Metagenome / Metatranscriptome Family F057518

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057518
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	62 residues
Representative Sequence	VSENFGTIVVCDFEYEVEPGDLPNVLCMVAHVLDENLQHVRTIRLWRGEFDPTPPFDIG
Number of Associated Samples	94
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	68.38 %
% of genes near scaffold ends (potentially truncated)	94.85 %
% of genes from short scaffolds (< 2000 bps)	94.12 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.72

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.529 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (29.412 % of family members)
Environment Ontology (ENVO)	Unclassified (50.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.353 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 33.33% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.72
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.72
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.55.3.5: Ribonuclease H-like	d2qxfa_	2qxf	0.67
c.55.3.5: Ribonuclease H-like	d3mxma_	3mxm	0.67
c.55.3.5: Ribonuclease H-like	d1j54a_	1j54	0.66
c.55.3.5: Ribonuclease H-like	d1w0ha_	1w0h	0.66
c.55.3.0: Ribonuclease H-like	d2p51a_	2p51	0.65

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF11994	DUF3489	1.47
PF13683	rve_3	1.47
PF12307	DUF3631	0.74
PF12375	DUF3653	0.74
PF12728	HTH_17	0.74
PF00589	Phage_integrase	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.53 %
Unclassified	root	N/A	1.47 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.53 %
Unclassified	root	N/A	1.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.53 %
Unclassified	root	N/A	1.47 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	95.59 %
Unclassified	root	N/A	1.47 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	95.59 %
Unclassified	root	N/A	1.47 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	95.59 %
Unclassified	root	N/A	1.47 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	92.65 %
Unclassified	root	N/A	1.47 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	92.65 %
Unclassified	root	N/A	1.47 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.74 %

Name	Rank	Taxonomy	Distribution
Bradyrhizobium lablabi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	1.47 %
Unclassified	root	N/A	1.47 %
Rhodoplanes elegans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes elegans	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_104094557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	514	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1038826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	865	Open in IMG/M
3300000793\|AF_2010_repII_A001DRAFT_10035073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1165	Open in IMG/M
3300000955\|JGI1027J12803_100253102	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	710	Open in IMG/M
3300000955\|JGI1027J12803_101612646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2042	Open in IMG/M
3300000955\|JGI1027J12803_101835505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	541	Open in IMG/M
3300000955\|JGI1027J12803_108592791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1349	Open in IMG/M
3300000956\|JGI10216J12902_110285579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1493	Open in IMG/M
3300002239\|JGI24034J26672_10053056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	700	Open in IMG/M
3300004091\|Ga0062387_100172097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1274	Open in IMG/M
3300004633\|Ga0066395_10385492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	786	Open in IMG/M
3300005332\|Ga0066388_100498071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1855	Open in IMG/M
3300005332\|Ga0066388_103009817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	861	Open in IMG/M
3300005332\|Ga0066388_105612483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	635	Open in IMG/M
3300005457\|Ga0070662_101405111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	601	Open in IMG/M
3300005536\|Ga0070697_100328116	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1319	Open in IMG/M
3300005543\|Ga0070672_102171447	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	500	Open in IMG/M
3300005610\|Ga0070763_10653209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	613	Open in IMG/M
3300005764\|Ga0066903_105366063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	677	Open in IMG/M
3300006052\|Ga0075029_101192483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	531	Open in IMG/M
3300006052\|Ga0075029_101356898	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300006176\|Ga0070765_101820005	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300006844\|Ga0075428_101542288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	695	Open in IMG/M
3300006904\|Ga0075424_101835868	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300009090\|Ga0099827_10448574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1106	Open in IMG/M
3300009524\|Ga0116225_1262988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	773	Open in IMG/M
3300009672\|Ga0116215_1267750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	746	Open in IMG/M
3300010048\|Ga0126373_12361770	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	592	Open in IMG/M
3300010049\|Ga0123356_10614207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1252	Open in IMG/M
3300010366\|Ga0126379_10590883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1195	Open in IMG/M
3300010376\|Ga0126381_100553157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1631	Open in IMG/M
3300010376\|Ga0126381_102523857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	736	Open in IMG/M
3300010376\|Ga0126381_102888264	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	684	Open in IMG/M
3300010376\|Ga0126381_105002383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	508	Open in IMG/M
3300010398\|Ga0126383_13405025	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	519	Open in IMG/M
3300010401\|Ga0134121_11048713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	804	Open in IMG/M
3300011271\|Ga0137393_11056972	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	690	Open in IMG/M
3300012211\|Ga0137377_11185984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	693	Open in IMG/M
3300012362\|Ga0137361_10973840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	767	Open in IMG/M
3300012582\|Ga0137358_11092066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	509	Open in IMG/M
3300012923\|Ga0137359_10716054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	871	Open in IMG/M
3300012924\|Ga0137413_11208976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	603	Open in IMG/M
3300012961\|Ga0164302_10630947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	782	Open in IMG/M
3300012987\|Ga0164307_11040401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	669	Open in IMG/M
3300012989\|Ga0164305_10779583	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	791	Open in IMG/M
3300014325\|Ga0163163_11264244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	800	Open in IMG/M
3300014969\|Ga0157376_11662667	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	673	Open in IMG/M
3300014969\|Ga0157376_11680212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	670	Open in IMG/M
3300015372\|Ga0132256_102213093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	654	Open in IMG/M
3300015374\|Ga0132255_105713311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	526	Open in IMG/M
3300016270\|Ga0182036_10686722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	827	Open in IMG/M
3300016294\|Ga0182041_11295433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	667	Open in IMG/M
3300016319\|Ga0182033_11366687	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	637	Open in IMG/M
3300016319\|Ga0182033_11735685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	566	Open in IMG/M
3300016319\|Ga0182033_12010336	Not Available	526	Open in IMG/M
3300016341\|Ga0182035_10107092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2062	Open in IMG/M
3300016341\|Ga0182035_11399492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	628	Open in IMG/M
3300016341\|Ga0182035_11971811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	530	Open in IMG/M
3300016357\|Ga0182032_10329819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1215	Open in IMG/M
3300016357\|Ga0182032_10497652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1002	Open in IMG/M
3300016357\|Ga0182032_11069915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	691	Open in IMG/M
3300016357\|Ga0182032_11295764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	629	Open in IMG/M
3300016371\|Ga0182034_11314726	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	631	Open in IMG/M
3300016387\|Ga0182040_10061396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2393	Open in IMG/M
3300016387\|Ga0182040_10686532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	836	Open in IMG/M
3300016387\|Ga0182040_11048036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	681	Open in IMG/M
3300016387\|Ga0182040_11356910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	601	Open in IMG/M
3300016387\|Ga0182040_11484608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	575	Open in IMG/M
3300016422\|Ga0182039_10652606	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	924	Open in IMG/M
3300016422\|Ga0182039_11206974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	683	Open in IMG/M
3300016422\|Ga0182039_11973968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	536	Open in IMG/M
3300016422\|Ga0182039_12070346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	524	Open in IMG/M
3300016445\|Ga0182038_11548749	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	596	Open in IMG/M
3300018476\|Ga0190274_12521370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium lablabi	611	Open in IMG/M
3300018476\|Ga0190274_13018489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	565	Open in IMG/M
3300020583\|Ga0210401_11267779	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	595	Open in IMG/M
3300021079\|Ga0194055_10339252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	540	Open in IMG/M
3300021474\|Ga0210390_10745650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	814	Open in IMG/M
3300021560\|Ga0126371_12396922	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	638	Open in IMG/M
3300025933\|Ga0207706_11525760	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	544	Open in IMG/M
3300026067\|Ga0207678_11155155	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	686	Open in IMG/M
3300026304\|Ga0209240_1011835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3315	Open in IMG/M
3300027812\|Ga0209656_10510938	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	524	Open in IMG/M
3300027874\|Ga0209465_10324662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	771	Open in IMG/M
3300027903\|Ga0209488_10762241	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	689	Open in IMG/M
3300027903\|Ga0209488_10764948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	687	Open in IMG/M
3300028784\|Ga0307282_10605949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	531	Open in IMG/M
3300028819\|Ga0307296_10748198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	533	Open in IMG/M
3300031058\|Ga0308189_10507373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	520	Open in IMG/M
3300031543\|Ga0318516_10234212	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1062	Open in IMG/M
3300031682\|Ga0318560_10613076	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	589	Open in IMG/M
3300031708\|Ga0310686_114690334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1100	Open in IMG/M
3300031724\|Ga0318500_10305791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	779	Open in IMG/M
3300031744\|Ga0306918_10041299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3002	Open in IMG/M
3300031744\|Ga0306918_10626789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	843	Open in IMG/M
3300031744\|Ga0306918_11478097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	520	Open in IMG/M
3300031747\|Ga0318502_10932425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	528	Open in IMG/M
3300031764\|Ga0318535_10190280	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	918	Open in IMG/M
3300031765\|Ga0318554_10669008	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	583	Open in IMG/M
3300031768\|Ga0318509_10040435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2332	Open in IMG/M
3300031821\|Ga0318567_10079058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1750	Open in IMG/M
3300031845\|Ga0318511_10277285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	755	Open in IMG/M
3300031846\|Ga0318512_10369370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	719	Open in IMG/M
3300031879\|Ga0306919_10587085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	859	Open in IMG/M
3300031879\|Ga0306919_11386881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	531	Open in IMG/M
3300031890\|Ga0306925_10556905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1215	Open in IMG/M
3300031890\|Ga0306925_11967382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	553	Open in IMG/M
3300031897\|Ga0318520_10803336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	590	Open in IMG/M
3300031910\|Ga0306923_10444628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1471	Open in IMG/M
3300031910\|Ga0306923_11408118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	734	Open in IMG/M
3300031912\|Ga0306921_10173607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes elegans	2525	Open in IMG/M
3300031912\|Ga0306921_10460702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1481	Open in IMG/M
3300031912\|Ga0306921_10667224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1197	Open in IMG/M
3300031941\|Ga0310912_10413676	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1050	Open in IMG/M
3300031941\|Ga0310912_10610535	Not Available	848	Open in IMG/M
3300031941\|Ga0310912_10882637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	689	Open in IMG/M
3300031942\|Ga0310916_11437027	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	564	Open in IMG/M
3300031942\|Ga0310916_11684671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	513	Open in IMG/M
3300031942\|Ga0310916_11743205	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	503	Open in IMG/M
3300031945\|Ga0310913_10311945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1110	Open in IMG/M
3300031946\|Ga0310910_10341167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1183	Open in IMG/M
3300031946\|Ga0310910_11392943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	540	Open in IMG/M
3300031947\|Ga0310909_10727265	All Organisms → cellular organisms → Bacteria	823	Open in IMG/M
3300031954\|Ga0306926_12279754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	600	Open in IMG/M
3300032025\|Ga0318507_10296571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	703	Open in IMG/M
3300032035\|Ga0310911_10373915	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	824	Open in IMG/M
3300032042\|Ga0318545_10241422	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	648	Open in IMG/M
3300032042\|Ga0318545_10256242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	628	Open in IMG/M
3300032043\|Ga0318556_10304307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	833	Open in IMG/M
3300032059\|Ga0318533_10059921	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2555	Open in IMG/M
3300032059\|Ga0318533_10867325	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	662	Open in IMG/M
3300032076\|Ga0306924_11699333	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	662	Open in IMG/M
3300032076\|Ga0306924_12463473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	523	Open in IMG/M
3300032118\|Ga0315277_10722497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	954	Open in IMG/M
3300032261\|Ga0306920_100632613	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1582	Open in IMG/M
3300032261\|Ga0306920_101852526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	850	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.44%
Host-Associated	Host-Associated	9.56%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.03%
Plants	Host-Associated → Plants	8.82%
Aquatic	Environmental → Aquatic	4.41%
Arthropoda	Host-Associated → Arthropoda	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	86.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	6.62%
Freshwater	Environmental → Aquatic → Freshwater	2.94%
Sediment	Environmental → Aquatic → Sediment	1.47%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.47%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.74%
Roots	Host-Associated → Plants → Roots	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	79.41%
Loam	Environmental → Terrestrial → Soil → Loam	6.62%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.94%
Lake	Environmental → Aquatic → Freshwater → Lake	1.47%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.47%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.74%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	52.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.32%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.88%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.94%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.47%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.47%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.74%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.74%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	29.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.62%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.88%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.41%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.21%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.47%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.47%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.47%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.47%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.47%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	0.74%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002239	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2	Host-Associated	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021079	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Sep2016-L442-9m	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_80cm (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031058	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1040945571	3300000364	Soil	VSRRGGTGYFRTTVVVDFEYEIEDGGLPYVLCMVAYVLDENLQHVRTVRLWRGDFGVVPPFDIG
AF_2010_repII_A100DRAFT_10388261	3300000655	Forest Soil	VVLDFEYEIDTNLLPNVLCMVAYVLDENLRPVRTIRLWRGEFGSTPPFDIGSDTLIVA
AF_2010_repII_A001DRAFT_100350731	3300000793	Forest Soil	VVLDFEYEIDTNLLPNVLCMVAYVLDENLRPVRTIRLWRGEFGSTPPFD
JGI1027J12803_1002531021	3300000955	Soil	VSGSFSTIVVCDFEYEVADGDLPHVLCMVTYVLDENLRHVRTIKLWRGDFDSSAPFDTGDDTLFVAYSA
JGI1027J12803_1016126464	3300000955	Soil	VSKNFTPINVVDFEYEIEDGGLPNVLCMVVHVLNENLQHVRTVHLWRGEFGSTP
JGI1027J12803_1018355051	3300000955	Soil	VSKNFSTIAVGDFEYEIKEGDLQNPLCMVVHVLTENLQHVRTIRIWRGEFG
JGI1027J12803_1085927911	3300000955	Soil	VSKNFTEINVVDFEYEIEVGGLPRVLCMVVYVLNEFLQHVRTIRMWDGEFG
JGI10216J12902_1102855794	3300000956	Soil	MPQEVFRTTVVVDFEYEIDDGDLPRVLCMVAYVLDENLRHVATIRRWRGEFDSIPPFDVGPDTLI
JGI24034J26672_100530561	3300002239	Corn, Switchgrass And Miscanthus Rhizosphere	MYSAHFRTIVVVDFEYEIVDGGLPNVLCMVAYVLDGNLQHMDTIRLWRGEFGSTPPFDTGSDT
Ga0062387_1001720975	3300004091	Bog Forest Soil	MAETFRTINVCDFEYEAADGDLPNVLCMTVYVLDKNLRHLRTIRRWRGEFKSAPPFDIG
Ga0066395_103854921	3300004633	Tropical Forest Soil	VSDNFTNIVVVDFEYEIDDNLLPNVLCMVVYVLDEHLQHVRTIRMWRGEFGKSPPFDIGPDTLFVAYSAWA
Ga0066388_1004980711	3300005332	Tropical Forest Soil	VSKNFSTINICDFEYEVEPGGLPSVLCMVVRVLNENLQHVRTIRMWRGEFGS
Ga0066388_1030098171	3300005332	Tropical Forest Soil	VSGYFTAIVVCDFEYEITDGELPDVLCMVAHVLDQNLRHVRTIRLWCGEFGAAPPFDIS
Ga0066388_1056124831	3300005332	Tropical Forest Soil	MTGHFDTVVVCDFEYETCGGGPPPDVLCMVAHVLNSSLQHVRTFKLWRGEFGSAPPFDTG
Ga0070662_1014051111	3300005457	Corn Rhizosphere	MPSRQSCCFRTIVVVDFEYEIDDGDLPRVLCMVAYVLDVNLRLVAIIRLWRGEFGSVPPFDI
Ga0070697_1003281161	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	VSGSFSTIVVCDFEYEVADGDLPHVLCMVAYVLDENLRHVRTIKLWRGDLDSAAPFDTGD
Ga0070672_1021714472	3300005543	Miscanthus Rhizosphere	VSNIFRTIVVCDFEYEVTPGDLPNVLCMVAYVLDEQLQHMRTIRLWRGDFGTKPPFDIGPDTL
Ga0070763_106532091	3300005610	Soil	VSGHFTTIIVEDFEYEIDDNGLPDVLCMVAYVLESNLQHIRTIRLWRGEFGTEPPFDTGPDTLF
Ga0066903_1053660632	3300005764	Tropical Forest Soil	VVVDFEYEVEEGNLPNVLCMVAYVLDENLQHVRTVRLWRGEFGREPPFPIDDDILFVAYTAWA
Ga0075029_1011924832	3300006052	Watersheds	VYFTTIAVFDFEYEIENGGLPDVLCLAVYILDAHLRFVRKIQMWRGDFGRSPPFDIGPDTLCVAYSAWAEMTCFM
Ga0075029_1013568981	3300006052	Watersheds	MSNKNFGRIVVADFEFEAALGDLPNVLCLVAHVLDEKLQHVQTIKRWRGEFGSEPPFDTGPDT
Ga0070765_1018200051	3300006176	Soil	MSEDHFSQIVVADFEYELVAGGLPNPLCMVVVVLDENFRHVRTIRMWRGEFGREPPFDI
Ga0075428_1015422881	3300006844	Populus Rhizosphere	VNGYFSGTVVVDFEYEINNDLLPNVLCMVAYVLDHNLQHVRTIRLWRGEFGSVPPFDI
Ga0075424_1018358682	3300006904	Populus Rhizosphere	VSHFTSVVVADFEYEVGDGDLPNVLCMVAYVLDQNLQQVDTIKLWRGEFGREPPFDIGDDTVFVA
Ga0099827_104485741	3300009090	Vadose Zone Soil	VTADHHFEQVVVVDFEYEIEDGGLPDVLCMVAHLLNKNLQYLRTIKLWRGEFGRVPPFDTSRNT
Ga0116225_12629882	3300009524	Peatlands Soil	VSGHFTTIVVADFEYEIDDNGLPNVLCMVAYVLDSNLRHVRTIRQWRGEFGTMPPFNTGDALFVAYSA
Ga0116215_12677502	3300009672	Peatlands Soil	MSGHFTTITVCDFEYEIADGELPNVLCMVAYVLNENLQHVHTIRMWRGEFGTAPPFDIGPDSLFVAYSAWAE
Ga0126373_123617701	3300010048	Tropical Forest Soil	VSDNFTNIVVVDFEYEIDDNLLPNALCMVVYVLDEHLQHVCTIRMWRGEFGK
Ga0123356_106142073	3300010049	Termite Gut	VSDKFKSVVVCDFEYEAAPGDLPNVLCMVAYVLDENLHRVRTIRLWRGEFGSTPPFDIGPDSLFVA
Ga0126379_105908833	3300010366	Tropical Forest Soil	VSDNFTNIVVVDFEYEIDDNLLPNVLCMVVYVLDEHLQHVRTIRMWRGEFGKSPPFDIGP
Ga0126381_1005531571	3300010376	Tropical Forest Soil	MSNFATVVVCDFEYEVADGELPDVLCMVAHVLDESLWHVRTIKLWRGEFGAEPPFDIG
Ga0126381_1025238572	3300010376	Tropical Forest Soil	VSKNFTTINVVDFEYEIDDGDLPRVLCMVVYVLNENLQHVRTIRLWRGDFGSTPPFD
Ga0126381_1028882642	3300010376	Tropical Forest Soil	LNGNFKQVIVADFEYEIRDGDLPIVLCMVAYVLDEFLRHVRTIRLWRHEFGSAPPFDIDDNVLFVAY
Ga0126381_1050023831	3300010376	Tropical Forest Soil	QAVSVVSGNFGRIVVADFEYEVRNGDLPNVLCMVAYELDEHLGHLRTICRWRGDFGTAPPF*
Ga0126383_134050251	3300010398	Tropical Forest Soil	VSDNFSRVIVADFEYEVRSGDLPSVLCMVAYELNENLQHVRTIRKWRGEFDKTPPF
Ga0134121_110487131	3300010401	Terrestrial Soil	MRTNFARIVVVDFEFEVGDGDLPRPLCMVAHVLDEHLNHVRTIRRWRGEFDSRPPFDIGKDTLIVG
Ga0137393_110569721	3300011271	Vadose Zone Soil	MSRRRDHFRTIVVCDFEYECAAGGLPNVLSMVAYVLDTNLRHIRTIRLWRGDFGIAPPFDLGADSLFVAYSAWAELTC
Ga0137377_111859841	3300012211	Vadose Zone Soil	MSFASVVVCDFEYEVADGELPNVLCMVAYALDERLRHIRTIRLWRGDFGRAPPFDI
Ga0137361_109738402	3300012362	Vadose Zone Soil	VSDNFTNIVVVDFEYEIDDNLLPNVLCMVVYVLDEHLQHVRTIRMWRGEFGKSPPF
Ga0137358_110920662	3300012582	Vadose Zone Soil	VSKNFATINIVDFEYEIEDGGLPNVLCMVVHVLDENLRHVRTIRMWREELLALTCLPFDTGPNALFVAYS
Ga0137359_107160542	3300012923	Vadose Zone Soil	VSNFTTVVVVDFEYEIDDNNLPNVLCMVAHVLNENLQHVRTIRMWRGEFGKTPPFDIGDD
Ga0137413_112089761	3300012924	Vadose Zone Soil	VVDFEYECLPGGLPTVLCMVAYVLNEDLKHIRTIRLWRGQFGPRPPFP
Ga0164302_106309471	3300012961	Soil	VSNVKTVVVVDFEYEVDAGDLPRPLCMVLEVLDEHLQHVRTERRWRGEFDKKPPFDIGPDALVVFYA
Ga0164307_110404011	3300012987	Soil	MTAPGVENCFRTITVVDFEYEIDDGGLPRVLCMVAYVLDWNLRHIRTIRLWRGEFGATPPFDIGPDALIVGYAL
Ga0164305_107795832	3300012989	Soil	VSSFRRTIVVDFEYEVDAGELPRPVCMVAAVLDEHLEHVETITLFEGEFGDKPPFDIGPETV
Ga0163163_112642442	3300014325	Switchgrass Rhizosphere	MYSAHFRTIVVVDFEYEIVDGGLPNVLCMVAYVLDGNLQHMDTIRLWRGEFGSTPPFDTGSDTLIVGY
Ga0157376_116626671	3300014969	Miscanthus Rhizosphere	VRRPRVEDCFRTVTVIDFEYEVGDGDLPNVLCMVAYVLDENLWHVDTIRRWRGEFGSTPPFDNGPDAL
Ga0157376_116802122	3300014969	Miscanthus Rhizosphere	MRTNFARIVVVDFEFEVGDGDLPRPLCMVAHVLDEHLNHVRTIRRWRGEFDSRPPFDIGKDTLIVGYSL
Ga0132256_1022130932	3300015372	Arabidopsis Rhizosphere	MPNRESVCFRTIIVVDFEYEIDDGDLPRVLCMVAHILNARLQRVTIIRRWRGQFGSTPPFDVGPDT
Ga0132255_1057133112	3300015374	Arabidopsis Rhizosphere	MGENFATIVVCDTEYEVETGELPKVLCLVAYVLNEKLQRVRTVRLWRGEFGASPPFDIGPNTLFVA
Ga0182036_106867222	3300016270	Soil	VSDEYFKEVVVVDFEYENDANNLPNVLCMVVYVLDAMLRHVRTIRLWRGDFGTAPP
Ga0182041_112954331	3300016294	Soil	MSGSFSRIIVADFEYEVRDGDLPNVLCMVAYELDEHLRHQRTIRLWRGDFGTAPPF
Ga0182033_113666871	3300016319	Soil	VSKNFITINICDFEYEVESGGLPRVLCMVVYVLNENLQHVRTIRMWRGEFG
Ga0182033_117356853	3300016319	Soil	MSSYFTQVVVADFEYEVSSGNLPEVLCMVAYLLDENLQHVRTVRMWRGEFGAAPPFDINSNT
Ga0182033_120103361	3300016319	Soil	VSKNFGTINVCDFEYEVEAGGLPRVLCMVVYVLNESLKHVRTIRMGRGEFCSTPPFDVGRDALFVAYSA
Ga0182035_101070922	3300016341	Soil	MGENFATIVVCDTEYEVESGELPKVLCLVAYVLNEKLQRVRTVRLWRGEFGASPPFDIGPDTLFVA
Ga0182035_113994922	3300016341	Soil	VSKNFREVIVYDFEYEVTPGDLPNVVCMVAYVLDENLRHVRTFRLWRGAFSSTPPFDVG
Ga0182035_119718111	3300016341	Soil	VSKNFTTINICDFEYEVEPGGLPRVLCMVVYVLNEVLQHVRTIRMWREEFGSIPPFDIG
Ga0182032_103298193	3300016357	Soil	VSKNFITINICDFEYEVEPGGLPRVLRMVVYVLNETLHHVRTIRMWRGEFGSIPPFDIDPDSLFVAYSAWA
Ga0182032_104976522	3300016357	Soil	VSENFHEVVVCDFEYEVTPGDLPNVLCMVAYILDENLRHARTIRLWRGDFGTAPPFDTGPDALF
Ga0182032_110699152	3300016357	Soil	VSKNFITINVCDFEYEIEPGGLPRVLCMVVCVLNENLRHVRTIMMWRGEFGSTPPFDMGSDALFVAYSAWAELT
Ga0182032_112957641	3300016357	Soil	MTDNFGSVVVCDFEYEVAPGDLPNVLCMVAYVLDENLRRVRTIRLWRGEFGSTPPFDVGP
Ga0182034_113147261	3300016371	Soil	MTDNFGSVVVCDFEYEVAPGDLPNVLCMVAYVLDENLRHERTIRVWRGEFRRTPPFDVGP
Ga0182040_100613961	3300016387	Soil	VSEFFREVVVCDFEYEIEDGNLPNPLCMVAHVLDENLRHVRTVRLWRDDFDTAPPFDTGD
Ga0182040_106865321	3300016387	Soil	VSKNFGTIVVCDFEYEVASGSMPNVLCMVAYVLDEQLEHVHTVRLWRGDFGSVPPFDTGPDALF
Ga0182040_110480362	3300016387	Soil	MSNFGTVVVCDFEYEVAPGDLPHVLCMVAQVLDENLQHLRTIRLWRGEFGSAPPFDIGPDSLFVAY
Ga0182040_113569101	3300016387	Soil	MSGNFGSTVVCDFEYEAAPGDLPNPLCMVAYVLDEYLRHVRTIRVWRGEFGPTPPFDISP
Ga0182040_114846082	3300016387	Soil	MSGNFPNIVVGDFEYEVPDGGLPDVLCGVYYLLDENLRHVRTVRQWRGEFGATPPFDVGPDT
Ga0182039_106526063	3300016422	Soil	VSKNFASVIVCDFEYEVSAGDLPDPLCMVAFVLDEGLRHVRTVRLWRGEFGAAPPFDVSPNSLFVAYSAWAE
Ga0182039_112069741	3300016422	Soil	VSKNFITINICDFEYEVEPGGLPRVLCMVVYVLNEFLQHVRTIRMWRGEFGSIPPFDIGPDALFVAYS
Ga0182039_119739682	3300016422	Soil	MSGNFRTIVVCDFEYEVAPGDLPNVLCMVAYVLDENLRYVHTIRLWRGEFGPAPPFDVGPDSLFVAYSAWAEM
Ga0182039_120703461	3300016422	Soil	VSGNFGTIVVCDFEYEVAPGDLPNVLCMVTHVLDENLRLVRTIRLWRGDFGSTPPFDIGDDSLFVAYSAWAE
Ga0182038_115487491	3300016445	Soil	VSRNFGRIIVADFEYEIRGGDLPNVLCMVAHELDEHLRHVCTIRKWRGEFGPSPPFDIGDDT
Ga0190274_125213701	3300018476	Soil	MYSAHFRTIVVVDFEYEIVDGGLPNVLCMVAYVLDGNLQHMDTIRLWRGEFGSTPPFDTGSD
Ga0190274_130184891	3300018476	Soil	MSPANVEDCFRTIVVVDFEYEIDDGDLPNVLCLVAYVLDANLRHVGTTRIWHGEFGPTPP
Ga0210401_112677792	3300020583	Soil	MRNFGTIVVCDFEYEVADGGLPNVLCMVAYVLDEGLRHVRTVRQWRGEFGSAPPFD
Ga0194055_103392522	3300021079	Anoxic Zone Freshwater	VSGNFATINVCDFEYEVADGDLPNVLCMVVYVLDENLQHVRTIRVWRGDFGSAPPFDVGPNALFVAYSAWAE
Ga0210390_107456502	3300021474	Soil	VSAHFGRFVVLDFEYEIEAGDLPRVLCMVADVFDEHLRPTRTIKLWRGEFGPAPPFDIDDDTLVIGY
Ga0126371_123969221	3300021560	Tropical Forest Soil	VSEFFREVVVCDFEYEIEDGNLPNPLCMVAHVLDENLRHVRTVRLWRDDFDTAPPFDTGDDTL
Ga0207706_115257602	3300025933	Corn Rhizosphere	VSKNFSTINICDFEYEVEPSGLPRVLCMVVYVLNENLQHVRTIRMWRGESGSTPPFDVG
Ga0207678_111551552	3300026067	Corn Rhizosphere	MRTNFARIVVVDFEFEVGDGDLPRPLCMVAHVLDEHLNHVRTIRRWRGEFDSRPPFDIGKDTL
Ga0209240_10118357	3300026304	Grasslands Soil	VTADHHFEQVVVVDFEYEIEDGGLPDVLCTVAHLLNKNLQYLRTIKLWRGEFGRVPPF
Ga0209656_105109382	3300027812	Bog Forest Soil	VSETFSQVVVCDFEYEIEPGGLPNVLCMVAYVLDENLQHVRTIHWWRGEFGKVPPFDTGPDTLF
Ga0209465_103246621	3300027874	Tropical Forest Soil	VSDNFTNIVVVDFEYEIDDNLLPNVLCMVVYVLDEHLQHVRTIRMWRGEFGKSPPFDIGPDTLFVA
Ga0209488_107622412	3300027903	Vadose Zone Soil	VSKYFTTINVVDFEYEVGDGDLPNMLCMVVHVLDSHLRHIRTIRMWRGEFGKTPPFDIGP
Ga0209488_107649481	3300027903	Vadose Zone Soil	VTADHHFEQVVVVDFEYEIEDGGLPDVLCMVAHLLNKNLQYLRTIKLWRGEFGRVPPFDT
Ga0307282_106059492	3300028784	Soil	VSKYFTTINVVDSEYEVGDGDLPNMLCMVVHVLDSHLRHIRTIRMWRGEFGKTPPFDI
Ga0307296_107481981	3300028819	Soil	VSKNFTTINIVDFEYEIEAGGLPRVLCMVVYVLNEFLQHVRTIRMWRGEFGSTPPFDIGPDALFV
Ga0308189_105073732	3300031058	Soil	VSDNFSRFIVADFEYEVRGGELPSVLCMVAYELNENLQPVRTIRKWRGEFDKTPPFDIGD
Ga0318516_102342121	3300031543	Soil	VKKCFTTINIVDFEYEIDDGDLPRVLCMVVYVLDSHLRHIRTIRLWRGDFGKTPPFDIGPDALFV
Ga0318560_106130762	3300031682	Soil	VKKCFTTINIVDFEYEIDDGDLPRVLCMVVYVLDSHLRHIRTIRLWRGDFGKTPPFDIGPDALF
Ga0310686_1146903342	3300031708	Soil	VNGHFTAIVVADFEYEIDDNGLPNVLCMVAYVLDSNLRHVRTIRMWRGEFGTMPPFDTGPDRALLLLTPPGRR
Ga0318500_103057911	3300031724	Soil	VRKNFGRVVVLDFEYEIDTNLLPNVLCMVAYVLDENLRPVRTIRLWRGEFGSTPPFDTGSDTLIVAYSAW
Ga0306918_100412991	3300031744	Soil	MSGGNFDQVVVVDFEYEAGASDLPQPLCMVAYVLNENLQHVRTIHLWRGEFGSAPPFDIGPNT
Ga0306918_106267891	3300031744	Soil	VSDEYFKEVVVVDFEYENDANNLPNVLCMVVYVLDAMLRHVRTIRLWRGDFGTAPPFDI
Ga0306918_114780971	3300031744	Soil	MSSNFARIIVADFEYEVRDDELPNVLCLVAYELDEHLRHVRTIRLWRGEFGTTPPF
Ga0318502_109324251	3300031747	Soil	VSKNFITINICDFEYEVESGGLPRVLCMVVYVLNENLQHVRTIRMWRGEFGLI
Ga0318535_101902801	3300031764	Soil	MQRPEPVDCFRSVTVVDFEYEIDDGDLPRVLCMVAYVLDQNLRHVRTIRLWRGEFPSTPPFDIDIGS
Ga0318554_106690082	3300031765	Soil	VRKNFGRVVVLDFEYEIDTNLLPNVLCMVAYVLDENLRHVRTIRLWRGEFGSMPPFDIGSDTLIIAYSA
Ga0318509_100404353	3300031768	Soil	VSGNFAQIVVVDFEYEVSNGNLPNPLCMVAHVLDENLQHVRTIRMWRGEFGTAPPFDIS
Ga0318567_100790581	3300031821	Soil	VKKCFTTINIVDFEYEIDDGDLPRVLCMVVYVLDSHLRHIRTIRLWRGDFG
Ga0318511_102772851	3300031845	Soil	VSENFASVVACDFEYEVTDGDLPNPLCMVAYVLDENLRHVRTIRMWRDDFGTSPPFDIGPGALLVAYSAWAEMTCFKVLD
Ga0318512_103693701	3300031846	Soil	VSENFREVVVCDFEYEVTPGDLPNVLCMVAYILDENLRHVRTIRLWRGDFGTAPPFDTGPDAL
Ga0306919_105870852	3300031879	Soil	VVVLDFEYEIDTNLLPNVLCMVAYVLDENLRHVRTIRLWRGEFGSMPPFDIG
Ga0306919_113868812	3300031879	Soil	VSGNFTNVIVGDFEYEVTGGDLPNVLCMVAHVLNENLQYVRTIRTWRGEFGSTPPFDIGP
Ga0306925_105569053	3300031890	Soil	VSENFGTVVVCDFEYESAPGELPDVLCMVAHVLDEHLRHVHTIRLWRGEFGSTPQFDVGPDALFV
Ga0306925_119673822	3300031890	Soil	MSGNFRSVVIGDFEYEVAPGDLPNPLCFVAHVLDETLQHVHTVRLWRGEFGSAPPFDIGPNTCFVAY
Ga0318520_108033362	3300031897	Soil	VKKCFTTINIVDFEYEIDDGDLPRVLCMVVYVLDSHLRHIRTIRLWRGDFGKTPPFDVGPDALFV
Ga0306923_104446281	3300031910	Soil	VSKNFITINICDFEYEVEPGGLPRVLCMVVYVLNEFLQHVRTIRMWRGEFGS
Ga0306923_114081182	3300031910	Soil	MSNFGTVVVCDFEYEVASGDLPDVLCMVAHVLDENLQHVRTVRLWRGEFGSVPPFDIGPDSLFVAYSAWAE
Ga0306921_101736071	3300031912	Soil	VSENFASVVACDFEYEVTDGDLPNPLCMVAYVLDENLRHVRTIRMWRDDFGTSPPFDIGPGALLVAYSAW
Ga0306921_104607025	3300031912	Soil	MSSYFTQVVVADFEYEVSSGNLPEVLCMVAYLLDENLQHGRTIRMWRGEFGAAPPF
Ga0306921_106672241	3300031912	Soil	VKKCFTTINIVDFEYEIDDGDLPRVLCMVVYVLDSHLRHIRTIRLWRGDFGK
Ga0310912_104136763	3300031941	Soil	MSNFKHIVVCDFEYEIADGNLPDVLCTVAQVLDENFQLLRTIKLWRGEFGAEPPFDI
Ga0310912_106105351	3300031941	Soil	VNDKFGSVVVVDFEFEVTANNLPNPLCMVAYVLDGNLRYVRTMRLWRGEFGPAPPFNIGPDSL
Ga0310912_108826371	3300031941	Soil	VSRNFITINICDFEYEVEPGGLPRVLCMVVYVLNEFLQHVRTSRMWRGEFESIPPFDIGP
Ga0310916_114370272	3300031942	Soil	MKRDCFRQIVVVDTEYEVEDGGLPNLLCLVAYVLDGKLRHVRTIRKWRGEFGSEPP
Ga0310916_116846712	3300031942	Soil	MSETFGRIVVCDFEYEVTPGNLPQPLCMVASVLDQHLEQVSTIVRWRGEFGCEPPFDIGPDTLFCAYAAWAELTCFQ
Ga0310916_117432051	3300031942	Soil	VSKNFGTINVCDFEYEVEAGGLPRVLCMVVYVLNESLKHVRTIRMGRGEFGSTP
Ga0310913_103119453	3300031945	Soil	VKKCFTTINIVDFEYEIDDGDLPRVLCMVVYVLDSHLRHIRTIRLWRGDFGKIPPFDI
Ga0310910_103411672	3300031946	Soil	VSDNFRSVAVCDFEYEVEPGDLPDVLCMVAYVLDENLRHLRTVRLWRGEFGSTPPFD
Ga0310910_113929431	3300031946	Soil	MTGNFGRIVVADFEYEIRDGDLPDVLCMVAYELDEHLQPVRTIRKWRGEFESVPPFDIGD
Ga0310909_107272652	3300031947	Soil	VSDNFRSVAVCDFEYEVEPGDLPDVLCMVAYVLDENLRHLRTVRLWRGEFGSTPPFDVGPDSLFVGYSAW
Ga0306926_122797542	3300031954	Soil	VSKNFITINICDFEYEVEPGGLPRVLCMVVYVLNEFLQHVRTIRMWRGEFGSIPPFDIGPDALFVAYSAW
Ga0318507_102965711	3300032025	Soil	VKVFDQVVVLDFEYEIEDGGLPNILCMVAYVLDQNLQHVRTIRLWRGEFGRGPPFDVGSD
Ga0310911_103739152	3300032035	Soil	VSNFKSVVAVDFEYEAADGDLPNVLCMVAHVLDENLRHVRTVKLWQGEFGAAPPFD
Ga0318545_102414222	3300032042	Soil	VSDNFGPIVVCDFEYEVADGDLPDPLCMVAHVLDEKLRHVRTIRLWRGEFGAEPPFDIGPDALFVA
Ga0318545_102562421	3300032042	Soil	VSENFGTIVVCDFEYEVEPGDLPNVLCMVAHVLDENLQHVRTIRLWRGEFDPTPPFDIG
Ga0318556_103043071	3300032043	Soil	VKKCFTTINIVDFEYEIDDGDLPRVLCMVVYVLDSHLRHIRTIRLWRGDFGKTPPFDIGPDALFVAY
Ga0318533_100599211	3300032059	Soil	VKKCFTTINIVDFEYEIDDGDLPCVLCMVVYVLDSHLRHIRTIRLWRGDFGKTPPFDIGPDALFV
Ga0318533_108673252	3300032059	Soil	VRGPRVEDCFHTLTVIDFEYEVDDGDLPKVLCMVAYMLDENLRRVETIRRWRGEFGSTPPFDIGPD
Ga0306924_116993331	3300032076	Soil	VSQSFGQIVVCDFEYEAEAGSLPNVLCMVAYVLDENLQHVCTVRLWRGDFGSAPPFDTDDNC
Ga0306924_124634732	3300032076	Soil	MSSNFARIIVADFEYEVRDDELPNVLCLVAYELDEHLRHVRTIRLWRGDFGTAPPF
Ga0315277_107224971	3300032118	Sediment	MSGNFGTVVVADFEYEVGGGELPNVLCLVAHILDEQLEHVRTIRLWRGEFGATPPFDI
Ga0306920_1006326131	3300032261	Soil	VSKNFASVIVCDFEYEVSAGDLPDPLCMVAFVLDEGLRHVRTVRLWRGEFGAAPPFDVSPNSLFVAYSAWA
Ga0306920_1018525262	3300032261	Soil	MSNNFGRIIVADFEYEVRDGELPNVLCLVANELDEHLQHVRTIRLWRGDFGTTPPFRHRPRH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057518

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences