Metagenome / Metatranscriptome Family F057501

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057501
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	59 residues
Representative Sequence	IAATVAAAKAAGATVDRDVATVSIGGAPIKIAMLVDPQGNALEIMELPKALTHLPH
Number of Associated Samples	128
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.94 %
% of genes near scaffold ends (potentially truncated)	91.91 %
% of genes from short scaffolds (< 2000 bps)	92.65 %
Associated GOLD sequencing projects	118
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (89.706 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (8.823 % of family members)
Environment Ontology (ENVO)	Unclassified (38.235 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 10.71% β-sheet: 30.95% Coil/Unstructured: 58.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF12681	Glyoxalase_2	7.35
PF00005	ABC_tran	5.15
PF00903	Glyoxalase	4.41
PF02597	ThiS	4.41
PF13229	Beta_helix	3.68
PF00753	Lactamase_B	2.94
PF00593	TonB_dep_Rec	2.21
PF13858	DUF4199	2.21
PF00775	Dioxygenase_C	1.47
PF12704	MacB_PCD	1.47
PF09948	DUF2182	1.47
PF00550	PP-binding	0.74
PF00106	adh_short	0.74
PF00756	Esterase	0.74
PF03795	YCII	0.74
PF00583	Acetyltransf_1	0.74
PF11918	Peptidase_S41_N	0.74
PF05050	Methyltransf_21	0.74
PF06078	DUF937	0.74
PF03404	Mo-co_dimer	0.74
PF12098	DUF3574	0.74
PF07696	7TMR-DISMED2	0.74
PF07995	GSDH	0.74
PF02665	Nitrate_red_gam	0.74
PF01261	AP_endonuc_2	0.74
PF04828	GFA	0.74
PF14534	DUF4440	0.74
PF01872	RibD_C	0.74
PF02518	HATPase_c	0.74
PF12697	Abhydrolase_6	0.74
PF04116	FA_hydroxylase	0.74
PF01207	Dus	0.74
PF13442	Cytochrome_CBB3	0.74
PF01902	Diphthami_syn_2	0.74
PF16864	Dimerisation2	0.74
PF05685	Uma2	0.74
PF07519	Tannase	0.74
PF07885	Ion_trans_2	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG1977	Molybdopterin synthase sulfur carrier subunit MoaD	Coenzyme transport and metabolism [H]	4.41
COG2104	Sulfur carrier protein ThiS (thiamine biosynthesis)	Coenzyme transport and metabolism [H]	4.41
COG3485	Protocatechuate 3,4-dioxygenase beta subunit	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.47
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.74
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.74
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.74
COG2102	Diphthamide synthase (EF-2-diphthine--ammonia ligase)	Translation, ribosomal structure and biogenesis [J]	0.74
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.74
COG2181	Nitrate reductase gamma subunit	Energy production and conversion [C]	0.74
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.74
COG3000	Sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily	Lipid transport and metabolism [I]	0.74
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.74
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.74
COG4636	Endonuclease, Uma2 family (restriction endonuclease fold)	General function prediction only [R]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.71 %
Unclassified	root	N/A	10.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.71 %
Unclassified	root	N/A	10.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.71 %
Unclassified	root	N/A	10.29 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	38.97 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	17.65 %
Unclassified	root	N/A	10.29 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.21 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.74 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	28.68 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	14.71 %
Unclassified	root	N/A	10.29 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.41 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.21 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.74 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.71 %
Unclassified	root	N/A	10.29 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	6.62 %
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	5.15 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2.21 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.21 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.47 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	0.74 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.74 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.74 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.71 %
Unclassified	root	N/A	10.29 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	6.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.15 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.47 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.74 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.74 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.74 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.74 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.71 %
Unclassified	root	N/A	10.29 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	6.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.15 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	1.47 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.74 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	0.74 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.74 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.74 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	14.71 %
Unclassified	root	N/A	10.29 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	6.62 %
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	5.15 %
Sphingobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	1.47 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.74 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.74 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.74 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.74 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.74 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.74 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0415866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	602	Open in IMG/M
3300001977\|JGI24746J21847_1001442	All Organisms → cellular organisms → Bacteria	3785	Open in IMG/M
3300004157\|Ga0062590_102168754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	581	Open in IMG/M
3300004780\|Ga0062378_10221758	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300005183\|Ga0068993_10109420	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300005293\|Ga0065715_10203398	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300005328\|Ga0070676_10041865	All Organisms → cellular organisms → Bacteria	2657	Open in IMG/M
3300005333\|Ga0070677_10599788	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300005340\|Ga0070689_101446717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	622	Open in IMG/M
3300005353\|Ga0070669_100616832	All Organisms → cellular organisms → Bacteria	910	Open in IMG/M
3300005355\|Ga0070671_101708253	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	559	Open in IMG/M
3300005367\|Ga0070667_100268644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1529	Open in IMG/M
3300005367\|Ga0070667_100409446	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300005436\|Ga0070713_100669103	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	990	Open in IMG/M
3300005436\|Ga0070713_102042967	All Organisms → cellular organisms → Bacteria	556	Open in IMG/M
3300005444\|Ga0070694_100670791	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300005456\|Ga0070678_100508224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1064	Open in IMG/M
3300005530\|Ga0070679_101739441	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300005535\|Ga0070684_100334422	All Organisms → cellular organisms → Bacteria	1392	Open in IMG/M
3300005538\|Ga0070731_10976459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	561	Open in IMG/M
3300005543\|Ga0070672_100797643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	831	Open in IMG/M
3300005545\|Ga0070695_101003085	All Organisms → cellular organisms → Bacteria → Acidobacteria	679	Open in IMG/M
3300005549\|Ga0070704_101578781	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300005591\|Ga0070761_10547759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	717	Open in IMG/M
3300005718\|Ga0068866_10995118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	595	Open in IMG/M
3300005764\|Ga0066903_101504210	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1271	Open in IMG/M
3300005764\|Ga0066903_108471525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300005840\|Ga0068870_11080827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300005842\|Ga0068858_100148606	All Organisms → cellular organisms → Bacteria	2202	Open in IMG/M
3300005844\|Ga0068862_101659891	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	647	Open in IMG/M
3300005844\|Ga0068862_102085681	Not Available	578	Open in IMG/M
3300006194\|Ga0075427_10063969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300006847\|Ga0075431_100480474	All Organisms → cellular organisms → Bacteria	1235	Open in IMG/M
3300006853\|Ga0075420_100952407	All Organisms → cellular organisms → Bacteria	738	Open in IMG/M
3300006881\|Ga0068865_100263249	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300006894\|Ga0079215_10223443	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300006954\|Ga0079219_11033333	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300007004\|Ga0079218_12274280	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300009078\|Ga0105106_10600882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	788	Open in IMG/M
3300009095\|Ga0079224_100675468	All Organisms → cellular organisms → Bacteria → Acidobacteria	1480	Open in IMG/M
3300009101\|Ga0105247_10193937	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1361	Open in IMG/M
3300009174\|Ga0105241_10698572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	926	Open in IMG/M
3300009176\|Ga0105242_12207036	All Organisms → cellular organisms → Bacteria	596	Open in IMG/M
3300009545\|Ga0105237_10084529	All Organisms → cellular organisms → Bacteria → Proteobacteria	3164	Open in IMG/M
3300009553\|Ga0105249_12147313	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	631	Open in IMG/M
3300010046\|Ga0126384_11417651	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300010047\|Ga0126382_12342522	Not Available	517	Open in IMG/M
3300010359\|Ga0126376_11439545	All Organisms → cellular organisms → Bacteria → Acidobacteria	715	Open in IMG/M
3300010375\|Ga0105239_10155510	All Organisms → cellular organisms → Bacteria	2553	Open in IMG/M
3300010376\|Ga0126381_100033487	All Organisms → cellular organisms → Bacteria → Proteobacteria	6156	Open in IMG/M
3300010398\|Ga0126383_12858375	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300010399\|Ga0134127_10829182	All Organisms → cellular organisms → Bacteria → Proteobacteria	975	Open in IMG/M
3300010400\|Ga0134122_10756248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	921	Open in IMG/M
3300010400\|Ga0134122_11055798	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	801	Open in IMG/M
3300010401\|Ga0134121_11822881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	636	Open in IMG/M
3300011433\|Ga0137443_1063713	Not Available	1021	Open in IMG/M
3300012129\|Ga0137345_1043165	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	578	Open in IMG/M
3300012172\|Ga0137320_1136373	All Organisms → cellular organisms → Bacteria → Proteobacteria	521	Open in IMG/M
3300012212\|Ga0150985_102279303	Not Available	565	Open in IMG/M
3300012227\|Ga0137449_1143618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	523	Open in IMG/M
3300012228\|Ga0137459_1064677	Not Available	1046	Open in IMG/M
3300012232\|Ga0137435_1079852	All Organisms → cellular organisms → Bacteria → Proteobacteria	974	Open in IMG/M
3300012511\|Ga0157332_1078467	Not Available	528	Open in IMG/M
3300012512\|Ga0157327_1009050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	907	Open in IMG/M
3300012899\|Ga0157299_10061331	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	875	Open in IMG/M
3300012907\|Ga0157283_10114523	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300012944\|Ga0137410_10996357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	713	Open in IMG/M
3300012948\|Ga0126375_10222766	All Organisms → cellular organisms → Bacteria	1256	Open in IMG/M
3300012987\|Ga0164307_11444538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	581	Open in IMG/M
3300013102\|Ga0157371_10990161	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300013306\|Ga0163162_10966043	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300014157\|Ga0134078_10610874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	523	Open in IMG/M
3300014325\|Ga0163163_10173185	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2205	Open in IMG/M
3300014325\|Ga0163163_12938677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	532	Open in IMG/M
3300015201\|Ga0173478_10518040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	601	Open in IMG/M
3300015371\|Ga0132258_10206794	All Organisms → cellular organisms → Bacteria → Proteobacteria	4765	Open in IMG/M
3300015373\|Ga0132257_103005533	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300015374\|Ga0132255_102873660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	736	Open in IMG/M
3300016371\|Ga0182034_10648367	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	894	Open in IMG/M
3300016404\|Ga0182037_12062850	Not Available	512	Open in IMG/M
3300017655\|Ga0182739_1030366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2852	Open in IMG/M
3300018058\|Ga0187766_10595307	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300018429\|Ga0190272_12763711	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300018432\|Ga0190275_10810956	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300019361\|Ga0173482_10541872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	573	Open in IMG/M
3300023260\|Ga0247798_1056168	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	550	Open in IMG/M
3300023268\|Ga0247765_1050538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	861	Open in IMG/M
3300025580\|Ga0210138_1060297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	885	Open in IMG/M
3300025664\|Ga0208849_1086161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	888	Open in IMG/M
3300025903\|Ga0207680_10512673	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300025907\|Ga0207645_10084435	All Organisms → cellular organisms → Bacteria	2038	Open in IMG/M
3300025908\|Ga0207643_10289106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1018	Open in IMG/M
3300025914\|Ga0207671_11228272	Not Available	586	Open in IMG/M
3300025917\|Ga0207660_10393119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium	1116	Open in IMG/M
3300025919\|Ga0207657_11149054	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300025926\|Ga0207659_11816196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	518	Open in IMG/M
3300025928\|Ga0207700_10235701	All Organisms → cellular organisms → Bacteria	1558	Open in IMG/M
3300025930\|Ga0207701_11097197	Not Available	660	Open in IMG/M
3300025940\|Ga0207691_10778184	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300025942\|Ga0207689_10711207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	847	Open in IMG/M
3300025960\|Ga0207651_10160593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1761	Open in IMG/M
3300025961\|Ga0207712_11435487	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300026088\|Ga0207641_12416407	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300026116\|Ga0207674_11264801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	707	Open in IMG/M
3300027462\|Ga0210000_1041707	All Organisms → cellular organisms → Bacteria	729	Open in IMG/M
3300027573\|Ga0208454_1126543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	598	Open in IMG/M
3300027853\|Ga0209274_10407404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	702	Open in IMG/M
3300028379\|Ga0268266_11050450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300028380\|Ga0268265_10499534	Not Available	1146	Open in IMG/M
3300028380\|Ga0268265_10932324	Not Available	854	Open in IMG/M
3300028380\|Ga0268265_12510475	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300028786\|Ga0307517_10633285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	522	Open in IMG/M
3300028794\|Ga0307515_10383097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	1038	Open in IMG/M
3300031547\|Ga0310887_10281302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	940	Open in IMG/M
3300031708\|Ga0310686_116978903	Not Available	1041	Open in IMG/M
3300031820\|Ga0307473_11340579	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300031847\|Ga0310907_10121792	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1159	Open in IMG/M
3300031858\|Ga0310892_10288220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1030	Open in IMG/M
3300031908\|Ga0310900_10791743	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300031912\|Ga0306921_11638146	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300031954\|Ga0306926_12823661	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300032012\|Ga0310902_10866990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	619	Open in IMG/M
3300032013\|Ga0310906_10650376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	731	Open in IMG/M
3300032060\|Ga0318505_10180133	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300032094\|Ga0318540_10253015	Not Available	850	Open in IMG/M
3300032144\|Ga0315910_11224659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	586	Open in IMG/M
3300032157\|Ga0315912_11256378	Not Available	586	Open in IMG/M
3300032205\|Ga0307472_102519678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300032261\|Ga0306920_101973076	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300032782\|Ga0335082_10575850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	987	Open in IMG/M
3300032955\|Ga0335076_11171551	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M
3300033291\|Ga0307417_10348012	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	558	Open in IMG/M
3300033433\|Ga0326726_10732297	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	955	Open in IMG/M
3300034417\|Ga0364941_071884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	803	Open in IMG/M
3300034662\|Ga0314783_099283	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	619	Open in IMG/M
3300034678\|Ga0314803_122632	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	61.03%
Host-Associated	Host-Associated	38.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.21%
Plants	Host-Associated → Plants	38.97%
Aquatic	Environmental → Aquatic	8.82%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.12%
Rhizoplane	Host-Associated → Plants → Rhizoplane	16.91%
Sediment	Environmental → Aquatic → Sediment	5.15%
Roots	Host-Associated → Plants → Roots	2.94%
Marine	Environmental → Aquatic → Marine	2.21%
Freshwater	Environmental → Aquatic → Freshwater	1.47%
Peat	Environmental → Terrestrial → Peat	0.74%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.74%
Floodplain	Environmental → Terrestrial → Floodplain	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	12.50%
Loam	Environmental → Terrestrial → Soil → Loam	10.29%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.82%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.15%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.68%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.21%
Wetlands	Environmental → Aquatic → Marine → Wetlands	1.47%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.47%
Unclassified	Host-Associated → Plants → Roots → Unclassified	1.47%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.74%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.74%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.12%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.35%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.62%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.15%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.94%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.21%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	1.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.47%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.47%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	1.47%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.74%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.74%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	0.74%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.88%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	5.15%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.15%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.15%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.41%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.94%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.94%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.21%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.21%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.21%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.21%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.47%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.47%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.47%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.47%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.47%
Ectomycorrhiza	Host-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza	1.47%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.74%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.74%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	0.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Agricultural Soil	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.74%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.74%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.74%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.74%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001977	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5	Host-Associated	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004780	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare1Fresh	Environmental	Open in IMG/M
3300005183	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009095	Agricultural soil microbial communities from Utah to study Nitrogen management - Steer compost 2015	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011433	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT300_2	Environmental	Open in IMG/M
3300012129	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT530_2	Environmental	Open in IMG/M
3300012172	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT366_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012227	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT436_2	Environmental	Open in IMG/M
3300012228	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT700_2	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012511	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10	Environmental	Open in IMG/M
3300012512	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.old.270510	Host-Associated	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017655	Enriched backyard soil microbial communities from Emeryville, California, USA - eDNA 5th pass 30_C BE-Lig BY (version 2)	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300023260	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S197-509C-6	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300025580	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqC_D1 (SPAdes)	Environmental	Open in IMG/M
3300025664	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027462	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes)	Host-Associated	Open in IMG/M
3300027573	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028786	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM	Host-Associated	Open in IMG/M
3300028794	Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM	Host-Associated	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033291	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-10	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034678	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_04158662	2228664021	Soil	DPIHHAILRVSDIVAAVAAAKAAGAKVERDVMTAPIGGTPIKIAMLVDPDGNALELMELPKTLTHLPH
JGI24746J21847_10014423	3300001977	Corn, Switchgrass And Miscanthus Rhizosphere	VAAAKAAGAKVDRDVATVTIGGASIKIAMLVDPQGNALEIMELPKALTHLPH*
Ga0062590_1021687541	3300004157	Soil	AAKAAGAKVERDVMTAPIGGTPIKIAMLIDPDGNALELMELPTTLTHLPH*
Ga0062378_102217582	3300004780	Wetland Sediment	HAIFQVLDVAATVSAVKAAGGTVRGDVVSAPIGNITVKIATAIDPDGNVLELMELPKGVNHLPHP*
Ga0068993_101094203	3300005183	Natural And Restored Wetlands	DVGATVAAAKAAGATMKGDVASVPIGGMPVKIATLVDPDGNVLELMELPKGVDHLPHP*
Ga0065715_102033981	3300005293	Miscanthus Rhizosphere	VAAAKAAGATVDRDVATVSIGGAPIKIAMLVDPQGNALEIMELPKSLTHLPH*
Ga0070676_100418654	3300005328	Miscanthus Rhizosphere	MNWLDIAATVAAAKAAGAKVDRNVVTVSIGGAPIQIAMLVDPQGNALEIMELPKAFTHRPH*
Ga0070677_105997881	3300005333	Miscanthus Rhizosphere	AGAKVERDVMTAPIGGTPIKIAMLVDPDGNALELMELPKTLTHLPH*
Ga0070689_1014467171	3300005340	Switchgrass Rhizosphere	VSDIAATVAAAKAAGAKVNREVSTVTIGGAPIKIAMLVDPQGNALEIMELPKTLTHLPH*
Ga0070669_1006168323	3300005353	Switchgrass Rhizosphere	ASVAAAKAAGAKVDRDVASVPIGGTPIKIAMLTDPDGNALGLMELPPTLTHLPH*
Ga0070671_1017082532	3300005355	Switchgrass Rhizosphere	VAAAKAAGAKVDRDVASVPIGGTPIKIAMLTDPDGNALELMELPTNLTHLPH*
Ga0070667_1002686441	3300005367	Switchgrass Rhizosphere	ILRVSDIKASVAAAKAAGAKVDRDVASVPIGGTPIKIAMLTDPDGNALELMELPTNLTHLPH*
Ga0070667_1004094461	3300005367	Switchgrass Rhizosphere	VATVAAAKAAGATVKTDVASVPIGNIMVKLATLTDPDGNVLELMELPKGADTLRHP*
Ga0070713_1006691031	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	AGATVDRNVSTVSIGGAPIKIAMLVDPQGNALEIMELPKTLTHLPH*
Ga0070713_1020429671	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	EPGSAPDSMPHAIFHVSDMNATLAAAKAGGATMKGEVASVSIGGMPLKVAMLVDPDGNVLEIMELPKGVSHLKHP*
Ga0070694_1006707911	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	DIAATVAAAKGAGAKVQAEVATVQIGGAPIKIATVVDPDGNVLELMELPKGTDHLPHP*
Ga0070678_1005082242	3300005456	Miscanthus Rhizosphere	ANDPMHHAIFRVSDIAATVAAAKAAGAKVDRDVSTVSIGGTPIKIAMIVDPQGNALEIMELPKTLTHLPH*
Ga0070679_1017394411	3300005530	Corn Rhizosphere	TATNDPMPHAVFHVSDMNATLAAAKAGGATMKGDVASVSIGGMSLKVAMVVDPDGNVLELMELPKGVSHLKHP*
Ga0070684_1003344223	3300005535	Corn Rhizosphere	RDPTATNDPMPHAVFHVSDMNATLAAAKAGGATMKGDVASVSIGGMSLKVAMVVDPDGNVLELMELPKGVSHLKHP*
Ga0070731_109764591	3300005538	Surface Soil	VSDLGATVAAAKAAGATMKTDVASVKIGSMPVKVAMLVDPDGNVLEVMELPKDVDHLRHP
Ga0070672_1007976431	3300005543	Miscanthus Rhizosphere	VAAAKAAGAKVNREVSTVTIGGAPIKIAMLVDPQGNALEIMELPKTLTHLPH*
Ga0070695_1010030851	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	AGATVDRDVMTAPIGGSPIKIAMLVDPDGNALELMELPKTLTHLPH*
Ga0070704_1015787812	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VSDIAATVAAAKAAGAKVDRDVATVSIGGAPIKIAMLVDPQGNALEIMELPKALTHLPH*
Ga0070761_105477593	3300005591	Soil	DIGASVAAAKAAGATMKREVASVPIGGMPVKVATLVDPDGNVLELMELPKGVGHLRHP*
Ga0068866_109951181	3300005718	Miscanthus Rhizosphere	VSAAKAAGATMRGEVATAPIGGIQVKIATLVDPDGNVLELMELPKGHDHLPHP*
Ga0066903_1015042102	3300005764	Tropical Forest Soil	RTSVAAARAAGAKVERDVMTASIGGAPIEIAMLVDPDGNALELMELPATLTHLPH*
Ga0066903_1084715252	3300005764	Tropical Forest Soil	DIVATVAAAKAAGATVDRDVSTVSIGGAPIKIAMLVDPQGNALEIMELPKTLTHLPH*
Ga0068870_110808272	3300005840	Miscanthus Rhizosphere	AAKDPIHHAILRVSDIVASVAAAKVAGATVERDVMTAPIGGTPIKIAMLVDPDGNALELMELPKTLTHLPH*
Ga0068858_1001486061	3300005842	Switchgrass Rhizosphere	KAAGAKVDRNVVTVSIGGAPIQIAMLVDPQGNALEIMELRKAFTHRPH*
Ga0068862_1016598911	3300005844	Switchgrass Rhizosphere	RASVAAAKAAGAKVDRDVMTAPIGGTPIKIAMLTDPDGNALELMELPTTLTHLPH*
Ga0068862_1020856812	3300005844	Switchgrass Rhizosphere	AATVAAAKAAGAKVDRDVSTVSIGGSPIKIAMLVDPQGNALEIMELPKTLTHLPH*
Ga0075427_100639691	3300006194	Populus Rhizosphere	SDIAATVAAAKAAGAKVDRDVATVSIGGAPIKIAMLVDPQGNALEIMELPKTLTHLPH*
Ga0075431_1004804741	3300006847	Populus Rhizosphere	AILRVSDIRASVAAAKAAGAKVERDVMTAPIGGTPIKIAMLVDPDGNALELMELPPTLTHLPH*
Ga0075420_1009524072	3300006853	Populus Rhizosphere	IRASVAAAKAAGAKVERDVMTVPIGGTPIKIAMLVDPDGNALELMELPATLTHLPH*
Ga0068865_1002632492	3300006881	Miscanthus Rhizosphere	MNWLDIAATVAAAKAAGAKVDRNVVTVSIGGAPIQIAMLVDPQGNALEIMELRKAFTHRPH*
Ga0079215_102234431	3300006894	Agricultural Soil	VSDIAATIAAAKAAGATINGEVATVPIGGMPVKIAMLVDPDGNVLELMELPKGATKLPHP
Ga0079219_110333332	3300006954	Agricultural Soil	KKAGATMKGDVASASIGGMPVKIATMVDPDGNVLEVMELAKGADKLPHP*
Ga0079218_122742802	3300007004	Agricultural Soil	AADGQMAHAIFQVSDVAGTVAAAKGAGASVRGEIASVPIGNIQVKIATVVDPDGNVLELMELPKGVDHLPHP*
Ga0105106_106008822	3300009078	Freshwater Sediment	AAAKAAGATMDGDVVTVPIGGAPIKIAMLVDPDGNALELMELPKGVDHLPH*
Ga0079224_1006754682	3300009095	Agricultural Soil	SDLAASVEAAKAAGATMDRDVATVAIGGTPIKIAFLVDPDGNSIELMELPANLKALPH*
Ga0105247_101939371	3300009101	Switchgrass Rhizosphere	IAATVAAAKAAGATVDRDVATVSIGGAPIKIAMLVDPQGNALEIMELPKALTHLPH*
Ga0105241_106985722	3300009174	Corn Rhizosphere	SATLAAAKAAGATVKGNVASVSIGTTAVKVTTLVDPDGNVLELMELPKGVDHLRHP*
Ga0105242_122070361	3300009176	Miscanthus Rhizosphere	VAAAKAAGATVDRDVATVSIGGAPIKIAMLVDPQGNALELMELPK
Ga0105237_100845292	3300009545	Corn Rhizosphere	MNATLAAAKAGGATMKGDVASVSIGGMSLKVAMVVDPDGNVLELMELPKGVSHLKHP*
Ga0105249_121473131	3300009553	Switchgrass Rhizosphere	AIFRVSDIAATVAAAKAAGAKVNREVSTVTIGGAPIKIAMLVDPQGNALEIMELPKTLTHLPH*
Ga0126384_114176512	3300010046	Tropical Forest Soil	AILRVSDIVATVAAAKAAGATVDRDVSTVSIGGAPIKIAMLVDPQGNALEIMELPKTLTHLPH*
Ga0126382_123425221	3300010047	Tropical Forest Soil	AGATMKGNVASAKIGNMSVKVAQLVDPEGNVLELMELPKGANHLQHL*
Ga0126376_114395452	3300010359	Tropical Forest Soil	ILRVSDIVATVAAAKAAGATVDRDVSTVTIGGAPIKIAMLVDPQGNALEIMELPKTLTHLPH*
Ga0105239_101555101	3300010375	Corn Rhizosphere	IFHVSDINATVAAAKAAGAKMKGEVASVPIGGTPIKIAQMTDPDGNALEIMELPKGTDHLPHP*
Ga0126381_1000334876	3300010376	Tropical Forest Soil	DMGATVGAAKAAGATMKGDVASVSIGDTPVKVATLVDPDGNVLELMELPKDVSHLPHP*
Ga0126383_128583752	3300010398	Tropical Forest Soil	FHVSDINATVAAAKAAGATMKGEVATVKIGGAPIKIAEMTDPDGNVLEAMELPQGPDHLPH*
Ga0134127_108291822	3300010399	Terrestrial Soil	TAAKAAGAKMQGEVATAPIGGIQVKIGTIVDPDGNVLELMELPKGHDHLPHP*
Ga0134122_107562483	3300010400	Terrestrial Soil	KAAGATVERDVMTAPIGGTPIKIAMLIDPDGNALELMELPTTLTHLPH*
Ga0134122_110557983	3300010400	Terrestrial Soil	DPMAHAIFRVSDVAATVAAAKSAGATMKGEVASIQIGKMPVKIAQMVDPDGNTLEIMELPKGLDHLKHP*
Ga0134121_118228812	3300010401	Terrestrial Soil	PEFLLARREPGAANDSIPHAIFHVSDISATIAAAKSAGATMKGEIVSITIGKMPVKVAQLVDPDGNALELMELPKGADHIQHP*
Ga0137443_10637131	3300011433	Soil	VAAAKAAGASMQGDVVTVPIGGMPVKIATLVDPQGNVLELMELPKGATHLPHP*
Ga0137345_10431652	3300012129	Soil	MAHAIFHVSDIAATVAAAKAAGASMEGDVVTVPIGGAPIKIATVVDPQGNVLELMELPKGLDHLPHP*
Ga0137320_11363731	3300012172	Soil	KDPMHHAIFKVSDIAATVAAAKAAGATLEGDVVTVPIGGAPIKIAMLVDPDGNALEIMELPKGVDHLPH*
Ga0150985_1022793031	3300012212	Avena Fatua Rhizosphere	TVAAAKAAGARVDRDVSTASIGGKPIKIAMLVDPQGNALEIMELPAELTHLPH*
Ga0137449_11436181	3300012227	Soil	HAIFRVSDIAATVAAAKAAGATMEGEVVTVPIGGTPIKIGMLVDPDGNALEIMELPKGVSHLPH*
Ga0137459_10646772	3300012228	Soil	VSAAKAAGAKMEGEVVTVPIGGMPVKIATMTDPDGNVLELMELAKGATHLPHP*
Ga0137435_10798521	3300012232	Soil	KVSDIAATVAAAKAAGATLEGDVVTVPIGGAPIKIAMLVDPDGNALELMELPKGVDHLPH
Ga0157332_10784672	3300012511	Soil	DSMHHAIFRVSDIVATVAAAKAAGATVDRDVATVSIGGAPIKIAMLVDPQGNALEIMELPKSLTHLPH*
Ga0157327_10090501	3300012512	Arabidopsis Rhizosphere	AATVAAAKAAGGTVDRDVSTVTIGGAPIKIAMLVDPQGNALEIMELPKALTHLPH*
Ga0157299_100613312	3300012899	Soil	AAAKAAGASVRGEIGSAPIGNIQVKIATVVDPDGNVLELMELPKGVDHLPHP*
Ga0157283_101145232	3300012907	Soil	VAAAKAAGAKVDRDVATVSIGGAPIKIAMLVDPQGNALEIMELPKALTHLPH*
Ga0137410_109963571	3300012944	Vadose Zone Soil	AAAKKAGATMKGDVASVQIGKMSVKVAQLVDPDGNVLELMELPKGADHLQHP*
Ga0126375_102227663	3300012948	Tropical Forest Soil	VSDIAATVAAAKAAGATVDRDVSTVSIGGAPIKIAMLVDPQGNALEIMELPKGLTHLPH*
Ga0164307_114445381	3300012987	Soil	LTRSEPGTAADTMAHAIFHVSDMNATLATAKTAGATMKGNVASVKIGSMSVKVAQLVDPDGNVLELMELPKGADTLRHP*
Ga0157371_109901611	3300013102	Corn Rhizosphere	KAAGAKVDRDVATVTIGGAPIKIAMLVDPQGNALEIMELPKALTHLPH*
Ga0163162_109660431	3300013306	Switchgrass Rhizosphere	AAKAAGAKVDRNVVTVSIGGAPIQIAMLVDPQGNALEIMELRKAFTHRPH*
Ga0134078_106108742	3300014157	Grasslands Soil	AAGATMKGDVASATIGGMPVKIATMVDPDGNVLEIMELAKGANKLPHP*
Ga0163163_101731853	3300014325	Switchgrass Rhizosphere	ATVAAAKAAGAKVDRDVSTVSIGGSPIKIAMLVDPQGNALEIMELPKALTHLPH*
Ga0163163_129386771	3300014325	Switchgrass Rhizosphere	ATVAAAKAAGARVDRDVTTVSIGGAPIKIAMVVDPQGNALEIMELPKELTHLPH*
Ga0173478_105180403	3300015201	Soil	ASVAAAKAAGAKVERDVMTAPIGGTPIKIAMLIDPDGNALELMELPTTLTHLQH*
Ga0132258_102067941	3300015371	Arabidopsis Rhizosphere	IFRVPDVAATVAAAKAAGAKISRDVSTVTIGGSPIKIATLVDPQGNALEIMELPKALTHLPH*
Ga0132257_1030055331	3300015373	Arabidopsis Rhizosphere	AGAKVERDVMTVPIGGAPIKIAMLVDPDGNALELMELPATLTHLPH*
Ga0132255_1028736602	3300015374	Arabidopsis Rhizosphere	MHHAIFRISDIAATVAAAKPRCRDVATVSIGGAPIKIAMLVDPQGNALEIMELPKALTHLPN*
Ga0182034_106483672	3300016371	Soil	AAAKAAGATVDRDVSTVTIGGAPIKIAMLVDPQGNALEIMELPKTLTHLPH
Ga0182037_120628501	3300016404	Soil	RREPGAANDQIPHAIFHVSDIGAIVAAAKAAGATVKGDVASVPIGGIPIKLVTLVDPDGNVLEVMELPKGLDHLKHP
Ga0182739_10303664	3300017655	Soil	AATVAAAKAAGAKMEGDVATVPIGGTPIKIAMLVDPDGNALEIMELPKDLTHLPH
Ga0187766_105953072	3300018058	Tropical Peatland	AANDPMHHAILRVSDIVATVAAAKAAGATVDRDVSTVSIGGAPIKIAMLVDPQGNALEIMELPKTLTHLPH
Ga0190272_127637112	3300018429	Soil	VAAAKAAGATVKGDVVSVPIGNIMVKIATLVDPDGNVLELMELPKGIDHLPHP
Ga0190275_108109561	3300018432	Soil	HAIFHVSDIAATVAAAKAAGASMEGEVVSVPIGGMPVKIANLVDPDGNVLELMELPKGVDHLPHP
Ga0173482_105418721	3300019361	Soil	ATVAAAKAAGASVRGEIGSAPIGNIQVKIATVVDPDGNVLELMELPKGVDHLPHP
Ga0247798_10561681	3300023260	Soil	RASVAAAKAAGAKVERDVVTVPIGGTPIKIAMLVDPDGNALELMELPPTLTHLPH
Ga0247765_10505381	3300023268	Plant Litter	AIFHVSDVDATIAAAKGAGATMKGNVASIKIGSMPVKVAQLTDPEGNVLELMELPKGASHIQHP
Ga0210138_10602972	3300025580	Natural And Restored Wetlands	DVGATVAAAKAAGATMKGDVASVPIGGMPVKIATLVDPDGNVLELMELPKGVDHLPHP
Ga0208849_10861612	3300025664	Arctic Peat Soil	VAAAKAAGATIKTDVASVTIGAMKLKIATLADPDGNVLELMQLPKGANHIQHP
Ga0207680_105126731	3300025903	Switchgrass Rhizosphere	RVSDIAATVAAAKAAGAKVDRDVSTVSIGGSPIKIAMLVDPQGNALEIMELPKALTHLPH
Ga0207645_100844352	3300025907	Miscanthus Rhizosphere	MNWLDIAATVAAAKAAGAKVDRNVVTVSIGGAPIQIAMLVDPQGNALEIMELRKAFTHRP
Ga0207643_102891061	3300025908	Miscanthus Rhizosphere	MNWLDIAATVAAAKAAGAKVDRDVATVSIGGAPIKIAMLVDPQGNALEIMELPKTLTHLP
Ga0207671_112282721	3300025914	Corn Rhizosphere	DMNATLAAAKAGGATMKGDVASVSIGGMSLKVAMVVDPDGNVLELMELPKGVSHLKHP
Ga0207660_103931191	3300025917	Corn Rhizosphere	SDPIPHAVLHVSDMGATLAAAKAAGATMKGEVASVSIGSTPVKVATLVDPDGNVLELMELPKGVGHLRHP
Ga0207657_111490541	3300025919	Corn Rhizosphere	AKAAGAKVDRDVATVSIGGAPIKIAMLVDPQGNALEIMELPKALTHLPH
Ga0207659_118161962	3300025926	Miscanthus Rhizosphere	EATAASDPIHHAILRVSDIRASVAAAKAAGAKVERDVMTAPIGGASIKIAMLIDPDGNALELMELPTTLTHLPH
Ga0207700_102357013	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	AAPDSMPHAIFHVSDMNATLAAAKAGGATMKGEVASVTIGGMPLKVAMLVDPDGNVLEVMELPKGVSHLRHP
Ga0207701_110971971	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	DSMHHAIFRVSDIVATVAAAKAAGATVDRDVATVSIGGAPIKIAMLVDPQGNALEIMELPKSLTHLPH
Ga0207691_107781841	3300025940	Miscanthus Rhizosphere	LRVSDITASVAAAKAAGAKVERDVMTVPIGGAPIKIAMLVDPDGNALELMELPATLTHLP
Ga0207689_107112071	3300025942	Miscanthus Rhizosphere	AKSAGAKMKGEVASLKIGKMPVKIAQLTDPDGNVLELMELPKDADHIQHP
Ga0207651_101605931	3300025960	Switchgrass Rhizosphere	AAAKAAGAKVDRDVASVPIGGTPIKIAMLTDPDGNALELMELPTNLTHLPH
Ga0207712_114354871	3300025961	Switchgrass Rhizosphere	KAAGASVRGEIGSAPIGNIQVKIATVVDPDGNVLELMELPKGVDHLPHP
Ga0207641_124164072	3300026088	Switchgrass Rhizosphere	LDATVAAARKAGGTLKGDVAAVKIGNMSLRLAMVIDPDGNVLELMELPKGADHLQHL
Ga0207674_112648013	3300026116	Corn Rhizosphere	LAAAKTAGATMKGNVASVKIGTMAVKVAQLVDPEGNVLELMELPKGADTLRHP
Ga0210000_10417071	3300027462	Arabidopsis Thaliana Rhizosphere	DIAATVAAAKAAGAKVDRDVATVTIGGAPIKIAMLVDPQGNALEIMELPKALTHLPH
Ga0208454_11265432	3300027573	Soil	IFRVTDIAASVAAAKAAGAKVATDTVEVPIGGVPVKVAMLNDPDGNVIELMELPKELAALKHP
Ga0209274_104074041	3300027853	Soil	PIMHAVFRVSDIAAAVLAAKTAGATIKSDVASITIGGMSLKSATLVDPDGNVLEIMELPKGVTHLRHP
Ga0268266_110504501	3300028379	Switchgrass Rhizosphere	NDHAIFRVSDIAATVAAAKAAGAKVDRDVATVSIGGAPIKIAMLVDPQGNALEIMELPKGLTHLPH
Ga0268265_104995341	3300028380	Switchgrass Rhizosphere	FRVSDIAATVAAAKAAGAKVDRDVSTVSIGGSPIKIAMLVDPQGNALEIMELPKTLTHLP
Ga0268265_109323244	3300028380	Switchgrass Rhizosphere	VAAAKAAGATVERDVMTAPIGGTPIKIAMLVDPDGNALELMELPTTLTHLPH
Ga0268265_125104751	3300028380	Switchgrass Rhizosphere	AGAATDSMPHAIFHVADLGATVAAAKGAGATMKGEVASVQIGKMAVKIAQLVDPDGNVLELMELPKGTDHIQHP
Ga0307517_106332851	3300028786	Ectomycorrhiza	GAATDSMAHAIFHVSDVEAAIAAAKSAGATMKGNVASVKIGSMPVKVAQLTDPDGNALELMELPKGANHLQHP
Ga0307515_103830971	3300028794	Ectomycorrhiza	GATVTAAKSAGATMKGDVASVQIGSMSVKVAQLVDPDGNVLELMELPKGADHLRHP
Ga0310887_102813021	3300031547	Soil	ILRVSDIRASVAAAKAAGATVERDVMTAPIGGTPIKIAMLVDPDGNALELMELPPTLTHLPH
Ga0310686_1169789032	3300031708	Soil	AKAAGATTKSDVASVSIGGMSLKSATLVDPYGNVVELMELPKGVGHLKHP
Ga0307473_113405792	3300031820	Hardwood Forest Soil	MHHAILRVSDIVATVAAAKAAGATVDRDVSTVSIGGAPIKIAMLVDPQGNALEIMELPKTLTHLPH
Ga0310907_101217922	3300031847	Soil	VAAAKAAGATVERDVMTAPIGGTPIKIAMLVDPDGNALELMELPPTLTHLPH
Ga0310892_102882202	3300031858	Soil	IKASVAAAKTAGATVDRDVASVPIGGTPIKIAMLTDPDGNALELMELPPTLTHLPH
Ga0310900_107917431	3300031908	Soil	AAGAKVDRDVATVPIGGAPIKIAMLVDPQGNALEIMELPKGLMHLPH
Ga0306921_116381462	3300031912	Soil	VAAAKAAGATVERDIATVSIGGAPIKIAMLVDPQGNALEIMELPKTLTHLPH
Ga0306926_128236611	3300031954	Soil	LLQSREPGAANDPIPHAVFHVSDMGATIAAAKAAGATMKGDVASVSIGATPVKVATLVDPDGNVLELMELPKGVDHLQHP
Ga0310902_108669902	3300032012	Soil	AATVAAAKAAGAKVDRDVATVKIGGAPIKIAMLVDPQGNALEIMELPKTLTHLPH
Ga0310906_106503762	3300032013	Soil	CERPNDHAIFRVSDIAATVAAAKAAGAKVDRDVATVSIGGAPIKIAMLVDPQGNALEIMELPKGLTHLPH
Ga0318505_101801333	3300032060	Soil	IPHAIFHVSDIGAIVAAAKAAGATVKGDVASVPIGGIPIKLVTLVDPDGNVLEVMELPKGLDHLKHP
Ga0318540_102530152	3300032094	Soil	DIGAIVAAAKAAGATVKGDVASVPIGGIPIKLVTLVDPDGNVLEVMELPKGLDHLKHP
Ga0315910_112246591	3300032144	Soil	KAAGATVERDVMTAPIGGTPIKIAMLIDPDGNALELMELPTTLTHLPH
Ga0315912_112563782	3300032157	Soil	TVAAAKAAGAKVDRDVATVSIGGSPIKIAMLVDPQGNALEIMELPKALKQLPH
Ga0307472_1025196782	3300032205	Hardwood Forest Soil	AAKAAGATVDRDVSTVSIGGAPIKIAMLVDPQGNALEIMELPKTLTHLPH
Ga0306920_1019730761	3300032261	Soil	AKAAGATVDRDVSTVSIGGAPIKIAMLVDPQGNALEIMELPKTLTHLPH
Ga0335082_105758502	3300032782	Soil	VAAAKAAGATIKSNVASIAIGGMPVKIATLTDPDGNVLELMELPKGVTHLRHP
Ga0335076_111715512	3300032955	Soil	SDINATVAAAKAAGATMKGEVASVSIGGTPIKIATMTDPDGNVLEVMELPKGTDHLPH
Ga0307417_103480121	3300033291	Salt Marsh	PEFLVALRESGIGKDSMAHAIFRVSDLAATVATAKAAGATMDGDIATVPIGGMPVKIASMMDPQGNALEIMELPAGAEHLPHP
Ga0326726_107322971	3300033433	Peat Soil	DVGATVAAAKAAGATMKGDVASVPIGGMPVKIATMVDPDGNVIEIMELPKGVDHLQHP
Ga0364941_071884_2_142	3300034417	Sediment	AGATVERDVMTAPIGGTPIKIAMLVDPDGNALELMELPTTLTHLPH
Ga0314783_099283_388_591	3300034662	Soil	MAHAIFRVSDLAATLTAAKAAGAKMQGEVATAPIGGIQVKIGTIVDPDGNVLELMELPKGHDHLPHP
Ga0314803_122632_312_470	3300034678	Soil	VATAKAAGAKVDRDVATVSIGGAPIKIAMLVDPQGNALEIMELPKTLTHLPH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057501

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences