Metagenome Family F057575

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057575
Family Type	Metagenome
Number of Sequences	136
Average Sequence Length	97 residues
Representative Sequence	MRRLILSTLAVLGLASPASADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVAEEPGASFNGADADRTMRGQCLAENVDPRTTAAK
Number of Associated Samples	113
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.35 %
% of genes near scaffold ends (potentially truncated)	35.29 %
% of genes from short scaffolds (< 2000 bps)	76.47 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (68.382 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (17.647 % of family members)
Environment Ontology (ENVO)	Unclassified (33.824 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.118 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 21.26% β-sheet: 24.41% Coil/Unstructured: 54.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF02954	HTH_8	17.65
PF06170	DUF983	5.88
PF12867	DinB_2	4.41
PF01599	Ribosomal_S27	3.68
PF01068	DNA_ligase_A_M	2.94
PF02128	Peptidase_M36	2.21
PF04392	ABC_sub_bind	1.47
PF13185	GAF_2	1.47
PF00072	Response_reg	0.74
PF00106	adh_short	0.74
PF00903	Glyoxalase	0.74
PF07238	PilZ	0.74
PF06078	DUF937	0.74
PF01717	Meth_synt_2	0.74
PF08448	PAS_4	0.74
PF01208	URO-D	0.74
PF08240	ADH_N	0.74
PF09370	PEP_hydrolase	0.74
PF00920	ILVD_EDD	0.74
PF02596	DUF169	0.74
PF01425	Amidase	0.74
PF04237	YjbR	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG5349	Uncharacterized conserved protein, DUF983 family	Function unknown [S]	5.88
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	2.94
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	2.94
COG0129	Dihydroxyacid dehydratase/phosphogluconate dehydratase	Carbohydrate transport and metabolism [G]	1.47
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	1.47
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.74
COG0407	Uroporphyrinogen-III decarboxylase HemE	Coenzyme transport and metabolism [H]	0.74
COG0620	Methionine synthase II (cobalamin-independent)	Amino acid transport and metabolism [E]	0.74
COG2043	Uncharacterized conserved protein, DUF169 family	Function unknown [S]	0.74
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.74
COG3753	Uncharacterized conserved protein YidB, DUF937 family	Function unknown [S]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	68.38 %
Unclassified	root	N/A	31.62 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	68.38 %
Unclassified	root	N/A	31.62 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	68.38 %
Unclassified	root	N/A	31.62 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.62 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	16.18 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	6.62 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.15 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.62 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	16.18 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	6.62 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.62 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	15.44 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	2.21 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.74 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.62 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	14.71 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	2.21 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.74 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.62 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	14.71 %
unclassified Gemmatimonadales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales	1.47 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	0.74 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.74 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.62 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	14.71 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1.47 %
unclassified Gemmatimonadaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae	0.74 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.74 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	31.62 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	14.71 %
Gemmatimonadales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	1.47 %
Gemmatimonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	0.74 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.74 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090015\|GPICI_8845556	All Organisms → cellular organisms → Bacteria → Proteobacteria	4346	Open in IMG/M
3300002245\|JGIcombinedJ26739_101134173	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	670	Open in IMG/M
3300002245\|JGIcombinedJ26739_101232918	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → unclassified Gemmatimonadaceae → Gemmatimonadaceae bacterium	638	Open in IMG/M
3300002886\|JGI25612J43240_1077295	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	523	Open in IMG/M
3300002914\|JGI25617J43924_10149693	Not Available	803	Open in IMG/M
3300003324\|soilH2_10030017	All Organisms → cellular organisms → Bacteria	3672	Open in IMG/M
3300004114\|Ga0062593_100752980	All Organisms → cellular organisms → Bacteria	960	Open in IMG/M
3300004114\|Ga0062593_101090447	Not Available	828	Open in IMG/M
3300004480\|Ga0062592_100205140	All Organisms → cellular organisms → Bacteria	1395	Open in IMG/M
3300005093\|Ga0062594_102053057	Not Available	613	Open in IMG/M
3300005174\|Ga0066680_10153513	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300005293\|Ga0065715_10144200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1789	Open in IMG/M
3300005294\|Ga0065705_10072948	All Organisms → cellular organisms → Bacteria	721	Open in IMG/M
3300005341\|Ga0070691_10520446	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300005367\|Ga0070667_100190282	All Organisms → cellular organisms → Bacteria	1818	Open in IMG/M
3300005439\|Ga0070711_100235671	All Organisms → cellular organisms → Bacteria	1429	Open in IMG/M
3300005440\|Ga0070705_100085086	All Organisms → cellular organisms → Bacteria	1953	Open in IMG/M
3300005440\|Ga0070705_100368911	All Organisms → cellular organisms → Bacteria	1053	Open in IMG/M
3300005444\|Ga0070694_101436876	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	583	Open in IMG/M
3300005445\|Ga0070708_100452437	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300005467\|Ga0070706_101711704	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	572	Open in IMG/M
3300005526\|Ga0073909_10443260	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	619	Open in IMG/M
3300005529\|Ga0070741_10007456	All Organisms → cellular organisms → Bacteria	22610	Open in IMG/M
3300005546\|Ga0070696_100570283	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300005568\|Ga0066703_10242774	Not Available	1094	Open in IMG/M
3300005834\|Ga0068851_10972864	Not Available	534	Open in IMG/M
3300005843\|Ga0068860_100198673	Not Available	1943	Open in IMG/M
3300005985\|Ga0081539_10351756	Not Available	619	Open in IMG/M
3300006047\|Ga0075024_100570071	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	604	Open in IMG/M
3300006057\|Ga0075026_100767474	Not Available	582	Open in IMG/M
3300006175\|Ga0070712_100115831	All Organisms → cellular organisms → Bacteria	2009	Open in IMG/M
3300006755\|Ga0079222_10107457	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300006806\|Ga0079220_10422244	All Organisms → cellular organisms → Bacteria	880	Open in IMG/M
3300006847\|Ga0075431_101033323	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300006954\|Ga0079219_10026149	All Organisms → cellular organisms → Bacteria	2241	Open in IMG/M
3300006954\|Ga0079219_11488192	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300007265\|Ga0099794_10215013	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300007788\|Ga0099795_10338487	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	670	Open in IMG/M
3300009038\|Ga0099829_10029657	All Organisms → cellular organisms → Bacteria	3885	Open in IMG/M
3300009147\|Ga0114129_10216595	All Organisms → cellular organisms → Bacteria	2586	Open in IMG/M
3300009147\|Ga0114129_10314737	All Organisms → cellular organisms → Bacteria	2083	Open in IMG/M
3300009148\|Ga0105243_10510027	All Organisms → cellular organisms → Bacteria	1141	Open in IMG/M
3300009162\|Ga0075423_10497612	All Organisms → cellular organisms → Bacteria	1282	Open in IMG/M
3300010397\|Ga0134124_10332503	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1426	Open in IMG/M
3300010400\|Ga0134122_13329900	Not Available	505	Open in IMG/M
3300011269\|Ga0137392_10001264	All Organisms → cellular organisms → Bacteria	14436	Open in IMG/M
3300011269\|Ga0137392_11560423	Not Available	519	Open in IMG/M
3300011270\|Ga0137391_10019857	All Organisms → cellular organisms → Bacteria	5534	Open in IMG/M
3300012202\|Ga0137363_10019509	All Organisms → cellular organisms → Bacteria	4519	Open in IMG/M
3300012203\|Ga0137399_11361178	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	595	Open in IMG/M
3300012205\|Ga0137362_10043228	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3639	Open in IMG/M
3300012208\|Ga0137376_11287908	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	621	Open in IMG/M
3300012358\|Ga0137368_10440019	Not Available	849	Open in IMG/M
3300012360\|Ga0137375_10095081	Not Available	3055	Open in IMG/M
3300012362\|Ga0137361_10909236	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	798	Open in IMG/M
3300012363\|Ga0137390_11477995	Not Available	621	Open in IMG/M
3300012685\|Ga0137397_10029380	All Organisms → cellular organisms → Bacteria	3906	Open in IMG/M
3300012923\|Ga0137359_10358774	Not Available	1295	Open in IMG/M
3300012927\|Ga0137416_10307722	Not Available	1316	Open in IMG/M
3300012929\|Ga0137404_10389874	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300012955\|Ga0164298_11692855	Not Available	502	Open in IMG/M
3300012957\|Ga0164303_10481395	All Organisms → cellular organisms → Bacteria	789	Open in IMG/M
3300012957\|Ga0164303_11451970	Not Available	516	Open in IMG/M
3300012960\|Ga0164301_10014825	All Organisms → cellular organisms → Bacteria → Proteobacteria	3293	Open in IMG/M
3300012988\|Ga0164306_11421967	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300012989\|Ga0164305_10074027	All Organisms → cellular organisms → Bacteria	2093	Open in IMG/M
3300018076\|Ga0184609_10266514	Not Available	801	Open in IMG/M
3300018422\|Ga0190265_10034367	All Organisms → cellular organisms → Bacteria → Proteobacteria	4257	Open in IMG/M
3300018422\|Ga0190265_12349370	Not Available	634	Open in IMG/M
3300019360\|Ga0187894_10332681	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300019458\|Ga0187892_10004370	All Organisms → cellular organisms → Bacteria → Proteobacteria	23833	Open in IMG/M
3300019870\|Ga0193746_1018976	All Organisms → cellular organisms → Bacteria	714	Open in IMG/M
3300019877\|Ga0193722_1009861	All Organisms → cellular organisms → Bacteria	2426	Open in IMG/M
3300019879\|Ga0193723_1032348	Not Available	1572	Open in IMG/M
3300019882\|Ga0193713_1062887	Not Available	1056	Open in IMG/M
3300019883\|Ga0193725_1068493	Not Available	879	Open in IMG/M
3300019886\|Ga0193727_1109941	Not Available	802	Open in IMG/M
3300019999\|Ga0193718_1089834	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300020004\|Ga0193755_1040404	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300021086\|Ga0179596_10028585	All Organisms → cellular organisms → Bacteria	2122	Open in IMG/M
3300021344\|Ga0193719_10461092	Not Available	516	Open in IMG/M
3300021404\|Ga0210389_10850537	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	711	Open in IMG/M
3300021445\|Ga0182009_10000705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	8006	Open in IMG/M
3300024330\|Ga0137417_1228798	Not Available	544	Open in IMG/M
3300025315\|Ga0207697_10179142	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300025899\|Ga0207642_10568923	Not Available	702	Open in IMG/M
3300025899\|Ga0207642_10769207	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300025910\|Ga0207684_10153711	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1980	Open in IMG/M
3300025910\|Ga0207684_10209559	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1681	Open in IMG/M
3300025912\|Ga0207707_10726518	All Organisms → cellular organisms → Bacteria	832	Open in IMG/M
3300025924\|Ga0207694_10285564	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300025935\|Ga0207709_10977035	Not Available	691	Open in IMG/M
3300025944\|Ga0207661_11398175	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300025961\|Ga0207712_10988961	Not Available	746	Open in IMG/M
3300026075\|Ga0207708_10247048	Not Available	1437	Open in IMG/M
3300026088\|Ga0207641_10657763	All Organisms → cellular organisms → Bacteria	1029	Open in IMG/M
3300026285\|Ga0209438_1008038	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	3567	Open in IMG/M
3300026320\|Ga0209131_1002763	All Organisms → cellular organisms → Bacteria	11821	Open in IMG/M
3300026359\|Ga0257163_1004082	All Organisms → cellular organisms → Bacteria	2033	Open in IMG/M
3300026371\|Ga0257179_1012688	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	903	Open in IMG/M
3300026371\|Ga0257179_1024682	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	713	Open in IMG/M
3300026482\|Ga0257172_1003376	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2236	Open in IMG/M
3300026489\|Ga0257160_1043547	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	765	Open in IMG/M
3300026496\|Ga0257157_1001150	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	3469	Open in IMG/M
3300026508\|Ga0257161_1001635	All Organisms → cellular organisms → Bacteria	4023	Open in IMG/M
3300026514\|Ga0257168_1014471	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1560	Open in IMG/M
3300026551\|Ga0209648_10803070	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → unclassified Gemmatimonadales → Gemmatimonadales bacterium	514	Open in IMG/M
3300026557\|Ga0179587_10365749	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	937	Open in IMG/M
3300026557\|Ga0179587_10520146	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	781	Open in IMG/M
3300027651\|Ga0209217_1065108	Not Available	1078	Open in IMG/M
3300027651\|Ga0209217_1169968	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	597	Open in IMG/M
3300027765\|Ga0209073_10086346	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300027765\|Ga0209073_10236244	Not Available	706	Open in IMG/M
3300027775\|Ga0209177_10375568	Not Available	563	Open in IMG/M
3300027787\|Ga0209074_10275654	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	663	Open in IMG/M
3300027894\|Ga0209068_10006323	All Organisms → cellular organisms → Bacteria → Proteobacteria	5587	Open in IMG/M
3300028380\|Ga0268265_10050083	All Organisms → cellular organisms → Bacteria	3145	Open in IMG/M
3300028536\|Ga0137415_10326382	Not Available	1338	Open in IMG/M
3300028536\|Ga0137415_10424427	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1135	Open in IMG/M
3300028792\|Ga0307504_10023438	Not Available	1562	Open in IMG/M
3300028792\|Ga0307504_10262795	Not Available	636	Open in IMG/M
3300028812\|Ga0247825_10141954	All Organisms → cellular organisms → Bacteria	1643	Open in IMG/M
3300031720\|Ga0307469_10003043	All Organisms → cellular organisms → Bacteria	6953	Open in IMG/M
3300031720\|Ga0307469_10273207	Not Available	1375	Open in IMG/M
3300031720\|Ga0307469_12370100	Not Available	518	Open in IMG/M
3300031740\|Ga0307468_100121224	All Organisms → cellular organisms → Bacteria	1610	Open in IMG/M
3300031740\|Ga0307468_100257770	Not Available	1232	Open in IMG/M
3300031740\|Ga0307468_102432821	Not Available	511	Open in IMG/M
3300032174\|Ga0307470_10154689	Not Available	1407	Open in IMG/M
3300032180\|Ga0307471_100138875	All Organisms → cellular organisms → Bacteria	2310	Open in IMG/M
3300032180\|Ga0307471_100266304	Not Available	1778	Open in IMG/M
3300032180\|Ga0307471_100319954	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1648	Open in IMG/M
3300032205\|Ga0307472_100007272	All Organisms → cellular organisms → Bacteria	5290	Open in IMG/M
3300032205\|Ga0307472_100713205	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	904	Open in IMG/M
3300033551\|Ga0247830_11678730	Not Available	509	Open in IMG/M
3300034817\|Ga0373948_0113432	Not Available	649	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.03%
Host-Associated	Host-Associated	13.97%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.09%
Plants	Host-Associated → Plants	13.97%
Aquatic	Environmental → Aquatic	2.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	81.62%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.62%
Sediment	Environmental → Aquatic → Sediment	2.94%
Cave	Environmental → Terrestrial → Cave	1.47%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	68.38%
Loam	Environmental → Terrestrial → Soil → Loam	13.24%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.94%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	1.47%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.29%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	9.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	5.88%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.88%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.47%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	1.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	17.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.97%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	8.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.62%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	5.88%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.94%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.21%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.21%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.47%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.47%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.47%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.47%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.74%
Microbial Mat On Rocks	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Microbial Mat On Rocks	0.74%
Bio-Ooze	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Bio-Ooze	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.74%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090015	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002886	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm	Environmental	Open in IMG/M
3300002914	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005985	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300019360	White microbial mat communities from a lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - GBC170108-1 metaG	Environmental	Open in IMG/M
3300019458	Bio-ooze microbial communities from a basaltic lava cave in the Kipuka Kanohina Cave System on the Island of Hawaii, USA - MA170107-3 metaG	Environmental	Open in IMG/M
3300019870	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m1	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019879	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2	Environmental	Open in IMG/M
3300019882	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2	Environmental	Open in IMG/M
3300019883	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a2	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300019999	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021086	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025924	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026285	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cm (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026359	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-A	Environmental	Open in IMG/M
3300026371	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-B	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300026489	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-A	Environmental	Open in IMG/M
3300026496	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-A	Environmental	Open in IMG/M
3300026508	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-01-A	Environmental	Open in IMG/M
3300026514	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-13-B	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027651	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027765	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPICI_01882190	2088090015	Soil	MHRLILTTLALLLATASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAVDTDRTFKGQCLIENADPRTSAAK
JGIcombinedJ26739_1011341731	3300002245	Forest Soil	MHRLMLPMLAVLVLASPVSADGGWVLWIMGGDSPWDSVSTFATREECATAMHQQAQALEKMGLRVSEQPGASFSGADAERSMRGQCLAESVDPRTTAAK*
JGIcombinedJ26739_1012329182	3300002245	Forest Soil	MRRLLVSTLAVLALASPASADGGWVLWIMGGDSPWDSVSTFATREECAVALHQQVQALEKMGLRVSEEPGVSFNGADADRTMRGQCLAESVDPRTAAAK*
JGI25612J43240_10772952	3300002886	Grasslands Soil	MRRLILSTLAVVGLASPASADGGWVLWMMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEPGASFNGADADRTMRGQ
JGI25617J43924_101496932	3300002914	Grasslands Soil	MRRLILPTLVVLAVASPVTADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEAGVSFNGADADRTMRGQCLAESVDPRTSAAK*
soilH2_100300174	3300003324	Sugarcane Root And Bulk Soil	MHRLIPTTLVLLLATATPALADGWVLWIQGGDSPWDSVSTFSSREECAGALHQQAQAVEKLGLKVTETPGASFAATDTDRTFKGQCLAENADPHATAAK*
Ga0062593_1007529803	3300004114	Soil	MGRLILFTISILVLATPVSADGKWVLWMMGGDSPWDSVSAFPTREECAAAMHQQAQALERMGLRVTEDAAGPSFSGTDADRAMLGQCLAENLDPRASAAK*
Ga0062593_1010904472	3300004114	Soil	MHRLILTTLALLLATASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAVDTDRTFKGQCLIENADPRTSAAK*
Ga0062592_1002051401	3300004480	Soil	MGRLILFTISILVLATPVSADGKWVLWMMGGDSPWDSVSAFPTREECAAAMHQQAQALERMGLRVTEDAAGPSFSGTDADRAMRGQCLAENLDPRASAAK*
Ga0062594_1020530571	3300005093	Soil	MHRLILTTLALLLATASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLIENADPRTSAAK*
Ga0066680_101535131	3300005174	Soil	MRRLILPTLVVLAVASPVSADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEAGVSFNGADADRTMRGQCLAESVDPRTSAAK*
Ga0065715_101442003	3300005293	Miscanthus Rhizosphere	MHRLILTTLALLLASASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAVDTDRTFKGQCLIENADPRTSAAK*
Ga0065705_100729482	3300005294	Switchgrass Rhizosphere	MGRLILFTISILVLATPVSADGKWVLWMMGGDSPWDSVSAFPTREECAAAMHQQAQALERMGLRVTEDAAGPSFSGTDADRAMXGQCLAENLDPRASAAK*
Ga0070691_105204462	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	SMGRLILFTISILVLATPVSADGKWVLWMMGGDSPWDSVSAFPTREECAAAMHQQAQALERMGLRVTEDAAGPSFSGTDADRAMRGQCLAENLDPRASAAK*
Ga0070667_1001902823	3300005367	Switchgrass Rhizosphere	MHRLILTTLALLLATASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLIENADPRSSAAK*
Ga0070711_1002356711	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLMLPMLAVLVLASPVSADGGWVLWIMGGDSPWDSVSTFATREECATAMHQQAQALEKMGLRVSEQPGVSFSGADAERSMRGQCLAESVD
Ga0070705_1000850862	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLMLPMLAVLVLASPVSADGGWVLWIMGGDSPWDSVSTFATREECATAMHQQAQALEKMGLRVSEQPGVSFSGADAERSMRGQCLAESVDPRTTAAK*
Ga0070705_1003689111	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLILSTLAVLGLASPTSADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEPGVSFNGADADRTMRGQCLAE
Ga0070694_1014368762	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLILSTLAVVGLASPASADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEAGVSFNGADADRTMRGQCLAESVDPRTSAAK*
Ga0070708_1004524371	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLILSTLAVLGLASPASADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVAEEPGASFNGADADRTMRGQCLAENVDPRTTAAK*
Ga0070706_1017117041	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLILSTLAVVGLASPASADGGWVLWMMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEPGASFNGADADRTMRGQCLAENVDPRTTAAK*
Ga0073909_104432601	3300005526	Surface Soil	MRRLILPTLAVLALASPASADGGWVLWIMGGDSPWDSVSTFATREECAAAMHQQAQALEKMGLRVSEEPGSSFNGADADRTMRG
Ga0070741_100074567	3300005529	Surface Soil	MPRLILTTVALLLAAAAAPALAADGWVLWIQGNDSPWDSVSTFETREECAGALHQQAQAVEKLGLKVTETPGASFSAADTDRAFKGQCLVANADPQATATK*
Ga0070696_1005702832	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLILSTLAVVGLASPASADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEPGASFNGADADRTMRGQCLAESVDPRTAAAK*
Ga0066703_102427742	3300005568	Soil	TLVVLAVASPVSADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEAGVSFNGADADRTMRGQCLAESVDPRTSAAK*
Ga0068851_109728641	3300005834	Corn Rhizosphere	MHRLILTTLALLLATASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLIENADPR
Ga0068860_1001986733	3300005843	Switchgrass Rhizosphere	MGRLILFTISILVLATPVSADGKWVLWMMGGDSPWDSVSAFPTREECAAAMHQQAQALERMGLRVTEDAAGPSFSGTDADRAM
Ga0081539_103517561	3300005985	Tabebuia Heterophylla Rhizosphere	MLRVIPAAVVLLLAAASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKMGLKVTETPGASFSAGDSDRTFKGQCLTENADPRATAAK*
Ga0075024_1005700711	3300006047	Watersheds	MRRLILPTLAVLALAPPVSAEGGWVLWIMGGDSPWDSVSNFATREECSAAMHQQALALEKLGLRISEEAGTSFTGADADRSMRGQCLAESVDPRTTAAK*
Ga0075026_1007674742	3300006057	Watersheds	MRRLIVSTLALLALASPVSADGGWVLWIMGGDSPWDSVSTFATREECAVALHQQAQALEKMGLRVSEEPGVSFNGADADRTMRGQCLAESVDPRTAAAK*
Ga0070712_1001158312	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLMLPMLAVLVLASPVSADGGWVLWIMGGDSPWDSVSTFATREECATAMHQQAQALEKMGLRVSEQPGASFSGADAERSMRGQCLAESVDPRTTAAK*
Ga0079222_101074572	3300006755	Agricultural Soil	MRRLMLPMLAVLVLASPVSADGGWVLWIMGGDSPWDSVSTFATREECATAMHQQAQALEKMGLRISEQPGASFSGADAERSMRGQCLAESVDPRTTAAK*
Ga0079220_104222441	3300006806	Agricultural Soil	MHRLIPTTLVLLLATATPALADGWVLWIQGGDSPWDSVSTFPSREECAGALHQQAQAVEKLGLKVTETPGASFAATDTDRTFKGQCLTENADPRAAAAK*
Ga0075431_1010333232	3300006847	Populus Rhizosphere	MHRLILTTLALLLASASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLIENADPRSSAAK*
Ga0079219_100261492	3300006954	Agricultural Soil	MHRLILTTLALLLASASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLIENADPRTSAAK*
Ga0079219_114881922	3300006954	Agricultural Soil	ALPMHRLIPTTLVLLLATATPALADGWVLWIQGGDSPWDSVSTFPSREECAGALHQQAQAVEKLGLKVTETPGASFAATDTDRTFKGQCLAENADPRASAAK*
Ga0099794_102150133	3300007265	Vadose Zone Soil	MRRLILPTLVVLAVASPVSADGGWMLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVFEEAGVSFNGADADRTMRGQC
Ga0099795_103384872	3300007788	Vadose Zone Soil	MRRLILSTLAVVGLASPASADGGWVLWMMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEPGASFNGADADRTMRGQCLAENVDPRTTA
Ga0099829_100296578	3300009038	Vadose Zone Soil	VSAAGGWVLWMMGGDSPWDSVSTFPTREECAAAMHQQAQALEKMGLRVTEDPGTSFEGADADRTMRGQCLAENIDPRAAAAK*
Ga0114129_102165951	3300009147	Populus Rhizosphere	LDEEDPSMRRLTLLIVTLLSLTASASADGGWVLWMMGGDSPWDSVSTFPTREECATAMRQQGQALEKMGLRVVESPAGASFEAADPDRTMRGQCLAENVDPRRAAAK*
Ga0114129_103147374	3300009147	Populus Rhizosphere	MRRLILLTFAVFVLAAPASADGGWVLWIMGGDSPWDSVSTFPTREACAAAMHQQAQALEKMGLRVTEDPGASFEGADADRTMRGQCLAENLDPRAAAAK*
Ga0105243_105100271	3300009148	Miscanthus Rhizosphere	MGRLILFTISILVLATPVSADGKWVLWMMGGDSPWDSVSAFPTREECAAAMHQQAQALERMGLRVTEDAAGPSFSGTDADRAMRGQCLAENLDPRAS
Ga0075423_104976121	3300009162	Populus Rhizosphere	ASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLIENADPRTSAAK*
Ga0134124_103325031	3300010397	Terrestrial Soil	MGRLILFTISILVLATPVSADGKWVLWMMGGDSPWDSVSAFPTREECAAAMHQQAQALERMGLRVTEDAAGRRGGRPLRFPCRSAIV
Ga0134122_133299002	3300010400	Terrestrial Soil	AVASPVSADGGWVLWIMGGDSPWDSVSVFATREECAAAMHQQAQALEKVGLRVAEDPGGSFSGADGDRAMRGQCLAEGVDPRTTAAK*
Ga0137392_100012645	3300011269	Vadose Zone Soil	MRGLILPTLVVLAVASPVSADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEAGVSFNGADADRTMRGQCLAESVDPRTSAAK*
Ga0137392_115604231	3300011269	Vadose Zone Soil	LLTLALLVLATSVSAAGGWVLWMQGGDSPWDSVSTFPTREACAAAMHQQAQAIEKMGLRVVEDPGTSFEGADADRTMRGQCLAENIDPRAAAAK*
Ga0137391_100198574	3300011270	Vadose Zone Soil	MRRLILPTLVVLAVASPVSADGGWVLWIMGGDSPWDSVSTFATRDECAVAMHQQAQALEKMGLRVSEEAGVSFNGADADRTMRGQCLAESVDPRTSAAK*
Ga0137363_100195093	3300012202	Vadose Zone Soil	MRRLILSTLTVLGLASPTSADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEPGASFNGADADRTMRGQCLAENVDPRTTAVK*
Ga0137399_113611781	3300012203	Vadose Zone Soil	MRRLILPTLVVLAVASPVSADGGWVLWIMGGESPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEAGVSFNGADPDRTMRGQCLAESVDPRTSAAK*
Ga0137362_100432285	3300012205	Vadose Zone Soil	MRRLILSTLAVLGLASPTSADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEPGASFNGADADRTMRGQCLAENVDPRTTAVK*
Ga0137376_112879081	3300012208	Vadose Zone Soil	MRRLIVSTLAVLALASPGSADGGWVLWIMGGDSPWDSVSTFATREECAVALHQQAQALEKMGLRVSEEPGVSFNGADADRTMRGQCLAESVDPRTAAAK*
Ga0137368_104400191	3300012358	Vadose Zone Soil	AILALFVFGTSASADGRWVLWMMGGDSPWDSVSTFPTPEECAAAMHQQAQGLEKMGLRVTETPGTSFNGTDADRTIRGQCLAENIDPRSTAAQ*
Ga0137375_100950814	3300012360	Vadose Zone Soil	MRRLILAILALFVFGTSASADGRWVLWMMGGDSPWDSVSTFPTPEECAAAMHQQAQGLEKMGLRVTETPGTSFNGTDADRTIRGQCLAENIDPRSTAAQ*
Ga0137361_109092363	3300012362	Vadose Zone Soil	MRRLILSTLAVLGLASPTSADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEPGASFNGADADR
Ga0137390_114779951	3300012363	Vadose Zone Soil	MRRLILLTLALLVLATSVSAAGGWVLWMQGGDSPWDSVSTFPTREACAAAMHQQAQAIEKMGLRVVEAPGASFEGADGDRTMRGQCLAENIDPRAAAAK*
Ga0137397_100293804	3300012685	Vadose Zone Soil	MGRLILSTITILVLATPVSADGKWVLWMMGGDSPWDSVSAFPTREECAAAMHQQAQALERMGLRVTEDPAGPSFSGTDADRTMRGQCLAENLDPRASAAK*
Ga0137359_103587741	3300012923	Vadose Zone Soil	MRRLILSTLAVVGLASPASADGGWVLWMMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEPGASFNGADADRTMRGQCLAENVDPRTTAVK*
Ga0137416_103077221	3300012927	Vadose Zone Soil	MRRLILPTLVVLAVASPVSADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVFEEAGVSFNGADADRTMRGQCLAESVDPRTSAAK*
Ga0137404_103898742	3300012929	Vadose Zone Soil	MGRLILSTITILVLATPVSADGKWVLWMMGGDSPWDSVSAFPTREECAAAMHQQAQALERIGLRVTEDPAGPSFSGTDADRTMRGQCLAENLDPRASAAK*
Ga0164298_116928551	3300012955	Soil	HRLILTTPALLLASASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVAETPAASFSAADTDRTFKGQCLIENADPRSSAAK*
Ga0164303_104813952	3300012957	Soil	LLLASASPALADGWVLWIQGGDSPWDSVSTFSTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLIENADPRSSAAK*
Ga0164303_114519701	3300012957	Soil	MRRLILSTLAVLGLASPTSADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGPRVSEEPGASFNGADADRTMRGQCLAENVDPRTTAAK*
Ga0164301_100148251	3300012960	Soil	MESRRTFLMHRLILTTLALLLASASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLIENADPRSSAAK*
Ga0164306_114219671	3300012988	Soil	LASASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLIENADPRSSAAK*
Ga0164305_100740272	3300012989	Soil	MECRRTFLLHRLILTTLALLLASASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLIENADPRSSAAK*
Ga0184609_102665142	3300018076	Groundwater Sediment	MRRLILLTLAVFVLAASASADGGWVLWMMGGDSPWDSVSTFPTREACAAAMHQQAQALEKMGLRVVEDPGTSFEGADADRTMRGQCLAENIDPRAAAAK
Ga0190265_100343672	3300018422	Soil	MRRLILLTLALSVLAIPASADGRWVLWIMGGDSPWDSVSTFPAREECAAAMHQQAQALEKMGLRVVEDPGVSFEATDADRAMRGQCLAEHTDPRPTAAK
Ga0190265_123493701	3300018422	Soil	MRRLTLITLVLLSLTTSASADGGWVLWMMGGDSPWDSVSTFPTREECATAMRQQGQALEKMGLRVVASSAGASFEAADADRTMRGQCLAENLDPRSAAAK
Ga0187894_103326812	3300019360	Microbial Mat On Rocks	MRRLTLLTLALLSLTAPASADGGWVLWMMGGDSPWDSVSTFPTREECATAMRQQGQALEKMGLRVVASPAGASFEAADADRTMRGQCLAENIDPRRAATN
Ga0187892_100043703	3300019458	Bio-Ooze	MRRLTLLTLALLSLTAPASADGGWVLWMMGGDSPWDSVSTFPTREECATAMRQQGQALEKMGLRVVASPAGASFEAADADRTMRGQCLAENVDPRKAATN
Ga0193746_10189762	3300019870	Soil	MRRLIVSTLAVLALASPVSADGGWVLWIMGGDSPWDSVSTFATREECAVALHQQAQALEKMGLRVSEEPGASFNGADADRTMRGQCLAESVDPRTAAAK
Ga0193722_10098613	3300019877	Soil	MRRLIVSTLAVLALASPVSADGGWVLWIMGGDSPWDSVSTFATREECAVALHQQAQALEKMGLRVSEEPGVSFNGADADRTMRGQCLAESVDPRTAAAK
Ga0193723_10323484	3300019879	Soil	MRRLTLVTLAVLALNAPSSAAGGWVLWIMGGDSPWDSVSSFPTREECAAAMHQQAQALEKMGLRVVEDQGASFEATDADRAVRGQCLAENTA
Ga0193713_10628871	3300019882	Soil	MRRLTLVTLAVLALNAPSSAAGGWVLWIMGGDSPWDSVSSFPTREECAAAMHQQAQALEKMGLRVVEDQGVSFEATDADRAVRGQCLAENTAPRPTAA
Ga0193725_10684932	3300019883	Soil	MRRLTLVTLAVLALNAPSSAAGGWVLWIMGGDSPWDSVSSFPTREECAAAMHQQAQALEKMGLRVVEDQGASFEATDADRAVRGQCLAENTAPRPTAAR
Ga0193727_11099412	3300019886	Soil	MRRLTLVTLAVLALNAPSSAAGGWVLWIMGGDSPWDSVSSFPTREECAAAMHQQAQALEKMGLRVVEDPGASFNGIDADRSIRG
Ga0193718_10898342	3300019999	Soil	MRRLILSTLAVLALASPVSADGGWVLWIMGGDSPWDSVSTFATREECAVALHQQAQALEKMGLRVSEEPGASFNGADADRTMRGQCLAESVDPRTAAAK
Ga0193755_10404043	3300020004	Soil	MRRLTLVTLAVLALNAPSSAAGGWVLWIMGGDSPWDSVSSFPTREECAAAMHQQAQALEKMGLRVVEDQGASFEATDADRAVRGQCLAENTAPRPTAAK
Ga0179596_100285853	3300021086	Vadose Zone Soil	MRRLILPTLVVLAVASPVSADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEAGVSFNGADADRTMRGQCLAESVDPRTSAAK
Ga0193719_104610922	3300021344	Soil	MRRLTLVTLAVLALNAPSSAAGGWVLWIMGGDSPWDSVSSFPTREECAAAMHQQAQVLEKMGLRVVEDQGASFEATDADRALRGQCLAENTAPRPTAAK
Ga0210389_108505372	3300021404	Soil	MRRLMLPMLAVLVLASPVSADGGWVLWIMGGDSPWDSVSTFATREECATAMHQQAQALEKMGLRVSEQPGASFSGADAERSMR
Ga0182009_100007058	3300021445	Soil	HRLILTTLALLLATASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAVDTDRTFKGQCLIENADPRTSAAK
Ga0137417_12287981	3300024330	Vadose Zone Soil	SADGGWMLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVFEEAGVSFNGADADRTMRGQCLAESVDPRTSAAK
Ga0207697_101791422	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MHRLILTTLALLLATASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLIENADPRTSAAK
Ga0207642_105689232	3300025899	Miscanthus Rhizosphere	MHRLILTTLALLLATASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLIENAVVR
Ga0207642_107692072	3300025899	Miscanthus Rhizosphere	LFTISILVLATPVSADGKWVLWMMGGDSPWDSVSAFPTREECAAAMHQQAQALERMGLRVTEDAAGPSFSGTDADRAMLGQCLAENLDPRASAAK
Ga0207684_101537113	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLILSTLAVLGLASPASADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVAEEPGASFNGADADRTMRGQCLAENVDPRTTAAK
Ga0207684_102095593	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRRLILSTLAVVGLASPASADGGWVLWMMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEPGASFNGADADRTMRGQCLAENVDPRTTAAK
Ga0207707_107265183	3300025912	Corn Rhizosphere	MGRLILFTISILVLATPVSADGKWVLWMMGGDSPWDSVSAFPTREECAAAMHQQAQALERMGLRVTEDAAGPSFSGTDADRAMRGQCLAENLDPRASAAK
Ga0207694_102855643	3300025924	Corn Rhizosphere	TTLALLLATASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLIENADPRTSAAK
Ga0207709_109770351	3300025935	Miscanthus Rhizosphere	MHRLILTTLALLLANASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAVDTDRTFKG
Ga0207661_113981752	3300025944	Corn Rhizosphere	SPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAVDTDRTFKGQCLIENADPRTSAAK
Ga0207712_109889612	3300025961	Switchgrass Rhizosphere	MGRLILFTISILVLATPVSADGKWVLWMMGGDSPWDSVSAFPTREECAAAMHQQAQALERMGLRVTEDAAGPSFSGTDADRAMLGQCLAENLDPRASAAK
Ga0207708_102470483	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MHRLILTTLALLLATASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLI
Ga0207641_106577632	3300026088	Switchgrass Rhizosphere	MHRLILTTLALLLATASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLIENADPRSSAAK
Ga0209438_10080381	3300026285	Grasslands Soil	MGRLILSTITILVLATPVSADGKWVLWMMGGDSPWDSVSAFPTREECAAAMHQQAQALERMGLRVTEDPAGPSFSGTEADRTMRGQCLAENLDPRASAAK
Ga0209131_10027639	3300026320	Grasslands Soil	MGRLILSTITILVLATPVSADGKWVLWMMGGDSPWDSVSAFPTREECAAAMHQQAQALERIGLRVTEDPAGPSFSGTDADRTMRGQCLAENLDPRASAAK
Ga0257163_10040821	3300026359	Soil	MRRLIVSTLAVLALASPASADGGWVLWIMGGDSPWDSVSTFATREECAVALHQQAQALEKMGLRVSEEPGVSFNGADADRTMRGQCLAESVDPRTAAAK
Ga0257179_10126883	3300026371	Soil	MRRLILSTLAVVGLASPASADGGWVLWMMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEPGASFNGADADRTMRGQC
Ga0257179_10246821	3300026371	Soil	MRRLILPTLVVLAVASPVSADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEAGVSFNGADADRTMRGQCLA
Ga0257172_10033763	3300026482	Soil	MRRLILSTLAVVGLASPASADGGWVLWMMGGDSPWDSVSTFATREECAVALHQQAQALEKMGLRVSEEPGASFNGADADRTMRGQCLAENVDPRTTAAK
Ga0257160_10435471	3300026489	Soil	MRRLILSTLAVVGLASPASADGGWVLWMMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEPGASFNGADADRTMRGQCLAEN
Ga0257157_10011503	3300026496	Soil	MRRLLVSTLAVLALASPASADGGWVLWIMGGDSPWDSVSTFATREECAVALHQQAQALEKMGLRVSEEPGVSFNGADADRTMRGQCLAESVDPRTAAAK
Ga0257161_10016354	3300026508	Soil	MRRLIVSTLAVLALASPASADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEPGVSFNGADADRTMRGQCLAESVDPRTAAAK
Ga0257168_10144712	3300026514	Soil	MRRLILSTLAVLGLASPTSADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEPGASFNGADADRTMRGQCLAENVDPRTTAVK
Ga0209648_108030701	3300026551	Grasslands Soil	MRRLILSTLAVVGLASPASADGGWVLWMMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEKPGASFNGADADRTMRGQCLAENVDPRTTASK
Ga0179587_103657493	3300026557	Vadose Zone Soil	MRRLIVSTLAVLALASPVSADGGWVLWMMGGDSPWDSVSTFPTREECAVALHQQAQALEKMGLRVSEEPGVSFNGADADRTMRGQCLAESVDPRTAAAK
Ga0179587_105201461	3300026557	Vadose Zone Soil	MRRLILSTLAVVGLASPASADGGWVLWMMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEPGASFNGADADRTMRGQCLAENVDPRTTAAT
Ga0209217_10651082	3300027651	Forest Soil	MHRLMLPMLAVLVLASPVSADGGWVLWIMGGDSPWDSVSTFATREECATAMHQQAQALEKMGLRVSEQPGASFSGADAERSMRGQCLAESVDPRTTAAK
Ga0209217_11699681	3300027651	Forest Soil	MRRLLVSTLAVLALASPASADGGWVLWIMGGDSPWDSVSTFATREECAVALHQQVQALEKMGLRVSEEPGVSFNGADADRTMRGQCLAESVDPRTAAAK
Ga0209073_100863461	3300027765	Agricultural Soil	MHRLILTTLALLLASASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLIENADPRTSAAK
Ga0209073_102362442	3300027765	Agricultural Soil	MRRLMLPMLAVLVLASPVSADGGWVLWIMGGDSPWDSVSTLATREECATAMHQQAQALEKMGLRISEQPGASFSGADAERSMRGQCLAESVDPRTTAAK
Ga0209177_103755681	3300027775	Agricultural Soil	MRRLMLPMLAVLVLASPVSADGGWVLWIMGGDSPWDSVSTFATREECATAMHQQAQALEKMGLRISEQPGASFSGADAERSMRGQCLAESVDPRTTAAK
Ga0209074_102756542	3300027787	Agricultural Soil	MRRLMLPMLAVLVLASPVSADGGWVLWIMGGDSPWDSVSTFATREECATAMHQQAQALEKMGLRISEQPGASFSGADAERS
Ga0209068_100063233	3300027894	Watersheds	MRRLILPTLAVLALAPPVSAEGGWVLWIMGGDSPWDSVSNFATREECSAAMHQQALALEKLGLRISEEAGTSFTGADADRSMRGQCLAESVDPRTTAAK
Ga0268265_100500834	3300028380	Switchgrass Rhizosphere	MHRLILTTLALLLATASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAVDTDRTFKGQCLIEN
Ga0137415_103263821	3300028536	Vadose Zone Soil	MRRLILPTLVVLAVASPVSADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVFEEAGVSFNGADADRTMRGQCLAESVDPRTSAAK
Ga0137415_104244273	3300028536	Vadose Zone Soil	MRRLILSTLAVLGLASPTSADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEPGASFNGADADRTM
Ga0307504_100234381	3300028792	Soil	SRSMRRLILPVVAVLVLATSVSADGKWVLWMMGGDSPWDSVSTFATREECAVALHQQAQALEKMGLRVSEEPGVSFNGADADRTMRGQCLAESVDPRTAAAK
Ga0307504_102627952	3300028792	Soil	MRRLTLVTLAVLALNAPSSADGGWVLWIMGGDSPWDSVSRFPTREECAAAMHQQAQALAKMGLRVVEDQGASFEATDADRTMRGQCLAENTAPRPTAAK
Ga0247825_101419541	3300028812	Soil	MHRLILTTLALLLASASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLIENADPRSSAAK
Ga0307469_100030433	3300031720	Hardwood Forest Soil	MRRLMLPMLAVLVLGSPVSADGGWVLWIMGGDSPWDSVSTFATREECATAMHQQAQALEKMGLRVSEQPGVSFSGADAERSMRGQCLAESVDPRTTAAK
Ga0307469_102732071	3300031720	Hardwood Forest Soil	NRTSIPAIPGESITALKIRLRYDWRQEDLPMRRLMLPMLAVLVLASPVSADGGWVLWIMGGDSPWDSVSTFATREECATAMHQQAQALEKMGLRVSEQPGASFSGADAERSMRGQCLAESVDPRTTAAK
Ga0307469_123701001	3300031720	Hardwood Forest Soil	RLTLVTLAVLALNAPSSADGGWVLWIMGGDSPWDSVSRFPTREECAAAMHQQAQVLEKMGLRVVEDQGASFEATDADRAVRGQCLAENTAPRPTAAK
Ga0307468_1001212242	3300031740	Hardwood Forest Soil	MRPLLTLLMTLAMFVSAAPASADGRWVLWMMGGDSPWDSVSTFPTREECATAMHQQAQALEKTGLRVVENAGVSFESTDADRSMRGQCLAENIDPRAAAAK
Ga0307468_1002577702	3300031740	Hardwood Forest Soil	MRRLTLVTLAVLALNAPSSADGGWVLWIMGGDSPWDSVSRFPTREECAAAMHQQAQVLEKMGLRVVEDQGASFEATDADRAVRGQCLAENTAPRPTAAK
Ga0307468_1024328211	3300031740	Hardwood Forest Soil	MRRLILSTLAVLGLTSPASADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLRVSEEPGASFNGADADRTMRGQCLAENVDPRTTAAK
Ga0307470_101546894	3300032174	Hardwood Forest Soil	MRPLLTLLMTLAMFVSAAPASADGRWVLWMMGGDSPWDSVSTFPTREECATAMHQQAQALEKTGLRVVEHAGVSFEGTDADRSMRGQCLAENIDPRAAAAK
Ga0307471_1001388751	3300032180	Hardwood Forest Soil	MTLAMFVSATPASADGRWVLWMMGGDSPWDSVSTFPTREECATAMHQQAQALEKTGLRVVENAGVSFEGTDADRSMRGQCLAENIDPRAAAAK
Ga0307471_1002663042	3300032180	Hardwood Forest Soil	MRRLTLVTLAVLALNAPSSADGRWVLWIMGGDSPWDSVSNFPTREECAAAMHQQAQVLEKMGLRVVEDQGASFEATDADRAVRGQCLAENTAPRPTAAK
Ga0307471_1003199542	3300032180	Hardwood Forest Soil	MRRLMLPMLVVLVLASPVSADGGWVLWIMGGDSPWDSVSTFATREECATAMHQQAQALEKMGLRVSEQPGASFSGADAERSMRGQCLAESVDPRTTAAK
Ga0307472_1000072724	3300032205	Hardwood Forest Soil	MRRLILSTLAVLGLASPASADGGWVLWIMGGDSPWDSVSTFATREECAVAMHQQAQALEKMGLQVAEEPGASFNGADADRTMRGQCLAENVDPRTTAAK
Ga0307472_1007132052	3300032205	Hardwood Forest Soil	MRRLMLPMLAVLVLASPVSADGGWVLWIMGGDSPWDSVSTFATREECATAMHQQAQALEKMGLRVSEQPGVSFSGTDAERSMRGQCLAESVDPRTTAAK
Ga0247830_116787301	3300033551	Soil	LILTTLALLLATASPALADGWVLWIQGGDSPWDSVSTFPTREECAGALHQQAQAVEKLGLKVTETPAASFSAADTDRTFKGQCLIENADPRSSAAK
Ga0373948_0113432_29_328	3300034817	Rhizosphere Soil	MRRLILPTLLVLAVASPVSADGGWVLWIMGGDSPWDSVSVFATREECAAAMHQQAQALEKVGLRVAEDPGGSFSGADGDRAMRGQCLAEGVDPRTTAAM

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F057575

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences