NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F058194

Metagenome Family F058194

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F058194
Family Type Metagenome
Number of Sequences 135
Average Sequence Length 71 residues
Representative Sequence YVRRPTIPAGPAVQVRIIVCLLFLTMIVVAVHYGLRQLADSLDLATFLAICGAAVLVEIGIAFTWDRR
Number of Associated Samples 89
Number of Associated Scaffolds 135

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 21.48 %
% of genes near scaffold ends (potentially truncated) 41.48 %
% of genes from short scaffolds (< 2000 bps) 76.30 %
Associated GOLD sequencing projects 77
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (71.852 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(52.593 % of family members)
Environment Ontology (ENVO) Unclassified
(62.222 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(52.593 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 54.17%    β-sheet: 0.00%    Coil/Unstructured: 45.83%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.39
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 135 Family Scaffolds
PF12071DUF3551 2.96
PF12120Arr-ms 2.96
PF13378MR_MLE_C 2.96
PF03466LysR_substrate 2.96
PF01396zf-C4_Topoisom 2.22
PF02518HATPase_c 1.48
PF10074DUF2285 1.48
PF12244DUF3606 1.48
PF06441EHN 0.74
PF13458Peripla_BP_6 0.74
PF13432TPR_16 0.74
PF05239PRC 0.74
PF00034Cytochrom_C 0.74
PF13462Thioredoxin_4 0.74
PF12902Ferritin-like 0.74
PF07238PilZ 0.74
PF14487DarT 0.74
PF00656Peptidase_C14 0.74
PF03372Exo_endo_phos 0.74
PF01551Peptidase_M23 0.74
PF01757Acyl_transf_3 0.74
PF13505OMP_b-brl 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 135 Family Scaffolds
COG05962-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase foldCoenzyme transport and metabolism [H] 0.74
COG4249Uncharacterized conserved protein, contains caspase domainGeneral function prediction only [R] 0.74

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms71.85 %
UnclassifiedrootN/A28.15 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002886|JGI25612J43240_1056577All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium590Open in IMG/M
3300002886|JGI25612J43240_1062803All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300006041|Ga0075023_100009281All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2510Open in IMG/M
3300006050|Ga0075028_100086120Not Available1579Open in IMG/M
3300006050|Ga0075028_100200066All Organisms → cellular organisms → Bacteria1078Open in IMG/M
3300006354|Ga0075021_10760114Not Available625Open in IMG/M
3300007255|Ga0099791_10390160All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae670Open in IMG/M
3300007258|Ga0099793_10146436All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo1701117Open in IMG/M
3300007265|Ga0099794_10352864All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria765Open in IMG/M
3300007788|Ga0099795_10090046Not Available1188Open in IMG/M
3300007788|Ga0099795_10154206All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium943Open in IMG/M
3300007788|Ga0099795_10383749All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium635Open in IMG/M
3300009038|Ga0099829_10051701All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3046Open in IMG/M
3300009089|Ga0099828_11011236All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium740Open in IMG/M
3300009089|Ga0099828_11083948All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria712Open in IMG/M
3300009090|Ga0099827_10037357All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3563Open in IMG/M
3300010159|Ga0099796_10192620All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium823Open in IMG/M
3300010159|Ga0099796_10538691All Organisms → cellular organisms → Bacteria524Open in IMG/M
3300011269|Ga0137392_10206139Not Available1609Open in IMG/M
3300011444|Ga0137463_1018660All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2468Open in IMG/M
3300012096|Ga0137389_10950217All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria737Open in IMG/M
3300012096|Ga0137389_11285378Not Available625Open in IMG/M
3300012201|Ga0137365_10268783All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_81266Open in IMG/M
3300012202|Ga0137363_10059092All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei2779Open in IMG/M
3300012202|Ga0137363_10838078All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria780Open in IMG/M
3300012203|Ga0137399_10169714Not Available1755Open in IMG/M
3300012203|Ga0137399_10323258All Organisms → cellular organisms → Bacteria → Proteobacteria1278Open in IMG/M
3300012205|Ga0137362_10234418All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1584Open in IMG/M
3300012205|Ga0137362_10968987Not Available725Open in IMG/M
3300012205|Ga0137362_11242922Not Available629Open in IMG/M
3300012359|Ga0137385_10071631All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3083Open in IMG/M
3300012361|Ga0137360_10447022Not Available1095Open in IMG/M
3300012361|Ga0137360_11090699All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium689Open in IMG/M
3300012361|Ga0137360_11481765Not Available583Open in IMG/M
3300012582|Ga0137358_10260197All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1180Open in IMG/M
3300012582|Ga0137358_10367518Not Available974Open in IMG/M
3300012683|Ga0137398_10198049All Organisms → cellular organisms → Bacteria → Proteobacteria1323Open in IMG/M
3300012683|Ga0137398_10580808Not Available774Open in IMG/M
3300012683|Ga0137398_11001146Not Available579Open in IMG/M
3300012685|Ga0137397_10035988All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3539Open in IMG/M
3300012685|Ga0137397_10204407All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei1469Open in IMG/M
3300012685|Ga0137397_10622900Not Available802Open in IMG/M
3300012917|Ga0137395_10395075All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium989Open in IMG/M
3300012918|Ga0137396_10727955All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. STM 3843731Open in IMG/M
3300012922|Ga0137394_11057043Not Available673Open in IMG/M
3300012924|Ga0137413_10079651All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1988Open in IMG/M
3300012924|Ga0137413_10610295Not Available817Open in IMG/M
3300012925|Ga0137419_10027771All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei3420Open in IMG/M
3300012925|Ga0137419_11017806Not Available687Open in IMG/M
3300012925|Ga0137419_11110212Not Available659Open in IMG/M
3300012929|Ga0137404_10084272All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2527Open in IMG/M
3300012929|Ga0137404_10394354All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 441219Open in IMG/M
3300012929|Ga0137404_10673431All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium934Open in IMG/M
3300012930|Ga0137407_10003428All Organisms → cellular organisms → Bacteria10548Open in IMG/M
3300012944|Ga0137410_10627514Not Available890Open in IMG/M
3300012944|Ga0137410_10971098Not Available722Open in IMG/M
3300012944|Ga0137410_11861253Not Available532Open in IMG/M
3300015053|Ga0137405_1131617All Organisms → cellular organisms → Bacteria → Proteobacteria1049Open in IMG/M
3300015053|Ga0137405_1189899All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1930Open in IMG/M
3300015054|Ga0137420_1312691All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4547Open in IMG/M
3300015241|Ga0137418_10025781All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae5429Open in IMG/M
3300015264|Ga0137403_10221826All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1812Open in IMG/M
3300018000|Ga0184604_10007286All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae2172Open in IMG/M
3300018027|Ga0184605_10463800Not Available556Open in IMG/M
3300018028|Ga0184608_10005801All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4001Open in IMG/M
3300018066|Ga0184617_1013018All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1710Open in IMG/M
3300019789|Ga0137408_1274359Not Available664Open in IMG/M
3300019869|Ga0193705_1018472All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris1518Open in IMG/M
3300019874|Ga0193744_1024251All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → unclassified Parcubacteria group → Parcubacteria group bacterium GW2011_GWA2_47_81136Open in IMG/M
3300019874|Ga0193744_1065635All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae694Open in IMG/M
3300019877|Ga0193722_1145881All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium520Open in IMG/M
3300019878|Ga0193715_1098396All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei589Open in IMG/M
3300019879|Ga0193723_1046376Not Available1283Open in IMG/M
3300019881|Ga0193707_1012428All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2876Open in IMG/M
3300019882|Ga0193713_1083445All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae898Open in IMG/M
3300019882|Ga0193713_1140960Not Available652Open in IMG/M
3300019885|Ga0193747_1060482All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium938Open in IMG/M
3300019886|Ga0193727_1000324All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria17985Open in IMG/M
3300019886|Ga0193727_1000600All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales14136Open in IMG/M
3300019886|Ga0193727_1002762All Organisms → cellular organisms → Bacteria → Proteobacteria7371Open in IMG/M
3300019886|Ga0193727_1005779All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium5002Open in IMG/M
3300019999|Ga0193718_1047635Not Available936Open in IMG/M
3300019999|Ga0193718_1085588Not Available662Open in IMG/M
3300020001|Ga0193731_1001346All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6776Open in IMG/M
3300020002|Ga0193730_1002466All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae5040Open in IMG/M
3300020002|Ga0193730_1140714Not Available646Open in IMG/M
3300020004|Ga0193755_1020952All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2161Open in IMG/M
3300020004|Ga0193755_1230341Not Available510Open in IMG/M
3300020012|Ga0193732_1009548All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1680Open in IMG/M
3300020059|Ga0193745_1019898All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → unclassified Hyphomicrobiaceae → Hyphomicrobiaceae bacterium1462Open in IMG/M
3300020059|Ga0193745_1132931All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei510Open in IMG/M
3300020062|Ga0193724_1006610All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2486Open in IMG/M
3300020062|Ga0193724_1034024All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium frederickii1085Open in IMG/M
3300020199|Ga0179592_10003284All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria6822Open in IMG/M
3300022756|Ga0222622_10733418All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae719Open in IMG/M
3300022756|Ga0222622_10812859All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium683Open in IMG/M
3300024330|Ga0137417_1243486All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Leo170747Open in IMG/M
3300026341|Ga0257151_1001500All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2225Open in IMG/M
3300026355|Ga0257149_1002534All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1997Open in IMG/M
3300026358|Ga0257166_1015794All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae971Open in IMG/M
3300026361|Ga0257176_1065290Not Available584Open in IMG/M
3300026361|Ga0257176_1067334All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales576Open in IMG/M
3300026374|Ga0257146_1001970All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3492Open in IMG/M
3300026377|Ga0257171_1027097Not Available977Open in IMG/M
3300026446|Ga0257178_1039226Not Available604Open in IMG/M
3300026490|Ga0257153_1022639All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1290Open in IMG/M
3300026494|Ga0257159_1011601All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1385Open in IMG/M
3300026496|Ga0257157_1001758All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3014Open in IMG/M
3300026496|Ga0257157_1008081All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1646Open in IMG/M
3300026497|Ga0257164_1052178All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae658Open in IMG/M
3300026498|Ga0257156_1094655Not Available621Open in IMG/M
3300026551|Ga0209648_10501684All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium704Open in IMG/M
3300027381|Ga0208983_1005117All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium2364Open in IMG/M
3300027512|Ga0209179_1074235Not Available747Open in IMG/M
3300027512|Ga0209179_1125538All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium573Open in IMG/M
3300027616|Ga0209106_1005481All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2539Open in IMG/M
3300027643|Ga0209076_1064751All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1038Open in IMG/M
3300027671|Ga0209588_1001911All Organisms → cellular organisms → Bacteria5569Open in IMG/M
3300027671|Ga0209588_1075403All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1090Open in IMG/M
3300027671|Ga0209588_1087417All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1005Open in IMG/M
3300027738|Ga0208989_10135305All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium832Open in IMG/M
3300027846|Ga0209180_10049627All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2312Open in IMG/M
3300027894|Ga0209068_10383305All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei799Open in IMG/M
3300027903|Ga0209488_10198339All Organisms → cellular organisms → Bacteria1512Open in IMG/M
3300027903|Ga0209488_10219442All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1431Open in IMG/M
3300027903|Ga0209488_10233814All Organisms → cellular organisms → Bacteria → Proteobacteria1380Open in IMG/M
3300027903|Ga0209488_10256455All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM4711311Open in IMG/M
3300027903|Ga0209488_10292687All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1216Open in IMG/M
3300027910|Ga0209583_10030413Not Available1788Open in IMG/M
3300028536|Ga0137415_10039217All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4637Open in IMG/M
3300028784|Ga0307282_10295945All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium780Open in IMG/M
3300028791|Ga0307290_10362237Not Available531Open in IMG/M
3300028819|Ga0307296_10164466All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Rhodopseudomonas → Rhodopseudomonas palustris1201Open in IMG/M
3300028824|Ga0307310_10726794Not Available510Open in IMG/M
3300028878|Ga0307278_10553801Not Available501Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil52.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil22.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil10.37%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds4.44%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil2.22%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.22%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.96%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.48%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.74%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002886Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_20cmEnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300007255Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012922Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012929Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300015053Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015241Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300015264Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300018000Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coexEnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300019789Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300019869Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m2EnvironmentalOpen in IMG/M
3300019874Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a1EnvironmentalOpen in IMG/M
3300019877Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1EnvironmentalOpen in IMG/M
3300019878Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2EnvironmentalOpen in IMG/M
3300019879Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m2EnvironmentalOpen in IMG/M
3300019881Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3c2EnvironmentalOpen in IMG/M
3300019882Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H3a2EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300019999Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a1EnvironmentalOpen in IMG/M
3300020001Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a2EnvironmentalOpen in IMG/M
3300020002Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1EnvironmentalOpen in IMG/M
3300020004Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2EnvironmentalOpen in IMG/M
3300020012Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s1EnvironmentalOpen in IMG/M
3300020059Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2EnvironmentalOpen in IMG/M
3300020062Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1EnvironmentalOpen in IMG/M
3300020199Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300024330Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300026341Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-AEnvironmentalOpen in IMG/M
3300026355Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-02-AEnvironmentalOpen in IMG/M
3300026358Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-14-BEnvironmentalOpen in IMG/M
3300026361Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-BEnvironmentalOpen in IMG/M
3300026374Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-AEnvironmentalOpen in IMG/M
3300026377Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-BEnvironmentalOpen in IMG/M
3300026446Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-11-BEnvironmentalOpen in IMG/M
3300026490Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-10-AEnvironmentalOpen in IMG/M
3300026494Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-07-AEnvironmentalOpen in IMG/M
3300026496Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-AEnvironmentalOpen in IMG/M
3300026497Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-BEnvironmentalOpen in IMG/M
3300026498Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-49-AEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027381Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027512Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027616Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027671Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes)EnvironmentalOpen in IMG/M
3300027738Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028878Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI25612J43240_105657723300002886Grasslands SoilMRLCSPPNVSRGAAVQVRIIICLLFLTMIVVAVLYGLRQVADSVDLATCLAIWGAA
JGI25612J43240_106280323300002886Grasslands SoilVQVRIIVCLLLLTMVVVVDTVSATPLRQLADGVDLATFFAICGAAVLVEIGITFTWDRQ*
Ga0075023_10000928123300006041WatershedsVIGPCAYVRRPTIPAGPAVQVRIIVCLLLLTTIVVAVHYGLRQLADGVDLAIFLAICGAAVLVEIGIGFTWDRR*
Ga0075028_10008612023300006050WatershedsVQVRIIVCLLLLTMVVVVDTVSATPLRQLADGVDLATFFAICGAAVLVEIGIAFTWDRQ*
Ga0075028_10020006613300006050WatershedsVQVRIIVCLVFLTMIVVAVHYGLRQLADSVDLATFLAICGAAVLVEIGIAFTWDR
Ga0075021_1076011423300006354WatershedsVIGPCAYVRRPTIPAGPAVQVRIIVCLLFLTMIVVAVHYGLRQLADSVDLATFLAICGAAVLVEIGIAFTWDRR*
Ga0099791_1039016023300007255Vadose Zone SoilLIVIGPCVYVRRPTIPAGPAVQIRIIICLLFLTMIVVTVLYGLREVADSVDLATIWGAAALVEIGIAFTWDRR*
Ga0099793_1014643613300007258Vadose Zone SoilLIVIGPCAYVRRPTIPAGPAVQVRIIVCLLFLTMIVVAVHYGLRQLADSVDLATFLAICGAAVLVEIGIAFTWDRR*
Ga0099794_1035286443300007265Vadose Zone SoilLKNEVRSDHILFDALIVIGPCAYVRRPTIPAGPAVQVRIIICLLFLTMIVVAVLYGLRQVADSVDLATCLAIWGAAA
Ga0099795_1009004633300007788Vadose Zone SoilMFAAQRLSQGRVQVRIIICLLFLTMIVVAVLYGLREVADSVDLATCLAIWGTAVLVEIGITFTWDRR*
Ga0099795_1015420633300007788Vadose Zone SoilLIVIGPCVYVRRPTIPAGPAVQIRIIICLLFLTMIVVTVLYGLREVADSVDLATIWGAAELVEIGIAFTWDRR*
Ga0099795_1038374913300007788Vadose Zone SoilMFASQRFPWGPAVQVRIIVCLLLFTMFVVVDTVSATPLRQLADGVDLATFFAICGAAVLVEIGITFTWDRQ*
Ga0099829_1005170143300009038Vadose Zone SoilLKNEARTDHILFDALIVIGPCAYVRRPTIPPGPAMQVRIIVCLLFLTMVVVAVHYGLRQLADSVDLATFLAICGAAVLVEIGIAFTWDRR*
Ga0099828_1101123613300009089Vadose Zone SoilLIVIGPCAYVRRPTIPAGPAVQVRIIVCLLLLTTIVVAVHYGLRQLAHSVDLATFLAICGAAVL
Ga0099828_1108394813300009089Vadose Zone SoilLKNEARTDNILFDALIVIGPCAYVRRPTIPAGPAVQVRIIVCLLFLTMIVVAVHYGLRQLADSADLATFLAICGAAVLVEIGIAFTWDRR*
Ga0099827_1003735763300009090Vadose Zone SoilLKNEARTDHILFDALIVIGPCAYVRRPTIPPGPAMQVRIIVCLLFLTMIVVAVHYGLRQLADSVDLATFLAICGAAVLVEIGIAFTWDRR*
Ga0099796_1019262013300010159Vadose Zone SoilMRLSSAPNVSRGAAVQVRIIICLLFLTMIVVAVLYGLREVADSVDLATCLAIWGAAALVIGIAFTWDGR*
Ga0099796_1053869113300010159Vadose Zone SoilAVQVRIIICLLFLTMIVVAVLYGLRQVADSVDLATCLAIWGAAALVEIGIAFTWKRR*
Ga0137392_1020613943300011269Vadose Zone SoilRRPTIPPGPAMQVRIIVCLLFLTMIVVAVHYGLRQLADSVDLATFLAICGAAVLVEIGIAFTWDRR*
Ga0137463_101866023300011444SoilMRLCSPPNDSRGAAVQVRIIVCLLLLTTIVAAVHYGLRQLADSVDLAIFLAICGAAVLVEIGIAFTWDRR*
Ga0137389_1095021713300012096Vadose Zone SoilLKNEARTDHILFDALIVIGPCAYVRRSTIPPGPAVQVRIIVCLLFLTMIAVAVHYGLRQLADSVDLATFLAICGAAVLVEIGIAFTWDRR*
Ga0137389_1128537813300012096Vadose Zone SoilHLKVFATAELADILFDALIVIGPCAYVRRPTFPAGSAVQVRIIVCLLLLTMVVVVDTVSATPLRQLADGVDLATFFAICGAAVLVEIGISFAWDRR*
Ga0137365_1026878333300012201Vadose Zone SoilLRACGFATAELADIPFDALIVIGPSAYVRRPTIPAGATVQVRIIVCLLFLTMIVVAIHYGLRQLADSMDLATFLAICAAAVLVEIGISLTWDRR*
Ga0137363_1005909243300012202Vadose Zone SoilLIVIGPCVYVRRPTIPAGPAVQIRIIICLLFLTMIVVAVLYGLREVADSVDLATCLAIWGAAALVEIGIAFTWDWR*
Ga0137363_1083807823300012202Vadose Zone SoilMFAAQRFPQGPAVQVRIIVCLLLFTMFVVVDTVSATPLRQLADGVDLATFFAICGAAVLVQIGIAFTWDRP*
Ga0137399_1016971443300012203Vadose Zone SoilHILFDALIVIGPCAYVRRPTFPAGPAVVRIMICLLFLTMIVVAVLYGLRQVADSVDLVTCLAIWGAAALVEIGIAFTWGGDKRAARR*
Ga0137399_1032325843300012203Vadose Zone SoilMFASQRFPWGPAVQVRIIVCLLLFTMFVVVDTVSATPLRQLADGVDLATFFAICGAAVL
Ga0137362_1023441843300012205Vadose Zone SoilLIVIGPYVYVRRPTIPAGPAVQIRIIICLLFLTMIVVAVLYGLREVADSVDLATCLAIWGAAALVEIGIAFTWDRR*
Ga0137362_1096898713300012205Vadose Zone SoilLIVIGPCAYVRRPTIPPGLAVQVRIIVCLLFLTMIAVAVHYGLRQLADSVDLATFLAICGAAVLVEIGIAFTWDRR*
Ga0137362_1124292213300012205Vadose Zone SoilVNEARTGHILFDALIVIGPCAYVRRPTFPAGPAVVRIMICLLFLAMIVVAVLYGLRQVADSVDLVTCLAIWGAAALVEI
Ga0137385_1007163113300012359Vadose Zone SoilVRRPTFPAGPAVQVRIIICLLFLTMIVVAVLYGLRQVTDSVDLVTCLAIWGGAALIEIGIAFTWGGDKRAARR*
Ga0137360_1044702223300012361Vadose Zone SoilGPAVQVRIIVCLLFLTMIVVAVHYGLRQLADSVDLATFLAICGAAVLVEIGIAFTWDRR*
Ga0137360_1109069933300012361Vadose Zone SoilLIVIGPCVYVRRPTIPAGPAVQIRIIICLLFLTMIVVAVLYGLREVADSVDLATCLAIWGAAALVEIGIAFTWEWR*
Ga0137360_1148176513300012361Vadose Zone SoilVNEARTGHILFDVLIVIGPCAYVRRPTFLAGPAVQVRIIVCLLLLTTLVVAVDDGLHPIAHSVDLTTFLAICGAAVLVEIGISFTWDRR*
Ga0137358_1026019733300012582Vadose Zone SoilLIVIGPCAYVRRPTIPAGPAVQVRIIVCLLFLTMIVVAVHYGLRQLADSLDLATFLAICGAAVLVEIGIAFTWDRR*
Ga0137358_1036751813300012582Vadose Zone SoilLFDALIVIGPCAYVRRPTIPAGPAVQVRIIVCLLFLTMIVVAVHYGLRQLADSVDLATFLAICGAAVLVEIGIAFTWDRR*
Ga0137398_1019804943300012683Vadose Zone SoilMFASQRFPWGPAVQVRIIVCLLLFTMFVVVDTVSATPLRQLADGVDLATFFAICGAAVLVEIGIAFTWDRR*
Ga0137398_1058080823300012683Vadose Zone SoilPAGPAVQVRIIICLLFLTMIVVAVLYGLRQVTDSVDLVTCLAIWGAAALIEIGIAFTWGGDKRAARR*
Ga0137398_1100114613300012683Vadose Zone SoilVQVRIIICLLFLTMIVVAVLYGLREVADSVDLATCLAIWGTAVLVEIGITFTWDRR*
Ga0137397_1003598873300012685Vadose Zone SoilMFASQRFPWGPAVQVRIIVCLLLFTMFVVVDTVSATPLRQLADGVDLATFFAICGAAVLVQIGIAFTWDRPHR*
Ga0137397_1020440733300012685Vadose Zone SoilLIVIGPCVYVRRPTIPAGPTVQIRIIICLLFLTMIVVTVLYGLREVADSVDLATIWGAAALVEIGIAFTWDRR*
Ga0137397_1062290013300012685Vadose Zone SoilMFAAQRFPQGPAVQVRIIVCLLLFTMFVVVDTVSATPLRQFADGVDLATFFAICGAAVLVEIGIALTWDWR*
Ga0137395_1039507523300012917Vadose Zone SoilLIVIGPCVYVRRPTIPAGPAVQIRIIICLLFLTMIVVAVLYGLRQVADSVDLATCLAIWGAAALVEIGIAFTWDRR*
Ga0137396_1072795523300012918Vadose Zone SoilQIRIIICLLFLTMIVVAVLYGLRQVADSVDLATCLAIWGAAALVEIGIAFTWKRR*
Ga0137394_1105704313300012922Vadose Zone SoilPAGPAVQVRIIVCLLLLTMIVVAVLYGLRQLADSVDLATFLAIWGAAVLVEIGIAFAWDDRR*
Ga0137413_1007965133300012924Vadose Zone SoilMFAAQRFPRGPAVQVRIIVCLLLFTMFVVVDTVSVTPLRQLVDGVDLATFLAICGAAVLVQIGIAFTWDLPHR*
Ga0137413_1061029513300012924Vadose Zone SoilLIVIGPCAYVRRPTIPAGPAVQVRIIVCLLFLTMIVAVHYGLRQLADSVDLATFLAICGAAVLVEIGIAFTWDRR*
Ga0137419_1002777123300012925Vadose Zone SoilVFATAELADILFDALIVIGPCAYVRRLTFPAGPAVQVRIIVCLLLLTMVVVVDTVSATPLRQLADGVDLATFFAICGAAVLVEIGITFTWDRQ*
Ga0137419_1101780613300012925Vadose Zone SoilYVRRPTIPAGPAVQVRIIVCLLFLTMIVVAVHYGLRQLADSLDLATFLAICGAAVLVEIGIAFTWDRR*
Ga0137419_1111021213300012925Vadose Zone SoilGPAVQVRIIVCLLFLTMIVVAVLYGLRAVADSVDLATCLAIWGAAALVEIGIAFTWEDRR
Ga0137404_1008427223300012929Vadose Zone SoilMFAAQRFPRGPAVQVRIIVCLLLLTMIVVAVLCGLRQLADSVDLATFLAIWGAAAFVQIGIAFTWDRR*
Ga0137404_1039435433300012929Vadose Zone SoilPTIPAGPAVQVRIIVCLLFLTMIVVAVDDGLHPIAHSVDLTTFLAICGAAVLVEIGISFTWDRR*
Ga0137404_1067343133300012929Vadose Zone SoilFPAGSAVQVRIIVCLLLLTMVVVVDTVSATPLRQLADGVDLATFFAICGAAVLVEIGITFTWDRQ*
Ga0137407_10003428103300012930Vadose Zone SoilFPRGPAVQVRIIVCLLLLTMIVVAVLCGLRQLADSVDLATFLAIWGAAAFVQIGIAFTWDRR*
Ga0137410_1062751413300012944Vadose Zone SoilRIIVCLLLLTTLVVAVDDGLHPIAHSVDLTTFLAICGAAVLVEIGIAFAWDRR*
Ga0137410_1097109813300012944Vadose Zone SoilLMFASQRFPWGPAVQVRIIVCLLLSTMFVVVDTVSATPLRQFADGVDLATFFAICGAAVLVEIGIALTWDWR*
Ga0137410_1186125323300012944Vadose Zone SoilMRLCSPPNVSRGAAVQVRIIICLLFLTMIVVAVLYGLRQVADSVDLATCLAIWGAAALVEIGIAFTWKRR*
Ga0137405_113161713300015053Vadose Zone SoilHAPMFAAQRFPRGPAVQVRIIVCLLLLTMIVVAVLCGLRQLADSVDLATFLAIWGAAAFVQIGIAFTWDRR*
Ga0137405_118989923300015053Vadose Zone SoilLIVIGPCVYVRRPTIPAGPAVQIQIICLLFLTMIVVAVLYGLREVADSVDLATSLAIWGAAALVEIGIAFTWDRR*
Ga0137420_131269173300015054Vadose Zone SoilVDLCRYQQGSWRPRSPQAFATAELADILFDALIVIGPCAYVRRPTSPAGPAVQIRIIICLLFLTMIVVAVLYGLRQVADSVDLATCLAIWGAAALVEIGIAFTWDRR*
Ga0137418_10025781123300015241Vadose Zone SoilRIIICLLFLTMIVVAVLYGLRQVADSVDLATCLAIWGAAALVEIGIAFTWDRR*
Ga0137403_1022182623300015264Vadose Zone SoilLIVIGPCVYVRRPTIPAGPAVQIRIIICLLFLTMIVVAVLYGLREVADSVDLATCLAIWGAAALVEIGIAFTWDRR*
Ga0184604_1000728633300018000Groundwater SedimentMFAAQRFPQGPAVQVRIIVCLLLFTMFVVVDTVSATPLRQLDDGVDLATFLAICGAAVLAEIGIAFAWSRR
Ga0184605_1046380013300018027Groundwater SedimentTFPAGPAVQVRIIVCLLLLTMIVVAVHYGVRQLADSADLATFLAICGAAVLVEIGIGFTWDRR
Ga0184608_1000580153300018028Groundwater SedimentMFRVITIPAGPAVQVRIIVCLLLLTTLVVAVHYGLRQLADSADLATFLAICGAAVLVEIGLKVKAR
Ga0184617_101301843300018066Groundwater SedimentAVQIRIIICLLFLTMIVVAVLYGLREVADSVDLATCLAIWGAAALVEIGIAFTWEDGR
Ga0137408_127435913300019789Vadose Zone SoilVFATAELADILFDALIVIGPCAYVHRPTFPAGSAVQVRIIVCLLLLTMVVVVDTVSATPLRQLADGVDLATFFAICGAAVLVEIGITFTWDRQ
Ga0193705_101847233300019869SoilMFRVITFPAGPAVQVRIIVCLLLLTTIVVAVHYGLRQLAHSVDLATFLAICGAAVLVEIGLKVKAR
Ga0193744_102425133300019874SoilCAYVRRPTLPAGPAVQVRIIVCLLLLTMIVVAVHYGVRQLADSVDLATFFAICGAAVLVEIGIGLTWDRR
Ga0193744_106563513300019874SoilDHILFVALIVIGPCAYVRRPTIPAGPAVQIRIIVCLLLLTTLVVAVDDGLHPIAHSVDLTTFLAICGAAVLVEIGIAFAWDRR
Ga0193722_114588113300019877SoilIYVDANKEVGDVDHLKVLATAELADIFDALIVIGPCAYVRRPTFPAGSAVQVRIIVCLLLLTMVVVVDTVSATPLRQLADGVDLATFFAICGAAVLVEIGISFAWDRR
Ga0193715_109839623300019878SoilVIGPCAYVRRPTFPAGPAVQVRIIVCLLLLTMIVVAVHYGVRQLADSADLATFLAICGAAVLVEIGIGFTWDRR
Ga0193723_104637623300019879SoilVQVRIIVCLLLLTMVVVVDTVSATPLRQLADGVDLATFFAICGAAVLVEIGITFTWDRR
Ga0193707_101242813300019881SoilVQIRIIVCLLLLTTLVVAVDDGLHPIAHSVDLTTFLAICGAAVLVEIGIAFAWDRR
Ga0193713_108344513300019882SoilMRLCSPPNVSRGAAVQVRIIICLLFLTMIVVAVLYGLRQVADSVDLATCLAIWGAAALVEIGIAFTWKRR
Ga0193713_114096023300019882SoilFPAGPVVQVRIIVCLLLLTMVVVVDTVSATPLRQLADGVDLATFFAICGAAVLVEIGISFAWDRR
Ga0193747_106048213300019885SoilMFAAQRFPRGRLCKFESSVCVLLLTMIVVAVLYGLRQLADSVDLATFLAIWGAAVLVEIGMAFTRRARTVFCE
Ga0193727_1000324123300019886SoilMFRVITIPAGPAVQVRIIVCLLLLTTLVVAVHYGLRQLADSADIATFLAICGAAVLVEIGLKVKAR
Ga0193727_1000600143300019886SoilMFRVITFPAGPAVQVRIIVCLLLLTVVAVLYGLRLLADSVDLATFLAIWGAAVLVEIGIAFTWDRR
Ga0193727_1002762113300019886SoilVFATAELADILFDALIVIGPCAYVRRPTFPAGPVVQVRIIVCLLLLTMVVVVDTVSATPLRQLADGVDLATFFAICGAAVLVEIGISFAWDRR
Ga0193727_1005779113300019886SoilMFRVTTIPAGPAVQIRIIVCLLLLTTLVVAVDDGLHPIAHSVDLATFLAICGAAVLVEIGIAFAWDRR
Ga0193718_104763513300019999SoilPAVQVRIIVCLLLLTMIVVAVHYGVRQLADSVDLATFFAICGAAVLVEIGIGLTWDRR
Ga0193718_108558833300019999SoilVFATAELADILFDALIVIGPCAYVRRPTFPAGPVVQVRIIVCLLLLTMVVVVDTVSATPLRQLADGVDLATFFAICGAAVLVEIGISFAWDR
Ga0193731_1001346123300020001SoilMFRVTTIPAGPAVQIRIIVCLLLLTTLVVAVDDGLHPIAHSVDLTTFLAICGAAVLVEIGIAFAWDRR
Ga0193730_100246643300020002SoilLIVIGPCAYVRRPTFPAGPAVQVRIIVCLLLLTMIVVAVHYGVRQLADSADLATFLAICGAAVLVEIGIGFTWDRR
Ga0193730_114071423300020002SoilGPAVQVRIIVCLLLLTMIVVAVHYGVRQLADSVDLATFFAICGAAVLVEIGIGLTWDRR
Ga0193755_102095233300020004SoilVLATAELADIFDALIVIGPCAYVRRPTFPAGSAVQVRIIVCLLLLTMVVVVDTVSATPLRQLADGVDLATFFAICGAAVLVEIGITFTWDRR
Ga0193755_123034113300020004SoilNEGRTDHILFDALIVIGPCAYVRRPTIPAGPAVQVRIIVCLLFLTMIVVAVHYGLRQLADSVDVATFLAICGAAVLVEIGIAFTWDRR
Ga0193732_100954813300020012SoilMFRVTTIPAGPAVQIRIIVCLLLLTTLVVAVDDGLHPIAHSVDLATFLAICGAAVLVEIGIAFAWD
Ga0193745_101989843300020059SoilRRPTLPAGPAVQVRIIVCLLLLTMIVVAVHYGVRQLADSVDLATFFAICGAAVLVEIGIGLTWDRR
Ga0193745_113293113300020059SoilVIGPCAYVRRPTLPAGPAVQVRIIVCLLLLTMIVVAVHYGVRQLADSADLATFLAICGAAVLVEIGIGFTWDRR
Ga0193724_100661073300020062SoilMRLCSPPNVSRGAAVQVRIIICLLFLTMIVVAVLYGLRQVADSVDLATCLAIWGAAALVEIGIAFTWK
Ga0193724_103402413300020062SoilMFAAQRFPRGPAVQVRIIVCLILFTMFVVVDTVSATPLRQLADGVDLATFFAICGAAVLVQIGIAFTWDRR
Ga0179592_1000328443300020199Vadose Zone SoilMFASQRFPWGPAVQVRIIVCLLLFTMFVVVDTVSATPLRQLADGVDLATFFAICGAAVLVQIGIAFTWDRPHR
Ga0222622_1073341813300022756Groundwater SedimentMFRVITIPAGPAVQVRIIVCLLLLTTLVVAVYYGLRQLADSVDLATFLAICGAAVLVEIGLQVKAR
Ga0222622_1081285913300022756Groundwater SedimentMFAAQRFPQGPAVQVRIIVCLLLFTMFVVVDTVSATPLRQLADGVDLATF
Ga0137417_124348623300024330Vadose Zone SoilLIVIGPCAYVRRPTIPAGPAVQVRIIVCLLFLTMIVVAVHYGLRQLADSVDLATFLAICGAAVLVEIGIAFTWDRR
Ga0257151_100150063300026341SoilLIVIGPCVYVRRPTIPAGPAVQIRIIICLLFLTMIVVTVLYGLREVADSVDLATIWGAAALVEIGIAFTWDRR
Ga0257149_100253453300026355SoilPTIPAGPAVQIRIIICLLFLTMIVVTVLYGLREVADSVDLATIWGAAALVEIGIAFTWDR
Ga0257166_101579413300026358SoilMRLCSPPNVSRGAAVQVRIIICLLFLTMIVVAVLYGLREVADSVNLVTCLAIWGAAALVEIGIAFTWGGDKRAARR
Ga0257176_106529013300026361SoilPCAYVRRPTIPPGPAVQVRIIVCLLFLTMIVAVHYGLRQLADSVDLATFLAICGAAVLVEIGIAFTWDRR
Ga0257176_106733423300026361SoilMRLCSPPNVSRRAAVQVRIIICLLFLTMIVVAVLYGLREVADSMDLATCLAIWGAAALVEIGIAFTWDRR
Ga0257146_100197043300026374SoilMRLSSPPNVSRRAAVQVRIIICLLFLTMIVVAVLYGLRQVADSVNLVTCLAIWGAAALVEIGIAFTWGGDKRAARR
Ga0257171_102709713300026377SoilAAVQVRIIICLLFLTMIVVAVLYGLREVADSVNLVTCLAIWGAAALVEIGIAFTWGGDKRAARR
Ga0257178_103922613300026446SoilVIGPCAYVRRPTIPPGPAVQVRIIVCLLFLTMIVAVHYGLRQLADSVDLATFLAICGAAVLVEIGIAFTWDRR
Ga0257153_102263933300026490SoilVQVRIIICLLFLTMIVVAVLYGLREVADSVDLVTCLAIWGAAALVEIGIAFTWGGDKRAARR
Ga0257159_101160123300026494SoilLIVIGPCVYVRRPTIPAGPAVQIRIIICLLFLTMIVVTVLYGLREVADSVDLATCLAIWGAAALVEIGIAFTWDRR
Ga0257157_100175873300026496SoilLIVIGPCAYVRRPTIPAGPVVQVRIIVCLLFLTMIVVAVHYGLRQLADSVDLATFLAICGAAVLVEIGIAFTWDRR
Ga0257157_100808123300026496SoilVQIRIIICLLFLTMIVVTVLYGLREVADSVDLATIWGAAALVEIGIAFTWDRR
Ga0257164_105217823300026497SoilMRLCSPPNVSRRAAVQVRIIICLLFLTMIVVAVLYGLREVADSVDLVTCLAIWGAAALVEIGIAFTWGGDKRA
Ga0257156_109465513300026498SoilMRLSSPPNVSRRAAVQVRIIICLLFLTMIVVAVLYGLREVADSVNLVTCLAIWGAAALVEIGIAFTWGGDKRAARR
Ga0209648_1050168423300026551Grasslands SoilMRLCSPPNVSRGAAVQVRIIICLLFLTMIVVAVLYGLRQVADSVDLATFLAICGAAVLVEIGIAFTWDRR
Ga0208983_100511733300027381Forest SoilVQVRIIICLLFLTMIVVAVLYGLREVADSVDLATCLAVWGAAALVEIGIAFTWDER
Ga0209179_107423513300027512Vadose Zone SoilVRIIVCLLFLTMIVVAVHYGLRQLADSVDLATFLAICGAAVLVEIGIAFTWDRR
Ga0209179_112553813300027512Vadose Zone SoilMFASQRFPWGPAVQVRIIVCLLLFTMFVVVDTVSATPLRQLADGVDLATFFAIRGAAVLV
Ga0209106_100548123300027616Forest SoilMFAGQRFPRGPAVQVRIIICLLFLTMIVVAVLYGLREVVDSMDLATCLAIWGAAALVEIGIAFTWEDGR
Ga0209076_106475123300027643Vadose Zone SoilMRLCSPPNVSRGAAVQVRIIICLLFLTMIVVAVLYGLRQVADSVDLATCLAIWGAAALVEIGIAFTWD
Ga0209588_100191133300027671Vadose Zone SoilVQVRIIVCLILFTMFVVVDTVSATPLRQLADGVDLATFFAICGAAVLVQIGIAFTWDRP
Ga0209588_107540313300027671Vadose Zone SoilVDLCRYQQGSWRPRSPQAFATAELADILFDALIVIGPCAYVRRPTSPAGPAVQIRIIICLLFLTMIVVAVLYGLRQVADSVDLATCLAIWGAAALVEIGIAFTWDRR
Ga0209588_108741713300027671Vadose Zone SoilLKNEVRSDHILFDALIVIGPCAYVRRPTIPAGPAVQVRIIICLLFLTMIVVAVLYGLRQVADSVDLATC
Ga0208989_1013530543300027738Forest SoilMRLCSPPNVSRRAAVQVRIIICLLFLTMIVVAVLYGLREVVDSMDLATCLAIWGAAALVEIGIAFTWEDRR
Ga0209180_1004962733300027846Vadose Zone SoilLKNEARTDHILFDALIVIGPCAYVRRPTIPPGPAMQVRIIVCLLFLTMVVVAVHYGLRQLADSVDLATFLAICGAAVLVEIGIAFTWDRR
Ga0209068_1038330533300027894WatershedsVIGPCAYVRRPTIPAGPAVQVRIIVCLLLLTTIVVAVHYGLRQLAHSVDLATFLAICGAAVLVEIGIAFTW
Ga0209488_1019833913300027903Vadose Zone SoilPRGPAVQVRIIICLLFLTMIVVAVLYGLREVVDSMDLATCLAIWGAAALVEIGIAFTWEDGR
Ga0209488_1021944223300027903Vadose Zone SoilMRLCSPPNVSRGAAVQVRIIICLLFLTMIVVAVLYGLRQVADSVDLATCLAIWGAAALVEIGIAFTWDRR
Ga0209488_1023381443300027903Vadose Zone SoilMFASQRFPWGPAVQVRIIVCLLLFTMFVVVDTVSATPLRQLADGVDLATFFAICGAAVLV
Ga0209488_1025645513300027903Vadose Zone SoilVSRRAAVQVRIIICLLFLTMIVVAVLYGLREVADSVDLATCLAIWGTAVLVEIGITFTWDRR
Ga0209488_1029268713300027903Vadose Zone SoilMFAAQRFPRGPAVQVRIIVCLLLFTMFVVVDTVSVTPLRQLVDGVDLATFLAICGAAVLVQIGIAFTWDLPHR
Ga0209583_1003041313300027910WatershedsVQVRIIVCLLLLTTIVVAVHYGLRQLADGVDLAIFLAICGAAVLVEIGIGFTW
Ga0137415_1003921723300028536Vadose Zone SoilMFAAQRFPRGRPCKFESSVCALLLTMIVVAVLYGLRQLADSVDLATFLAIWGAAVLVEIGMAFTRRARTVFCEGGS
Ga0307282_1029594523300028784SoilMFRVITIPAGPAVQVRIIVCLLLLTTLVVAVYYGLRQLADSVDLATFLAICGAAVLVEIGLKVKAR
Ga0307290_1036223723300028791SoilVPSRARTDHTPFDALIVIGPCAYVRRPTIPAGPAVQVRIIVCLLLLTMIVVAVHYGVRQLADSVDLATFLAICGAAVLVEIGLKVKAR
Ga0307296_1016446643300028819SoilRVITIPAGPAVQVRIIVCLLLLTTLVVAVYYGLRQLADSVDLATFLAICGAAVLVEIGLKVKAR
Ga0307310_1072679413300028824SoilHAPMFRVITIPAGPAVQVRIIVCLLLLTTLVVAVYYGLRQLADSVDLATFLAICGAAVLVEIGLKVKAR
Ga0307278_1055380113300028878SoilMSILLMPKGLGDVDHLKVFATAELADILFDALIVIGPCAYVRRPTFPAGPAVQVRIIVCLLLLTMVVVVDTVSATPLRQFADGVDLATFFAICGAAVLVEIGITFTWDRR

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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