NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F058266

Metagenome Family F058266

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F058266
Family Type Metagenome
Number of Sequences 135
Average Sequence Length 109 residues
Representative Sequence MKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD
Number of Associated Samples 118
Number of Associated Scaffolds 135

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 35.34 %
% of genes near scaffold ends (potentially truncated) 45.19 %
% of genes from short scaffolds (< 2000 bps) 74.07 %
Associated GOLD sequencing projects 105
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (63.704 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(13.333 % of family members)
Environment Ontology (ENVO) Unclassified
(29.630 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(51.111 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 58.18%    β-sheet: 0.00%    Coil/Unstructured: 41.82%
Feature Viewer
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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 135 Family Scaffolds
PF07369DUF1488 11.11
PF00248Aldo_ket_red 3.70
PF03401TctC 2.96
PF12071DUF3551 2.96
PF13193AMP-binding_C 2.96
PF12399BCA_ABC_TP_C 2.22
PF08241Methyltransf_11 2.22
PF00795CN_hydrolase 1.48
PF06684AA_synth 1.48
PF00005ABC_tran 1.48
PF13531SBP_bac_11 1.48
PF00032Cytochrom_B_C 1.48
PF13458Peripla_BP_6 0.74
PF04392ABC_sub_bind 0.74
PF00903Glyoxalase 0.74
PF01546Peptidase_M20 0.74
PF00975Thioesterase 0.74
PF04290DctQ 0.74
PF13361UvrD_C 0.74
PF08402TOBE_2 0.74
PF13649Methyltransf_25 0.74
PF02518HATPase_c 0.74
PF13343SBP_bac_6 0.74

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 135 Family Scaffolds
COG3181Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctCEnergy production and conversion [C] 2.96
COG1290Cytochrome b subunit of the bc complexEnergy production and conversion [C] 1.48
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.74

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms63.70 %
UnclassifiedrootN/A36.30 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2162886012|MBSR1b_contig_10248481All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300000041|ARcpr5oldR_c000399All Organisms → cellular organisms → Bacteria5995Open in IMG/M
3300000787|JGI11643J11755_11728287Not Available824Open in IMG/M
3300000890|JGI11643J12802_12180002Not Available512Open in IMG/M
3300000953|JGI11615J12901_10286410Not Available1310Open in IMG/M
3300000953|JGI11615J12901_11134674All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.614Open in IMG/M
3300002128|JGI24036J26619_10007414All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.1950Open in IMG/M
3300003349|JGI26129J50193_1005405All Organisms → cellular organisms → Bacteria911Open in IMG/M
3300004156|Ga0062589_100261462All Organisms → cellular organisms → Bacteria1306Open in IMG/M
3300004157|Ga0062590_100304344All Organisms → cellular organisms → Bacteria1243Open in IMG/M
3300004157|Ga0062590_102164201Not Available581Open in IMG/M
3300004157|Ga0062590_102379485All Organisms → cellular organisms → Bacteria → Proteobacteria559Open in IMG/M
3300004463|Ga0063356_105563609All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. PAMC 26621541Open in IMG/M
3300004479|Ga0062595_100068821All Organisms → cellular organisms → Bacteria1727Open in IMG/M
3300004479|Ga0062595_100657261All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300004480|Ga0062592_100971912All Organisms → cellular organisms → Bacteria → Proteobacteria773Open in IMG/M
3300005093|Ga0062594_100001499All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD00695519Open in IMG/M
3300005276|Ga0065717_1005689All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.854Open in IMG/M
3300005290|Ga0065712_10009493Not Available2618Open in IMG/M
3300005290|Ga0065712_10175196Not Available1197Open in IMG/M
3300005293|Ga0065715_10183274All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.1462Open in IMG/M
3300005294|Ga0065705_10326365Not Available1000Open in IMG/M
3300005330|Ga0070690_100383935All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.1027Open in IMG/M
3300005332|Ga0066388_100451631All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Paenibacillaceae → Paenibacillus → unclassified Paenibacillus → Paenibacillus sp. P221927Open in IMG/M
3300005336|Ga0070680_100193446All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.1714Open in IMG/M
3300005340|Ga0070689_100136381All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.1971Open in IMG/M
3300005345|Ga0070692_10159659All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.1290Open in IMG/M
3300005345|Ga0070692_10595745Not Available730Open in IMG/M
3300005347|Ga0070668_100818092All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.828Open in IMG/M
3300005366|Ga0070659_101936719Not Available529Open in IMG/M
3300005441|Ga0070700_100103448All Organisms → cellular organisms → Bacteria → Proteobacteria1880Open in IMG/M
3300005458|Ga0070681_10001550All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales20354Open in IMG/M
3300005518|Ga0070699_100391283All Organisms → cellular organisms → Bacteria1256Open in IMG/M
3300005549|Ga0070704_101679453All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.586Open in IMG/M
3300005614|Ga0068856_101558063Not Available674Open in IMG/M
3300005841|Ga0068863_101415328Not Available703Open in IMG/M
3300005843|Ga0068860_100069156All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3355Open in IMG/M
3300005843|Ga0068860_101675383All Organisms → cellular organisms → Bacteria658Open in IMG/M
3300005843|Ga0068860_102347566Not Available554Open in IMG/M
3300005844|Ga0068862_101103406All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.789Open in IMG/M
3300006058|Ga0075432_10033684All Organisms → cellular organisms → Bacteria → Proteobacteria1778Open in IMG/M
3300006196|Ga0075422_10144738All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.945Open in IMG/M
3300006804|Ga0079221_11434716Not Available551Open in IMG/M
3300006852|Ga0075433_10662122Not Available915Open in IMG/M
3300006954|Ga0079219_10416489All Organisms → cellular organisms → Bacteria899Open in IMG/M
3300006954|Ga0079219_11370397All Organisms → cellular organisms → Bacteria629Open in IMG/M
3300009011|Ga0105251_10025362All Organisms → cellular organisms → Bacteria → Proteobacteria3034Open in IMG/M
3300009092|Ga0105250_10427227Not Available591Open in IMG/M
3300009101|Ga0105247_10576300All Organisms → cellular organisms → Bacteria831Open in IMG/M
3300009162|Ga0075423_10126303All Organisms → cellular organisms → Bacteria2683Open in IMG/M
3300009553|Ga0105249_12156201Not Available630Open in IMG/M
3300009553|Ga0105249_13300063Not Available519Open in IMG/M
3300010371|Ga0134125_11014480All Organisms → cellular organisms → Bacteria910Open in IMG/M
3300010373|Ga0134128_10022835All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root14627395Open in IMG/M
3300010375|Ga0105239_10254341All Organisms → cellular organisms → Bacteria1973Open in IMG/M
3300010399|Ga0134127_10266173All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1633Open in IMG/M
3300010399|Ga0134127_10936204All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.923Open in IMG/M
3300012479|Ga0157348_1015404Not Available597Open in IMG/M
3300012489|Ga0157349_1026458Not Available581Open in IMG/M
3300012491|Ga0157329_1026385Not Available579Open in IMG/M
3300012507|Ga0157342_1014501All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.854Open in IMG/M
3300012515|Ga0157338_1018174Not Available794Open in IMG/M
3300012885|Ga0157287_1076622Not Available579Open in IMG/M
3300012893|Ga0157284_10035574All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.1064Open in IMG/M
3300012895|Ga0157309_10000735All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5433Open in IMG/M
3300012896|Ga0157303_10224891Not Available557Open in IMG/M
3300012898|Ga0157293_10002282All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2299Open in IMG/M
3300012903|Ga0157289_10183345All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.671Open in IMG/M
3300012906|Ga0157295_10210581All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.626Open in IMG/M
3300012906|Ga0157295_10291044Not Available566Open in IMG/M
3300012909|Ga0157290_10014565All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1604Open in IMG/M
3300012913|Ga0157298_10018074All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.1293Open in IMG/M
3300012958|Ga0164299_10012316All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3242Open in IMG/M
3300012985|Ga0164308_10515453All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.1003Open in IMG/M
3300012989|Ga0164305_10002749All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei7530Open in IMG/M
3300013096|Ga0157307_1007902Not Available1602Open in IMG/M
3300013096|Ga0157307_1008618All Organisms → cellular organisms → Bacteria → Proteobacteria1548Open in IMG/M
3300013307|Ga0157372_12405354Not Available605Open in IMG/M
3300013307|Ga0157372_13397766Not Available506Open in IMG/M
3300014325|Ga0163163_10006815All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales10018Open in IMG/M
3300014326|Ga0157380_10000309All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae29456Open in IMG/M
3300014968|Ga0157379_10706045All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300015077|Ga0173483_10014852All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Rhizobiaceae → Rhizobium/Agrobacterium group → Rhizobium → Rhizobium etli → Rhizobium etli CNPAF5122692Open in IMG/M
3300015371|Ga0132258_10861378All Organisms → cellular organisms → Bacteria2287Open in IMG/M
3300015373|Ga0132257_100323124All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1859Open in IMG/M
3300015374|Ga0132255_100206298All Organisms → cellular organisms → Bacteria2782Open in IMG/M
3300015374|Ga0132255_102895164Not Available733Open in IMG/M
3300019356|Ga0173481_10004173All Organisms → cellular organisms → Bacteria3776Open in IMG/M
3300022883|Ga0247786_1083018All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.679Open in IMG/M
3300022889|Ga0247785_1031590All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.622Open in IMG/M
3300022892|Ga0247753_1000147All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales6422Open in IMG/M
3300023064|Ga0247801_1000346All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae6100Open in IMG/M
3300023066|Ga0247793_1000159All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia12631Open in IMG/M
3300023069|Ga0247751_1000469All Organisms → cellular organisms → Bacteria4008Open in IMG/M
3300024055|Ga0247794_10001790All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4220Open in IMG/M
3300025271|Ga0207666_1003385All Organisms → cellular organisms → Bacteria → Proteobacteria1958Open in IMG/M
3300025290|Ga0207673_1010196All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.1206Open in IMG/M
3300025900|Ga0207710_10015359All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3234Open in IMG/M
3300025911|Ga0207654_10001079All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia14831Open in IMG/M
3300025932|Ga0207690_11238501Not Available623Open in IMG/M
3300025936|Ga0207670_11061243All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → Pseudolabrys taiwanensis683Open in IMG/M
3300025941|Ga0207711_10007447All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei9159Open in IMG/M
3300025949|Ga0207667_10904227All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Pseudorhodoplanes → unclassified Pseudorhodoplanes → Pseudorhodoplanes sp.874Open in IMG/M
3300025981|Ga0207640_11015129Not Available730Open in IMG/M
3300026067|Ga0207678_10181097All Organisms → cellular organisms → Bacteria → Proteobacteria1799Open in IMG/M
3300026075|Ga0207708_10137719All Organisms → cellular organisms → Bacteria → Proteobacteria1913Open in IMG/M
3300026078|Ga0207702_11835786Not Available598Open in IMG/M
3300026121|Ga0207683_10679900Not Available954Open in IMG/M
3300026769|Ga0207492_102951All Organisms → cellular organisms → Bacteria561Open in IMG/M
3300026812|Ga0207518_103009Not Available597Open in IMG/M
3300026903|Ga0207462_1001180Not Available1002Open in IMG/M
3300026933|Ga0207578_1011507Not Available647Open in IMG/M
3300027364|Ga0209967_1059150Not Available593Open in IMG/M
3300027430|Ga0207561_101533Not Available754Open in IMG/M
3300027449|Ga0207531_100402Not Available590Open in IMG/M
3300027453|Ga0207624_106884Not Available641Open in IMG/M
3300027614|Ga0209970_1076394All Organisms → cellular organisms → Bacteria → Proteobacteria626Open in IMG/M
3300027765|Ga0209073_10349830Not Available596Open in IMG/M
3300027775|Ga0209177_10130527All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens832Open in IMG/M
3300027866|Ga0209813_10069038Not Available1145Open in IMG/M
3300027876|Ga0209974_10166949Not Available801Open in IMG/M
3300027907|Ga0207428_10114288All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2075Open in IMG/M
3300028889|Ga0247827_10291017Not Available949Open in IMG/M
(restricted) 3300031150|Ga0255311_1057825Not Available820Open in IMG/M
(restricted) 3300031197|Ga0255310_10006416All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3036Open in IMG/M
(restricted) 3300031197|Ga0255310_10191047Not Available571Open in IMG/M
3300031716|Ga0310813_10002343All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales11472Open in IMG/M
3300031943|Ga0310885_10008035All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3507Open in IMG/M
3300032017|Ga0310899_10314150Not Available730Open in IMG/M
3300032179|Ga0310889_10150390Not Available1041Open in IMG/M
3300032211|Ga0310896_10002477All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales4950Open in IMG/M
3300034818|Ga0373950_0000452All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales5045Open in IMG/M
3300034819|Ga0373958_0001507All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3133Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.33%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil12.59%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil5.19%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere5.19%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.44%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere4.44%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil3.70%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.70%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.70%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere3.70%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.70%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.22%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil2.22%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere2.22%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere2.22%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.96%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere2.96%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.96%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil1.48%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.48%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.48%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.48%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.48%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil1.48%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.74%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.74%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.74%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil0.74%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.74%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.74%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.74%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.74%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.74%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
2162886012Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300000041Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphereHost-AssociatedOpen in IMG/M
3300000787Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300002128Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5EnvironmentalOpen in IMG/M
3300003349Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PMHost-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005276Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Mutant cpr5Host-AssociatedOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006058Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1Host-AssociatedOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006804Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300012479Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.yng.030610EnvironmentalOpen in IMG/M
3300012489Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610EnvironmentalOpen in IMG/M
3300012491Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.8.old.040610Host-AssociatedOpen in IMG/M
3300012507Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.7.yng.070610Host-AssociatedOpen in IMG/M
3300012515Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.7.yng.070610Host-AssociatedOpen in IMG/M
3300012885Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1EnvironmentalOpen in IMG/M
3300012893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1EnvironmentalOpen in IMG/M
3300012895Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2EnvironmentalOpen in IMG/M
3300012896Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2EnvironmentalOpen in IMG/M
3300012898Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1EnvironmentalOpen in IMG/M
3300012903Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1EnvironmentalOpen in IMG/M
3300012906Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1EnvironmentalOpen in IMG/M
3300012909Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300022883Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S066-202C-4EnvironmentalOpen in IMG/M
3300022889Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S096-311B-4EnvironmentalOpen in IMG/M
3300022892Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5EnvironmentalOpen in IMG/M
3300023064Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6EnvironmentalOpen in IMG/M
3300023066Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6EnvironmentalOpen in IMG/M
3300023069Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5EnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300025271Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025290Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5Host-AssociatedOpen in IMG/M
3300025900Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025932Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025949Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026075Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026769Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1w-11 (SPAdes)EnvironmentalOpen in IMG/M
3300026812Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10A3-10 (SPAdes)EnvironmentalOpen in IMG/M
3300026903Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G01A1-11 (SPAdes)EnvironmentalOpen in IMG/M
3300026933Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10K4-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027364Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027430Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G05A1-10 (SPAdes)EnvironmentalOpen in IMG/M
3300027449Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G10K5-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027453Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-ROWE15-D (SPAdes)EnvironmentalOpen in IMG/M
3300027614Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co S AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027765Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100 (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027866Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300031150 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH4_T0_E4EnvironmentalOpen in IMG/M
3300031197 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH1_T0_E1EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031943Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300034818Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_3Host-AssociatedOpen in IMG/M
3300034819Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
MBSR1b_0701.000035502162886012Miscanthus RhizosphereMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD
ARcpr5oldR_00039993300000041Arabidopsis RhizosphereMKHDTLLIVFVTLYLMVIAALLIKDAPRPVAIEDKAPVAEVEKAPIVKEAASPRADDSSKPGSAPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
JGI11643J11755_1172828723300000787SoilMTTLFFKLANAGRGALERTVAMNHDRFLVVFVVLYLLVIAALLIKDAPRPVAPEDKTPVAKVETAPIAQEEKPDAARSQVDDGGKPGATPNCEKELRRTADLLRFFANRIQGGENTQSVVADMRQQEKKISAVCD*
JGI11643J12802_1218000213300000890SoilMTALFFKLANAGRGALERIVAMNHDRFLVVFVVLYLLVIAALLIKDAPRPVAPEDKTPVAKVETAPIAQEEKPDAARSQVDDGGKPGATPNCEKELRRTADLLRFFANRIQGGENTQSVVADMRQQEKKISAVCD*
JGI11615J12901_1028641013300000953SoilMIERMRSALKDRLSAMPLNVAVMGHETLFFALYLMVIAALLIKDAPRPVATEDKAAVAAVEKAPIAKDEKASPAVPQADDSSKRSETPSCEKELRRTADLLRFFANRIQGGEDPQSVVADMRQQEKKISAVCD*
JGI11615J12901_1113467413300000953SoilFTLYLMVIAALLIKDAPRPVALEEKAPVAEVEKAPIAKEAASPRADDNSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
JGI24036J26619_1000741433300002128Corn, Switchgrass And Miscanthus RhizosphereMKNDTLXIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
JGI26129J50193_100540523300003349Arabidopsis Thaliana RhizosphereMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD*
Ga0062593_10283093013300004114SoilAAWNNISTRSEAIALPKGGTPRNNDEPSVRIVAMNHDRLLVVFVALYLLVIAALLIKDAPRPAAPEDKTPIAKVETAPIAQEDRSDAPRSQADDSGKPGATPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKISAVCD*
Ga0062589_10026146243300004156SoilGALARTVAMKPDRLLGVFVALYLVVIAILLIKDAPRPAAPENKTPVAKVETAPTAQEEKSEVARPQADDSGKPGATPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKIAAVCD*
Ga0062589_10101069323300004156SoilAPRPAAPEDKTPIAKVETAPIAQDDKPDAARSQADDSGKPGATPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKISAVCD*
Ga0062590_10030434413300004157SoilMTTLFFKEATAGRGALARTVAMKPDRLLGVFVALYLVVIAILLIKDAPRPAAPENKTPVAKVETAPTAQEEKSEVARPQADDSGKPGATPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKIAAVCD*
Ga0062590_10216420123300004157SoilMIRAGRGVGIRDYNVLAMRHDTLFFALYLMVIVALLIKDAPRPVATEDKAAVAAAEKAPIIKNEKASPAVPQADDSSKRSETQSCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKISAVCD*
Ga0062590_10237948523300004157SoilMNNDRLLVVFVVLYLIVIAALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPAAASPQADDGGKPGATPNCEKELRRTADLLRFFANRIQAGEDTQSVVADMRQQEKKISAACG*
Ga0063356_10556360913300004463Arabidopsis Thaliana RhizosphereMIERMRSALKDRLSAIPLNVAAMGHETLFFALYLMVIAALLIKDAPRPVATEDKAAVAAVEKAPIAKDEKASPAVPQADDSSKRSETPSCEKELRRTADLLRFFANRIQGGEDPQSVVADMRQQEKKISAVCD*
Ga0062595_10006882143300004479SoilALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD*
Ga0062595_10065726113300004479SoilMKPDRLLVAFVAVYLVVIAILLIKDAPRPGTPEDKTPVARVEPAPIAPQEKKPDAAPAQAADSGKPGAKPDCEKELRRTTDLLRFFANRIQAGEDTQTV
Ga0062592_10097191223300004480SoilVPATIDNDRPVFKTSERCRGALERTVAMNNDRLLVVFVALYLIVIAALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPAAASPQADDGGKPGATPNCEKELRRTADLLRFFANRIQAGEDTQSVVADMRQQEKKISAACG*
Ga0062594_10000149933300005093SoilMKPDRLLVAFVAVYLVVIAILLIKDAPRPGTPEDKTPVARVEPAPIAPQEKKPDAAPAQAADSGKPGAKPDCEKELRRTTDLLRFFANRIQAGEDTQTVVADMRQQEKKIAAVCD*
Ga0065717_100568923300005276Arabidopsis RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0065712_1000949323300005290Miscanthus RhizosphereMKNDTLXIVFVTLYLMVIAAXLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0065712_1017519613300005290Miscanthus RhizosphereMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRRQEKKISAVCD*
Ga0065715_1018327413300005293Miscanthus RhizosphereMKHDTLLIVFVTLYLMVIAALLIKDAPRPVAIEDKAPVAEVEKAPIAKEAASPRADDSSELGSAPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0065705_1032636533300005294Switchgrass RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSA
Ga0070690_10038393533300005330Switchgrass RhizosphereTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0066388_10045163133300005332Tropical Forest SoilMRHDALLFVLVPLYLLVIAVLLIKDAPRPAPTEDKAPVAKIEMAPAAKDDTTDAAGQQTGDNSKPPSTPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRRQEKKISAVCD*
Ga0070680_10019344623300005336Corn RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0070689_10013638133300005340Switchgrass RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGPAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0070692_1015965913300005345Corn, Switchgrass And Miscanthus RhizosphereIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGPAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0070692_1059574523300005345Corn, Switchgrass And Miscanthus RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVV
Ga0070668_10081809213300005347Switchgrass RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRTDDSSKPGPAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0070659_10193671913300005366Corn RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGPAPDCEKELRRTADLLRF
Ga0070700_10010344823300005441Corn, Switchgrass And Miscanthus RhizosphereMKHDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0070681_10001550113300005458Corn RhizosphereMNNDRLLVVFVALYLIVIAALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD*
Ga0070699_10039128313300005518Corn, Switchgrass And Miscanthus RhizosphereMNNDRLLVVFVVLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD*
Ga0070704_10167945323300005549Corn, Switchgrass And Miscanthus RhizosphereALLIKDAPRPVAIEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0068856_10155806313300005614Corn RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVAD
Ga0068863_10141532823300005841Switchgrass RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0068860_10006915683300005843Switchgrass RhizosphereDTLLIVFVTLYLMVIAALLIKDAPRPVAIEDKAPVAEVEKAPIAKEAASPRADDSSELGSAPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0068860_10167538313300005843Switchgrass RhizosphereLARTVAMKPDRLLVAFVAVYLVVIAILLIKDAPRPGTPEDKTPVARVEPAPIAPQEKKPDAAPAQAADSGKPGAKPDCEKELRRTTDLLRFFANRIQAGEDTQTVVADMRQQEKKIAAVCD*
Ga0068860_10234756613300005843Switchgrass RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGPAPDCEKELRRTADLLRFFANRI
Ga0068862_10110340613300005844Switchgrass RhizosphereDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGPAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0075432_1003368443300006058Populus RhizosphereMKHDTLLIVFVTLYLMVIAALLIKDAPRPVAIEDKAPVAEVEKAPIVKEAASPRADDSSKPGSAPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRRQEKKLSAVCD*
Ga0075422_1014473823300006196Populus RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVAIEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0079221_1143471623300006804Agricultural SoilMRHDALLFVLVPLYLIVIAALLIKDAPRPVATEASPPLAKVEKAPIAKDDMPGAVRLQADDSGTPVPASNCEQELRRTASLLRFFANRIQGGEETQSVVADMRQQEKKISAVCD*
Ga0075433_1066212223300006852Populus RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRRQEKKLSAVCD*
Ga0079219_1041648933300006954Agricultural SoilMRHDALLFVLVPLYLIVIAALLIKDAPRPVATEASPPLAKVEKAPIAKDDKPGAVRLQADDSGTPVPASNCEQELRRTASLLRFFANRIQGGEETQSVVADMRQQEKKISAVCD*
Ga0079219_1137039713300006954Agricultural SoilMKPDRLLVAFVAVYLVVIAILLIKDAPRPGTPEDKTPVAKVEPAPIAPQEKKPDVAPAQAADSGKPGAAPDCEKELRRTTDLLRFFANRIQAGEDTQTVVADMRQQEKKIAAVCD*
Ga0105251_1002536223300009011Switchgrass RhizosphereMNNDRLLVVFVGLYLIVIVALLFNDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRRQEKKISAVCD*
Ga0105250_1042722713300009092Switchgrass RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRRQEKKLSAVCD*
Ga0105247_1057630013300009101Switchgrass RhizosphereKPDRLLVAFVAVYLVVIAILLIKDAPRPGTPEDKTPVARVEPAPIAPQEKKPDAAPAQAADSGKPGAKPDCEKELRRTTDLLRFFANRIQAGEDTQTVVADMRQQEKKIAAVCD*
Ga0075423_1012630313300009162Populus RhizosphereMKHDTLLIVFVTLYLMVIAALLIKDAPRPVAIEDKAPVAEVEKAPIVKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0105249_1215620113300009553Switchgrass RhizosphereVAMNHDRLLVVFVALYLLVIAALLIKDAPRPAAPEDKTPIAKVETAPMAQDDKSDAARSQADDSGKPGATQNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKISAVCN*
Ga0105249_1330006323300009553Switchgrass RhizosphereAALLIKDAPRPVATEDKAAVAAVEKAPIAKDEKASPAVPQADDSSKRSETPSCEKELRRTADLLRFFANRIQGGEDPQSVVADMRQQEKKISAVCE*
Ga0134125_1101448023300010371Terrestrial SoilLYLIVIAALLFKDAPRPVAPEVTTPVAKVETAPIAKEDKPDTARSQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRRQEKKISAVCD*
Ga0134128_1002283533300010373Terrestrial SoilMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKIAAVCD*
Ga0105239_1025434143300010375Corn RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEK
Ga0134127_1026617323300010399Terrestrial SoilMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMR
Ga0134127_1093620423300010399Terrestrial SoilMNHDRLLVVFVALYLLVIAALLIKDAPRPVAPEDKTPIAKVETAPMAQDDKSDAARSQADDGGKPGATQNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKISAVCD*
Ga0157348_101540413300012479Unplanted SoilMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQ
Ga0157349_102645813300012489Unplanted SoilMKNDTLLIVFVTLYLMVIAALLIKDAPRPVAIEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRRQEKKLSAVCD*
Ga0157329_102638513300012491Arabidopsis RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLS
Ga0157342_101450113300012507Arabidopsis RhizosphereNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRRQEKKLSAVCD*
Ga0157338_101817413300012515Arabidopsis RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVAIEDKAPVAEVEKAPIVKEAASPRADDSSKPGSAPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0157287_107662213300012885SoilIVFFTLYLMVIAALLIKDAPRPVALEEKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0157284_1003557413300012893SoilIAALLIKDAPRPVAIEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0157309_1000073543300012895SoilMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEEKAPVAEVEKAPIAKEAASPRADDSSRPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0157303_1022489123300012896SoilNHDRLLVVFVALYLLVIAALLIKDAPRPAAPEDKTPIAKVETAPIAQDDKPDAARSQADDSGKPGATPNCEKELRRTADLLRFFANRIQAGEDTQSVVADMRQQEKKISAVCD*
Ga0157293_1000228213300012898SoilMKNDTLLIVFVTLYLMVIAALLIKDAPRPVAIEDKAPVAEVEKAPIAKEAASPRADDSSELGSAPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0157289_1018334513300012903SoilLLIVFVTLYLMVIAAFLLKDAIPPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0157295_1021058123300012906SoilAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0157295_1029104423300012906SoilMRHDTLFFALYLMVIAALLIKDAPRLVATEDKAAVAAAEKAPIIKNEKASPAVPQADDSSKRSETQSCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKISAVCD*
Ga0157290_1001456523300012909SoilMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVAD
Ga0157298_1001807433300012913SoilMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQENKLSAVCD*
Ga0164299_1001231643300012958SoilMNNDRLLVVFVVLYLIVIAALLFKNAPRPVAPEVKTPVAKVETAPIAKEDKQDAARPQADDGGKPGATPTCEKELRRTADLLRFFANRIQGGEDAQSVVADMRRQEKKISAVCD*
Ga0164308_1051545323300012985SoilMKNDTLLIVFVTMYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD*
Ga0164305_1000274933300012989SoilMNNDRLLVVFVVLYLIVIAALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKQDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD*
Ga0157307_100790233300013096SoilMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSIVAD
Ga0157307_100861823300013096SoilMNNDRLLVVFVGLYLIVIVALLFNDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD*
Ga0157372_1240535413300013307Corn RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADM
Ga0157372_1339776613300013307Corn RhizosphereMIERMRSALKDRLSAIPLNVAAMGHETLFFALYLMVIAALLIKDAPRPVATEDKAAVAAVEKAPIAKDEKASPAVPQADDSSKRSETPSCEKELRRTADLLRFFANRIQGGEDPQSVVADMRQQEKKIS
Ga0163163_1000681513300014325Switchgrass RhizosphereMKPDRLLVVFVALYLVVIAILLIKDAPRPGTPEDKTPVARVEPAPIAPQEKKPDAAPAQAADSGKPGAKPDCEKELRRTTDLLRFFANRIQAGEDTQTVVADMR
Ga0157380_10000309213300014326Switchgrass RhizosphereMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFLANRIQGGEDAQSVVADMRQQEKKISAVCD*
Ga0157379_1070604513300014968Switchgrass RhizosphereIAILLIKDAPRPGTPEDKTPVARVEPAPIAPQEKKPDAAPAQAADSGKPGAKPDCEKELRRTTDLLRFFANRIQAGEDTQTVVADMRQQEKKIAAVCD*
Ga0173483_1001485213300015077SoilMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSV
Ga0132258_1086137843300015371Arabidopsis RhizosphereMDDAAMTVGAGSGLVMRHDALLFVLVPLYLLVIAVLLIRDAPRPVATEETAPVAKVERAPAAKDDKTGAAGPQADDNRKPALAPGCENELRRTADLLRFFANRIQSGEDIQSVVADMRQQDKKISAVCDER*
Ga0132257_10032312413300015373Arabidopsis RhizosphereMNNDRLLVVFVVLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDDGKPGATPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD
Ga0132255_10020629843300015374Arabidopsis RhizosphereMTVGAGSGLVMRHDALLFVLVPLYLLVIAVLLIRDAPRPVATEETAPVAKVERAPAAKDDKTGAAGPQADDNRKPALAPGCENELRRTADLLRFFANRIQSGEDIQSVVADMRQQEKKISAVCDER*
Ga0132255_10289516423300015374Arabidopsis RhizosphereMKPDRLLVVFVALYLVVIAILLIKDAPRPGTPEDKTPVAKVEPAPTAPEKKPDAAPAQAADSGKPGATPDCEKELRRTADLLRFFANRIQAGEDTQTVVADMRQQEKKIAAVCD*
Ga0173481_1000417373300019356SoilMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD
Ga0247786_108301813300022883SoilPAVAMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD
Ga0247785_103159013300022889SoilALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD
Ga0247753_100014733300022892SoilMNNDRLLVVFVGLYLIVIVALLFNDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD
Ga0247801_100034613300023064SoilMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRRQEKKISAVCD
Ga0247793_1000159123300023066SoilMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQE
Ga0247751_100046963300023069SoilMKHDTLLIVFVTLYLMVIAALLIKDAPRPVAIEDKAPVAEVEKAPIVKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD
Ga0247794_1000179033300024055SoilMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAACG
Ga0207666_100338523300025271Corn, Switchgrass And Miscanthus RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD
Ga0207673_101019623300025290Corn, Switchgrass And Miscanthus RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGPAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD
Ga0207710_1001535923300025900Switchgrass RhizosphereMKPDRLLVAFVAVYLVVIAILLIKDAPRPGTPEDKTPVARVEPAPIAPQEKKPDAAPAQAADSGKPGAKPDCEKELRRTTDLLRFFANRIQAGEDTQTVVADMRQQEKKIAAVCD
Ga0207654_1000107913300025911Corn RhizosphereMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRR
Ga0207690_1123850123300025932Corn RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLL
Ga0207670_1106124323300025936Switchgrass RhizosphereFVAVYLVVIAILLIKDAPRPGTPEDKTPVARVEPAPIAPQEKKPDAAPAQAADSGKPGAKPDCEKELRRTTDLLRFFANRIQAGEDTQTVVADMRQQEKKIAAVCD
Ga0207711_1000744733300025941Switchgrass RhizosphereMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRLQGGEDAQSVVADMRQQEKKISAVCD
Ga0207667_1090422733300025949Corn RhizosphereLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD
Ga0207640_1101512923300025981Corn RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSA
Ga0207678_1018109723300026067Corn RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVAIEDKAPVAEVEKAPIVKEAASPRADDSSKPGSAPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD
Ga0207708_1013771923300026075Corn, Switchgrass And Miscanthus RhizosphereMKHDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD
Ga0207702_1183578623300026078Corn RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGG
Ga0207683_1067990013300026121Miscanthus RhizosphereMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFLANRIQGGEDTQSVVADMRQQEKKLSAVCD
Ga0207492_10295113300026769SoilAVAMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKISAVCD
Ga0207518_10300923300026812SoilMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVV
Ga0207462_100118013300026903SoilMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVA
Ga0207578_101150723300026933SoilMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKK
Ga0209967_105915013300027364Arabidopsis Thaliana RhizosphereMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQ
Ga0207561_10153323300027430SoilMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPQADDSSKPGSAPDCEKELRRTADLLRFFANRIHDGEDTQSIVADRRQQEKKISAVCEQ
Ga0207531_10040223300027449SoilMNNDRLLVVFVVLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQ
Ga0207624_10688413300027453SoilMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGE
Ga0209970_107639413300027614Arabidopsis Thaliana RhizosphereLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD
Ga0209073_1034983023300027765Agricultural SoilRHDALLFVLVPLYLIVIAALLIKDAPRPVATEASPPLAKVEKAPIAKDDMPGAVRLQADDSGTPVPASNCEQELRRTASLLRFFANRIQGGEETQSVVADMRQQEKKISAVCD
Ga0209177_1013052713300027775Agricultural SoilMRHDALLFVLVPLYLIVIAALLIKDAPRPVATEASPPLAKVEKAPIAKDDKPGAVRLQADDSGTPVPASNCEQELRRTASLLRFFANRIQGGEETQSVVADMRQQEKKISAVCD
Ga0209813_1006903813300027866Populus EndosphereMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQ
Ga0209974_1016694933300027876Arabidopsis Thaliana RhizosphereVIAALLIKDAPRPVATEDKAAVAAAEKAPIIKNEKASPAVPQADDSSKRSETQSCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKISAVCD
Ga0207428_1011428813300027907Populus RhizosphereMKHDTLLIVFVTLYLMVIAALLIKDAPRPVAIEDKAPVAEVEKAPIVKEAASPRADDSSKPGSAPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRRQEKKLSAVCD
Ga0247827_1029101733300028889SoilMKHDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGPAPDCEKELRRTADLLRFFANRIQ
(restricted) Ga0255311_105782523300031150Sandy SoilMKHDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDNSKPGSAPDCEKELRRTANLLRFFANRIQGGEDTQSVVADMRQQEKKISAVCD
(restricted) Ga0255310_1000641623300031197Sandy SoilMKHDTLLIVFFTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPTAKGVASPRADDNSKPGSAPDCEKELRRTANLLRFFANRIQGGEDTQSVVADMRQQEKKISAVCD
(restricted) Ga0255310_1019104713300031197Sandy SoilMTTLFFKLANAGRGALERTVAMKHDTVLLVFFVLYLLVIAALLIKDAPRPVAPEDKTPVAKVEKPPIAQEDKSDAARSQADDNGKPGATPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKIAAVCD
Ga0310813_1000234323300031716SoilMIERMRSALKDRLSAMPLNVAVMGHETLFFALYLMVIAALLIKDAPRPVATEDKAAVAAVEKAPIAKDEKASPAVPQADDSSKRSETPSCEKELRRTADLLRFFANRIQGGEDPQSVVADMRQQEKKISAVCD
Ga0310885_1000803523300031943SoilMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTVDLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD
Ga0310899_1031415013300032017SoilMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKK
Ga0310889_1015039013300032179SoilMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGPAPDCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQ
Ga0310896_1000247723300032211SoilMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDGGKPGATPNCEKELRRTVDLLRFFANRIQGGEDAQSVVADMRRQEKKISAVCD
Ga0373950_0000452_4381_47133300034818Rhizosphere SoilMKNDTLLIVFVTLYLMVIAALLIKDAPRPVALEDKAPVAEVEKAPIAKEAASPRADDSSKPGSAPNCEKELRRTADLLRFFANRIQGGEDTQSVVADMRQQEKKLSAVCD
Ga0373958_0001507_1226_15703300034819Rhizosphere SoilMNNDRLLVVFVGLYLIVIVALLFKDAPRPVAPEVKTPVAKVETAPIAKEDKPDAARPQADDSGKPGATPNCEKELRRTADLLRFFANRIQGGEDAQSVVADMRQQEKKISAVCD

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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