Metagenome / Metatranscriptome Family F057715

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F057715
Family Type	Metagenome / Metatranscriptome
Number of Sequences	136
Average Sequence Length	76 residues
Representative Sequence	PVDYYDFSVVNPLVPTSLGKERSEAIEFLLPKNLAQKFANNEITNQELIDKSQVLVNGVRIALNLQLVE
Number of Associated Samples	106
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	7.41 %
% of genes near scaffold ends (potentially truncated)	88.24 %
% of genes from short scaffolds (< 2000 bps)	91.91 %
Associated GOLD sequencing projects	99
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.52

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (57.353 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (33.824 % of family members)
Environment Ontology (ENVO)	Unclassified (30.882 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (69.118 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.46% β-sheet: 27.84% Coil/Unstructured: 56.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.52
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.52
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF00076	RRM_1	5.15
PF00892	EamA	4.41
PF13602	ADH_zinc_N_2	2.21
PF13517	FG-GAP_3	2.21
PF00080	Sod_Cu	1.47
PF00596	Aldolase_II	1.47
PF04173	DoxD	1.47
PF07593	UnbV_ASPIC	1.47
PF13685	Fe-ADH_2	1.47
PF13411	MerR_1	1.47
PF07024	ImpE	0.74
PF03479	PCC	0.74
PF00034	Cytochrom_C	0.74
PF00486	Trans_reg_C	0.74
PF10509	GalKase_gal_bdg	0.74
PF00557	Peptidase_M24	0.74
PF00837	T4_deiodinase	0.74
PF01909	NTP_transf_2	0.74
PF14106	DUF4279	0.74
PF01590	GAF	0.74
PF03916	NrfD	0.74
PF07947	YhhN	0.74
PF03358	FMN_red	0.74
PF07642	BBP2	0.74
PF04973	NMN_transporter	0.74
PF04545	Sigma70_r4	0.74
PF13185	GAF_2	0.74
PF00924	MS_channel	0.74
PF00459	Inositol_P	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	1.47
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	1.47
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	0.74
COG1661	Predicted DNA-binding protein with PD1-like DNA-binding motif, PPC/DUF296 domain	General function prediction only [R]	0.74
COG3201	Nicotinamide riboside transporter PnuC	Coenzyme transport and metabolism [H]	0.74
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	0.74
COG3714	Uncharacterized membrane protein YhhN	Function unknown [S]	0.74
COG4455	Protein of avirulence locus involved in temperature-dependent protein secretion	General function prediction only [R]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.35 %
All Organisms	root	All Organisms	42.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.35 %
cellular organisms	root	All Organisms → cellular organisms	42.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.35 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	42.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.35 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	16.18 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.74 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.35 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	8.09 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.94 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.74 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.88 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.94 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	1.47 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.74 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.74 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.88 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.94 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	1.47 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.74 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.74 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.88 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	1.47 %
Occallatibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter	0.74 %
Granulicella	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella	0.74 %
Acidocella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella	0.74 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.74 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.88 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	1.47 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.74 %
Acidocella facilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → Acidocella facilis	0.74 %
unclassified Granulicella	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella	0.74 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.74 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	57.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	5.88 %
Acidobacteria bacterium AB60	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	1.47 %
Granulicella sp. L46	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	0.74 %
Occallatibacter riparius	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	0.74 %
Acidocella facilis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → Acidocella facilis	0.74 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.74 %
Acidobacteria bacterium 13_1_40CM_2_60_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZTSFBX01BWCVT	Not Available	511	Open in IMG/M
3300001867\|JGI12627J18819_10361084	Not Available	588	Open in IMG/M
3300004119\|Ga0058887_1262568	Not Available	597	Open in IMG/M
3300004140\|Ga0058894_1414709	Not Available	509	Open in IMG/M
3300004633\|Ga0066395_10789270	Not Available	569	Open in IMG/M
3300005332\|Ga0066388_104355237	Not Available	721	Open in IMG/M
3300005332\|Ga0066388_107869374	Not Available	533	Open in IMG/M
3300005439\|Ga0070711_100207683	All Organisms → cellular organisms → Bacteria	1515	Open in IMG/M
3300005764\|Ga0066903_101457542	All Organisms → cellular organisms → Bacteria	1290	Open in IMG/M
3300005764\|Ga0066903_102334839	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Occallatibacter → Occallatibacter riparius	1034	Open in IMG/M
3300006086\|Ga0075019_10407363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	833	Open in IMG/M
3300006163\|Ga0070715_10237921	All Organisms → cellular organisms → Bacteria → Acidobacteria	945	Open in IMG/M
3300006174\|Ga0075014_101012520	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Granulicella → unclassified Granulicella → Granulicella sp. L46	504	Open in IMG/M
3300006358\|Ga0068871_100915205	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300006642\|Ga0075521_10402220	Not Available	666	Open in IMG/M
3300009521\|Ga0116222_1241742	Not Available	779	Open in IMG/M
3300009524\|Ga0116225_1392342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300009792\|Ga0126374_10342640	Not Available	1021	Open in IMG/M
3300010048\|Ga0126373_10679747	All Organisms → cellular organisms → Bacteria	1086	Open in IMG/M
3300010048\|Ga0126373_11716075	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300010376\|Ga0126381_100422786	All Organisms → cellular organisms → Bacteria	1862	Open in IMG/M
3300012359\|Ga0137385_11255306	Not Available	603	Open in IMG/M
3300012984\|Ga0164309_10777733	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300014153\|Ga0181527_1066840	All Organisms → cellular organisms → Bacteria → Acidobacteria	1829	Open in IMG/M
3300016270\|Ga0182036_10318188	Not Available	1189	Open in IMG/M
3300016294\|Ga0182041_10605867	Not Available	963	Open in IMG/M
3300016319\|Ga0182033_10668637	Not Available	907	Open in IMG/M
3300016319\|Ga0182033_11738572	Not Available	565	Open in IMG/M
3300016357\|Ga0182032_10927725	Not Available	741	Open in IMG/M
3300016371\|Ga0182034_11152770	Not Available	673	Open in IMG/M
3300016371\|Ga0182034_11587167	Not Available	574	Open in IMG/M
3300016404\|Ga0182037_10090425	All Organisms → cellular organisms → Bacteria	2176	Open in IMG/M
3300016404\|Ga0182037_11309122	Not Available	639	Open in IMG/M
3300016445\|Ga0182038_10362565	All Organisms → cellular organisms → Bacteria	1204	Open in IMG/M
3300016445\|Ga0182038_10926352	Not Available	769	Open in IMG/M
3300017934\|Ga0187803_10019305	All Organisms → cellular organisms → Bacteria	2720	Open in IMG/M
3300017966\|Ga0187776_10043550	All Organisms → cellular organisms → Bacteria → Acidobacteria	2535	Open in IMG/M
3300017972\|Ga0187781_10088372	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2144	Open in IMG/M
3300017972\|Ga0187781_10204908	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1392	Open in IMG/M
3300017972\|Ga0187781_10294374	All Organisms → cellular organisms → Bacteria → Acidobacteria	1151	Open in IMG/M
3300017972\|Ga0187781_11038519	Not Available	600	Open in IMG/M
3300017973\|Ga0187780_10782439	Not Available	690	Open in IMG/M
3300017974\|Ga0187777_11170277	Not Available	561	Open in IMG/M
3300017995\|Ga0187816_10037327	All Organisms → cellular organisms → Bacteria → Acidobacteria	1995	Open in IMG/M
3300017999\|Ga0187767_10087958	Not Available	843	Open in IMG/M
3300017999\|Ga0187767_10323509	Not Available	534	Open in IMG/M
3300018013\|Ga0187873_1252268	Not Available	652	Open in IMG/M
3300018035\|Ga0187875_10148843	All Organisms → cellular organisms → Bacteria → Acidobacteria	1310	Open in IMG/M
3300018043\|Ga0187887_10862613	Not Available	536	Open in IMG/M
3300018062\|Ga0187784_10005809	All Organisms → cellular organisms → Bacteria	9958	Open in IMG/M
3300018085\|Ga0187772_10656076	All Organisms → cellular organisms → Bacteria	750	Open in IMG/M
3300018086\|Ga0187769_10710224	Not Available	760	Open in IMG/M
3300018088\|Ga0187771_11902797	Not Available	505	Open in IMG/M
3300018090\|Ga0187770_10239465	Not Available	1405	Open in IMG/M
3300018090\|Ga0187770_10485502	Not Available	976	Open in IMG/M
3300018090\|Ga0187770_11360478	Not Available	576	Open in IMG/M
3300019788\|Ga0182028_1171574	Not Available	507	Open in IMG/M
3300019788\|Ga0182028_1278644	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1165	Open in IMG/M
3300020579\|Ga0210407_10262284	All Organisms → cellular organisms → Bacteria	1347	Open in IMG/M
3300020580\|Ga0210403_11257146	Not Available	567	Open in IMG/M
3300020581\|Ga0210399_10772542	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300020583\|Ga0210401_10276109	All Organisms → cellular organisms → Bacteria	1540	Open in IMG/M
3300021168\|Ga0210406_10406229	All Organisms → cellular organisms → Bacteria	1090	Open in IMG/M
3300021168\|Ga0210406_10466794	Not Available	1002	Open in IMG/M
3300021171\|Ga0210405_11135274	Not Available	582	Open in IMG/M
3300021178\|Ga0210408_11140542	Not Available	598	Open in IMG/M
3300021181\|Ga0210388_10785572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	826	Open in IMG/M
3300021403\|Ga0210397_11367100	Not Available	550	Open in IMG/M
3300021405\|Ga0210387_10185578	Not Available	1798	Open in IMG/M
3300021405\|Ga0210387_10818785	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium AB60	822	Open in IMG/M
3300021405\|Ga0210387_11373469	Not Available	608	Open in IMG/M
3300021406\|Ga0210386_10354957	All Organisms → cellular organisms → Bacteria	1261	Open in IMG/M
3300021420\|Ga0210394_10087121	All Organisms → cellular organisms → Bacteria	2697	Open in IMG/M
3300021420\|Ga0210394_11737932	Not Available	521	Open in IMG/M
3300021475\|Ga0210392_11021658	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300021477\|Ga0210398_10005207	All Organisms → cellular organisms → Bacteria	12100	Open in IMG/M
3300021559\|Ga0210409_10496864	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1083	Open in IMG/M
3300021560\|Ga0126371_11571143	Not Available	785	Open in IMG/M
3300021560\|Ga0126371_12090153	Not Available	682	Open in IMG/M
3300022532\|Ga0242655_10086952	All Organisms → cellular organisms → Bacteria	838	Open in IMG/M
3300022533\|Ga0242662_10073899	All Organisms → cellular organisms → Bacteria	928	Open in IMG/M
3300022717\|Ga0242661_1039953	Not Available	842	Open in IMG/M
3300022724\|Ga0242665_10101473	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300025898\|Ga0207692_10628832	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300025915\|Ga0207693_10100625	Not Available	2266	Open in IMG/M
3300025939\|Ga0207665_10422906	All Organisms → cellular organisms → Bacteria → Acidobacteria	1018	Open in IMG/M
3300026333\|Ga0209158_1155959	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300026334\|Ga0209377_1156132	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300026819\|Ga0207765_117695	Not Available	556	Open in IMG/M
3300026909\|Ga0207858_1019467	Not Available	653	Open in IMG/M
3300026910\|Ga0207840_1033127	Not Available	501	Open in IMG/M
3300026934\|Ga0207816_1045700	Not Available	509	Open in IMG/M
3300027000\|Ga0207803_1007121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1669	Open in IMG/M
3300027063\|Ga0207762_1056985	Not Available	569	Open in IMG/M
3300027376\|Ga0209004_1030719	Not Available	879	Open in IMG/M
3300027629\|Ga0209422_1062666	Not Available	882	Open in IMG/M
3300027667\|Ga0209009_1064456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidocella → Acidocella facilis	920	Open in IMG/M
3300027874\|Ga0209465_10545453	Not Available	577	Open in IMG/M
3300027911\|Ga0209698_11001194	Not Available	623	Open in IMG/M
3300030730\|Ga0307482_1017380	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300031122\|Ga0170822_11557392	All Organisms → cellular organisms → Bacteria	542	Open in IMG/M
3300031564\|Ga0318573_10511017	Not Available	647	Open in IMG/M
3300031573\|Ga0310915_10158552	Not Available	1568	Open in IMG/M
3300031573\|Ga0310915_10519636	Not Available	845	Open in IMG/M
3300031573\|Ga0310915_10978145	Not Available	591	Open in IMG/M
3300031679\|Ga0318561_10233950	Not Available	1000	Open in IMG/M
3300031719\|Ga0306917_10112215	Not Available	1973	Open in IMG/M
3300031720\|Ga0307469_11608583	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300031744\|Ga0306918_10628518	Not Available	841	Open in IMG/M
3300031795\|Ga0318557_10390358	Not Available	640	Open in IMG/M
3300031819\|Ga0318568_10799400	Not Available	585	Open in IMG/M
3300031833\|Ga0310917_10124467	All Organisms → cellular organisms → Bacteria	1682	Open in IMG/M
3300031833\|Ga0310917_10849042	Not Available	615	Open in IMG/M
3300031910\|Ga0306923_10383788	All Organisms → cellular organisms → Bacteria	1600	Open in IMG/M
3300031912\|Ga0306921_12001593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300031912\|Ga0306921_12052364	Not Available	607	Open in IMG/M
3300031942\|Ga0310916_10068815	All Organisms → cellular organisms → Bacteria	2763	Open in IMG/M
3300031942\|Ga0310916_10740324	Not Available	830	Open in IMG/M
3300031946\|Ga0310910_10516233	Not Available	948	Open in IMG/M
3300031946\|Ga0310910_11169497	Not Available	597	Open in IMG/M
3300031947\|Ga0310909_10298621	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300031947\|Ga0310909_10580613	Not Available	937	Open in IMG/M
3300031954\|Ga0306926_10661275	All Organisms → cellular organisms → Bacteria	1270	Open in IMG/M
3300032001\|Ga0306922_10743670	Not Available	1029	Open in IMG/M
3300032039\|Ga0318559_10268740	Not Available	790	Open in IMG/M
3300032044\|Ga0318558_10656815	Not Available	524	Open in IMG/M
3300032055\|Ga0318575_10523496	Not Available	602	Open in IMG/M
3300032059\|Ga0318533_10187474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_2_60_7	1477	Open in IMG/M
3300032076\|Ga0306924_10900246	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300032076\|Ga0306924_11988343	Not Available	600	Open in IMG/M
3300032160\|Ga0311301_10228164	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3121	Open in IMG/M
3300032174\|Ga0307470_10341868	All Organisms → cellular organisms → Bacteria	1034	Open in IMG/M
3300033289\|Ga0310914_11072093	Not Available	706	Open in IMG/M
3300033289\|Ga0310914_11665147	Not Available	542	Open in IMG/M
3300033289\|Ga0310914_11768396	Not Available	522	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.26%
Host-Associated	Host-Associated	0.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.65%
Aquatic	Environmental → Aquatic	6.62%
Plants	Host-Associated → Plants	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	92.65%
Freshwater	Environmental → Aquatic → Freshwater	4.41%
Sediment	Environmental → Aquatic → Sediment	2.21%
Roots	Host-Associated → Plants → Roots	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.50%
Loam	Environmental → Terrestrial → Soil → Loam	16.91%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.24%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.21%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	51.47%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	13.24%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.76%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.68%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.94%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.21%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.47%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.47%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.47%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	33.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.71%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	11.76%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.82%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.41%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.41%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.21%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.21%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.21%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.21%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.47%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	1.47%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.74%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.74%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300004119	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF210 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004140	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF224 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300014153	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_60_metaG	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017934	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_3	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018013	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_100	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022533	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022717	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-11-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026819	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 59 (SPAdes)	Environmental	Open in IMG/M
3300026909	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 23 (SPAdes)	Environmental	Open in IMG/M
3300026910	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 65 (SPAdes)	Environmental	Open in IMG/M
3300026934	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 10 (SPAdes)	Environmental	Open in IMG/M
3300027000	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 41 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027376	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027629	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_05830630	2170459024	Grass Soil	SVVNPLLSSSGGKERSEAIEFLLPRILAQKFAKSEITNQELLDKGQVLVNGVRIALNLQMAE
JGI12627J18819_103610843	3300001867	Forest Soil	LFVAPKMKDVLDLIPGELPVDYYDFSVVNTLNSNTGAKERSEAIEFLLPRDLARKFTNSDITNQELLDKGQVLINGVRIALNLQAAE*
Ga0058887_12625682	3300004119	Forest Soil	VVNSLNSASGGKDRSEGIEFLLPHTLGWKFANAEITNQELLDKGQVLVNGVRIALYLQAAE*
Ga0058894_14147092	3300004140	Forest Soil	LQAVDCFFVAPKMKDVLDLIPSDLPVDYYDFSVVNTLNSTSSGKERSEAIEFLLPRNLARKFTNSDITNQELLDKGQVLVNGVRIALNLQAAE*
Ga0066395_107892702	3300004633	Tropical Forest Soil	IPGELPFDYYDFSVINPLLSNSGGKERSEATEFLLPRTLAQKFVNLEITNQELLDKGQVLVNGVRIALNLQMAE*
Ga0066388_1043552371	3300005332	Tropical Forest Soil	DRIPSDVPVDYYDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQEFVNNEITNQELIDKSQVLVNGVRIALTLQLVE*
Ga0066388_1078693741	3300005332	Tropical Forest Soil	LDRIPSDVPVDYYDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLVE*
Ga0070711_1002076831	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VPDDARIDFYNFPVVSALPFASNGKERSEALEYLCPKHQARKFANSEITNQELIDKSQVLVNGVRIALDLQLVEQLRSAWWLRESV*
Ga0066903_1014575422	3300005764	Tropical Forest Soil	KRAAQTFDLFVAPKMKDVLDRIPSDVPVDYYDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLVE*
Ga0066903_1023348391	3300005764	Tropical Forest Soil	VNPLTPTPGGKERSEAIEFLLPVNLAQRFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0075019_104073631	3300006086	Watersheds	FDLFVAPKVKDVLDQIPGDVPVDYYDFSVINTLKPGSSGKASSEAIEFLLPRIPAQKFANSEITNQELLDKGQILVNGVRIALNLQMAE*
Ga0070715_102379212	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MKDILDQVPDDARIDFYNFPVVSALPFASNGKERSEALEYLCPKHQARKFANSEITNQELIDKSQLLVNGVRIALDLQLVEQLRSAWWLRESV*
Ga0075014_1010125202	3300006174	Watersheds	DILGAAPENANFDVYDFSVVNLFAALPGGKERSEAVEFILPKGLARKFVDSDITNQELIDHSQVLVNGVRIALNLQLVE*
Ga0068871_1009152051	3300006358	Miscanthus Rhizosphere	FWPKMKDILDQVPDDARIDFYNFPVVSALPFASNGKERSEALEYLCPKHQARKFANSEITNQELIDKSQVLVNGVRIALDLQLVEQLRSAWWLRESA*
Ga0075521_104022201	3300006642	Arctic Peat Soil	FLAPKMKDILAKVPNDANFDVYDFSVVNLFAAAPGAKERSEAVEFVFPRILARQFADSEITNQALIDKGQVLVNGVRIALNLQLVE*
Ga0116222_12417421	3300009521	Peatlands Soil	AIALYDFSVVNLLTSSMGAKERSEAVEFILPAALARQFADNEITNQALIDKSQVLLNGVCIALNLQLVE*
Ga0116225_13923421	3300009524	Peatlands Soil	KDILDKVPDDSAVELYDFSVVNPLTTEFSSREHSEAIEFIVPANLARQFVNNDITNQALIDKSQVLVNGVRIALNLQLVE*
Ga0126374_103426403	3300009792	Tropical Forest Soil	YDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQEFVNNEITNQELIDKSQVLVNGVRIALTLQLVE*
Ga0126373_106797473	3300010048	Tropical Forest Soil	QTFDLFVAPKMKDVLDRIPSDLPLDYYDFSVVNPLTPTAGGKERSEAIEFLFPEKLAQRFANSEITNQELIDKSQVLVNGVRIALNLQLVE*
Ga0126373_117160752	3300010048	Tropical Forest Soil	QTFDLFVAPKMKDVLDRIPSDLPLDYYDFSVVNPLTPTPGGKERSEAIEFLLPVNLAQRFANSEITNQELIDKSQVLVNGVRIALNLQLVE*
Ga0126381_1004227861	3300010376	Tropical Forest Soil	IPSDVPVDYYDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLVE*
Ga0137385_112553062	3300012359	Vadose Zone Soil	YYDFSVVAVLFKKKGGKERSEAIEFLLPRNLARKFANSDITNQELLDKGQVLVNGVRIALNLQAAE*
Ga0164309_107777331	3300012984	Soil	NFPVVSALPFASHGKERSEALEYLCPKHQARKFANSEITNQELIDKSQVLVNGVRIALDLQLVEQLRSAWWLRESV*
Ga0181527_10668401	3300014153	Bog	TDNAIDVYDFSVVNPLTSSMGAKERSEAVEFILPAILARQFADNEITNQALIDKSQVLVNGVRIALNLQLVE*
Ga0182036_103181881	3300016270	Soil	VPVDYYDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0182041_106058671	3300016294	Soil	MDVFDFSIVNALASIGKGRSEAIEFVIPKGVARQFAAAEITNQQLIDKSVVLVNGVRIALNLQVVE
Ga0182033_106686372	3300016319	Soil	DVPVDYFDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0182033_117385721	3300016319	Soil	TFDLFVAPRMKDVLDHVPNDVPVDYYDFSVVNPLSPTSTGKERSEAIEFLLPKTLAQKFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0182032_109277252	3300016357	Soil	VDYYDFSVVNSLASGTTSKDRSEAIEFLFPRTLAQKFANTEITNQELIDKGQVLVNGVRIALNLQLVE
Ga0182034_111527702	3300016371	Soil	DFSVVNALVSSSGGKERSEAIEFLLPKALAVKFANAEITNQELLDKSQVLVNGVRIALNLQLAE
Ga0182034_115871672	3300016371	Soil	KMKDVLDRIPSDLPVDYYVFSVVNPLSPTSLGKERSEAIEFLFPKTLAQRFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0182037_100904251	3300016404	Soil	KRAAQTFDLFVAPKMKDVLDRIPSDLPVDYYVFSVVNPLSPTSLGKERSEAIEFLFPKTLAQRFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0182037_113091221	3300016404	Soil	YVFSVVNPLSPTSLGKERSEAIEFLFPKTLAQRFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0182038_103625652	3300016445	Soil	FDLFVAPKMKDVLDRIPSDVPVDYYDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0182038_109263521	3300016445	Soil	APKMKDVLDRIPGDVPVDYYDFSVVNPLSPTSVGKERSEAIEFLLPKKLAQSFANNEVTNQELIDKGLVLVNGVRIALSLQLVE
Ga0187803_100193051	3300017934	Freshwater Sediment	PKMKDVLDRVPSDVPVDYYDFSVVNSLGSSATGKERSEAIEYLLPRNLAQKFANSEITNQELLDKGQVLVNGVRIALNLQMAE
Ga0187776_100435501	3300017966	Tropical Peatland	MKDLLDLVPNDLPLDYYDFSVVNPLSTGPTGKERSEAIEFLFPRNLAQKFANAEITNQELIDKSQVLINGVRIALNLQLVE
Ga0187781_100883723	3300017972	Tropical Peatland	SVVNPLAPTSLGKERSEAIEFLFPKNLAQKFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0187781_102049081	3300017972	Tropical Peatland	PVDYYDFSVVNPLVPTSLGKERSEAIEFLLPKNLAQKFANNEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0187781_102943743	3300017972	Tropical Peatland	PVDYYDFSVVNPLVPTSLGKERSEAIEFLLPKNLAQKFANNQITNQELIDKSQVLVNGVRIALNLQLVE
Ga0187781_110385192	3300017972	Tropical Peatland	VDYYDFSVVNPLTPSSSSYKERSEAIEFLLPKALAQKFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0187780_107824392	3300017973	Tropical Peatland	FVAPKMKDILDRVPNDLPVDYYDFSVVNLLSPDSVGKERSEAIEFLLPKTLAQKFANSEITNQELIDKGQVLVNGVRIALNLQLVE
Ga0187777_111702772	3300017974	Tropical Peatland	VDYYDFSVVNPLSATSTGKERSEAIEFLLPKNLAHKFANSEITNQDLIDKSQVLVNGVRIALNLQLVE
Ga0187816_100373273	3300017995	Freshwater Sediment	RAAQTFDLFVAPKMKDILDRVPSDVPVDYYDFSVVNPLSAASLGKERSEAIEFLLPKRLAQRFANTEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0187767_100879581	3300017999	Tropical Peatland	PSDLTVDYYDFSVVNALSSSATSKERSEAIEFLFPRALAQKFGNTEITNQELIDKGQVLVNGVRIALNLQLVE
Ga0187767_103235092	3300017999	Tropical Peatland	YYDFSVVNPLGTTSMGKDRSEAIEFLLPRSQAQKFANSEITNQELIDKGQVLVNGVRIALNLQLVE
Ga0187873_12522683	3300018013	Peatland	IEIYDFSVVNPLTSGMGTRERAEAIEFIVPANLTRQFVNNEITNQALIDKSQVLVNGVRIALNLQLVE
Ga0187875_101488431	3300018035	Peatland	VVTAPSAEALMKDILDKIPDDNAIETYDFSVVNPLTSGMSTRERSEAIEFIVPANLTRQFANNEITNQALIDKSQVLVNGVRIALNLQLVE
Ga0187887_108626132	3300018043	Peatland	DKIPDDNAIEIYDFSVVNPLTSGMGTRERAEAIEFIVPANLTRQFVNNEITNQALIDKSQVLVNGVRIALNLQLVE
Ga0187784_100058091	3300018062	Tropical Peatland	SVVNPLVPTSLGKERSEAIEFLLPKNLAQKFANNQITNQELIDKSQVLVNGVRIALNLQLVE
Ga0187772_106560761	3300018085	Tropical Peatland	DVLDLVPGDVPADYYDFSVVNPLTSNSLGKERSEAIEFLFPKGLAQKFANAEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0187769_107102242	3300018086	Tropical Peatland	DVPVDYYDFSVVNPLTPSSSSYKERSEAIEFLLPKALAQKFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0187771_119027971	3300018088	Tropical Peatland	FDLFVAPRMKDILDRVPNDLPADYFDFSVVNPLTVTSLGKERSEAIEYLFPKNLAQKFANAEITNQELIDKGQVLVNGVRIALNLQLVE
Ga0187770_102394651	3300018090	Tropical Peatland	PSDVPVDYYDFSVVNALSPASGGKERSEAIEFLLPKTLAQKFANSEITNQELIDKGQVLVNGVRIALNLQLVE
Ga0187770_104855021	3300018090	Tropical Peatland	IPSDVPVDYYDFSVVNPLVPTSLGKERSEAIEFLLPKNSAQKFANNEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0187770_113604781	3300018090	Tropical Peatland	RVPSDAPVDYYDFSVVNLLGATSQSKERSEAIEFLLPRKLAQKFANAEITNQELIDRSQVLVNGVRIALNLELVE
Ga0182028_11715741	3300019788	Fen	GARRYDDNAIAVYDFSVINPLTSGMSTKERSEAIEFILPATLARQFVNNEITNQALIDKGQVLVNGVRIALNLQLVE
Ga0182028_12786442	3300019788	Fen	VPDDNAIAVYDFSVINPLTSGMSTKERSEAIEFILPATLARQFVNNEITNQALIDKGQVLVNGVRIALNLQLVE
Ga0210407_102622844	3300020579	Soil	VVNSLNSASGGKDRSEGIEFLLPHTLGWKFANAEITNQELLDKGQVLVNGVRIALYLQAA
Ga0210403_112571462	3300020580	Soil	VDYYDFWVVNPLLSSSGGKERSEAIEFLVPRILAQKFAKSEITNQELLDKGQVLVNGVRIALNLQMAE
Ga0210399_107725422	3300020581	Soil	DDAPIDFYNLSVVNALPFTSNGKERSEALEYLCPKNVARQFVNSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0210401_102761092	3300020583	Soil	VPDDARIDFYNFPVVSALPFASNGKERSEALEYLCPKRQARKFANSEITNQELIDKSQVLVNGVRIALDLQLVEQLRSAWWLRESV
Ga0210406_104062292	3300021168	Soil	VVSALPFASNGKERSEALEYLCPKHQARKFANSEITNQELIDKSQVLVNGVRIALDLQLVEQLRSAWWLRESV
Ga0210406_104667942	3300021168	Soil	FDLFVAPKMKDVLDAVPSDLPVDYYDFSVVNPLLSSSGGKERSEAIEFLLPRILAQKFAKSEITNQELLDKGQVLVNGVRIALNLQMAE
Ga0210405_111352742	3300021171	Soil	DFSVVNPLLSSSGGKERSEAIEFLLPRILAQKFAKSEITNQEVLDKGQVLVNGVRIALNLQMAE
Ga0210408_111405422	3300021178	Soil	VPDDARIDFYNFPVVSALPFASNGKERSEALEYLCPKHQARKFANSEITNQELIDKSQALVNGVRIALDLQLVEQLRRAWWLRESV
Ga0210388_107855722	3300021181	Soil	PDEPAAELYVFSIVNPLTVPGSKERSEAVDFVIPKKLAHQFANSEITNQQLIDKSQVLVNGVRIALTMQLVE
Ga0210397_113671001	3300021403	Soil	VPDDARIDFYNFPVVSALPFASNGKERSEALEYLCPKHQARKFANSEITNQELIDKSQVLVNGVRIALDLQLVEQLRSA
Ga0210387_101855781	3300021405	Soil	DYYDFSVVNPLLSTSGGKERSEAIEFLLPSILAQKFAKSEITNQELLDKGQVLVNGVRIALNLQMAE
Ga0210387_108187852	3300021405	Soil	DKAPDEPAAELYVFSIVNPLTVPGSKERSEAVDFVIPKKLAHQFANSEITNQQLIDKSQVLVNGVRIALTMQLVE
Ga0210387_113734691	3300021405	Soil	ALTFDLFVAPKMKDVLDAIPSDPPVDYYDFSVVNPLLSSSGGKEGSEAIEFLLPRILAEKFAKTEITNQELLDKGQILVNGVRIALNLQMAE
Ga0210386_103549572	3300021406	Soil	VPDDARIDFYNFPVVSALPFASHGKERSEALEYLCPKHQARKFANSEITNQELIDKSQVLVNGVRIALDLQLVEQLRSAWWLRESV
Ga0210394_1000170924	3300021420	Soil	DPDKTSLYKRAALTFDLFVAPKMKDVLDAVPSDLPVDYYDFSVVNPLLSSSGGKERSEAIEFLLPRILAQKFAKSEITNQELLDKGQVLVNGVRIALNLQMAE
Ga0210394_100871212	3300021420	Soil	VPDDARIDFYNFPVVSALPFASHGKERSEALEYLCPKHQARKFANSEITNQELIDKSQALVNGVRIALDLQLVEQLRSAWWLRESV
Ga0210394_117379321	3300021420	Soil	TLDLFVAPKMKDVLDAVPSDLPVDYYDFSVVNPLLSTSGGKERSEAIEFLLPSILAQKFAKSEITNQELLDKGQVLVNGVRIALNLQMAE
Ga0210392_110216582	3300021475	Soil	ERHLDQVPDDARIDFYNFPVVSALPFASNGKERSEALEYLCPKHQARKFANSEITNQELIDKSQVLVNGVRIALDLQLVEQLRSAWWLRESV
Ga0210398_100052075	3300021477	Soil	VVNSLNSASGGKDRSEGIEFLLPHTLGWTFANAEITNQELLDKGQVLVNGVRIALYLQAA
Ga0210409_104968641	3300021559	Soil	APKMKDILDMLPEDAPIDFYNFSVVNPLPSAYNGKKRSEAIEYLCPMNLSRQFANSEITNQALIDRCQVLVNGVRIALNLQLVE
Ga0126371_115711431	3300021560	Tropical Forest Soil	DFSVVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0126371_120901533	3300021560	Tropical Forest Soil	KDVLDRIPSDVPVDYYDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0242655_100869523	3300022532	Soil	FVAPKMKDVLDLIPSDLPVDYYDFSVVNTLNSNAGGKERSEAIEFLLPRDLARKFTNSDITNQELLGKGQVLINRVRIALNLQAAE
Ga0242662_100738994	3300022533	Soil	DFSVVNTLNSNTGGKERSEAIEFLLPRDLARKFTNSDITNQELLDKGQVLINGVRIALNLQAAE
Ga0242661_10399531	3300022717	Soil	VTNTLTPSSGGKDHSEAIEFPLPWNLARKFANAGITNQELLDKGQGLVNGVRIALNLQAA
Ga0242665_101014731	3300022724	Soil	NSLNSASGGKDRSEGIEFLLPHTLGWKFANAEITNQELLDKGQVLVNGVRIALYLQAAE
Ga0207692_106288321	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MKDILDQVPDDARIDFYNFPVVSALPFASNGKERSEALEYLCPKHQARKFANSEITNQELIDKSQLLVNGVRIALDLQLVEQLRSAWWLRESV
Ga0207693_101006253	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MKDILDQVPDDARIDFYNFPVVSALPFASNGKERSEALEYLCPKHQARKFANSEITNQELIDKSQLLVNGVRIALDLQLVEQLRSAWWLR
Ga0207665_104229061	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VPDDARIDFYNFPVVSALPFASNGKERSEALEYLCPKHQARKFANSEITNQELIDKSQLLVNGVRIALDLQLVEQLRSAWWLRESA
Ga0209158_11559593	3300026333	Soil	SVVNMLNSASGGKERSEAIEFLLPRNLARKFANSEITNQELLDKGQVLVNGVRIALNLQAAE
Ga0209377_11561323	3300026334	Soil	APKMKDVLDLIPSDLPVDYYDFSVVNMLNSASGGKERSEAIEFLLPRNLARKFANSEITNQELLDKGQVLVNGVRIALNLQAAE
Ga0207765_1176951	3300026819	Tropical Forest Soil	VAPKMKDVLDRIPSDLPVDYYVFSVVNPLSPTSLGKERSEAIEFLFPKALAQRFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0207858_10194672	3300026909	Tropical Forest Soil	DFSVVNPLSPTSVGKERSEAIEFLFPKTSAQKFANNEITNQDLIDKSQVLVNGVRIALNLQLVE
Ga0207840_10331272	3300026910	Tropical Forest Soil	MKDVLDRIPSEVPVDYYDFSVVNPLSPTSVGKERSEAIEFLFPKALAQRFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0207816_10457001	3300026934	Tropical Forest Soil	PKMKDVLDRIPSDLPVDYYVFSVVNPLSPTSLGKERSEAIEFLFPKALAQRFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0207803_10071211	3300027000	Tropical Forest Soil	VDFYDFSVVNPLTPTSLGKERSEAIEYLFPKKLAQRFANNEVTNQELIDKSQVLINGVRIALNLQLVE
Ga0207762_10569851	3300027063	Tropical Forest Soil	NVPKDANFDFYDFSIVNLFATAPGTKERSEAIEFVLPRNLAQQFADSEITNQALIDKSQVLINGVRIALNLQLVE
Ga0209004_10307192	3300027376	Forest Soil	VVYYDFSVVNSLNSASGGKERSETIEFLLPHNLAWKFTNAEIANQELQDKGQMLVNGVRINLNLQAAE
Ga0209422_10626661	3300027629	Forest Soil	YYDFSVVNTLNSASGGKERSEAIEFLLPRNLARKFANSDITNQELLDRGQVLVNGVRIALNLQLVE
Ga0209009_10644563	3300027667	Forest Soil	MKDILDKAPDEPAAELYVFSIVNPLTVPGSKERSEAVDFVIPKKLAHQFANSEITNQQLIDKSQVLVN
Ga0209465_105454533	3300027874	Tropical Forest Soil	IPGELPFDYYDFSVINPLLSNSGGKERSEATEFLLPRTLAQKFVNLEITNQELLDKGQVLVNGVRIALNLQMAE
Ga0209698_110011941	3300027911	Watersheds	YKRAALTFDLFVAPKMKDVLDRLPSDLPVDYYDFSVVNALAPGSGGKERSEAVEFLLPRNLAQKFANSEITNQELIDKGQVLVNGVRVALNLQMVE
Ga0307482_10173804	3300030730	Hardwood Forest Soil	MLNSESGGKGRSGAIEFLLPRILARKFATAHVTNQELLDKGQVLVNGVRIALNLQAAE
Ga0170822_115573921	3300031122	Forest Soil	FDLFVAPKIKDLLDRIPGGWPVDYYDFSVVNLLTPGTGVKERSEAIEFLLPKDLSQKFANSEITNQELLDKGQILVNGVRIALNLQLAE
Ga0318573_105110171	3300031564	Soil	DVLDRIPSDLPVDYYVFSVVNPLSPTSLGKERSEAIEFLFPKTLAQRFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0310915_101585523	3300031573	Soil	TFDLFVAPKVKDVLDRIPSDVPVDYYDFSVVNPLSPTSVGKERSEAIEFLFPKTLTQKFANTEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0310915_105196361	3300031573	Soil	AQTFDLFVAPKMKDVLDRIPSDVPVDYYDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0310915_109781451	3300031573	Soil	YDFSVVNPLSPTSVGKERSEAIEFLLPKKLAQSFANNEVTNQELIDKGLVLVNGVRIALSLQLVE
Ga0318561_102339502	3300031679	Soil	PKMKDVLDRIPSDVPVDYYDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0306917_101122153	3300031719	Soil	DRIPSDVPVDYYDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0307469_116085831	3300031720	Hardwood Forest Soil	LTSNGKERSEALEYLCPTNLARKFANSEITNQELIDKSQVLVNGVRIALDLQLVEQLRSAWWLRESV
Ga0306918_106285181	3300031744	Soil	SVVNPLSPTSLGKERSEAIEFLFPKTLAQRFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0318557_103903581	3300031795	Soil	PVDYFDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0318568_107994001	3300031819	Soil	VVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLV
Ga0310917_101244672	3300031833	Soil	VLDVYDFAVVNPLASAPGAKERSEAIEFVFPKTFARQFTNSEITNQALIDKSQVLINGVRIALNLQLVE
Ga0310917_108490421	3300031833	Soil	VNPLSPTSLGKERSEAIEFLFPKQLAQEFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0306923_103837881	3300031910	Soil	KRAAQTFDLFVAPKMKDVLDRIPSDVPVDYFDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0306921_120015931	3300031912	Soil	APRMKDVLDHVPNDVPVDYYDFSVVNPLSPTSTGKERSEAIEFLLPKTLAQKFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0306921_120523642	3300031912	Soil	YNFSVVNALPFTSNGKERSEALEYLCPKNAARQFVNSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0310916_100688154	3300031942	Soil	SDVPVDYYDFSVVNPLSPTSVGKERSEAIEFLFPKTLTQKFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0310916_107403241	3300031942	Soil	RIPSDVPVDYYDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQEFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0310910_105162332	3300031946	Soil	LFVAPKMKDVLDRIPSDVPVDYYDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0310910_111694971	3300031946	Soil	VKDVLDRIPSDVPVDYYDFSVVNPLSPTSVGKERSEAIEFLFPKTLTQKFANTEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0310909_102986211	3300031947	Soil	RIPSDVPVDYYDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0310909_105806133	3300031947	Soil	QTFDLFVAPKMKDVLDRIPSDLPVDYYVFSVVNPLSPTSLGKERSEAIEFLFPKTLAQRFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0306926_106612752	3300031954	Soil	FVAPKMKDVLDRIPSDVPVDYYDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0306922_107436701	3300032001	Soil	DVPVDYYDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQEFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0318559_102687401	3300032039	Soil	YYVFSVVNSLSPTSIGKERSEAIEFLFPKTLAQRFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0318558_106568151	3300032044	Soil	PVDYYDFSVVNPLSPTSLGKERSEAIEFLFPKQLAQEFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0318575_105234961	3300032055	Soil	FSVVNPLSPTSLGKERSEAIEFLFPKQLAQKFVNNEITNQELIDKSQVLVNGVRIALTLQLVE
Ga0318533_101874743	3300032059	Soil	DLPVDYYDFSVVNPLTPTAVGKERSEAIEFLFPKNLSQRFANSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0306924_109002461	3300032076	Soil	DLPVDYYDFSVVNLLRPNSVGQERSEAIEFLLLKALTQKFANNEITNQELLDKGQVLVNGVRIALNLELVE
Ga0306924_119883432	3300032076	Soil	NFSVVNALPFTSNGKERSEALEYLCPKNAARQFVNSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0311301_102281646	3300032160	Peatlands Soil	DKIPDDSAIAVYDFSVVNPLTSGISAKERSEAVEFILPAALARQFANNEITNQALIDKSQVLVNGVRIALNLQLVE
Ga0307470_103418681	3300032174	Hardwood Forest Soil	VNTLNSNTGGKERSEAIEFLLPRDLARKFTNSDITNQELLDKGQVLINGVRIALNLQAAE
Ga0310914_110720931	3300033289	Soil	MKDVLDRIPGDVPVDYYDFSVVNPLSPTSVGKERSEAIEFLLPKKLAQSFANNEVTNQELIDKGLVLVNGVRIALSLQLVE
Ga0310914_116651471	3300033289	Soil	APKMKDILEEVPDDAPIDFYNFSVVNALPFTSNGKERSEALEYLCPKNAARQFVNSEITNQELIDKSQVLVNGVRIALNLQLVE
Ga0310914_117683961	3300033289	Soil	YYDFSVVNALVSSSGGKERSEAIEFLLPKALAVKFANAEITNQELLDKSQVLVNGVRIALNLQLAE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F057715

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences