN
Ga0222719_100263863	3300021964	Estuarine Water	MFDNFIYRLCDKIVSFCERIQNRIKNTPQKKWLKEYFKHKSHINKNDTE
Ga0222719_101290153	3300021964	Estuarine Water	MFDSIIYRLCDKIVSICERIQNSIKTTPQKSWLKGYNKWKSRINKNDTDNTGNTKTTNTK
Ga0222719_104768152	3300021964	Estuarine Water	MFDKIIYKICGWVVSICERIQNRIKNTPQKDWLNGYR
Ga0222719_107079752	3300021964	Estuarine Water	MFDGFIYRLCDKIVSICERIQNRIKTTPQKSWLKGYHKHKSRINKNEGD
Ga0212029_10322172	3300022063	Aqueous	MFDNFIYRLCDKIVSFCERIQNRIKNTPQKKWLKEYFKHKSRINKNDTE
Ga0212021_10147361	3300022068	Aqueous	MFDEFIYRLCDKIVTICESIKSRIKTTSNKDWIKGYRKHKSRINKNDTE
Ga0212021_10776103	3300022068	Aqueous	MFDKFIYRLCDKIVSICESIQSRIKTTNQKDWLKGYNKWKSRINNNDAD
Ga0212031_10733032	3300022176	Aqueous	MFDKIIYKICDKVVSICESIKGRIKTTPQKDWLKSYRKWKSRINNNEGD
Ga0196899_10574351	3300022187	Aqueous	MFDEFIYRLCDKIVTICESIQSRIKSTNDKDWIKGYRKWKSHINKNDTE
Ga0255780_103208412	3300022935	Salt Marsh	LCDKIVSICESIQSRIKTTNQKDWLNGYNKWKSRINKNDTE
Ga0255778_102510242	3300023084	Salt Marsh	MFDKFMYRLCDKIVSICESIQSRIKTTNQKDWLNGYNKWKSRINKNDT
Ga0255778_104526712	3300023084	Salt Marsh	TYSNIMFDKFIYRLCDKIVSICESIQSRIKTTNQKDWLNGYNKWKSRINKNDTE
Ga0208303_10707672	3300025543	Aqueous	MFDNFIYRLCDKIVSFCERIQNRIKNTPQKKWLKEYFKHKSRINKNEGD
Ga0209194_10602732	3300025632	Pelagic Marine	KIIYKICGWVVSICERIQNRIKNTPQKDWLNGYRKWKRSINKNEGD
Ga0208161_10029368	3300025646	Aqueous	MFDEFIYRLCDKIVSICESIKSRIKTTSNKDWIKSYRKWKSHINKNDTE
Ga0208161_10288205	3300025646	Aqueous	IIYKICDKVVSICESIKGRIKTTPQKDWLKSYRKWKSRINNNEGD
Ga0208795_10022701	3300025655	Aqueous	MFDNFIYRLCDKIVSFCERIQNRIKNTPQKKWLKEYF
Ga0208150_11498472	3300025751	Aqueous	XYISINMFDNFIYRLCDKIVSFCERIQNRIKNTPQKKWLKEYFKHKSRINKNDTE
Ga0208899_10026477	3300025759	Aqueous	MFDNFIYRLCDKIVSFCERIQNRIKNTPQKKWLKEYFKHKSLINKNDTE
Ga0208899_10029012	3300025759	Aqueous	MFDNFIYRLCDKIVSICESIKSRIKTTPQKSWLKGYNEWKSRINKNDTE
Ga0208767_10285146	3300025769	Aqueous	MFDEFIYRLCDKIVTICEKVQDRIKNTPHKKWLKGYHKHKSRINKNDTE
Ga0208425_100139116	3300025803	Aqueous	MFDKFIYRLCDKIVSICESIQSRIKTTNQKDWLKGYNKWKSRINK
Ga0208543_10440161	3300025810	Aqueous	LCDKIVSICERIQNRIKNTPQKDWLKGYHKWKRSINKNEGE
Ga0209193_10142362	3300025816	Pelagic Marine	MFDKIIYKICGRVVSICERIQNRIKNTPQKDWLNGYRKWKRSINKNEGD
Ga0208917_12173101	3300025840	Aqueous	MFDKFMYRLCDKIVSICESIQSRIKTTNQKDWLNG
Ga0208645_11106902	3300025853	Aqueous	DKFIYRLCDKIVSICESIQSRIKTTNQKDWLNGYNKWKSRINKNDTE
Ga0208645_11152352	3300025853	Aqueous	MFDKFIYRLCDKIVSICESIQSRIKTTNQKDWLNGYNKWKSRIN
Ga0208644_10654232	3300025889	Aqueous	MFDSIIYKLCDKIVSICERIQNRIKNTPQKDWLKGYHKWKRSINKNEGD
Ga0209955_10248661	3300026123	Water	RVVSICERIQNRIKNTPQKDWLNGYRKWKRSINKNEGD
Ga0209962_10033295	3300026125	Water	FPLKIVSICERIQNRIKNTPQKDWLNGYRKWKRSINKNEGD
Ga0209961_10031121	3300026130	Water	IYKICGWVVSICERIQNRIKNTPQKDWLNGYRKWKRSINKNEGD
Ga0209951_10158763	3300026138	Pond Water	MFDSIIYKLCDKIVSICEKIQTRIKDTPQKDWLNGYRK
Ga0209932_10603002	3300026183	Pond Water	MFDNFIYRLCDKIVTICEKVQDRIKNTPHKKWLKG
Ga0209932_11354312	3300026183	Pond Water	MFDSIVYKLCDKIVSVCEKIQTRIKDTPQKDWLKGYRKWKSRINKNEGD

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F056984

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences