Metagenome Family F057728

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F057728
Family Type	Metagenome
Number of Sequences	136
Average Sequence Length	39 residues
Representative Sequence	MFFHLPFGHAEVRVDSRDPHKIRSAAALDVIRRVRARRS
Number of Associated Samples	111
Number of Associated Scaffolds	136

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.35 %
% of genes near scaffold ends (potentially truncated)	19.85 %
% of genes from short scaffolds (< 2000 bps)	72.06 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (98.529 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (22.059 % of family members)
Environment Ontology (ENVO)	Unclassified (38.235 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (63.971 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.87% β-sheet: 11.94% Coil/Unstructured: 61.19%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 136 Family Scaffolds
PF05534	HicB	36.03
PF13349	DUF4097	13.24
PF13345	Obsolete Pfam Family	9.56
PF01464	SLT	6.62
PF07690	MFS_1	5.15
PF00575	S1	3.68
PF05977	MFS_3	3.68
PF04851	ResIII	2.94
PF02687	FtsX	0.74
PF08681	DUF1778	0.74
PF09861	Lar_N	0.74
PF01121	CoaE	0.74
PF03575	Peptidase_S51	0.74
PF00476	DNA_pol_A	0.74
PF07098	DUF1360	0.74

COG ID	Name	Functional Category	% Frequency in 136 Family Scaffolds
COG1598	Antitoxin component HicB of the HicAB toxin-antitoxin system	Defense mechanisms [V]	36.03
COG4226	Predicted nuclease of the RNAse H fold, HicB family	General function prediction only [R]	36.03
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	3.68
COG0237	Dephospho-CoA kinase	Coenzyme transport and metabolism [H]	0.74
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.74
COG4453	Uncharacterized conserved protein, DUF1778 family	Function unknown [S]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.53 %
Unclassified	root	N/A	1.47 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.53 %
Unclassified	root	N/A	1.47 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.53 %
Unclassified	root	N/A	1.47 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	94.85 %
Unclassified	root	N/A	1.47 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	94.85 %
Unclassified	root	N/A	1.47 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	23.53 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6.62 %
Unclassified	root	N/A	1.47 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	7.35 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	5.15 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.47 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.47 %
Unclassified	root	N/A	1.47 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	7.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.15 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.47 %
Unclassified	root	N/A	1.47 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	7.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.15 %
Unclassified	root	N/A	1.47 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.74 %
Hamadaea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea	0.74 %

Name	Rank	Taxonomy	Distribution
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	7.35 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5.15 %
Unclassified	root	N/A	1.47 %
Hamadaea tsunoensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea tsunoensis	0.74 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.74 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig64943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	986	Open in IMG/M
2170459010\|GIO7OMY01A5XWV	Not Available	502	Open in IMG/M
3300000956\|JGI10216J12902_112709132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	616	Open in IMG/M
3300001431\|F14TB_101066408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	626	Open in IMG/M
3300001431\|F14TB_102047607	All Organisms → cellular organisms → Bacteria	1258	Open in IMG/M
3300001686\|C688J18823_10981706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	536	Open in IMG/M
3300002568\|C688J35102_117974440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300002568\|C688J35102_119726763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	759	Open in IMG/M
3300002568\|C688J35102_119810404	Not Available	781	Open in IMG/M
3300002568\|C688J35102_120246284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	947	Open in IMG/M
3300004081\|Ga0063454_100376153	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	936	Open in IMG/M
3300004114\|Ga0062593_100890529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	898	Open in IMG/M
3300004157\|Ga0062590_101887780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300004463\|Ga0063356_100605657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1482	Open in IMG/M
3300004479\|Ga0062595_100988478	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	721	Open in IMG/M
3300004480\|Ga0062592_100625291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	921	Open in IMG/M
3300005166\|Ga0066674_10112340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1271	Open in IMG/M
3300005171\|Ga0066677_10008996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4246	Open in IMG/M
3300005175\|Ga0066673_10335351	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	883	Open in IMG/M
3300005175\|Ga0066673_10609691	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	634	Open in IMG/M
3300005176\|Ga0066679_10504607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300005178\|Ga0066688_10849295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	567	Open in IMG/M
3300005179\|Ga0066684_10039575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2636	Open in IMG/M
3300005179\|Ga0066684_10589282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	746	Open in IMG/M
3300005184\|Ga0066671_10102976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Hamadaea → Hamadaea tsunoensis	1587	Open in IMG/M
3300005186\|Ga0066676_10106080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1713	Open in IMG/M
3300005328\|Ga0070676_11349161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	546	Open in IMG/M
3300005332\|Ga0066388_100221150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2523	Open in IMG/M
3300005332\|Ga0066388_103885332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	762	Open in IMG/M
3300005338\|Ga0068868_100699490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	907	Open in IMG/M
3300005339\|Ga0070660_100067984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2777	Open in IMG/M
3300005406\|Ga0070703_10111479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	980	Open in IMG/M
3300005440\|Ga0070705_100736935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	778	Open in IMG/M
3300005445\|Ga0070708_100049621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3714	Open in IMG/M
3300005445\|Ga0070708_100119050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2434	Open in IMG/M
3300005451\|Ga0066681_10407948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	835	Open in IMG/M
3300005454\|Ga0066687_10179065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1143	Open in IMG/M
3300005468\|Ga0070707_100306339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1544	Open in IMG/M
3300005471\|Ga0070698_100098828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2892	Open in IMG/M
3300005526\|Ga0073909_10147939	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	977	Open in IMG/M
3300005556\|Ga0066707_10512320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	778	Open in IMG/M
3300005559\|Ga0066700_11006998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300005560\|Ga0066670_10233022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1113	Open in IMG/M
3300005560\|Ga0066670_10464482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	780	Open in IMG/M
3300005576\|Ga0066708_10233915	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1164	Open in IMG/M
3300005618\|Ga0068864_100997831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	830	Open in IMG/M
3300005764\|Ga0066903_100005900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10739	Open in IMG/M
3300005764\|Ga0066903_100127157	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3568	Open in IMG/M
3300005764\|Ga0066903_100203345	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	2968	Open in IMG/M
3300006046\|Ga0066652_100153433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1934	Open in IMG/M
3300006049\|Ga0075417_10000317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10277	Open in IMG/M
3300006163\|Ga0070715_10013621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2991	Open in IMG/M
3300006791\|Ga0066653_10016566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2686	Open in IMG/M
3300006796\|Ga0066665_10088058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2249	Open in IMG/M
3300006796\|Ga0066665_11090047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	609	Open in IMG/M
3300006797\|Ga0066659_10227170	All Organisms → cellular organisms → Bacteria	1383	Open in IMG/M
3300006871\|Ga0075434_100439322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1326	Open in IMG/M
3300006954\|Ga0079219_10028108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	2185	Open in IMG/M
3300009137\|Ga0066709_101571778	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	944	Open in IMG/M
3300009147\|Ga0114129_12454449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	624	Open in IMG/M
3300009545\|Ga0105237_10773989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	966	Open in IMG/M
3300010044\|Ga0126310_10002275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	7715	Open in IMG/M
3300010359\|Ga0126376_10704076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	972	Open in IMG/M
3300010376\|Ga0126381_101158831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1117	Open in IMG/M
3300010397\|Ga0134124_12219863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	589	Open in IMG/M
3300012198\|Ga0137364_11132901	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	588	Open in IMG/M
3300012200\|Ga0137382_10554556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	819	Open in IMG/M
3300012200\|Ga0137382_10815211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	672	Open in IMG/M
3300012200\|Ga0137382_10996201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	602	Open in IMG/M
3300012201\|Ga0137365_10050363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3155	Open in IMG/M
3300012206\|Ga0137380_11012417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	710	Open in IMG/M
3300012208\|Ga0137376_10214642	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1666	Open in IMG/M
3300012208\|Ga0137376_10531859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1019	Open in IMG/M
3300012208\|Ga0137376_11812680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	500	Open in IMG/M
3300012210\|Ga0137378_11106510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	707	Open in IMG/M
3300012211\|Ga0137377_10135466	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2354	Open in IMG/M
3300012350\|Ga0137372_10572134	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	832	Open in IMG/M
3300012958\|Ga0164299_10469588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	828	Open in IMG/M
3300012975\|Ga0134110_10541372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534	Open in IMG/M
3300012989\|Ga0164305_10048224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2476	Open in IMG/M
3300013296\|Ga0157374_11100081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	815	Open in IMG/M
3300014150\|Ga0134081_10076006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1032	Open in IMG/M
3300014154\|Ga0134075_10494541	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300014157\|Ga0134078_10107448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1052	Open in IMG/M
3300014968\|Ga0157379_11322995	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	696	Open in IMG/M
3300015371\|Ga0132258_10041797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10416	Open in IMG/M
3300017654\|Ga0134069_1143415	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	796	Open in IMG/M
3300018027\|Ga0184605_10004831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4820	Open in IMG/M
3300018027\|Ga0184605_10017742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2819	Open in IMG/M
3300018027\|Ga0184605_10043651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1891	Open in IMG/M
3300018061\|Ga0184619_10069938	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1549	Open in IMG/M
3300018431\|Ga0066655_10049879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2152	Open in IMG/M
3300018431\|Ga0066655_10737681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	668	Open in IMG/M
3300018433\|Ga0066667_10020967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3475	Open in IMG/M
3300018433\|Ga0066667_10310284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1232	Open in IMG/M
3300018433\|Ga0066667_10952780	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	740	Open in IMG/M
3300018468\|Ga0066662_12468356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	548	Open in IMG/M
3300018482\|Ga0066669_10134321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1789	Open in IMG/M
3300018482\|Ga0066669_10406032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1155	Open in IMG/M
3300022756\|Ga0222622_10088678	All Organisms → cellular organisms → Bacteria	1870	Open in IMG/M
3300022756\|Ga0222622_11093730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	586	Open in IMG/M
3300025711\|Ga0207696_1071510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
3300025885\|Ga0207653_10002274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	6122	Open in IMG/M
3300025898\|Ga0207692_10015471	All Organisms → cellular organisms → Bacteria	3358	Open in IMG/M
3300025899\|Ga0207642_11031854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	530	Open in IMG/M
3300025905\|Ga0207685_10127354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1126	Open in IMG/M
3300025910\|Ga0207684_10307903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1365	Open in IMG/M
3300025922\|Ga0207646_10056754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3499	Open in IMG/M
3300026023\|Ga0207677_10880766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	806	Open in IMG/M
3300026300\|Ga0209027_1015271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2907	Open in IMG/M
3300026300\|Ga0209027_1146767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	806	Open in IMG/M
3300026306\|Ga0209468_1025648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2081	Open in IMG/M
3300026312\|Ga0209153_1006532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3647	Open in IMG/M
3300026318\|Ga0209471_1336021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	501	Open in IMG/M
3300026343\|Ga0209159_1093270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1325	Open in IMG/M
3300026377\|Ga0257171_1098469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300026529\|Ga0209806_1004133	All Organisms → cellular organisms → Bacteria	8524	Open in IMG/M
3300026530\|Ga0209807_1210188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	674	Open in IMG/M
3300026538\|Ga0209056_10024384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5841	Open in IMG/M
3300026550\|Ga0209474_10136942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1607	Open in IMG/M
3300027748\|Ga0209689_1383688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	537	Open in IMG/M
3300027873\|Ga0209814_10006437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	4520	Open in IMG/M
3300028705\|Ga0307276_10028200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1148	Open in IMG/M
3300028705\|Ga0307276_10041376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	994	Open in IMG/M
3300028714\|Ga0307309_10153914	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	583	Open in IMG/M
3300028715\|Ga0307313_10016890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1940	Open in IMG/M
3300028791\|Ga0307290_10011258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3028	Open in IMG/M
3300028799\|Ga0307284_10022990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2019	Open in IMG/M
3300028807\|Ga0307305_10379810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300028814\|Ga0307302_10044350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2063	Open in IMG/M
3300028819\|Ga0307296_10078565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1758	Open in IMG/M
3300028878\|Ga0307278_10395333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300028881\|Ga0307277_10003627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	5925	Open in IMG/M
3300031858\|Ga0310892_10700277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	695	Open in IMG/M
3300031938\|Ga0308175_100348101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1530	Open in IMG/M
3300033475\|Ga0310811_10160849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2808	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.24%
Host-Associated	Host-Associated	11.76%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.82%
Plants	Host-Associated → Plants	11.76%
Aquatic	Environmental → Aquatic	4.41%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.82%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.35%
Sediment	Environmental → Aquatic → Sediment	4.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.41%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.24%
Loam	Environmental → Terrestrial → Soil → Loam	20.59%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.47%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	30.88%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.47%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.82%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	8.09%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.88%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.41%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.47%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.47%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.74%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	22.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.29%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.09%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	8.09%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	3.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.94%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.94%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.21%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.47%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.47%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.47%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.74%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.74%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.74%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025711	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026318	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 (SPAdes)	Environmental	Open in IMG/M
3300026343	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes)	Environmental	Open in IMG/M
3300026377	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-B	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026530	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_15937370	2124908045	Soil	MLFHLPFGHAEVRVDSRDPHKIRPAAALDVIRRVRARRS
F62_03052100	2170459010	Grass Soil	MWFHLPFGHADVRVDSRDPRKIRLAAANDVIRRVRARRS
JGI10216J12902_1127091322	3300000956	Soil	MFFHLPFGHADLRVDSRDPRSVRPAAALDVIRRVRARRS*
F14TB_1010664081	3300001431	Soil	MLFHLPFGHAEVRVDSRDPHKIRPAAALDVIRRVRARRS*
F14TB_1020476071	3300001431	Soil	MYVHMPFGHIEVRVDSRDPRKLGHPGALEVIRRVRGRRS*
C688J18823_109817061	3300001686	Soil	MFIQLPFGHTEVRVDHRDPRQIRSNAALAIIRRVRAGKS*
C688J35102_1179744402	3300002568	Soil	MLFHLPFGHAEVRVDSRDPHKISPAAANDIIRRVRARRP*
C688J35102_1197267632	3300002568	Soil	MFFHLPFGHAEVRVDTRDPHQITQTAALDVIRRVRARRRP*
C688J35102_1198104042	3300002568	Soil	MFIQLPFGHTEVRVDHRDPRQIRSTAALAIIRRVRNARS*
C688J35102_1202462842	3300002568	Soil	MFIQLPFGHTEVRVDHRDPRKIRSTAALSIIRRVRAGRS*
Ga0063454_1003761532	3300004081	Soil	MLFHLPFGHAEVRVDSRDPHKISPAAANDVIRRVRARRP*
Ga0062593_1008905292	3300004114	Soil	MFAHLPYGHVEVRVDSRDPRKLAPASSLEIIRRIRGRRS*
Ga0062590_1018877802	3300004157	Soil	MFAHLPYGHVEVRVDSRDPRKLAPTSSLEIIRRIRGRRS*
Ga0063356_1006056573	3300004463	Arabidopsis Thaliana Rhizosphere	MLFHLPFGHADMRVDSRNPQNYRPAAALDVIRRVRARRS*
Ga0062595_1009884782	3300004479	Soil	MFFHLPFGHAEVRVDSRDPRKNGAVSALDIIRRTRGRRS*
Ga0062592_1006252912	3300004480	Soil	MFFHLPFGHAEVRVDSRDPRKNGAVSALDVIRRTRGRRS*
Ga0066674_101123403	3300005166	Soil	MLFHLPFGHAEVRIDSRDPHKIHSAAALDVIRRVRARRS*
Ga0066677_100089964	3300005171	Soil	MFFHLPFGHAEVRVDSRDPHKIRATPALEVIRRVRARRS*
Ga0066673_103353512	3300005175	Soil	MYVHMPFGHIEVRVDSHEPRKLGHAGALDVIRRVRRRRS*
Ga0066673_106096912	3300005175	Soil	MFLHLPFGHAEVRVDARDPKKLRPAGALDVIRRVRARKS*
Ga0066679_105046072	3300005176	Soil	MFFHLPFGHAEMRVDSRDPHKLRPTPALEVIRRVRARRS*
Ga0066688_108492952	3300005178	Soil	MLFHLPFGHAEVRVDSRDPHKIRSTAALDVIRRVRARRS*
Ga0066684_100395753	3300005179	Soil	MFFHLPFGHAEVRVDSRDPHKIRLAGANEVIRRVRARRS*
Ga0066684_105892821	3300005179	Soil	MFVQLPFGHAETRIDPREPRKLAPTSALEVIRRVRRCAS*
Ga0066671_101029762	3300005184	Soil	MFLHLPFGHAEVRVDARDPRKLRPAGALDVIRRVRARKS*
Ga0066676_101060802	3300005186	Soil	MFFHLPFGHAEVRVDARDPHKIRPRAALDVIRCVRARRS*
Ga0070676_113491612	3300005328	Miscanthus Rhizosphere	MLFHLPFGHAEVRVDSRNPQKIRSAAALDVIRRVRARRS*
Ga0066388_1002211502	3300005332	Tropical Forest Soil	MYVHLPMGHIEVRVDSRNPHKLGRPGANEIIRRVRGRRS*
Ga0066388_1038853322	3300005332	Tropical Forest Soil	MFAHLPYGHVEVRVDSRDPRKLAPAGSLEIIRRIRGRRS*
Ga0068868_1006994902	3300005338	Miscanthus Rhizosphere	MFFHLPFGHAEVRVDSRDPHKIRSAAALDVIRRVRARRS*
Ga0070660_1000679845	3300005339	Corn Rhizosphere	MLFHLPFGHAEVRVDSRNPHKIRSAAALDVIRRVRARRS*
Ga0070703_101114792	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MLFHLPFGHAEVRVDSRDPHKIRSAAALDVIRRVRARRS*
Ga0070705_1007369352	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MFFHLPFGHTEVRVDSRDPRKNGAVSALDVIRRTRGRRS*
Ga0070708_1000496212	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MFFHLPFGHAEVRVDARDPHKIRPAAALDVIRRVRARRS*
Ga0070708_1001190504	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLFHLPFGHAEVRVDSRDPHKIRSAAANDVIRRVRARRS*
Ga0066681_104079482	3300005451	Soil	MYVHMPLGHIEVRVDSHDPRKLGHAGALDVIRRVRRRRS*
Ga0066687_101790652	3300005454	Soil	MLFHLPFGHAEVRVDSRDPHKICPAAAHDVIRRVRARRS*
Ga0070707_1003063393	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MFFHLPFGHTEVRVDSRDPRKNGALSALEVIRRTRGRRS*
Ga0070698_1000988283	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MFFHLPFGHTEVRVDSRDPRKNGAVSALEVIRRTRGRRS*
Ga0073909_101479392	3300005526	Surface Soil	MFIQLPFGHTEARVDHRDPRKIRSTTAHEIIRRVRARRS*
Ga0066707_105123201	3300005556	Soil	HLPFGHAEVRVDSRDPHKIRSAAALDVIRRVRARRS*
Ga0066700_110069982	3300005559	Soil	MLFHLPFGHAEVRVDSRDPHKFSPAAANDVIRRVRARRP*
Ga0066670_102330221	3300005560	Soil	VMYVHMPFGHIEVRVDSHDPRKLGHAGALDVIRRVRRRRS*
Ga0066670_104644822	3300005560	Soil	MYVHMPLGHIEVRVDSRDPRKLGHPGALEVIRRVRGRRS*
Ga0066708_102339151	3300005576	Soil	VKEGKMFFHLPFGHAEVRVDPRDPRKMCPAGALEVIRRVRARRS*
Ga0068864_1009978313	3300005618	Switchgrass Rhizosphere	MFAHLPFGHVEVRVDSRDPRKLAPASSLEIIRRIRGRR
Ga0066903_1000059003	3300005764	Tropical Forest Soil	MFVHLPFGHVEVRVDSRDPRKLGQPGALEVIRRVRGRRS*
Ga0066903_1001271573	3300005764	Tropical Forest Soil	MYVHLPLGHIEVRVDSRNPHKLGRPGANEIIRRVRGRRS*
Ga0066903_1002033452	3300005764	Tropical Forest Soil	MYVHLPLGHIEVRIDSRDPHKLGHPGALDVIRRVRGRRS*
Ga0066652_1001534332	3300006046	Soil	MYVHLPTGHIEVRVDSRDPRKLGHAGALDVIRRVRGRRS*
Ga0075417_1000031714	3300006049	Populus Rhizosphere	MYVHMPFGHIEVRVDSRDPRKLGHAGALDVIRRVRGRRS*
Ga0070715_100136212	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MFAHLPYGHVEVRVDSRDPRKLAPTSSLEIIRRTRGRRS*
Ga0066653_100165661	3300006791	Soil	MYVHMPFGHIEVRVDSHDPRKLGHAGALDVIRRVRRRRS*
Ga0066665_100880583	3300006796	Soil	MFFHLPFGHAEVGVDSRDPHKIRATPALEVIRRVRARRS*
Ga0066665_110900471	3300006796	Soil	MLFHLPFGHAEVRVDSHDPRKIRSADALDVIRRVRARRS*
Ga0066659_102271703	3300006797	Soil	MFFHLPFGHTEVRVDSRDPRKNGPVSALEVIRRTRGRRS*
Ga0075434_1004393222	3300006871	Populus Rhizosphere	MFAHLPYGHVEVRVDSRDPRKLAPASSLEIIRRTRGRRS*
Ga0079219_100281083	3300006954	Agricultural Soil	MFAHLRYGHVEVRVDSRDPRKLAPASSLEIIRRIRGRRS*
Ga0066709_1015717782	3300009137	Grasslands Soil	MLFHLPFGHAEVRVDSRDPHKIHSAAALDVIRRVRARRS*
Ga0114129_124544491	3300009147	Populus Rhizosphere	GEMFAHLPYGHVEVRVDSRDPRKLAPASSLEIIRRIRGRRS*
Ga0105237_107739892	3300009545	Corn Rhizosphere	MFFHLPFGHAEVRVDSRNPHKIRSAAALDVIRRVRARRS*
Ga0126310_100022755	3300010044	Serpentine Soil	MFFHLPFGHAEVRVDTRDPHNICPNAALDIIRRVRARRRS*
Ga0126376_107040761	3300010359	Tropical Forest Soil	MYVHLPLGHIEVRVDSRDPRKLGRPGSLDIIRRVRGRRS
Ga0126381_1011588312	3300010376	Tropical Forest Soil	MYVHLPFGHTEVRVDSRDPRKLGHPGALEVIRRVRGRRS*
Ga0134124_122198632	3300010397	Terrestrial Soil	FHLPFGHAEVRVDSRDPHKIRSAAALDVIRRVRARRS*
Ga0137364_111329012	3300012198	Vadose Zone Soil	LFHLPFGHAEVRVDSRDPHKISPAAANDVIRRVRARRP*
Ga0137382_105545562	3300012200	Vadose Zone Soil	LFHLSFGHAEVRIDSRDPHKIHSAAALDVIHRVRARRS*
Ga0137382_108152112	3300012200	Vadose Zone Soil	MFFHLPFGHAEVRVDSRDPHKISPAAANDVIRRVRARRP*
Ga0137382_109962011	3300012200	Vadose Zone Soil	EMLFHLPFGHVDVRVDSRNPQKDHPAAALDVIRRVRSRRS*
Ga0137365_100503633	3300012201	Vadose Zone Soil	MVFHLPFGHAEVRVDSRDPHKIRSAAALDVIRRVRARRS*
Ga0137380_110124173	3300012206	Vadose Zone Soil	MFFHLPFGHTEVRVDSRDPRKNGAVSALDVIRRTR
Ga0137376_102146423	3300012208	Vadose Zone Soil	MWFHLPFGHAEVRVDSRDPHKISPAAANDIIRRVRARRP*
Ga0137376_105318592	3300012208	Vadose Zone Soil	PELGGEMFFHLPFGHAEVRVDARDPRKIRPRAALDVIRYVRARAS*
Ga0137376_118126802	3300012208	Vadose Zone Soil	MLFHLPFGHVEVRIDSRDPHKIRSAAALDVIRRVRARRS*
Ga0137378_111065102	3300012210	Vadose Zone Soil	PFGHAEVRIDSRDPHKIRPAAALDVIRRVRARRS*
Ga0137377_101354661	3300012211	Vadose Zone Soil	MLFHLPFGHAEVRVDSRDPHKIGPAAANDVIRRVRARRS*
Ga0137372_105721341	3300012350	Vadose Zone Soil	MFVQLPFGHAEVRVDPRDPRKISPAAANDVIRRVR
Ga0164299_104695881	3300012958	Soil	MFFHLPVGHAEVRVDSRDPRKNGAVSALDVIRRTRGRRS*
Ga0134110_105413722	3300012975	Grasslands Soil	MLFHLPFGHAEVRVDSRDPHKIRATPALEVIRRVRAPRS*
Ga0164305_100482242	3300012989	Soil	MLFHLPFGHAEVRVDSRDPHKIRSGAALDVIRRVRARRS*
Ga0157374_111000812	3300013296	Miscanthus Rhizosphere	MLFHLPFGHAEVRVDSRNPHKIRSAAALDVIRSVRARRS*
Ga0134081_100760062	3300014150	Grasslands Soil	MFFHLPFGHVEVHVDTRDPHKIRATPALEVIRRVRARRS*
Ga0134075_104945412	3300014154	Grasslands Soil	MLFHLPFGHAEVRVDSRDPHKIRATPALEVIRRVRARRS*
Ga0134078_101074482	3300014157	Grasslands Soil	MLFHLPFGHAEVRVDSRDPHKIHSAAALDVIRRVGARRS*
Ga0157379_113229951	3300014968	Switchgrass Rhizosphere	GGEMLFHLPFGHAEVRVDSRDPHKIRSAAALDVIRRVRARRS*
Ga0132258_100417976	3300015371	Arabidopsis Rhizosphere	MYVQLPLGHIEVRVDSRDPHKLGRPGCNEIIRRVRGRRS*
Ga0134069_11434152	3300017654	Grasslands Soil	MLFHLPFGHAEVRIDSRDPHKIRSAAALDVIRRVRARRS
Ga0184605_100048314	3300018027	Groundwater Sediment	MFFHLPFGHAEVRVDPRDPHKIRPRAALDVIRCVRARRS
Ga0184605_100177425	3300018027	Groundwater Sediment	MLFHLPFGHAEVRVDSRDPHKIRSTAALDVIRRVRARRS
Ga0184605_100436512	3300018027	Groundwater Sediment	MFYHLAFGHAEVRVDSRDPRKNGAVSALDVIRRVRGRRS
Ga0184619_100699383	3300018061	Groundwater Sediment	MLFHLPFGHAEVRVDSRDPHKIGRAGANDVIRRVRARRS
Ga0066655_100498792	3300018431	Grasslands Soil	MFFHLPFGHAEVRVDSRDPHKIRATPALEVIRRVRARRS
Ga0066655_107376811	3300018431	Grasslands Soil	MFLHLPFGHAEVRVDARDPRKLRPAGALDVIRRVRARKS
Ga0066667_100209675	3300018433	Grasslands Soil	MFLHLPFGHAEVRVDARDPKKLRPAGALDVIRRVRARKS
Ga0066667_103102843	3300018433	Grasslands Soil	MFFHLPFGHAEVRADRRGRGKMCPAGALEVIRRVRARRS
Ga0066667_109527802	3300018433	Grasslands Soil	MLFHLPFGHAEVRVDSRDPHKISPAAANDVIRRVRARRP
Ga0066662_124683562	3300018468	Grasslands Soil	MLFHLPFGHAEVRVDSRDPHKIHSAAALDVIRRVRARRS
Ga0066669_101343211	3300018482	Grasslands Soil	HLPFGHAEVRVDSRDPHKISPAAANDVIRRVRARRP
Ga0066669_104060323	3300018482	Grasslands Soil	MYVHMPLGHIEVRVDSHDPRKLGHAGALDVIRRVRRRRS
Ga0222622_100886784	3300022756	Groundwater Sediment	MFTHLPFGHTEVRVDHRDPHKIRSTTAHEIIRRVRARRS
Ga0222622_110937301	3300022756	Groundwater Sediment	MFIHLPFGHTEVRVDHRDPHKIHSTSAHEIIRRVRARRS
Ga0207696_10715102	3300025711	Switchgrass Rhizosphere	MLFHLPFGHAEVRVDSRNPQKIRSAAALDVIRRVRARRS
Ga0207653_100022742	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MFAHLPYGHVEVRVDSRDPRKLAPTSSLEIIRRIRGRRS
Ga0207692_100154713	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MFFHLPFGHAEVRVDSRDPRKNGAVSALDVIRRTRGRRS
Ga0207642_110318542	3300025899	Miscanthus Rhizosphere	MLFHLPFGHAEVRVDSRDPHKIRSAAALDVIRRVRARRS
Ga0207685_101273541	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	FAHLPYGHVEVRVDSRDPRKLAPTSSLEIIRRIRGRRS
Ga0207684_103079032	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MLFHLPFGHAEVRVDSRDPHKIRSAAANDVIRRVRARRS
Ga0207646_100567544	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	FHLPFGHAEVRVDSRDPHKIRSAAANDVIRRVRARRS
Ga0207677_108807662	3300026023	Miscanthus Rhizosphere	MFFHLPFGHAEVRVDSRDPHKIRSAAALDVIRRVRARRS
Ga0209027_10152713	3300026300	Grasslands Soil	MLFHLPFGHAEVRIDSRDPHKIHSAAALDVIRRVRARRS
Ga0209027_11467672	3300026300	Grasslands Soil	MLFHLPFGHAEVRVDSRDPHKISPAAANDIIRRVRARRP
Ga0209468_10256483	3300026306	Soil	MFFHLPFGHAEVRVDTRDPHQITQTAALDVIRRVRARRRP
Ga0209153_10065324	3300026312	Soil	MFFHLPFGHAEVRVDSRDPHKIRLAGANEVIRRVRARRS
Ga0209471_13360212	3300026318	Soil	MFFHLPFGHAEMRVDSRDPHKLRPTPALEVIRRVRARRS
Ga0209159_10932701	3300026343	Soil	MLFHLPFGHAEVRVDSRDPHKIRSAAALDVIRRVRA
Ga0257171_10984691	3300026377	Soil	MFFHLPFGHTEVRVDSRDPRKNGPVSALDVIRRTRGRRS
Ga0209806_10041331	3300026529	Soil	LFHLPFGHAEVRVDSRDPHKISPAAANDVIRRVRARRP
Ga0209807_12101881	3300026530	Soil	MFFHLPFGHAEVGVDSRDPHKIRATPALEVIRRVRARRS
Ga0209056_100243846	3300026538	Soil	MLFHLPFGHAEVRVDSRDPHKIRATPALEVIRRVRARRS
Ga0209474_101369421	3300026550	Soil	FFHLPFGHAEVRVDSRDPHKIRATPALEVIRRVRARRS
Ga0209689_13836882	3300027748	Soil	MLFHLPFGHAEVRVDSRDPHKLRPTPALEVIRRVRARRS
Ga0209814_100064373	3300027873	Populus Rhizosphere	MYVHMPFGHIEVRVDSRDPRKLGHAGALDVIRRVRGRRS
Ga0307276_100282003	3300028705	Soil	MFFHLPFGHAEVRVDTRDPHNICPNAALDIIRRVRARRRS
Ga0307276_100413762	3300028705	Soil	MFFHLPFGHAEVRVDARDPHKIRPRAALDVIRCVRARRS
Ga0307309_101539141	3300028714	Soil	MLFHLPFGHVEVRVDSRDPHKIRSAAALDVIRRVRARRS
Ga0307313_100168903	3300028715	Soil	GGTMFTHLPFGHTEVRVDHRDPHKIRSTTAHEIIRRVRARRS
Ga0307290_100112581	3300028791	Soil	FHLPFGHAEVRVDSRDPHKIRSAAALDVIRRVRARRS
Ga0307284_100229902	3300028799	Soil	MFFHLPFGHAEVRVDARDPRKIRPRAALDVIRCVRARPS
Ga0307305_103798102	3300028807	Soil	MLFHLPFGHAEVRIDSRDPHKIRSGAALDVIRRVRARRS
Ga0307302_100443503	3300028814	Soil	PELGGEMLFHLPFGHAEVRVDSRDPHKIRSAAALDVIRRVRARRS
Ga0307296_100785653	3300028819	Soil	LPFGHAEVRVDSRDPHKIRSTAALDVIRRVRARRS
Ga0307278_103953332	3300028878	Soil	MFFHLPFGHAEVRVDSRDPHKIGRAGANDVIRRVRARRS
Ga0307277_100036274	3300028881	Soil	MFFHLPFGHAEVRVDVRDPRKIRPRAALDVIRCVRARPS
Ga0310892_107002772	3300031858	Soil	MFAHLPYGHVEVRVDSRDPRKLAPTSSLEIIRRIRG
Ga0308175_1003481013	3300031938	Soil	MFFHLPFGHAEVRVDTRDPHQISPPAALDVIRRVRARRRP
Ga0310811_101608493	3300033475	Soil	MLFHLPFGHADMRVDSRNPQNYRPAAALDVIRRVRARRS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F057728

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences