Metagenome Family F057478

Basic Information
Family ID	F057478
Family Type	Metagenome
Number of Sequences	136
Average Sequence Length	50 residues
Representative Sequence	MLQWIRSVVYTVLLFLVTGFFGVIVLVSALLPLSIEQRYVIPRSWGLFLTWL
Number of Associated Samples	88
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	55.15 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	91.91 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Most Common Taxonomy
Group	Unclassified (61.765 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (36.029 % of family members)
Environment Ontology (ENVO)	Unclassified (41.176 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (52.941 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 53.75% β-sheet: 0.00% Coil/Unstructured: 46.25%
Feature Viewer

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Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF05746	DALR_1	94.12
PF02091	tRNA-synt_2e	2.21
PF12169	DNA_pol3_gamma3	0.74
PF14346	DUF4398	0.74
PF13511	DUF4124	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG0018	Arginyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	94.12
COG0751	Glycyl-tRNA synthetase, beta subunit	Translation, ribosomal structure and biogenesis [J]	94.12
COG0752	Glycyl-tRNA synthetase, alpha subunit	Translation, ribosomal structure and biogenesis [J]	2.21

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.76 %
All Organisms	root	All Organisms	38.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.76 %
cellular organisms	root	All Organisms → cellular organisms	38.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.76 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	38.24 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.76 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	27.94 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.76 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	17.65 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.76 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	11.03 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.76 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	11.03 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.68 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_107095622	Not Available	711	Open in IMG/M
3300003858\|Ga0031656_10266064	Not Available	581	Open in IMG/M
3300004050\|Ga0055491_10086653	Not Available	758	Open in IMG/M
3300004051\|Ga0055492_10051813	All Organisms → cellular organisms → Bacteria → Proteobacteria	823	Open in IMG/M
3300004146\|Ga0055495_10049589	All Organisms → cellular organisms → Bacteria → Proteobacteria	872	Open in IMG/M
3300004155\|Ga0066600_10240751	All Organisms → cellular organisms → Bacteria → Proteobacteria	800	Open in IMG/M
3300004157\|Ga0062590_101348561	All Organisms → cellular organisms → Bacteria → Proteobacteria	706	Open in IMG/M
3300004481\|Ga0069718_10174740	All Organisms → cellular organisms → Bacteria → Proteobacteria	2748	Open in IMG/M
3300004481\|Ga0069718_16317378	All Organisms → cellular organisms → Bacteria → Proteobacteria	1260	Open in IMG/M
3300004643\|Ga0062591_102358960	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300004779\|Ga0062380_10420234	Not Available	584	Open in IMG/M
3300005833\|Ga0074472_10225194	Not Available	1434	Open in IMG/M
3300006224\|Ga0079037_100092431	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2517	Open in IMG/M
3300006224\|Ga0079037_100101097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2422	Open in IMG/M
3300006224\|Ga0079037_100317991	Not Available	1449	Open in IMG/M
3300006224\|Ga0079037_100558935	Not Available	1105	Open in IMG/M
3300006237\|Ga0097621_100325012	All Organisms → cellular organisms → Bacteria → Proteobacteria	1363	Open in IMG/M
3300009075\|Ga0105090_10044787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2762	Open in IMG/M
3300009075\|Ga0105090_10052954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2536	Open in IMG/M
3300009078\|Ga0105106_10978829	Not Available	601	Open in IMG/M
3300009082\|Ga0105099_10577683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	687	Open in IMG/M
3300009085\|Ga0105103_10871636	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300009086\|Ga0102812_10810689	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300009091\|Ga0102851_12370732	Not Available	606	Open in IMG/M
3300009091\|Ga0102851_13084692	Not Available	535	Open in IMG/M
3300009111\|Ga0115026_10029221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2817	Open in IMG/M
3300009111\|Ga0115026_10902788	Not Available	699	Open in IMG/M
3300009131\|Ga0115027_10391151	Not Available	968	Open in IMG/M
3300009165\|Ga0105102_10929953	Not Available	503	Open in IMG/M
3300009166\|Ga0105100_10948422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	538	Open in IMG/M
3300009167\|Ga0113563_10806165	Not Available	1064	Open in IMG/M
3300009167\|Ga0113563_11210098	Not Available	880	Open in IMG/M
3300009169\|Ga0105097_10177265	Not Available	1173	Open in IMG/M
3300009170\|Ga0105096_10036349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2420	Open in IMG/M
3300009170\|Ga0105096_10056877	Not Available	1930	Open in IMG/M
3300009509\|Ga0123573_10241407	Not Available	1767	Open in IMG/M
3300009509\|Ga0123573_10398204	Not Available	1320	Open in IMG/M
3300009509\|Ga0123573_11098214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	742	Open in IMG/M
3300010412\|Ga0136852_10172962	Not Available	2174	Open in IMG/M
3300013315\|Ga0173609_10559969	Not Available	648	Open in IMG/M
3300014298\|Ga0075341_1127671	All Organisms → cellular organisms → Bacteria	523	Open in IMG/M
3300014298\|Ga0075341_1141029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	508	Open in IMG/M
3300014306\|Ga0075346_1167342	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300014969\|Ga0157376_12507423	Not Available	555	Open in IMG/M
3300020048\|Ga0207193_1750564	All Organisms → cellular organisms → Bacteria → Proteobacteria	636	Open in IMG/M
3300022223\|Ga0224501_10554370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	543	Open in IMG/M
3300025130\|Ga0209594_1093296	Not Available	917	Open in IMG/M
3300025563\|Ga0210112_1020446	Not Available	1446	Open in IMG/M
3300025901\|Ga0207688_11081013	All Organisms → cellular organisms → Bacteria → Acidobacteria	506	Open in IMG/M
3300026372\|Ga0256804_1012873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	753	Open in IMG/M
3300026463\|Ga0256815_1005815	Not Available	1100	Open in IMG/M
3300026476\|Ga0256808_1067561	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	541	Open in IMG/M
3300027693\|Ga0209704_1090209	Not Available	866	Open in IMG/M
3300027715\|Ga0208665_10283917	Not Available	519	Open in IMG/M
3300027719\|Ga0209467_1307664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	525	Open in IMG/M
3300027721\|Ga0209492_1013016	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2801	Open in IMG/M
3300027721\|Ga0209492_1039742	Not Available	1652	Open in IMG/M
3300027778\|Ga0209464_10358098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	535	Open in IMG/M
3300027871\|Ga0209397_10459967	Not Available	629	Open in IMG/M
3300027885\|Ga0209450_10632229	Not Available	781	Open in IMG/M
3300027885\|Ga0209450_11298503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	500	Open in IMG/M
3300027887\|Ga0208980_10339749	Not Available	869	Open in IMG/M
3300027890\|Ga0209496_10120842	Not Available	1156	Open in IMG/M
3300027890\|Ga0209496_10122435	Not Available	1150	Open in IMG/M
3300027899\|Ga0209668_10462960	Not Available	837	Open in IMG/M
3300027972\|Ga0209079_10124129	Not Available	884	Open in IMG/M
3300027975\|Ga0209391_10182033	Not Available	881	Open in IMG/M
3300031746\|Ga0315293_11112197	Not Available	555	Open in IMG/M
3300031858\|Ga0310892_10239287	Not Available	1114	Open in IMG/M
3300031997\|Ga0315278_10845692	Not Available	921	Open in IMG/M
3300032004\|Ga0307414_11581923	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300032126\|Ga0307415_100862131	Not Available	832	Open in IMG/M
3300032143\|Ga0315292_10000629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	17057	Open in IMG/M
3300032143\|Ga0315292_11127947	Not Available	647	Open in IMG/M
3300032164\|Ga0315283_12445113	Not Available	507	Open in IMG/M
3300032397\|Ga0315287_11479395	Not Available	769	Open in IMG/M
3300032401\|Ga0315275_11950325	Not Available	620	Open in IMG/M
3300032401\|Ga0315275_12222496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	573	Open in IMG/M
3300032516\|Ga0315273_10528192	Not Available	1576	Open in IMG/M
3300033408\|Ga0316605_10929494	Not Available	832	Open in IMG/M
3300033408\|Ga0316605_10958559	Not Available	820	Open in IMG/M
3300033408\|Ga0316605_11185580	Not Available	737	Open in IMG/M
3300033408\|Ga0316605_11231447	Not Available	723	Open in IMG/M
3300033408\|Ga0316605_12424906	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300033413\|Ga0316603_10798170	Not Available	886	Open in IMG/M
3300033413\|Ga0316603_10855993	Not Available	855	Open in IMG/M
3300033413\|Ga0316603_12264860	All Organisms → cellular organisms → Bacteria	512	Open in IMG/M
3300033414\|Ga0316619_10789081	Not Available	810	Open in IMG/M
3300033414\|Ga0316619_11150322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	683	Open in IMG/M
3300033414\|Ga0316619_11679356	Not Available	573	Open in IMG/M
3300033414\|Ga0316619_11971186	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300033416\|Ga0316622_101464031	Not Available	798	Open in IMG/M
3300033416\|Ga0316622_102033290	Not Available	667	Open in IMG/M
3300033416\|Ga0316622_102622967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	579	Open in IMG/M
3300033416\|Ga0316622_103009035	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	537	Open in IMG/M
3300033418\|Ga0316625_100714104	Not Available	843	Open in IMG/M
3300033418\|Ga0316625_100720807	Not Available	840	Open in IMG/M
3300033418\|Ga0316625_100798797	Not Available	809	Open in IMG/M
3300033418\|Ga0316625_100826183	Not Available	799	Open in IMG/M
3300033418\|Ga0316625_100937871	Not Available	762	Open in IMG/M
3300033418\|Ga0316625_101024839	Not Available	737	Open in IMG/M
3300033419\|Ga0316601_100619076	Not Available	1054	Open in IMG/M
3300033419\|Ga0316601_101636660	Not Available	649	Open in IMG/M
3300033419\|Ga0316601_102524710	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300033434\|Ga0316613_10128372	Not Available	1578	Open in IMG/M
3300033434\|Ga0316613_10179051	Not Available	1356	Open in IMG/M
3300033481\|Ga0316600_11212218	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	536	Open in IMG/M
3300033482\|Ga0316627_101143349	Not Available	766	Open in IMG/M
3300033482\|Ga0316627_102704268	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300033483\|Ga0316629_10681027	Not Available	775	Open in IMG/M
3300033483\|Ga0316629_10899197	Not Available	688	Open in IMG/M
3300033485\|Ga0316626_10180099	Not Available	1645	Open in IMG/M
3300033485\|Ga0316626_10486264	Not Available	1048	Open in IMG/M
3300033485\|Ga0316626_12192688	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300033486\|Ga0316624_10596940	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	960	Open in IMG/M
3300033487\|Ga0316630_10418576	Not Available	1074	Open in IMG/M
3300033487\|Ga0316630_10521090	Not Available	977	Open in IMG/M
3300033487\|Ga0316630_11854851	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300033488\|Ga0316621_10022491	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2755	Open in IMG/M
3300033488\|Ga0316621_10149930	Not Available	1394	Open in IMG/M
3300033488\|Ga0316621_10460645	Not Available	880	Open in IMG/M
3300033488\|Ga0316621_10956009	Not Available	636	Open in IMG/M
3300033493\|Ga0316631_10081533	Not Available	1112	Open in IMG/M
3300033493\|Ga0316631_10156943	Not Available	849	Open in IMG/M
3300033513\|Ga0316628_101596937	Not Available	869	Open in IMG/M
3300033521\|Ga0316616_102306628	Not Available	718	Open in IMG/M
3300033557\|Ga0316617_100215385	Not Available	1543	Open in IMG/M
3300033557\|Ga0316617_101806076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	624	Open in IMG/M
3300033759\|Ga0314869_012448	Not Available	568	Open in IMG/M
3300034053\|Ga0373890_085555	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300034054\|Ga0373891_040277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	729	Open in IMG/M
3300034055\|Ga0373892_008855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1153	Open in IMG/M
3300034056\|Ga0373893_023393	Not Available	771	Open in IMG/M
3300034077\|Ga0373899_030672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	632	Open in IMG/M
3300034080\|Ga0373897_088123	Not Available	609	Open in IMG/M
3300034420\|Ga0373918_0040457	Not Available	1121	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.44%
Engineered	Engineered	5.88%
Host-Associated	Host-Associated	3.68%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	48.53%
Terrestrial	Environmental → Terrestrial	41.91%
Bioremediation	Engineered → Bioremediation	5.15%
Plants	Host-Associated → Plants	3.68%
Wastewater	Engineered → Wastewater	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.18%
Freshwater	Environmental → Aquatic → Freshwater	38.97%
Marine	Environmental → Aquatic → Marine	5.88%
Metal	Engineered → Bioremediation → Metal	5.15%
Sediment	Environmental → Aquatic → Sediment	3.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.21%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	0.74%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.74%
Roots	Host-Associated → Plants → Roots	0.74%
Industrial Wastewater	Engineered → Wastewater → Industrial Wastewater	0.74%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	38.97%
Sediment	Environmental → Aquatic → Freshwater → Sediment	16.91%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	9.56%
Lake	Environmental → Aquatic → Freshwater → Lake	7.35%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	5.15%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.68%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	2.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.21%
Pond	Environmental → Aquatic → Freshwater → Pond	1.47%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.74%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.74%
Sediment	Environmental → Aquatic → Marine → Sediment	0.74%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	0.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.74%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.74%
Mine Water	Engineered → Wastewater → Industrial Wastewater → Mine Water	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	38.97%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	16.91%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	7.35%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	7.35%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	5.15%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.68%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.94%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.21%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.21%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	1.47%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	1.47%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.47%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.74%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.74%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.74%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.74%
Unclassified	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	36.03%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	11.03%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	6.62%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	5.88%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	5.15%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	4.41%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.94%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.94%
Mangrove Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Mangrove Sediment	2.94%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	2.21%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.21%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.47%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	1.47%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	1.47%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.47%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.47%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.74%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.74%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.74%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.74%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.74%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.74%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Sediment	Engineered → Wastewater → Industrial Wastewater → Mine Water → Unclassified → Sediment	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300003858	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI	Environmental	Open in IMG/M
3300004050	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLA_D2	Environmental	Open in IMG/M
3300004051	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D2	Environmental	Open in IMG/M
3300004146	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D2	Environmental	Open in IMG/M
3300004155	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Low cellulose week 11	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005833	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009086	Estuarine microbial communities from the Columbia River estuary - Flood tide ETM metaG S.713	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009509	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_11	Environmental	Open in IMG/M
3300010412	Mangrove sediment microbial communities from Mai Po Nature Reserve Marshes in Hong Kong, China - Maipo_10	Environmental	Open in IMG/M
3300013315	Sediment microbial communities from Acid Mine Drainage holding pond in Pittsburgh, PA, USA - 1B	Engineered	Open in IMG/M
3300014298	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_ThreeSqB_D1	Environmental	Open in IMG/M
3300014306	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D1	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300022223	Sediment microbial communities from San Francisco Bay, California, United States - SF_Oct11_sed_USGS_8_1	Environmental	Open in IMG/M
3300025130	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Crystal Spring (SPAdes)	Environmental	Open in IMG/M
3300025563	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Joice_ThreeSqC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300026372	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 F5	Environmental	Open in IMG/M
3300026463	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS6	Environmental	Open in IMG/M
3300026476	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 PR6	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental	Open in IMG/M
3300027719	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - High cellulose week 11 (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)	Environmental	Open in IMG/M
3300027871	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027890	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1 (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027975	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300031746	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_20	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032004	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3	Host-Associated	Open in IMG/M
3300032126	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2	Host-Associated	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental	Open in IMG/M
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental	Open in IMG/M
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033486	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_N3_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental	Open in IMG/M
3300033493	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D3_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033759	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_B	Environmental	Open in IMG/M
3300034053	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.3	Engineered	Open in IMG/M
3300034054	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A3A4.1	Engineered	Open in IMG/M
3300034055	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A3A4.2	Engineered	Open in IMG/M
3300034056	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A3A4.3	Engineered	Open in IMG/M
3300034077	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.3	Engineered	Open in IMG/M
3300034080	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.1	Engineered	Open in IMG/M
3300034420	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A4.1	Engineered	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1070956222	3300001213	Wetland	MLQWIRSIVYTVLLFLATGFFGVVVLIGACLPLSLEQRYAIPRAWGRFLTWLAGVVCGLK
Ga0031656_102660642	3300003858	Freshwater Lake Sediment	MLQWIRSVIYTLLLFAVTGIFGVIVLVSALLPLSIEQRYVIPRSWGLLLTWLAK
Ga0055491_100866531	3300004050	Natural And Restored Wetlands	MLQWVRSLVYTVLLFACTLAFGVAGLISALLPLTIEQRYVIPR
Ga0055492_100518131	3300004051	Natural And Restored Wetlands	MQWVRSLLFTSLLFLTTMGFGVVVLLSALLPLSIEQRYVIPRNWGRFECWLAK
Ga0055495_100495892	3300004146	Natural And Restored Wetlands	MLQWVRSLVYTTLLFACTMAFGVAVLVSAVLPLTIEQRYVIPRNWGLFHTWLAKVICGL
Ga0066600_102407512	3300004155	Freshwater	MLQWVRSVLYTVLLFLGTGFFGVIVLLSALLPLSIEQRYVIP
Ga0062590_1013485612	3300004157	Soil	MQWLRSLLFTVLLFVVTAVFGVIVLVAAMLPLKIEQRYAIPRAWGLVLTALAGVICG
Ga0069718_101747403	3300004481	Sediment	MLQWVRSVLYTVLLFLGTGFFGVIVLLSALLPLSIEQRYVIPRAWGLSLTW
Ga0069718_163173782	3300004481	Sediment	MLQWIRSVIYTVLLFLGTGFFGVIVLLSALLPLSIEQRYVIPRAWGLSLTW
Ga0062591_1023589602	3300004643	Soil	MQLLRSAIFTVLLFLITAIFGVIVLIGAMLPLSLEQRYAIPRTWGLLLTWLA
Ga0062380_104202341	3300004779	Wetland Sediment	MQAIRSLIYTTLMALITGVTGVIVILSALLPLTIKQRYVIPRTWGLFLTWLA
Ga0074472_102251941	3300005833	Sediment (Intertidal)	MQAIRSLIYTTLMALITGVTGVIVILSALLPLTIKQRY
Ga0079037_1000924311	3300006224	Freshwater Wetlands	MVLLRSLLYTTLLFLVTLVFGVIVLASALLPLTIEQRYVIPRAWGRFLTWLAGAICGLR
Ga0079037_1001010973	3300006224	Freshwater Wetlands	MVLLRSLLYTTLLFLVTLLFGVIVLGSALLPLTIEQRYVIPRAWGRFLTG
Ga0079037_1003179912	3300006224	Freshwater Wetlands	MLQWIRSVIYTVLLFLVTGVFGVIVLLSALLPLSIE
Ga0079037_1005589352	3300006224	Freshwater Wetlands	MLQWVRSLVYTVLLFVGTMTFGVVVLISALLPLSIEQRYVIPRYWGLFHTWLA
Ga0097621_1003250122	3300006237	Miscanthus Rhizosphere	MQWLRSLVFTVLLFLVTAVFGVIVLVAAALPLRIERRYAIPRAWGLVLTWLAGVV
Ga0105090_100447871	3300009075	Freshwater Sediment	MLQWIRSVIYTVLLFLGTGFFGVIVLLSALLPLSIEQRYVIPR
Ga0105090_100529541	3300009075	Freshwater Sediment	MLQWVRSLIYTVLLFVGTMTFGVVVLVSALLPLGIEQRYVIPRNWGL
Ga0105106_109788291	3300009078	Freshwater Sediment	MLQWIRSVVYTVLLFLVTGFFGVIVLVSALLPLSIEQRYVIPRSWGLFLTWL
Ga0105099_105776831	3300009082	Freshwater Sediment	MRWVRSLVFTSLLFVTTIAFGVVVLLSALLPLSIEQRYVIPRSWGLFECWLAKV
Ga0105103_108716362	3300009085	Freshwater Sediment	MILLRSLLYTTLLFLGTVGFGVIVLISALLPLTIEQRYVI
Ga0102812_108106892	3300009086	Estuarine	MLQWVRSVIYTVLLFLVTGVFGVIVLVSALLPLSLEQRYVIPRSWGLF
Ga0102851_123707322	3300009091	Freshwater Wetlands	MIQWVRSLVYTALLFACTMAFGVAVLVSAVLPLTIEQRYVIPRNWG
Ga0102851_130846922	3300009091	Freshwater Wetlands	MLQWIRSVLYTVLLFLGTGVFGVIVLVSALLPLSIEQ
Ga0115026_100292213	3300009111	Wetland	MLQWIRSLLYTTLLFLTTMAFGVVVLVSALLPLSIEQRYVIPRTWGRFECWLASVICGIGYVVEGQQNLPDE
Ga0115026_109027882	3300009111	Wetland	VQWVRSLVYTTLLFATTIAFGVVVLASALLPLSIEQ
Ga0115027_103911512	3300009131	Wetland	MLQWIRSLVYTALLFAGTMAFGVVVLVSALLPLTIEQR
Ga0105102_109299531	3300009165	Freshwater Sediment	MQWVRSLLFTSLLFVTTMAFGVVVLLSALLPLSIEQRYVIPRYWG
Ga0105100_109484223	3300009166	Freshwater Sediment	MLQWVRSVIYTVLLFAVTGVFGVIVLVSAVLPLSIEQRYVIPRTWGLFLTWLAQVICGLGYTIEG
Ga0113563_108061651	3300009167	Freshwater Wetlands	MLQWIRSLVYTTLLFACSMAFGVVVLASALLPLTIEQRYV
Ga0113563_112100981	3300009167	Freshwater Wetlands	MLQWVRSLVYTVLLFAGTMTFGVVVLISALLPLSIEQRYVIPRY
Ga0105097_101772652	3300009169	Freshwater Sediment	MLQWVRSVIYTVLLFLVTGVFGVIVLVSALLPLSLEQRYVIPRSWGLFLT
Ga0105096_100363493	3300009170	Freshwater Sediment	MQWVRSLLFTGLLFITTMAFGVVVLLSALLPLSIEQRYVIPRSWGLFECW
Ga0105096_100568771	3300009170	Freshwater Sediment	MLQWIRSLLYTTLLFLTTMAFGVVVLVSALLPLTIKQRYVIPRTWGRFECWLASVICGIGYVVEGQQNLP
Ga0123573_102414071	3300009509	Mangrove Sediment	MLQWVRSLVFTALLFLTTLAFGVAVLVSALLPLTIEQ
Ga0123573_103982042	3300009509	Mangrove Sediment	MLQLFRSLVYTVLLFACTMAFGVVVLISSLLPLTIEQRYV
Ga0123573_110982141	3300009509	Mangrove Sediment	MLQWVRSLVYTVLLFACTMAFGVAVLISSLLPLTIEQRYVIPRNWGLFHTW
Ga0136852_101729621	3300010412	Mangrove Sediment	MQWVRSLVFTTLLFLTTLAFGVVVLVSALLPLSIDQRYVIPRTW
Ga0173609_105599691	3300013315	Sediment	LLQILRSVIYTTLMFLATGVVGVIVLLSALLPLTIEQRY
Ga0075341_11276712	3300014298	Natural And Restored Wetlands	MQAFRSLVYTTLFILVTAFFGVVVLISALLPLSIQQRYVI
Ga0075341_11410291	3300014298	Natural And Restored Wetlands	MLQWVRSLVYTVLLFAGTMAFGVVVLVSALLPLTI
Ga0075346_11673422	3300014306	Natural And Restored Wetlands	MQAFRSLVYTTLFILVTAFFGVVVLISALLPLSIKQRYVIPRTWGLLLTWLAGVVCGLKY
Ga0157376_125074231	3300014969	Miscanthus Rhizosphere	MQWLRSLVFTVLLFLVTAVFGVIVLVAAALPLRIARRYAIPRAWGLVLTWLAGV
Ga0207193_17505642	3300020048	Freshwater Lake Sediment	MQAIRSLVYTTLMALVTGVTAVIVILSALLPLTIKQRYVIPRTWGLFLTWLAGAICGRIPEQEVVGQQ
Ga0224501_105543701	3300022223	Sediment	MLQWVRSLVYTVLLFAGTLTFGVIVLISALLPLTIEQRYVIPR
Ga0209594_10932961	3300025130	Groundwater	LRLLQWIRSVIFTVTLFAVTGIFGVIVLVSAVLPLGIEQ
Ga0210112_10204461	3300025563	Natural And Restored Wetlands	MQALRSLIYTTLFFLVTGFFGVVVLISALLPLSIQQRYVIPRTWGLFLTWLAGAVCGL
Ga0207688_110810131	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MQWLRSLVFTVLLFLVTAVFGVIVLVAAALPLRIERRYAIPRAWGLVL
Ga0256804_10128732	3300026372	Sediment	MQWIRSLVFTTLLFIGTLAFGVAVLVSALLPLSIEQRYVVPRSWGLLLTWLAKVI
Ga0256815_10058152	3300026463	Sediment	MQWIRSLVFTTLLFIGTLAFGVAVLVSALLPLSIEQRYVVPRSWGLLLTWLA
Ga0256808_10675611	3300026476	Sediment	MQWIRSLVFTTLLFIGTLAFGVAVLVSALLPLSIE
Ga0209704_10902092	3300027693	Freshwater Sediment	MLQWIRSLLYTTLLFLTTMAFGVVVLVSALLPLTIKQRYVIPRTWGRFECWLASVICGIG
Ga0208665_102839172	3300027715	Deep Subsurface	MLQWVRSVIYTVLLFLVTGFFGVIVLLSALLPLSIEQRYVIP
Ga0209467_13076642	3300027719	Freshwater	MLQWIRSVIYTVLLFLVTGFFGVIVLVSALLPLSIEQ
Ga0209492_10130163	3300027721	Freshwater Sediment	MRWVRSLVFTSLLFVTTIAFGVVVLLSALLPLSIEQRYVIPRYWGLFECWL
Ga0209492_10397422	3300027721	Freshwater Sediment	MQWVRSLLFTSLLFVTTMAFGVVVLLSALLPLSIEQRYVIPRYWGLFECWL
Ga0209464_103580982	3300027778	Wetland Sediment	MQALRSLIYTTLFILVTAVFGIVVLISALMPLSIEQRYVIPRTWGLFL
Ga0209397_104599672	3300027871	Wetland	VQWVRSLVYTTLLFATTIACGVVVLASALLPLSIEQRY
Ga0209450_106322291	3300027885	Freshwater Lake Sediment	MLQWVRSLVYTALLFACTMAFGVAVLVSAVLPLTIEQRYVIPRNW
Ga0209450_112985032	3300027885	Freshwater Lake Sediment	VQWVRSLVYTTLLFVTTIAFGIVVLVSALLPLSIEQRYVIPR
Ga0208980_103397492	3300027887	Wetland	MQALRSLLYTTLFILVTAFFGIVVLLSALLSALLPLSIEQRYVIPRYWGLS
Ga0209496_101208421	3300027890	Wetland	MLQWIRSLVYTALLFAGTMAFGVVVLVSALLPLTIEQRYVIPRYWGLFHT
Ga0209496_101224351	3300027890	Wetland	MVLLRSLLYTTLLFLVTLLFGVIVLGSALLPLTIEQRYVIPRAWGRFLTRLA
Ga0209668_104629601	3300027899	Freshwater Lake Sediment	MQWIRSLLYTTLLFACTMAFGVAVLVSALLPLTIEQRYVIP
Ga0209079_101241291	3300027972	Freshwater Sediment	MLQWIRSVIYTVLLFAGTIVFGVIVLVSAVLPLSIQQRY
Ga0209391_101820331	3300027975	Freshwater Sediment	MLQWVRSVIYTVLLFLVTGVFGVIVLVSALLPLSLEQRYVIPRSWGLFLTW
Ga0315293_111121972	3300031746	Sediment	MLQWIRSVIYTVLLFLGTGVFGVIVLLSALLPLTIEQRYV
Ga0310892_102392871	3300031858	Soil	MQWVRSLAFTGLMFLTTAVFGVIVLVAACLPLSLEQRYAIPRSWGRLLTWL
Ga0315278_108456922	3300031997	Sediment	MLQWIRSVIYTVLLFLGTGFFGVIVLLSALLPLSIEQRYVIPRAWGLSLTWLAK
Ga0307414_115819232	3300032004	Rhizosphere	MGNILQLIRSAIFTVLLFLVTGIFGVIVLIGAALPLTLEQRYAIPRTWGLFLTWLAGVVCGLHYTIEGR
Ga0307415_1008621312	3300032126	Rhizosphere	MQWVRSLVFTGLMFLTTAFFGVVVLVAACLPLSIEQRYAVPRAWGRLLTW
Ga0315292_1000062914	3300032143	Sediment	MLQWIRSVIYTVLLFLGTGVFGVIVLLSALLPLTIEQRYVVPRAWGLSLTWLAKVVCG
Ga0315292_111279471	3300032143	Sediment	MLQWIRSVIYTVLLFLGTGFFGVIVLLSALLPLSIEQRYVIPRAWGLSLTWL
Ga0315283_124451131	3300032164	Sediment	MQAIRSLIYTTLMALVTGVTGVVVILSSLLPLTIEQRYVIPRTWGLFLTWLAGAICGLKYTV
Ga0315287_114793951	3300032397	Sediment	MQVIRSLIYTTLMALITGVTGVIVILSALLPLTIKQRYVIPRT
Ga0315275_119503252	3300032401	Sediment	MQYVRSLVYFALFVATTAVFGVIVLVSALLPLSIEQRYVIPRAWGLFLTWLAGVVCGLTYTVE
Ga0315275_122224962	3300032401	Sediment	MLQWIRSVIYTVLLFLGTGVFGVIVLLSALLPLTIEQRYVVPRAWGLSLTWLAKMVCGLGYVI
Ga0315273_105281921	3300032516	Sediment	MGQWIRSLVYTVLLFAVTGVFGVIVLVSALLPLSIEQRYVIPRSWGLLLTWLAKVICGL
Ga0316605_109294942	3300033408	Soil	MLQWVRSLVYTVLLFAGTMTFGVVVLISALLPLSIEQRYVIPRYWGLFHTWLAGVVCGLDYKVEG
Ga0316605_109585592	3300033408	Soil	MQWVRSLVFTSLLFITTMAFGVVVLLSALLPLSIEQRYVIPRSWGLFECWLAKVVC
Ga0316605_111855802	3300033408	Soil	MLQWIRSLLYTTLLFLTTMAFGVVVLVSALLPLSIEQRYVIPRTWGRFECWLASVICGIGYVVEGQQNLPD
Ga0316605_112314471	3300033408	Soil	MLQWVRSIVYTLLLFLVTGFFGVVVLIGACLPLTLEQRYV
Ga0316605_124249061	3300033408	Soil	MQWIRSLVFTTLLFVTTMAFGVVVLVSALLPLTIE
Ga0316603_107981702	3300033413	Soil	VQWVRSLVYTTLLFATTIAFGVVVLASALLPLSIEQRYVIPRYWGLFETWLAKVVCGI
Ga0316603_108559932	3300033413	Soil	MLQWVRSLVYTVLLFAGTMAFGVVVLVSALLPLSIEQRYVIPRYWGLFHTWLASVVCGLDYQV
Ga0316603_122648602	3300033413	Soil	VQWIRSLVYTTLLFATTIAFGVVVLASALLPLSIEQRYVI
Ga0316619_107890812	3300033414	Soil	MLQWVRSLVYTVLLFAGTMTFGVIVLISALLPLSIEQRYVIPRYWGLFHTWLAGVICGLD
Ga0316619_111503221	3300033414	Soil	MQAIRSLVYTTLMALITGVFGVIVLISALLPLSIEQRYVIPRTWGLFLTWLAGAICGL
Ga0316619_116793562	3300033414	Soil	MQWFRSLLFTSLLFVTTMAFGVIVLVSALLPLSIEQRYVIPRY
Ga0316619_119711861	3300033414	Soil	MLQWIRSLLYTTLLFLTTMAFGVVVLVSALLPLSIEQRYVIPRTWGRFECWLASVICGIGYVV
Ga0316622_1014640312	3300033416	Soil	MLQWVRSVIYTVLLFLVTGVFGVIVLVSALLPLSLEQRYVIPRSWGLFLTWLAK
Ga0316622_1020332902	3300033416	Soil	MLQWVRSLIYTVLLFAGTMAFGVVVLVSALLPLSIEQRYVIPRCWGLFHTWLASVVCALDYQVEG
Ga0316622_1026229672	3300033416	Soil	MIQWVRSLVYTALLFACTMAFGVAVLVSAVLPLTIEQRYVIPRNWGLFHTWLA
Ga0316622_1030090352	3300033416	Soil	MLVAVRSLIYTTLMILTTGVFGVVVLVSALLPLTIE
Ga0316625_1007141041	3300033418	Soil	MQWVRSLLFTSLLFVTTMAFGVVVLLSALLPLSIE
Ga0316625_1007208071	3300033418	Soil	MQWIRSLLYTTLLFACTMAFGVAVLVSALLPLTIEQRYVI
Ga0316625_1007987972	3300033418	Soil	MLQWVRSLVYTVLLFVGTMSFGVVVLISALLPLSIEQRYVIPRYWGLFHTWL
Ga0316625_1008261832	3300033418	Soil	MLQWIRSLVYTTLLFACTMAFGVVVLVSALLPLTIEQRYVIPRNWG
Ga0316625_1009378712	3300033418	Soil	MVLLRSLLYTTLLFLVTLLFGVIVLGSALLPLTIEQRYVIPRAWGRFLTGLAGAIC
Ga0316625_1010248392	3300033418	Soil	MQWVRSLLFTSLLFLTTMAFGVVVLLSALLPLSIEQRYV
Ga0316601_1006190762	3300033419	Soil	MLQWVRSIVYTLLLFLVTGFFGVVVLIGACLPLTLEQRYVI
Ga0316601_1016366602	3300033419	Soil	MQWIRSLVFTTLLFVTTMAFGVVVLVSALLPLTIEQRYVIPRYWG
Ga0316601_1025247102	3300033419	Soil	MQAIRSLIYTTLMVLGTGVFGVIVLISALLPLTLEQRYVVPRTWGLFLTWLAGA
Ga0316613_101283722	3300033434	Soil	MQAIRSLIYTTLMVLGTGVFGVIVLISALLPLTLEQRYVVPRTWGLFLT
Ga0316613_101790512	3300033434	Soil	MLLLRSLLYTTLLFLGTIGFGVIVLVSALLPLTIEQRYVIPRAWGRCLTGLAG
Ga0316600_112122182	3300033481	Soil	MLQWIRSVIYTVLLFLGTGVFGVIVLVSALLPLSIEQRYVIPRAWG
Ga0316627_1011433491	3300033482	Soil	MLVAVRSLIYTTLMILTTGLFGVVVLVSALLPLTIEQRYAIPRTWGRFLTWLAGVICGLD
Ga0316627_1027042681	3300033482	Soil	MLQWIRSLLFTSLLFITTVAFGVIVLASALLPLSIEQRYVIPRTWGRFECWLA
Ga0316629_106810271	3300033483	Soil	MVLLRSLLYTTLLFLVTLLFGVIVLGSALLPLTIEQRYVIPRAWGRFLTGLAGAICGLRY
Ga0316629_108991971	3300033483	Soil	MLQWIRSVIYTVLLFLVTGVFGVIVLLSALLPLSIEQRYVIPRV
Ga0316626_101800991	3300033485	Soil	MQWIRSLLYTTLLFACTMAFGVAVLVSALLPLTIEQRYVIPRYWGLFHTWLA
Ga0316626_104862641	3300033485	Soil	MQAIRSLIYTTLMVLGTGVFGVIVLISALLPLTLEQRYVVPRTWGLFLTWLAGAV
Ga0316626_121926882	3300033485	Soil	MLQWIRSLLFTSLLFITTVAFGVIVLLSALLPLSIEQ
Ga0316624_105969401	3300033486	Soil	MQAIRSLIYTTLMALVTGVTAVIVILSALLPLTIKQRYVIPRTWGLFLTWLAGAICGLKY
Ga0316630_104185762	3300033487	Soil	MQWIRSLVFTGLLFLTTGFFGVIVLISALLPLTLEQRYAIPRAW
Ga0316630_105210901	3300033487	Soil	MQAIRSLIYTTLMALTTGVFGVIVLISALLPLSIEQRYVI
Ga0316630_118548512	3300033487	Soil	MLQWIRSLLYTTLLFLTTMAFGVVVLVSALLPLSIEQRYVIPRTWGRFECW
Ga0316621_100224913	3300033488	Soil	MLQWVRSLVYTVLLFACTMAFGVVVLISSLLPLSIEQRYVIPRYWGLFHTWLAKVVCGLDYQ
Ga0316621_101499302	3300033488	Soil	MVLLRSLLYTTLLFLVTLLFGVIVLGSALLPLTIEQRYVIPRAWGRFL
Ga0316621_104606451	3300033488	Soil	MQWIRSLAFTTLLFVTTMAFGVVVLVSALLPLTIEQRYVIPRYWGLFET
Ga0316621_109560091	3300033488	Soil	MLQWIRSIIYTLLLFLVTGVFGVIVLVGACLPLTLHQ
Ga0316631_100815332	3300033493	Soil	MLQWVRSLVYTVLLFACTMAFGVAVLISALLPLTIEQRYVIPRNWGLFHTWLAKVVC
Ga0316631_101569431	3300033493	Soil	MLQWIRSLVYTALLFAGTMAFGVVVLVSALLPLTIEQRYVIPRYWGLFHTWLAKEICGLGYVVEGQENL
Ga0316628_1015969371	3300033513	Soil	MVLLRSLLYTTLLFLVTLLFGVIVLGSALLPLTIEQRYVIPRAWGRFLTGLAGTICGLRY
Ga0316616_1023066281	3300033521	Soil	MQAIRSLIYTTLMALGTGVFGVIVLISALLPLTLEQRYVVP
Ga0316617_1002153851	3300033557	Soil	MQAIRSLIYTTLMALGTGVFGVIVLISALLPLTLEQRYVVPRTWGLFLTWLAG
Ga0316617_1018060762	3300033557	Soil	MQAIRSLVFTTLFVLTTAVFGVIVLVSALLPLSIEQRYVIPRTWGL
Ga0314869_012448_2_157	3300033759	Peatland	MQYLRSLVYTILFFATTLLFGFAVLVAAMLPLSLEQRYVIPRNWGRFLTWLA
Ga0373890_085555_1_105	3300034053	Sediment Slurry	MLQWIRSFIYTVLLFAGTMAFGVVVLVSALLPLTI
Ga0373891_040277_2_160	3300034054	Sediment Slurry	MLLLRSLLYTTLLFLGTLGFGVIVLISALLPLTIEQRYVIPRAWGRCLTGLAG
Ga0373892_008855_2_175	3300034055	Sediment Slurry	MLQWVRSVIYTVLLFLVTGVFGVIVLVSALLPLTIEQRYVIPRSWGLFLTWLARVVCG
Ga0373893_023393_1_174	3300034056	Sediment Slurry	MVVLRSIIFTVLMIFVTAGFAIAVLVSALLPLTIEQRYVIPRNWGLSLTWLAGKICGL
Ga0373899_030672_477_632	3300034077	Sediment Slurry	MVVLRSIIFTVLMIFVTAGFAIAVLVSALLPLTIEQRYVIPRNWGLSLTWLA
Ga0373897_088123_418_609	3300034080	Sediment Slurry	MLQWMRSVIYTVLLFLVTGVFGVIVLVSALLPLTIEQRYVIPRAWGRCLTGLAGTICGLRYVIE
Ga0373918_0040457_1_192	3300034420	Sediment Slurry	VQAIRSLIYTTLMALTTGVFGVIVLISALLPLSIEQRYVIPRTWGLFLTWLAGAICGLKYTVEG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F057478

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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