Metagenome / Metatranscriptome Family F058125

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058125
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	110 residues
Representative Sequence	VDVLPRDITTLPHVLGSDLIEYLASSSEGGSGEPDDWDPFAQAVEVIDPSRWYTTSFDATPEQSVMRWLPPDGSGLPSVAVHSQASETTVLIRHESRGRPNRRR
Number of Associated Samples	87
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	11.28 %
% of genes near scaffold ends (potentially truncated)	51.85 %
% of genes from short scaffolds (< 2000 bps)	93.33 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.69

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (55.556 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (18.518 % of family members)
Environment Ontology (ENVO)	Unclassified (33.333 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.370 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 16.67% β-sheet: 24.24% Coil/Unstructured: 59.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.69
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.69
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF13683	rve_3	4.44
PF12697	Abhydrolase_6	4.44
PF02515	CoA_transf_3	2.96
PF00106	adh_short	2.22
PF00583	Acetyltransf_1	2.22
PF13411	MerR_1	2.22
PF09557	DUF2382	1.48
PF00072	Response_reg	0.74
PF13191	AAA_16	0.74
PF13561	adh_short_C2	0.74
PF00196	GerE	0.74
PF01494	FAD_binding_3	0.74
PF01740	STAS	0.74
PF00872	Transposase_mut	0.74
PF16916	ZT_dimer	0.74
PF13560	HTH_31	0.74
PF00069	Pkinase	0.74
PF00753	Lactamase_B	0.74
PF03663	Glyco_hydro_76	0.74
PF00561	Abhydrolase_1	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	2.96
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	2.96
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.48
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.74
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.74
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.74
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.74
COG4833	Predicted alpha-1,6-mannanase, GH76 family	Carbohydrate transport and metabolism [G]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
All Organisms	root	All Organisms	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
cellular organisms	root	All Organisms → cellular organisms	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	44.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	37.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.33 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	28.15 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	6.67 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	5.19 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.48 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	6.67 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	5.19 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.48 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	5.19 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	5.19 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.48 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Streptomyces albus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albus	5.19 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	4.44 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.48 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	55.56 %
Streptomyces albus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albus	5.19 %
Pseudonocardia sp. H11422	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. H11422	2.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.48 %
Pseudonocardia sp. TRM90224	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. TRM90224	0.74 %
Pseudonocardia sp. MH-G8	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. MH-G8	0.74 %
Saccharopolyspora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001686\|C688J18823_10700773	Not Available	644	Open in IMG/M
3300002568\|C688J35102_118470987	Not Available	563	Open in IMG/M
3300002568\|C688J35102_118643001	Not Available	580	Open in IMG/M
3300002568\|C688J35102_119575824	Not Available	723	Open in IMG/M
3300004153\|Ga0063455_100038714	Not Available	1520	Open in IMG/M
3300005329\|Ga0070683_100237907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1732	Open in IMG/M
3300005338\|Ga0068868_100381019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1214	Open in IMG/M
3300005338\|Ga0068868_100459005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Saccharopolyspora	1109	Open in IMG/M
3300005347\|Ga0070668_102097055	Not Available	522	Open in IMG/M
3300005455\|Ga0070663_100094741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2217	Open in IMG/M
3300005456\|Ga0070678_101371735	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300005466\|Ga0070685_10042490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2594	Open in IMG/M
3300005466\|Ga0070685_10427408	Not Available	923	Open in IMG/M
3300005544\|Ga0070686_100374706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1076	Open in IMG/M
3300005548\|Ga0070665_100766505	Not Available	978	Open in IMG/M
3300005548\|Ga0070665_102010110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albus	583	Open in IMG/M
3300005548\|Ga0070665_102382450	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300005548\|Ga0070665_102583482	Not Available	509	Open in IMG/M
3300005615\|Ga0070702_100729294	Not Available	759	Open in IMG/M
3300005616\|Ga0068852_101005950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	852	Open in IMG/M
3300005617\|Ga0068859_100261853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1821	Open in IMG/M
3300005617\|Ga0068859_100930366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albus	953	Open in IMG/M
3300005718\|Ga0068866_10083000	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1726	Open in IMG/M
3300005840\|Ga0068870_10918355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	619	Open in IMG/M
3300006574\|Ga0074056_10995618	Not Available	762	Open in IMG/M
3300009098\|Ga0105245_10987834	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300009098\|Ga0105245_11362297	Not Available	759	Open in IMG/M
3300009100\|Ga0075418_12454761	Not Available	569	Open in IMG/M
3300009156\|Ga0111538_11604980	Not Available	820	Open in IMG/M
3300009177\|Ga0105248_12362357	Not Available	605	Open in IMG/M
3300009789\|Ga0126307_10232311	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. H11422	1482	Open in IMG/M
3300009789\|Ga0126307_10331438	All Organisms → cellular organisms → Bacteria	1225	Open in IMG/M
3300009840\|Ga0126313_10120989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1948	Open in IMG/M
3300009840\|Ga0126313_10788487	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300010036\|Ga0126305_10815383	Not Available	635	Open in IMG/M
3300010039\|Ga0126309_10917013	Not Available	582	Open in IMG/M
3300010042\|Ga0126314_10618151	All Organisms → cellular organisms → Bacteria → Terrabacteria group	791	Open in IMG/M
3300010045\|Ga0126311_10749603	Not Available	784	Open in IMG/M
3300010045\|Ga0126311_11119832	All Organisms → cellular organisms → Bacteria → Terrabacteria group	648	Open in IMG/M
3300010045\|Ga0126311_11650609	Not Available	540	Open in IMG/M
3300010166\|Ga0126306_10591881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. H11422	883	Open in IMG/M
3300010375\|Ga0105239_12135835	Not Available	651	Open in IMG/M
3300010401\|Ga0134121_11708762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	653	Open in IMG/M
3300011119\|Ga0105246_10272301	Not Available	1354	Open in IMG/M
3300011332\|Ga0126317_10357428	Not Available	628	Open in IMG/M
3300011332\|Ga0126317_10656601	Not Available	719	Open in IMG/M
3300012212\|Ga0150985_102365053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1984	Open in IMG/M
3300012212\|Ga0150985_105097986	All Organisms → cellular organisms → Bacteria	841	Open in IMG/M
3300012212\|Ga0150985_109550902	Not Available	653	Open in IMG/M
3300012212\|Ga0150985_112527414	Not Available	803	Open in IMG/M
3300012212\|Ga0150985_113377305	Not Available	1106	Open in IMG/M
3300012212\|Ga0150985_117392939	Not Available	963	Open in IMG/M
3300012212\|Ga0150985_121983331	Not Available	917	Open in IMG/M
3300012212\|Ga0150985_122197527	Not Available	606	Open in IMG/M
3300012212\|Ga0150985_122660795	Not Available	633	Open in IMG/M
3300012212\|Ga0150985_123029418	Not Available	1052	Open in IMG/M
3300012469\|Ga0150984_100003673	Not Available	931	Open in IMG/M
3300012469\|Ga0150984_105228426	Not Available	599	Open in IMG/M
3300012469\|Ga0150984_106466759	Not Available	747	Open in IMG/M
3300012469\|Ga0150984_107751200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1203	Open in IMG/M
3300012469\|Ga0150984_107755751	Not Available	791	Open in IMG/M
3300012469\|Ga0150984_115814512	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1069	Open in IMG/M
3300012469\|Ga0150984_119671940	Not Available	883	Open in IMG/M
3300012469\|Ga0150984_119715867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	795	Open in IMG/M
3300012485\|Ga0157325_1029589	Not Available	542	Open in IMG/M
3300012490\|Ga0157322_1014011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albus	696	Open in IMG/M
3300012497\|Ga0157319_1020707	Not Available	636	Open in IMG/M
3300012508\|Ga0157315_1041473	Not Available	585	Open in IMG/M
3300012515\|Ga0157338_1021412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albus	756	Open in IMG/M
3300012937\|Ga0162653_100056709	Not Available	615	Open in IMG/M
3300012941\|Ga0162652_100094254	Not Available	531	Open in IMG/M
3300013105\|Ga0157369_12384293	Not Available	536	Open in IMG/M
3300013296\|Ga0157374_11246284	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	765	Open in IMG/M
3300013307\|Ga0157372_12692448	Not Available	571	Open in IMG/M
3300013308\|Ga0157375_10090451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3119	Open in IMG/M
3300014325\|Ga0163163_10855827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	973	Open in IMG/M
3300014326\|Ga0157380_11123866	Not Available	826	Open in IMG/M
3300014745\|Ga0157377_10097706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albus	1744	Open in IMG/M
3300015371\|Ga0132258_11148495	All Organisms → cellular organisms → Bacteria	1963	Open in IMG/M
3300018422\|Ga0190265_10539704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. MH-G8	1282	Open in IMG/M
3300018422\|Ga0190265_12626439	Not Available	601	Open in IMG/M
3300018432\|Ga0190275_10202974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1877	Open in IMG/M
3300018432\|Ga0190275_10630504	Not Available	1123	Open in IMG/M
3300018432\|Ga0190275_10668313	Not Available	1093	Open in IMG/M
3300018432\|Ga0190275_13165873	Not Available	532	Open in IMG/M
3300018466\|Ga0190268_10533713	Not Available	808	Open in IMG/M
3300018469\|Ga0190270_10700082	Not Available	1005	Open in IMG/M
3300018469\|Ga0190270_10759977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	970	Open in IMG/M
3300018476\|Ga0190274_10059420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. H11422	2820	Open in IMG/M
3300018476\|Ga0190274_10414898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1312	Open in IMG/M
3300018481\|Ga0190271_11295147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	849	Open in IMG/M
3300018481\|Ga0190271_12019834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. H11422	685	Open in IMG/M
3300018920\|Ga0190273_10020857	Not Available	2937	Open in IMG/M
3300018920\|Ga0190273_10071040	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1843	Open in IMG/M
3300018920\|Ga0190273_10105155	Not Available	1590	Open in IMG/M
3300018920\|Ga0190273_10148497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1396	Open in IMG/M
3300018920\|Ga0190273_10680039	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	794	Open in IMG/M
3300019767\|Ga0190267_10018127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2031	Open in IMG/M
3300019767\|Ga0190267_10526722	Not Available	707	Open in IMG/M
3300019767\|Ga0190267_10803980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	626	Open in IMG/M
3300019767\|Ga0190267_11423421	Not Available	528	Open in IMG/M
3300024426\|Ga0196960_10065474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. TRM90224	1039	Open in IMG/M
3300025901\|Ga0207688_10029277	All Organisms → cellular organisms → Bacteria	3031	Open in IMG/M
3300025908\|Ga0207643_11033247	Not Available	531	Open in IMG/M
3300025927\|Ga0207687_11167400	Not Available	662	Open in IMG/M
3300025927\|Ga0207687_11701113	Not Available	541	Open in IMG/M
3300025937\|Ga0207669_10169335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1553	Open in IMG/M
3300025940\|Ga0207691_10258910	All Organisms → cellular organisms → Bacteria	1500	Open in IMG/M
3300025941\|Ga0207711_11680215	Not Available	578	Open in IMG/M
3300025942\|Ga0207689_11118301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albus	664	Open in IMG/M
3300026023\|Ga0207677_10511996	Not Available	1040	Open in IMG/M
3300026067\|Ga0207678_10588698	Not Available	975	Open in IMG/M
3300026095\|Ga0207676_10517671	Not Available	1135	Open in IMG/M
3300026116\|Ga0207674_11228632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	719	Open in IMG/M
3300026121\|Ga0207683_12120430	Not Available	510	Open in IMG/M
3300027809\|Ga0209574_10114706	Not Available	784	Open in IMG/M
3300028379\|Ga0268266_10390683	Not Available	1314	Open in IMG/M
3300028379\|Ga0268266_10400494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1298	Open in IMG/M
3300028596\|Ga0247821_10282104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1007	Open in IMG/M
3300028596\|Ga0247821_10309947	Not Available	964	Open in IMG/M
3300028597\|Ga0247820_11454370	Not Available	501	Open in IMG/M
3300028754\|Ga0307297_10304767	Not Available	576	Open in IMG/M
3300028810\|Ga0307294_10127704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	830	Open in IMG/M
3300031824\|Ga0307413_10221433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1383	Open in IMG/M
3300031852\|Ga0307410_11077913	Not Available	696	Open in IMG/M
3300031854\|Ga0310904_10212874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces albus	1173	Open in IMG/M
3300031938\|Ga0308175_100401046	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1433	Open in IMG/M
3300033550\|Ga0247829_10419207	Not Available	1102	Open in IMG/M
3300034006\|Ga0334934_055968	Not Available	573	Open in IMG/M
3300034030\|Ga0334952_131645	Not Available	539	Open in IMG/M
3300034136\|Ga0334933_082132	Not Available	507	Open in IMG/M
3300034173\|Ga0334925_152472	Not Available	503	Open in IMG/M
3300034391\|Ga0334917_035604	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	52.59%
Environmental	Environmental	47.41%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	52.59%
Terrestrial	Environmental → Terrestrial	45.93%
Aquatic	Environmental → Aquatic	1.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	27.41%
Rhizoplane	Host-Associated → Plants → Rhizoplane	23.70%
Freshwater	Environmental → Aquatic → Freshwater	1.48%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	1.48%
Roots	Host-Associated → Plants → Roots	0.74%
Phylloplane	Host-Associated → Plants → Phylloplane	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	14.07%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	13.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.89%
Loam	Environmental → Terrestrial → Soil → Loam	7.41%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	2.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.48%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	1.48%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.48%
Sand	Environmental → Terrestrial → Soil → Sand	0.74%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.74%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.15%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	14.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	13.33%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.33%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.44%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	3.70%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.70%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	2.96%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.48%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	1.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.48%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	0.74%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.74%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	18.52%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	8.15%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	8.15%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	5.93%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.19%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.44%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	3.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	3.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.22%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.22%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.22%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.48%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	1.48%
Hypolithic Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust	1.48%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	1.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.74%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.74%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.74%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004153	Grasslands soil microbial communities from Hopland, California, USA (version 2)	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012485	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.7.old.040610	Host-Associated	Open in IMG/M
3300012490	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610	Host-Associated	Open in IMG/M
3300012497	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510	Host-Associated	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012515	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610	Host-Associated	Open in IMG/M
3300012937	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015	Environmental	Open in IMG/M
3300012941	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t4i015	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300024426	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_5	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027809	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032080	Soil microbial communities from Southern Great Plains, Lamont, Oklahoma, United States - SGP_1_2016	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034006	Biocrust microbial communities from Mojave Desert, California, United States - 30SMC	Environmental	Open in IMG/M
3300034030	Biocrust microbial communities from Mojave Desert, California, United States - 48SNC	Environmental	Open in IMG/M
3300034136	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 29HNS	Environmental	Open in IMG/M
3300034173	Biocrust microbial communities from Mojave Desert, California, United States - 21HNC	Environmental	Open in IMG/M
3300034391	Biocrust microbial communities from Mojave Desert, California, United States - 13HMC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
C688J18823_107007731	3300001686	Soil	GSVSNRRPETAPPGANNCARSTDFTIVDVLPRDITTLPHVLGSDLIEYLAPSSDAGSDESDDWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPVGSGLPSIAVYSQASETTVLIRHESPGRPNRRR*
C688J35102_1184709871	3300002568	Soil	HYCVVPGGNNQVHSTDHAIVDVLPRDITTLPPVLGSDLIEYLTTASTATRGRPDVWDAFIEAAHVIDAGLWYRTSFDATPERSVTRWLPPDGSGLATVAIYAQGSETAVLIRHESPEQSNRSR*
C688J35102_1186430011	3300002568	Soil	MVDVLPRDVTTLPHVLGSDLIDYLATASVATASAGTWGRPDVWDPFKEAAHVIDAGLWYRTSFDATPDRSVTRWLPPDGSGLATVAVYSQGSETAVLIRHTSPERSNVVGGPALRGEKR*
C688J35102_1195758242	3300002568	Soil	MVDVLPRDITTLPHVLGCDVIEYLATASVATASAATWGRPDIWDPFKEAAHVIDADLWYRTSFDATPDRSVTRWLPPDGSGLATVAVYSQGSETAVLIRHESPERSNRRWWPRAPGEKR*
Ga0063455_1000387141	3300004153	Soil	VDVLPRDITTLPHVLGSDLIEYLAPSSDAGSDESDDWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPVGSGLPSIAVYSQASETTVLIRHESPGRPNRRR*
Ga0070683_1002379074	3300005329	Corn Rhizosphere	VDVLPRDITVLPHVLGSDLIEYLTATSAATAGTPDDWDPFAKAADVIDPRLWYMTSFDATPEQSITRWLPPSGSGLPTVIVCSQASET
Ga0068868_1003810191	3300005338	Miscanthus Rhizosphere	VHSADHVIVDVLPRDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSQASKTTVLIRYR*
Ga0068868_1004590052	3300005338	Miscanthus Rhizosphere	VDVLPRDITVLPHVLGSDLIEYLTATSAATAGTPDDWDPFAKAADVIDPRLWYMTSFDATPEQSITRWLPPSGSGLPTVIVCSQASETTVLIRYDSRGPSNASGR*
Ga0070668_1020970551	3300005347	Switchgrass Rhizosphere	TGVNNQVHLTDHAMVDVLPRDISTLPHVLGSDLIEYLATVSRGARGRFDVWDPFVEAAHVIDPDLWYRTSFDATPERSVTRWLPPDGSGMATVAVYSQGSETAVLIRHEFQERSNRRR*
Ga0070663_1000947413	3300005455	Corn Rhizosphere	VHSADHVIVDVLPRDITTLPHVLGSDLIEYLTTASVELQADPTTGMRSLKLRTWNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSGPTPG*
Ga0070678_1013717351	3300005456	Miscanthus Rhizosphere	MAYQCVVPGVNKQVHSTDYAVVDVLPRDITPLPHVLGSDLIEYLTTASSEARGRPGVWDAFMEAAHVIDPCLWYRTSFDATPDRSVTRWLPPDGSGLATVAVYSQGSETAVLIR
Ga0070685_100424903	3300005466	Switchgrass Rhizosphere	VHSADHVIVDVLPRDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSQASETTVLIRYR*
Ga0070685_104274082	3300005466	Switchgrass Rhizosphere	SVCNRRPETAPPGVNNCARSTDFTIVDVLPRDITTLPHVLGSDLIEYLAPSSDAGSDESDDWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPSIAVYSQASETTVLIRHESRGRPNRRR*
Ga0070686_1003747062	3300005544	Switchgrass Rhizosphere	CGNKRVHSADHVIVDVLPRDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSQASETTVLIRYR*
Ga0070665_1007665052	3300005548	Switchgrass Rhizosphere	GVNNCARSTDFTIVDVLPRDITTLPHVLGSDLIEYLAPSSDAGSDESDDWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPSIAVYSQASETTVLIRHESRGRPNRRR*
Ga0070665_1020101101	3300005548	Switchgrass Rhizosphere	NGVIEPRAGVNKRARSSDQATVDVLPRDITVLPHVLGSDLIEYLTATSAATAGTPDDWDPFAKAADVIDPRLWYMTSFDATPEQSITRWLPPSGSGLPTVIVCSQASETTVLIRYDSRGPSKASGR*
Ga0070665_1023824501	3300005548	Switchgrass Rhizosphere	VDVLPRDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSGPYPRIVDTGWSITRRAAA*
Ga0070665_1025834821	3300005548	Switchgrass Rhizosphere	MVDVLPRDVTTLPHVLGSDLIEYLATASVATASAGTWGRPDIWDPFKEAAHVIDAGLWYRTSFDATPDRSVTRWLPPDGSGLATVAVYSQGSETAVLIRHT
Ga0070702_1007292941	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	VDVLPRDITVLPHVLGSDLIEYLTATSAATAGTPDDWDPFAKAADVIDPRLWYMTSFDATPEQSITRWLPPSGSGLPTVIVCSQASETTVLIRYDSRGPSNAGR*
Ga0068852_1010059502	3300005616	Corn Rhizosphere	MVDVLPRDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSQASETTVLIRYR*
Ga0068859_1002618534	3300005617	Switchgrass Rhizosphere	VTIVDHLSCGNKRVHSADHVIVDVLPRDITTLPHVLGSDLIEYLTTASVELQADPTTGMRSLKLRTWNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSGPTPG*
Ga0068859_1009303662	3300005617	Switchgrass Rhizosphere	DRSGPNGVIEPRAGVNKRARSSDQATVDVLPRDITVLPHVLGSDLIEYLTATSAATAGTPDDWDPFAKAADVIDPRLWYMTSFDATPEQSITRWLPPSGSGLPTVIVCSQASETTVLIRYDSRGPSNASGR*
Ga0068866_100830004	3300005718	Miscanthus Rhizosphere	DVLPRDITTLPHVLGSDLIEYLTTASVELQADPTTGMRSLKLRTWNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSGPTPG*
Ga0068870_109183552	3300005840	Miscanthus Rhizosphere	LPHVLGSDLIEYLTTASAETPGRPYDWDAFAEAADVIDPDEWYTTSFDAMPDRSITRWLPSEKSGLATVAVYSQASETAVLIRYG*
Ga0074056_109956182	3300006574	Soil	VFSSRGQCVNKHTPSADQDTVDVLPRDITVLPHVLGSDLIDYLTATSAATAGTPDGWDPFAEAADVIDPHRWYVTSFDATPEQSITRWLPPSGSGLPTVIVCSQASETTVLIRYDSRGPSKASGR*
Ga0105245_109878343	3300009098	Miscanthus Rhizosphere	MVDVLPRDISTLPHVLGSDLIEYLATVSRGARGRFDVWDPFVEAAHVIDPDLWYRRSFDATPERSVTRWLPPDGSGMATVAVYSQGSETAVLIRHESQERSNRRR*
Ga0105245_113622971	3300009098	Miscanthus Rhizosphere	VHWTDEARVDVLPRDITTLPHVLGNDLIEYFVTASAGSAGEREDWDPFAEAAAVIDPSQWYTTSFDAAPDRSVTRWLPPDGSGLATVAVYSQAGATTVLIRYLHGGPSTHCS*
Ga0075418_124547611	3300009100	Populus Rhizosphere	TLPHVLGNDLIEYFVTASAGSAGEREDWDPFAEAAAVIDPSQWYTTSFDAAPDRSVTRWLPPDGSGLATIAVYSQAGATTVLIRYHHGGPSTHCS*
Ga0111538_116049801	3300009156	Populus Rhizosphere	RDITTLPHVLGNDLIEYFVTASAGSAGEREDWDPFAEAAAVIDPSQWYTTSFDAAPDRSVTRWLPPDGSGLATIAVYSQAGATTVLIRYHHGGPSTHCS*
Ga0105248_123623572	3300009177	Switchgrass Rhizosphere	NKRVHSADHVIVDVLPRDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSQASETTVLIRYR*
Ga0126307_102323111	3300009789	Serpentine Soil	NRPSGVNKCARPTDFTIVDVLPRDITTLPHVLGSDLIEYLAPSSDAGSDESDDWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPTIAVYSQASETTVLIRHESRGRPNRRR*
Ga0126307_103314382	3300009789	Serpentine Soil	VHSTDHATVDVLPRDITTLPHVLGSDLIEYLATASAGTWGRPGLWDPFKEAAHVIDAGLWYRTSFDATPERSVTRWLPPDGSGLATVAVYSQGSETAVLIRHDVR*
Ga0126313_101209894	3300009840	Serpentine Soil	VDVLPRDITTLPHVLGSDLIEYLAPSSDAGSDESDDWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPTIAVYSQASETTVLIRHESRGRPNRRR*
Ga0126313_107884873	3300009840	Serpentine Soil	MVDVLPRDITTLPHVLGSDLIEYLATASTEARGRPGVWDAFIEAAQVIDPCLWYRTSFDATPERSVTRWLPPDGSGLAAVAVYSPGPETAVLIRYESPERSNRSR*
Ga0126305_108153831	3300010036	Serpentine Soil	TIVDVLPRDITTLPHVLGSDLIEYLAPSSDAGSDESDDWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPTIAVYSQASETTVLIRHESRGRPNRRR*
Ga0126309_109170131	3300010039	Serpentine Soil	MVDVLPRDITTLPHVLGGDLIEYLTSASAEARGRPGVWDAFIEAAQVIDPCLWYRTSFDATPERSVTRWLPPDGSGLAAVAVYSHGTETAVLIRYESPERSNRSR*
Ga0126314_106181512	3300010042	Serpentine Soil	LAPGVNNQVHSTDHATVDVLPRDITTLPHVLGSDLIEYLATASLATASAGTWGRPDLWDPFKEAAHVIDAGLWYRTSFEATPERSVTRWLPPDGSGLATVA
Ga0126311_107496031	3300010045	Serpentine Soil	QVHSTDHATVDVLPRDITTLPHVLGSDLIEYLATASAGTWGRPGLWDPFKEAAHVIDAGLWYRTSFDATPERSVTRWLPPDESDLATVAVYSQGSETAVLIRHESPERSSRRWWPRAAR*
Ga0126311_111198322	3300010045	Serpentine Soil	VDVLPRDITTLPHVLGSDLIEYLATASLATASAGTWGRPDLWDPFKEAAHVIDAGLWYRTSFDATPDRSVTRWLPPEGSGLATVAVYSQGSETAVLIRHTSQQRSNRRWPRAPR
Ga0126311_116506091	3300010045	Serpentine Soil	MVDVLPRDITTLPHVLGSDLIGYLTSASAGARGRPGVWDAFIEAAQVIDPCLWYRTSFDATPERSVTRWLPPDGSGLATVAVYSHGAETAVLIRYESPERSNRRR*
Ga0126306_105918812	3300010166	Serpentine Soil	VDVLPRDITTLPHVLGSDLIEYLAPSSDAGSYESDAWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPTIAVYSQASETTVLIRHESRGRPNRRR*
Ga0105239_121358351	3300010375	Corn Rhizosphere	VDVLPRDITVLPHVLGSDLIEYLTATSAATAGTPDDWDPFAKAADVIDPRLWYMTSFDATPEQSITRWLPPSGSGLPTVIVCSQASETTVLIRYD
Ga0134121_117087622	3300010401	Terrestrial Soil	VDVLPRDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSQASETTVLIRYR*
Ga0105246_102723012	3300011119	Miscanthus Rhizosphere	VDVLPRDITTLPHVLGNDLIEYFVTASAGSAGEREDWDPFAEAAAVIDPSQWYTTSFDAAPDRSVTRWLPPDGSGLATIAVYSQAGATTVLIRY
Ga0126317_103574281	3300011332	Soil	RDITTLPHVLGSDLIEYLAPSSDAGSDESDDWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPSIAVYSQASETTVLIRHESRGRPNRRR*
Ga0126317_106566011	3300011332	Soil	TLPHVLGCDVIEYLATASAAAGGRPDIWDPFKEAAHVIDAGLWYRTSFDATPDRSVTRWLPPDGSGLATVAVYSQGPETAVLIRHESPQRSNRRWWPRAPR*
Ga0150985_1023650531	3300012212	Avena Fatua Rhizosphere	VDVLPRDITTLPQVLGSDLIEYLAPSSDAGSDESDDWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPVGSGLPSIAVYSQASETTVLIRHESPGRPNRRR*
Ga0150985_1050979861	3300012212	Avena Fatua Rhizosphere	MAPGVNDQVHSTDHAMVDVLPRDVTTLPHVLGSDLIDYLATASVATASAGTWGRPDVWDPFKEAAHVIDAGLWYRTSFDATPERSVTRWLPPDGPGLATVAVYA
Ga0150985_1095509021	3300012212	Avena Fatua Rhizosphere	VNDQVHSTDHATVDVLPRDITTLPHVLGSDLIEYLATASLATASAGTWGRPGLWDPFKEAAHVIDAGLWYRTSFEATPDRSVTRWLPPDGSGLATVAVYSQGPETAVLIRHESPQRSNRRWWPRAPR*
Ga0150985_1119980753	3300012212	Avena Fatua Rhizosphere	ERARSFERVMMNFEPYDVATPPCVLGSDLIEYLALASMGTPGRPDLWDPFTEAAHVIDPHLWYTTSFDATPERSVTRWVPPNGSGLATVAVYTQGPETAVLIRHGSLGRSNRGW*
Ga0150985_1125274143	3300012212	Avena Fatua Rhizosphere	VLPRDITTLPPVLGSDLIEYLTTASTATRGRPDVWDAFIEAAHVIDAGLWYRTSFDATPERSVTRWLPPDGSGLATVAIYAQGSETAVLIRHESPEQSNRSR*
Ga0150985_1133773052	3300012212	Avena Fatua Rhizosphere	MVDVLPRDITPLPHVLGCDVIEYLATASVATASAATWGRPDIWDPFKEAAHVIDADLWYRTSFDATPDRSVTRWLPPDGSGLATVAVYSQGSETAVLIRHESPERSNRRWWPRAPGEKR*
Ga0150985_1173929392	3300012212	Avena Fatua Rhizosphere	DHAVVDVLPRDITTLPHVLGSDLIEYLATASMGTRSRPEVWDPFMEAAYVIDPGRWYRTSFDATPERSVTRWLPPDESGLATVAICSQGSETAVLIRHGSRSDRTVVGDPASRRERP*
Ga0150985_1219833312	3300012212	Avena Fatua Rhizosphere	MVDVLPRDITTLPHVLGSDLIEYLATASLATASAGAWGRPDVWDPFKEAAHVIDTGLWYRTSFDATPERSVTRWLPPDGSGLATVAIYAQGSETAVLIRHESPGRSNHRR*
Ga0150985_1221975271	3300012212	Avena Fatua Rhizosphere	AMVDVLPRDITTLPHVLGSDLIEYLATASLATASAATGGRPDVWDPFKEAAHVIDAGLWYRTSFDATPDRSVTRWLPPDGSGLATVAVYSQGSETAVLIRHTSPERSNRRWWPRASR*
Ga0150985_1226607952	3300012212	Avena Fatua Rhizosphere	VIGVNNLVQATDHAMVDVLPCDITTLPHVLGSDLVDYLTTASTRTRTRPGVWDPFVEAAHVIDPGIWYRTSFDATPERSVTRWLPPDGLGLAMVAVYSQGSETAVLIRYESPQRSDGRWRPPASRRERW*
Ga0150985_1230294182	3300012212	Avena Fatua Rhizosphere	RSTDFTIVDVLPRDITTLPHVLGSDLIEYLAPSSDAGSDESDAWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPTIAVYSQASETTVLIRHESRGRPNRRR*
Ga0150984_1000036731	3300012469	Avena Fatua Rhizosphere	LPRDITTLPHVLGSDLIEYLAPSSDAGSDESDAWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPTIAVYSQASETTVLIRHESRGRPNRRR*
Ga0150984_1052284261	3300012469	Avena Fatua Rhizosphere	VHWTDEARVDVLPRDITTLPHVLGNDLIEYLVTASAGSAGEREDWDPFAEAAAVIDASQWYTTSFDAAPDRSVTRWIPPDRSGLATVAVYSQAGATTVLIWYVHGGPSTHPS*
Ga0150984_1064667592	3300012469	Avena Fatua Rhizosphere	MMNFEPYDVATPPCVLGSDLIEYLALASMGTPGRPDLWDPFTEAAHVIDPHLWYTTSFDATPERSVTRWVPPNGSGLATVAVYTQGPETAVLIRHGSLGRSNRGW*
Ga0150984_1077512001	3300012469	Avena Fatua Rhizosphere	VHSTDHATVDVLPRDITTLPHVLGSDLIEYLATASLATASAGTWGRPGLWDPFKEAAHVIDAGLWYRTSFEATPDRSVTRWLPPDGSGLATVAVYSQGPETAVLIRHESPQRSNRRWWPRAPS*
Ga0150984_1077557512	3300012469	Avena Fatua Rhizosphere	VDVLPRDITTLPHVLGSDLIEYLATASVGTWGRPDLWDPFKEAAHVIDAGLWYRTSFDATPDRSVTRWLPPDGSGLATVAVYSQGSETAVLIRHTSPQRSNRRWPRAPR*
Ga0150984_1158145121	3300012469	Avena Fatua Rhizosphere	MVDVLPRDVTTLPHVLGSDLIDYLATASVATASAGTWGRPDVWDPFKEAAHVIDAGLWYRTSFEATPDRSVTRWLPPDGSGLATVAVYSQGSETAVLIRHTSPERSNIVGGPALRGEKR*
Ga0150984_1196719402	3300012469	Avena Fatua Rhizosphere	MVDVLPRDITTLPHVLGSDLIEYLAAASMGARSRPGVWDPFVEAAHVIDPDLWYSTSFDATPERSVTRWLPPDGSGLATVAVYSQGSETAVLIRYERTVVSDPGTPPYSKR
Ga0150984_1197158673	3300012469	Avena Fatua Rhizosphere	STDHEMVDVLPRDITTLPHVLGSDLIEYLATASLATASAGAWGRPDVWDPFKEAAHVIDTGLWYRTSFDATPERSVTRWLPPDGSGLATVAIYAQGSETAVLIRHESPGRSNHRR*
Ga0157325_10295891	3300012485	Arabidopsis Rhizosphere	PGPNDVFELRGRCVNKRALSAEHTTVDVLPRDITVLPHVLGSDLIEYLTATSAATEATPGDWDPFAEAADVIDPRLWYVTSLDATPERSITRWLPPSGSGLPTVLVCAQASDTTVLIRYDSRGPSKSSGR*
Ga0157322_10140112	3300012490	Arabidopsis Rhizosphere	AEHTTVDVLPRDITVLPHVLGSDLIEYLTATSAVTEATPGDWDPFAEAADVIDPRLWYVTSLDATPERSITRWLPPSGSGLPTVLVCAQASDTTVLIRYDSRGPSKSSGR*
Ga0157319_10207072	3300012497	Arabidopsis Rhizosphere	VFELRGRCVNKRALSAEHTTVDVLPRDITVLPHVLGSDLIEYLTATSAATEATPGDWDPFAEAADVIDPRLWYVTSLDATPERSITRWLPPSGSGLPTVLVCAQASDTTVLIRYDSRGPSKSSGR*
Ga0157315_10414732	3300012508	Arabidopsis Rhizosphere	RALSAEHTTVDVLPRDITVLPHVLGSDLIEYLTATSAATEATPGDWDPFAEAADVIDPRLWYVTSLDATPERSITRWLPPSGSGLPTVLVCAQASDTTVLIRYDSRGPSKSSGR*
Ga0157338_10214121	3300012515	Arabidopsis Rhizosphere	ALSAEHTTVDVLPRDITVLPHVLGSDLIEYLTATSAATEATPGDWDPFAEAADVIDPRLWYVTSLDATPERSITRWLPPSGSGLPTVLVCAQASDTTVLIRYDSRGPSKSSGR*
Ga0162653_1000567091	3300012937	Soil	VHRTDEARVDVLPRDITTLPHVLGNDLIEYFVTASAGSAGEREDWDPFAEAAAVIDPSQWYTTSFDAAPDRSVTRWLPPDGSGLATVAVYSQAGATTVLIRYLHGGPSTHCS*
Ga0162652_1000942541	3300012941	Soil	VDVLPRDITTLPHVLGNDLIEYFVTASAGSAGEREDWDPFAEAAAVIDPSQWYTTSFDAAPDRSVTRWLPPAGSGLATVAVYSQAGATAVLIWYVHGGPSTHR*
Ga0157369_123842931	3300013105	Corn Rhizosphere	HVIVDVLPRDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSQASETTVLIRYR*
Ga0157374_112462841	3300013296	Miscanthus Rhizosphere	ITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSQASETTVLIRYR*
Ga0157372_126924481	3300013307	Corn Rhizosphere	VDVLPRDITTLPHVLGNDLIEYLLTASAGSAGEREDWDPFAEAAAVIDPSQWYTTSFDAAPDRSVTRWLPPDGSGLATVAVYSQAAETTVLIRYSPALRRNHPAAAMRSTWR
Ga0157375_100904512	3300013308	Miscanthus Rhizosphere	MVDVLRRDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPDRSITRWLPPVGSGLATVAVYSQASKTTVLIRYR*
Ga0163163_108558271	3300014325	Switchgrass Rhizosphere	VHSADHVIVDVLPLDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSQASETTVLIRYR*
Ga0157380_111238661	3300014326	Switchgrass Rhizosphere	VDVLPRDITVLPHVLGSDLIEYLTATSAATAGTPDDWDPFAKAADVIDPRLWYMTSFDATPEQSITRWLPPSGSGLPTVIVCSQASETTVLIRYDSRGPS
Ga0157377_100977062	3300014745	Miscanthus Rhizosphere	VDVLPRDITVLPHVLGSDLIEYLTATSAATAGTPDDWDPFAKAADVIDPRLWYMTSFDATPEQSITRWLPPSGSGLPTVIVCSQASETTVLIRFDSRGPSNASGR*
Ga0132258_111484953	3300015371	Arabidopsis Rhizosphere	MVDVLPRDISTLPHVLGSDLIEYLATVSRGARGRFDVWDPFVEAAHVIDPDLWYRTSFDATPEGSVTRWLPPDGSGMATVAVYSQGSETAVLIRH
Ga0190265_105397042	3300018422	Soil	VDVLPRDITTLPHVLGSDLIEYLVPSSDAGSDESDDWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPTIAVYSQASETTVLIRHESRGRPNRRR
Ga0190265_126264392	3300018422	Soil	VDVLPRDITTLPHVLGSDLIEYLASSSEGGSGEPDDWDPFAQAVEVIDPSRWYTTSFDATPEQSVMRWLPPDGSGLPSVAVHSQASETTVLIRHESRGRPNRRR
Ga0190275_102029742	3300018432	Soil	VDVLPRDITTLPHVLGSDLIEYLAPSSDAGSYESDAWDPFAQAVKVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPTIAVYSQASETTVLIRHESRGRPNRRR
Ga0190275_106305041	3300018432	Soil	VIKPVANEIFSNNQVHSTDQAMVDVLPHDITTLPHVLGSDLIEYLATASAGTRSRPDVWDPFVEAAHVVDPGRWYRTSFDAAPERSVTRWLPPDESGLATVAIYLQGSETAVLIRYESPERSNRPR
Ga0190275_106683132	3300018432	Soil	LGNERARSFERVMMNFEPYDVATPPCVLGSDLIEYLALASMGTPGRPDLWDPFTEAAHVIDPHLWYTTSFDATPERSVTRWVPPNGSGLATVAVYSQGSETAVLIRHGSPGRSNRGW
Ga0190275_131658731	3300018432	Soil	DVLPHDITTLPHVLGSDLIEYLATASAGTRSRPDVWDPFVEAAHVVDPGRWYRTSFDAAPERSVTRWLPPEESGLATVAIYLQGSETAVLIRYESPERSNRRR
Ga0190268_105337131	3300018466	Soil	MVDVLPRDITTLPHVLGCDVIEYLATASVATASAATWGRPDIWDPFKEAAHVIDADLWYRTSFDATPDRSVTRWLPPDGSGLATVAVYSQGSETAVLIRHESPQRSNRRWWPRAPR
Ga0190270_107000821	3300018469	Soil	RVTKPVANEPFSNNQVHSTDQALVDVLPHDITTLPHVLGSDLIEYLATASAGTWGRPDLWDPFKEAAHVIDAGLWYRTSFDATPERSVTRWLPPDGSGLATVAVYSQGSETAVLIRHESPQRSNRRWWPRAPQ
Ga0190270_107599772	3300018469	Soil	VDVLPRDITTLPHVLGSDLIEYLAPSSDAGSYESDAWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPTIAVYSQASETTVLIRHESRGRPNRRR
Ga0190274_100594201	3300018476	Soil	DFTIVDVLPRDITTLPHVLGSDLIEYLAPSSDAGSYESDAWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPTIAVYSQASETTVLIRHESRGRPNRRR
Ga0190274_104148983	3300018476	Soil	VDVLPRDITTLPHVLGSDLIEYLAPSSDAGSDESDDWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPTIAVYSQASETTVLIRHESRGRPNRR
Ga0190271_112951472	3300018481	Soil	VHWTDEARVDVLPRDITTLPHVLGNDLIEYFVTASAGSAGEREDWDPFAEAAAVIDPSQWYTTSFDAAPDRSVTRWLPPDGSGLATVAVYSQAGATTVLIRYLHGGPSTHCS
Ga0190271_120198341	3300018481	Soil	RDITTLPHVLGSDLIEYLAPSSDAGSYESDAWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPTIAVYSQASETTVLIRHESRGRPNRRR
Ga0190273_100208576	3300018920	Soil	LTSGRVTERGRLPTPSARSSPTRPALHHRVIKPVANEIFSNNQVHSTDQAMVDVLPHDITTLPHVLGSDLIEYLATASAGTRSRPDVWDPFVEAAHVVDPGRWYRTSFDAAPERSVTRWLPPDGSGLATVAIYLQGSETAVLIRYESPERSNRRR
Ga0190273_100710402	3300018920	Soil	VCSTDFTIVDVLPRDITTLPHVLGSDLIEYLASSSEGGSGEPDDWDPFAQAVEVIDPSRWYTTSFDATPEQSVMRWLPPDGSGLPSVAVHSQASETTVLIRHESRGRPNRRR
Ga0190273_101051552	3300018920	Soil	VDVLPRDITTLPHVLGSDLIEYLAPSSDAGSDESDDWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPSIAVYSQASETTVLIRHESRGRPNRRR
Ga0190273_101484972	3300018920	Soil	MVDVLPRDITTLPHVLGSDLIGYLTAASAEAPGRPGVWDAFIEAAQVIDPCLWYRTSFDATPERSVTRWLPPDGSGLAAVAVYSHGAETAVLIRYESPERSNRSR
Ga0190273_106800391	3300018920	Soil	VLPRDITTLPHVLGRDLIEYLATASTEARGGPGVWDAFMEAAHVIGPCLLYRTSFDATPERSVTRWLPPDESGLATVAVYSQGSETAVLIRYESPERSNRRR
Ga0190267_100181271	3300019767	Soil	DFTIVDVLPRDITTLPHVLGSDLIEYLASSSEGGSGEPDDWDPFAQAVEVIDPSRWYTTSFDATPEQSVMRWLPPDGSGLPSVAVYSQASETTVLIRHESRGRPHRRR
Ga0190267_105267222	3300019767	Soil	VAPGVNDQVHSTDHALVDVLPSDITTLPPVLGSDLIEYLATASAGTWGRPGLWDPFKEAAHVIDAGLWYRTSFDATPDRSVTRWLPPDGSGLATVAVYSQGSETAVLIRHESPERSNRRWWPRAPR
Ga0190267_108039801	3300019767	Soil	VRSTDFTIVDVLPRDITTLPHVLGSDLIEYLASSSEGGSGEPDNWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPTIAVYSQASETTVLIRHESRGRPNRRR
Ga0190267_114234212	3300019767	Soil	TDQAMVDVLPHDITTLPHVLGSDLIEYLATASAGTRSRPDVWDPFVEAAHVVDPGRWYRTSFDAAPERSVTRWLPPDESGLATVAIYLQGSETAVLIRYESPERSNRRR
Ga0196960_100654742	3300024426	Soil	VDVLPCDITTRPNVLGSDLIEYLASSADDACAPGGWDPFAEAADKVIPGVVYTTSFDATPEQSVTRWLPPAGSGLATVTVLSQASGPTVMITYRR
Ga0207688_100292772	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VDVLPRDITTLPHVLGNDLIEYFVTASAGSAGEREDWDPFAEAAAVIDPSQWYTTSFDAAPDRSVTRWLPPDGSGLATIAVYSQAGATTVLIRYHHGGPSTHCS
Ga0207643_110332471	3300025908	Miscanthus Rhizosphere	SCGNKRVHSADHVMVDVLPRDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSQASETTVLIRYR
Ga0207687_111674002	3300025927	Miscanthus Rhizosphere	MVDVLPRDISTLPHVLGSDLIEYLATVSRGARGRFDVWDPFVEAAHVIDPDLWYRRSFDATPERSVTRWLPPDGSGMATVAVYSQGSETAVLIRHEFQERSNRRR
Ga0207687_117011131	3300025927	Miscanthus Rhizosphere	PRQRFVDHLSCGNKRVHSADHVMVDVLPRDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSQASETTVLIRYR
Ga0207669_101693352	3300025937	Miscanthus Rhizosphere	VHSADHVIVDVLPRDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSQASETTVLIRYR
Ga0207691_102589101	3300025940	Miscanthus Rhizosphere	DLIEYLITASAGSSGKREDWDPFTEAADVIDPSQWYTTSFDAVPARSVTRWLPPDGSGLATIAVYSQAGATTVLIRYHHGGPSTHCS
Ga0207711_116802152	3300025941	Switchgrass Rhizosphere	VIVDVLPRDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSQASETTVLIRYR
Ga0207689_111183011	3300025942	Miscanthus Rhizosphere	PRAGVNKRARSSDQATVDVLPRDITVLPHVLGSDLIEYLTATSAATAGTPDDWDPFAKAADVIDPRLWYMTSFDATPEQSITRWLPPSGSGLPTVIVCSQASETTVLIRYDSRGPSNASG
Ga0207677_105119962	3300026023	Miscanthus Rhizosphere	VDVLPRDITVLPHVLGSDLIEYLTATSAATAGTPDDWDPFAKAADVIDPRLWYMTSFDATPEQSITRWLPPSGSGLPTVIVCSQASETTVLIRYDSRGPSNASGR
Ga0207678_105886981	3300026067	Corn Rhizosphere	VHSADHVIVDVLPRDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSQASE
Ga0207676_105176711	3300026095	Switchgrass Rhizosphere	VDVLPRDITVLPHVLGSDLIEYLTATSAATAGTPDDWDPFAKAADVIDPRLWYMTSFDATPEQSITRWLPPSGSGLPTVIVCSQASETTVLIRYDSRGPSNAGR
Ga0207674_112286321	3300026116	Corn Rhizosphere	GQTSSRATLVPRQRFVDHLSCGNKRVHSADHVMVDVLPRDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPDRSITRWLPPVGSGLATVAVYSQASETTVLIRYR
Ga0207683_121204301	3300026121	Miscanthus Rhizosphere	TLVPRQRFVDHLSCGNKRVHSADHVIVDVLPRDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSQASETTVLIRY
Ga0209574_101147061	3300027809	Agave	VRSTDFTIVDVLPRDITTLPHVLGSDLIEYLAPSSDGDSGESDDWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPTIAVYSQASETTVLIRHESRGRPNRRR
Ga0268266_103906831	3300028379	Switchgrass Rhizosphere	NRRPETAPPGVNNCARSTDFTIVDVLPRDITTLPHVLGSDLIEYLAPSSDAGSDESDDWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPSIAVYSQASETTVLIRHESRGRPNRRR
Ga0268266_104004941	3300028379	Switchgrass Rhizosphere	RVHSADHVIVDVLPRDITTLPHVLGSDLIEYLTTASVGAPGRPHDWDAFAEAADVVNPDEWYTTSFDATPGRSITRWLPPVGSGLATVAVYSQASETTVLIRYR
Ga0247821_102821043	3300028596	Soil	NKRMHSPDEATVDVLPRDITTLPHVLGSDLIEYLVTASAGSSGKREGWDPFTEAAGVIDPSQWYTTSFDATPDRSVTRWLPPDGSRLATVAVYSQAAETTVLIRYAHGGPSTRCR
Ga0247821_103099471	3300028596	Soil	MVDVLPRDITTLPHVLGSDLIDYLMTTSAGTSGTPDDWNPFAEAADVIDPKRSYTTSFDATPEQSITRWLPPSGSGLPTVIVCSQASETTVLIRYDSRGPSNASGR
Ga0247820_114543701	3300028597	Soil	VNKRVHRTDEARVDVLPRDITTLPHVLGNDLIEYFVTASAGSAGEREDWDPFAEAAAVIDPSQWYTTSFDAAPDRSVTRWLPPDGSGLATVAVYSQAGATTVLIRYLHGGPSTHCS
Ga0307297_103047671	3300028754	Soil	VRSTDFTIVDVLPRDITTLPHVLGSDLIEYLAPSSEGGSGESDDWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPSIAVYSQASETTVLIRHESRGRPNRRR
Ga0307294_101277041	3300028810	Soil	VRSTDFTIVDVLPRDITTLPHVLGSDLIEYLAPSSEGGSGESDDWDPFAQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPTIAVYSQASETTVLIRHESRGRPNRRR
Ga0307413_102214332	3300031824	Rhizosphere	VDVLPRDITTLPHVLGSDLIEYLAPSSDAGSYESDAWDPFTQAVEVIDPSRWYTTSFDATPEQSIMRWLPPDGSGLPTIAVYSQASETTVLIRHESRGRPNRRR
Ga0307410_110779133	3300031852	Rhizosphere	HSADHAVVDVLPRDITTLPHVLGSDLIEYLATASAGTWGRPGLWDPFKEAAHVIDAGLWYRTSFDATPDRSVTRWLPPDGSGLATVAVYSQGPETAVLIRHESPQRSNRRWWPRAPR
Ga0310904_102128741	3300031854	Soil	VDVLPRDITVLPHVLGSDLIEYLTATSAATEATPGDWDPFAEAADVIDPRLWYVTSLDATPERSITRWLPPSGSGLPTVLVCAQASDTTVLIRYDSRGPSKSSGR
Ga0308175_1004010462	3300031938	Soil	VFSDRGRCVNKHTPAADQDTVDVLPRDITVLPHVRGSDLIEYLVATAAGPSGGPDGWDPFAEAADVIDPSRSYTTSFDANPEQSITRWLSPSGSGLPTVAVCSRGSETTVLIRYDSRGPSSASVRRAARTFFRSR
Ga0326721_101604742	3300032080	Soil	GGLLRLGNERARSFERVMMNFEPYDVATPPCVLGSDLIEYLALASMGTPGRPDLWDPFTEAAHVIDPHLWYTTSFDATPERSVTRWVPPNGSGLATVAVYSQGSETAVLIRHGSPGRSNRGW
Ga0247829_104192071	3300033550	Soil	VHWTDEARVDVLPRDITTLPHVLGNDLIEYLLTASAGSAGEREDWDPFAEAAAVIDPSQWYTTSFDAAPDRSVTRWLPPDGSGLATVAVYSQAGATTVLIRYLHGGPSTHCS
Ga0334934_055968_2_283	3300034006	Biocrust	PHVLGSDLIEYLATASTEARGRPGVWDAFMEAAHVIDPCLWYRTSFDATPERSVTRWLPPDGSGLATVAVYSQGSETAVLIRYESPERSNRHR
Ga0334952_131645_160_477	3300034030	Biocrust	MVDVLPRDITTLPHVLGSDLIGYLRSASAEAPGRPGVWDAFIEAAQVVDPCLWYRTSFDATPERSVTRWLPPDGSGLAAVAVYSHGAETAVLIRYESPERSNRSR
Ga0334933_082132_83_418	3300034136	Sub-Biocrust Soil	MVDVLPHDITTLPHVLGSDLIEYLATASAEARGRPGVWDAFSEAAHVINPCLWYRTSFDATPERSVTRWLPPDGSGLATVAVYSQGSETAVLIRYEFPERSNRRRRPRTSP
Ga0334925_152472_47_433	3300034173	Hypolithic Biocrust	LTRDTLTDGMTGVNNQVHATDHAMVDVLPRDITTLPHVLGSDLIGYLTSASAEAPGRPGLWDAFMEAAQVIDPCLWYRTSFDATPERSVTRWLPPDGSGLAAVAVYSHGAETAVLIRYESPERSNRSR
Ga0334917_035604_433_792	3300034391	Hypolithic Biocrust	VTGVNNQVHPTDYAVVDVLPRDITTLPHVLGSDLIEYLATASMEARGRPGVWDAFIEAAQVIEPCLWYRTSFDATPERSVTRWLPPDGSGLAAVAVYSHGAETAVLIRYESPERSNRSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058125

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences