Metagenome / Metatranscriptome Family F058298

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058298
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	90 residues
Representative Sequence	MWARVARFEGDPGDIDARLERLRSALDAGAFPSELADAKFLMLVDRESGGMLGVTLFESEEALRKGDEAMNAGPGNAGSRASVEFYEVPLHKL
Number of Associated Samples	112
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	67.67 %
% of genes near scaffold ends (potentially truncated)	39.26 %
% of genes from short scaffolds (< 2000 bps)	79.26 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (10.370 % of family members)
Environment Ontology (ENVO)	Unclassified (24.444 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.296 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.75% β-sheet: 22.31% Coil/Unstructured: 47.93%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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SCOP family	SCOP domain	Representative PDB	TM-score
d.58.4.22: Dimeric alpha+beta barrel	d2od6a1	2od6	0.73
d.58.4.18: Dimeric alpha+beta barrel	d2okqa1	2okq	0.73
d.58.4.5: Dimeric alpha+beta barrel	d2zdpa2	2zdp	0.73
d.58.4.5: Dimeric alpha+beta barrel	d1iuja_	1iuj	0.72
d.58.4.0: Dimeric alpha+beta barrel	d3hx9a_	3hx9	0.72

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF03992	ABM	8.89
PF07366	SnoaL	7.41
PF11746	DUF3303	3.70
PF07883	Cupin_2	2.96
PF14691	Fer4_20	1.48
PF12680	SnoaL_2	1.48
PF06445	GyrI-like	1.48
PF13191	AAA_16	0.74
PF11303	DUF3105	0.74
PF00730	HhH-GPD	0.74
PF00196	GerE	0.74
PF01979	Amidohydro_1	0.74
PF14016	DUF4232	0.74
PF13376	OmdA	0.74
PF04055	Radical_SAM	0.74
PF01113	DapB_N	0.74
PF02423	OCD_Mu_crystall	0.74
PF00534	Glycos_transf_1	0.74
PF00903	Glyoxalase	0.74
PF13476	AAA_23	0.74
PF08818	DUF1801	0.74
PF13714	PEP_mutase	0.74
PF11799	IMS_C	0.74
PF13521	AAA_28	0.74
PF00528	BPD_transp_1	0.74
PF01212	Beta_elim_lyase	0.74
PF02656	DUF202	0.74
PF07676	PD40	0.74
PF12681	Glyoxalase_2	0.74
PF00484	Pro_CA	0.74
PF00768	Peptidase_S11	0.74
PF00753	Lactamase_B	0.74
PF07690	MFS_1	0.74
PF00254	FKBP_C	0.74
PF00857	Isochorismatase	0.74
PF12120	Arr-ms	0.74
PF10604	Polyketide_cyc2	0.74
PF00326	Peptidase_S9	0.74
PF03807	F420_oxidored	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG1167	DNA-binding transcriptional regulator, MocR family, contains an aminotransferase domain	Transcription [K]	1.48
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	0.74
COG0076	Glutamate or tyrosine decarboxylase or a related PLP-dependent protein	Amino acid transport and metabolism [E]	0.74
COG0112	Glycine/serine hydroxymethyltransferase	Amino acid transport and metabolism [E]	0.74
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.74
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	0.74
COG0177	Endonuclease III	Replication, recombination and repair [L]	0.74
COG0288	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.74
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	0.74
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	0.74
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	0.74
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	0.74
COG1003	Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain	Amino acid transport and metabolism [E]	0.74
COG1059	Thermostable 8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.74
COG1104	Cysteine desulfurase/Cysteine sulfinate desulfinase IscS or related enzyme, NifS family	Amino acid transport and metabolism [E]	0.74
COG1194	Adenine-specific DNA glycosylase, acts on AG and A-oxoG pairs	Replication, recombination and repair [L]	0.74
COG1335	Nicotinamidase-related amidase	Coenzyme transport and metabolism [H]	0.74
COG1535	Isochorismate hydrolase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.74
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.74
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	0.74
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	0.74
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	0.74
COG2149	Uncharacterized membrane protein YidH, DUF202 family	Function unknown [S]	0.74
COG2231	3-Methyladenine DNA glycosylase, HhH-GPD/Endo3 superfamily	Replication, recombination and repair [L]	0.74
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.74
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	0.74
COG3033	Tryptophanase	Amino acid transport and metabolism [E]	0.74
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.74
COG4992	Acetylornithine/succinyldiaminopimelate/putrescine aminotransferase	Amino acid transport and metabolism [E]	0.74
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.74 %
Unclassified	root	N/A	39.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.74 %
Unclassified	root	N/A	39.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.00 %
Unclassified	root	N/A	39.26 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.74 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	40.74 %
Unclassified	root	N/A	39.26 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.26 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	35.56 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.74 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.26 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	20.00 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	1.48 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.74 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.26 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	8.15 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.44 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1.48 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.74 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.74 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.26 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	7.41 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.44 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	1.48 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.74 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.26 %
Agromyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	7.41 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.44 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1.48 %
Modestobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter	0.74 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.26 %
Agromyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	7.41 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.44 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1.48 %
unclassified Micromonospora	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora	0.74 %
unclassified Modestobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → unclassified Modestobacter	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.26 %
Agromyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	7.41 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.44 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1.48 %
Modestobacter sp. DSM 44400	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → unclassified Modestobacter → Modestobacter sp. DSM 44400	0.74 %
Micromonospora sp. S4605	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. S4605	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908043\|A2_c1_ConsensusfromContig72587	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	733	Open in IMG/M
2124908044\|A5_c1_ConsensusfromContig94525	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300003987\|Ga0055471_10094577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	869	Open in IMG/M
3300003987\|Ga0055471_10287644	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300003992\|Ga0055470_10071708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	806	Open in IMG/M
3300003993\|Ga0055468_10130206	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	735	Open in IMG/M
3300004006\|Ga0055453_10046480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1174	Open in IMG/M
3300004020\|Ga0055440_10038957	All Organisms → cellular organisms → Bacteria	1009	Open in IMG/M
3300004063\|Ga0055483_10165213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	710	Open in IMG/M
3300004092\|Ga0062389_103583755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	582	Open in IMG/M
3300005093\|Ga0062594_102842109	Not Available	539	Open in IMG/M
3300005169\|Ga0066810_10050165	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	813	Open in IMG/M
3300005186\|Ga0066676_11106579	All Organisms → cellular organisms → Bacteria → Terrabacteria group	522	Open in IMG/M
3300005332\|Ga0066388_100138145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2996	Open in IMG/M
3300005332\|Ga0066388_103043120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	857	Open in IMG/M
3300005355\|Ga0070671_101685824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Modestobacter → unclassified Modestobacter → Modestobacter sp. DSM 44400	562	Open in IMG/M
3300005437\|Ga0070710_10826565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	663	Open in IMG/M
3300005438\|Ga0070701_11124925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	554	Open in IMG/M
3300005439\|Ga0070711_100129775	All Organisms → cellular organisms → Bacteria	1876	Open in IMG/M
3300005529\|Ga0070741_10000074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	356480	Open in IMG/M
3300005533\|Ga0070734_10416448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	766	Open in IMG/M
3300005534\|Ga0070735_10037010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3336	Open in IMG/M
3300005618\|Ga0068864_101573054	Not Available	661	Open in IMG/M
3300005764\|Ga0066903_100249788	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2735	Open in IMG/M
3300005937\|Ga0081455_10044325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3882	Open in IMG/M
3300006047\|Ga0075024_100006163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4827	Open in IMG/M
3300006176\|Ga0070765_101331140	Not Available	677	Open in IMG/M
3300006577\|Ga0074050_10021220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	676	Open in IMG/M
3300009100\|Ga0075418_12282475	Not Available	590	Open in IMG/M
3300009148\|Ga0105243_10572997	All Organisms → cellular organisms → Archaea	1082	Open in IMG/M
3300009177\|Ga0105248_11563011	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300009868\|Ga0130016_10000389	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	96927	Open in IMG/M
3300010376\|Ga0126381_101513671	Not Available	970	Open in IMG/M
3300010379\|Ga0136449_101657011	Not Available	967	Open in IMG/M
3300010379\|Ga0136449_101689997	Not Available	955	Open in IMG/M
3300010379\|Ga0136449_103538223	All Organisms → cellular organisms → Bacteria → Terrabacteria group	594	Open in IMG/M
3300010398\|Ga0126383_12678776	Not Available	581	Open in IMG/M
3300011429\|Ga0137455_1077799	All Organisms → cellular organisms → Bacteria	957	Open in IMG/M
3300012010\|Ga0120118_1151424	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300012204\|Ga0137374_10031859	All Organisms → cellular organisms → Bacteria	5751	Open in IMG/M
3300012204\|Ga0137374_10114331	All Organisms → cellular organisms → Bacteria	2501	Open in IMG/M
3300012212\|Ga0150985_107967441	Not Available	812	Open in IMG/M
3300012350\|Ga0137372_10024726	All Organisms → cellular organisms → Bacteria	5573	Open in IMG/M
3300012353\|Ga0137367_10435625	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300012358\|Ga0137368_10024442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	5616	Open in IMG/M
3300012914\|Ga0157297_10299303	Not Available	605	Open in IMG/M
3300012931\|Ga0153915_10205679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2162	Open in IMG/M
3300012960\|Ga0164301_10436710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	927	Open in IMG/M
3300012960\|Ga0164301_11242933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → unclassified Micromonospora → Micromonospora sp. S4605	601	Open in IMG/M
3300012964\|Ga0153916_11799937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	685	Open in IMG/M
3300012971\|Ga0126369_12524890	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300012986\|Ga0164304_10474273	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300012989\|Ga0164305_10436204	Not Available	1013	Open in IMG/M
3300013296\|Ga0157374_11023916	Not Available	845	Open in IMG/M
3300013772\|Ga0120158_10128306	Not Available	1452	Open in IMG/M
3300014969\|Ga0157376_12187322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	592	Open in IMG/M
3300015200\|Ga0173480_10409838	Not Available	789	Open in IMG/M
3300015203\|Ga0167650_1109003	Not Available	604	Open in IMG/M
3300015371\|Ga0132258_10147433	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5639	Open in IMG/M
3300015371\|Ga0132258_10178549	All Organisms → cellular organisms → Bacteria	5128	Open in IMG/M
3300015371\|Ga0132258_10281867	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4078	Open in IMG/M
3300015371\|Ga0132258_10671973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2606	Open in IMG/M
3300015371\|Ga0132258_11251885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	1875	Open in IMG/M
3300015372\|Ga0132256_102917166	Not Available	575	Open in IMG/M
3300015372\|Ga0132256_103204145	Not Available	550	Open in IMG/M
3300015374\|Ga0132255_100045319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5687	Open in IMG/M
3300016294\|Ga0182041_12342301	Not Available	500	Open in IMG/M
3300017959\|Ga0187779_10063047	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2178	Open in IMG/M
3300017959\|Ga0187779_11034175	Not Available	571	Open in IMG/M
3300017966\|Ga0187776_11152399	Not Available	578	Open in IMG/M
3300017966\|Ga0187776_11323500	Not Available	546	Open in IMG/M
3300017973\|Ga0187780_10617554	Not Available	779	Open in IMG/M
3300017974\|Ga0187777_10577862	Not Available	790	Open in IMG/M
3300017974\|Ga0187777_10989578	Not Available	608	Open in IMG/M
3300018032\|Ga0187788_10358780	Not Available	604	Open in IMG/M
3300018032\|Ga0187788_10448534	Not Available	550	Open in IMG/M
3300018060\|Ga0187765_10328290	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	925	Open in IMG/M
3300025556\|Ga0210120_1018591	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300025796\|Ga0210113_1074628	All Organisms → cellular organisms → Bacteria	676	Open in IMG/M
3300025898\|Ga0207692_10565691	Not Available	728	Open in IMG/M
3300025919\|Ga0207657_11449724	Not Available	514	Open in IMG/M
3300025941\|Ga0207711_10936473	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300025941\|Ga0207711_11413571	Not Available	638	Open in IMG/M
3300025941\|Ga0207711_11992549	Not Available	523	Open in IMG/M
3300025944\|Ga0207661_10930614	All Organisms → cellular organisms → Bacteria	801	Open in IMG/M
3300027915\|Ga0209069_10001110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13414	Open in IMG/M
3300028563\|Ga0265319_1022298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2310	Open in IMG/M
3300028800\|Ga0265338_10333847	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1094	Open in IMG/M
3300028870\|Ga0302254_10390326	Not Available	515	Open in IMG/M
3300029984\|Ga0311332_10497911	All Organisms → cellular organisms → Bacteria	956	Open in IMG/M
3300029989\|Ga0311365_11505080	Not Available	578	Open in IMG/M
3300030002\|Ga0311350_11394792	Not Available	623	Open in IMG/M
3300030336\|Ga0247826_10807537	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300030838\|Ga0311335_10858886	Not Available	643	Open in IMG/M
3300031228\|Ga0299914_10264017	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	1521	Open in IMG/M
3300031229\|Ga0299913_11732574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	574	Open in IMG/M
3300031231\|Ga0170824_122632924	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	583	Open in IMG/M
3300031240\|Ga0265320_10087423	All Organisms → cellular organisms → Bacteria	1447	Open in IMG/M
3300031341\|Ga0307418_1005350	All Organisms → cellular organisms → Bacteria	3934	Open in IMG/M
3300031341\|Ga0307418_1086894	Not Available	819	Open in IMG/M
3300031474\|Ga0170818_104094314	All Organisms → cellular organisms → Bacteria → Terrabacteria group	694	Open in IMG/M
3300031474\|Ga0170818_106286782	Not Available	540	Open in IMG/M
3300031543\|Ga0318516_10256306	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	1012	Open in IMG/M
3300031682\|Ga0318560_10757987	Not Available	524	Open in IMG/M
3300031748\|Ga0318492_10258400	Not Available	901	Open in IMG/M
3300031770\|Ga0318521_10606113	Not Available	662	Open in IMG/M
3300031771\|Ga0318546_10528327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	829	Open in IMG/M
3300031797\|Ga0318550_10286125	Not Available	800	Open in IMG/M
3300031799\|Ga0318565_10165246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	1074	Open in IMG/M
3300031819\|Ga0318568_10733765	Not Available	613	Open in IMG/M
3300031835\|Ga0318517_10034218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Agromyces	2059	Open in IMG/M
3300031902\|Ga0302322_100329138	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1728	Open in IMG/M
3300031902\|Ga0302322_101064543	All Organisms → cellular organisms → Bacteria → Terrabacteria group	976	Open in IMG/M
3300031902\|Ga0302322_101352866	Not Available	867	Open in IMG/M
3300031938\|Ga0308175_100030598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4444	Open in IMG/M
3300031938\|Ga0308175_102147394	All Organisms → cellular organisms → Bacteria	626	Open in IMG/M
3300031954\|Ga0306926_12056065	Not Available	641	Open in IMG/M
3300032008\|Ga0318562_10494808	Not Available	709	Open in IMG/M
3300032009\|Ga0318563_10565286	Not Available	614	Open in IMG/M
3300032053\|Ga0315284_11692170	Not Available	659	Open in IMG/M
3300032075\|Ga0310890_11267764	Not Available	602	Open in IMG/M
3300032089\|Ga0318525_10197631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1034	Open in IMG/M
3300032160\|Ga0311301_11726521	Not Available	751	Open in IMG/M
3300032261\|Ga0306920_101989793	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300032401\|Ga0315275_11337072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	775	Open in IMG/M
3300032770\|Ga0335085_10014420	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	11527	Open in IMG/M
3300032770\|Ga0335085_10161690	All Organisms → cellular organisms → Bacteria	2793	Open in IMG/M
3300032783\|Ga0335079_10240396	All Organisms → cellular organisms → Bacteria	1995	Open in IMG/M
3300032828\|Ga0335080_12033879	Not Available	556	Open in IMG/M
3300032892\|Ga0335081_10377521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1834	Open in IMG/M
3300032893\|Ga0335069_10166965	All Organisms → cellular organisms → Bacteria	2712	Open in IMG/M
3300032897\|Ga0335071_10690099	Not Available	971	Open in IMG/M
3300033805\|Ga0314864_0016530	Not Available	1493	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	81.48%
Host-Associated	Host-Associated	17.78%
Engineered	Engineered	0.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.41%
Plants	Host-Associated → Plants	17.78%
Aquatic	Environmental → Aquatic	14.07%
Wastewater	Engineered → Wastewater	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.11%
Marine	Environmental → Aquatic → Marine	8.15%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.67%
Peat	Environmental → Terrestrial → Peat	5.93%
Freshwater	Environmental → Aquatic → Freshwater	3.70%
Sediment	Environmental → Aquatic → Sediment	2.22%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.48%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.33%
Wetlands	Environmental → Aquatic → Marine → Wetlands	6.67%
Loam	Environmental → Terrestrial → Soil → Loam	6.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	5.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.19%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.19%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.22%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.22%
Lake	Environmental → Aquatic → Freshwater → Lake	1.48%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	1.48%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.48%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	17.78%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	14.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	13.33%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	6.67%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	5.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.19%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.19%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.22%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.96%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.96%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.48%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.48%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.48%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.48%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.74%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.74%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.37%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.41%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	6.67%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	5.93%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.44%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.44%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.22%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.22%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.22%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.22%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.22%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	2.22%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.96%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.96%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.96%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.48%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.48%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.48%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.48%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.48%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.74%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.74%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.74%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.74%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.74%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.74%
Wastewater	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Wastewater	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908043	Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Active Layer A2	Environmental	Open in IMG/M
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
3300003987	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004006	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2	Environmental	Open in IMG/M
3300004020	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleC_D2	Environmental	Open in IMG/M
3300004063	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLB_D2	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006577	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009868	Activated sludge microbial diversity in wastewater treatment plant from Tai Wan - Bali plant Bali plant	Engineered	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300012010	Permafrost microbial communities from Nunavut, Canada - A7_35cm_12M	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015203	Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-3c, vegetated patch on medial moraine)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300025556	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Goodyear_PhragA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025796	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028563	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG	Host-Associated	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028870	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_4	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031240	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG	Host-Associated	Open in IMG/M
3300031341	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-20	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032053	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_16	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033805	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_10	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A2_c1_00720970	2124908043	Soil	MWARVARFEGDPESLDERIERLRAAIESDNLPFDLAEARLLMLVNRESGGMVGVTLFESEEAMRRGDEAMNAGPGNAGSRASVEFYEVPLHT
A5_c1_00892830	2124908044	Soil	MWARVARFEGDPESLDERIERLRAAIESDNLPFELAEARLLMLVNRESGGMVGVTLFDSEEAMRRGDEAMNAGPGNAGSRASVEF
Ga0055471_100945772	3300003987	Natural And Restored Wetlands	MWARVARFDGDPADVDARLERLRSALDAGTFASELADAKLLMLVDRQSGAMLGVTLFESEGAMHRADAVMNAGPGNAGSRSAVEFYEVPLHRL*
Ga0055471_102876441	3300003987	Natural And Restored Wetlands	MWARIARFEGDPADVDARVERLRSMLESDGMPPELADAKILLLVDHDSGGALGVTLFESEEAMRRGDEVMNAGQGHAGARSSVEFYEVPLHTLE*
Ga0055470_100717083	3300003992	Natural And Restored Wetlands	MWARMARFEGNPADVDARIERLRSAFDAGSVPSEPADAKFLMLVDRATGGMVGLALFESEEAMRRADAAMNAGPGNAGSRASVEFYEVPLHTL*
Ga0055468_101302062	3300003993	Natural And Restored Wetlands	AEMWARIARFEGDPADVDARVERLRSMLESDGMPPELADAKILLLVDHDSGGALGVTLFESEEAMRRGDEVMNAGQGHAGARSSVEFYEVPLHTLE*
Ga0055453_100464801	3300004006	Natural And Restored Wetlands	MWARVARFDGDPADVDARLERLRSALDAGTFASELGDAKLLMLVDRQSGAMLGVTLFESEGAMHRADAVLNAGPGNAGSRSAVEFYEVPLHRL*
Ga0055440_100389572	3300004020	Natural And Restored Wetlands	ADIDTRIERLRSMLETDGLPPELADAKFLLLVDRASGGELGVTLFDSEEAMRRGDQVMNAGQGRAGTRSSVEFYEVPLHTLEPTQSA*
Ga0055483_101652131	3300004063	Natural And Restored Wetlands	MWARVARFEGDPADVEGRLERLRSAFDAGTFAPELAGAKLLMLVDRDSGGMIGVSLFDSEEAMRQADEVLNAGPGNAGS
Ga0062389_1035837551	3300004092	Bog Forest Soil	MWARVARFEGDPDTIDARIQRLRGLLDSGDLPPEFRDSKFLVLVDRGSGGMLGITLFESEAAMRRGDEAMNAGPGHAGSRSAVEFYEVPIQAQ*
Ga0062594_1028421091	3300005093	Soil	ADIDARVEKLRSGVDAGTLASELADAKLLMLVDRTSGGMLGVALFDTEEAMRKADEAMNAGPGNAGSRTSVEFYEVPLHTL*
Ga0066810_100501652	3300005169	Soil	MWARVARFDGDPADIDARLEKLRSALEAGTFAAELGDAKLLLLVDRRSGGMVGVTLFDSEEAMRKADEVMNAGPGNAGSRASVEF
Ga0066676_111065791	3300005186	Soil	TRVGRLRALIESGDLPPEVQASKLLMLVDRTSGAALGITLFESEEQMRKADIAMNAGAGHAGSRSLVEFYEVPLHTLD*
Ga0066388_1001381455	3300005332	Tropical Forest Soil	VDARIERLRPMLDSGAIPPELADAKFLLLVDRISGAALGVTLFDSEEAMRRGDEVMNAGPGHAGGRSSVDFYEVPLHTLG*
Ga0066388_1030431202	3300005332	Tropical Forest Soil	MWARIARFEGDPADVDGRIERLRSMLETEGVPPELAGAKFLFLVDRASGGALGVTLFESEEAMRRGDEVMNAGQGRAGARSSVEFYEVPLHTLD*
Ga0070671_1016858241	3300005355	Switchgrass Rhizosphere	MWARVARFDGDPGDVDQRIERLRGLIESGGLPSELAEAKLLMLVDRESGGMIGVTLFESEEGMRRGDEAMNAGQGHAGSRSGVEFYEVPLHTLA*
Ga0070710_108265651	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	IDARLGRLRSAIDSGALPPELSDAKFLLLVDRASGGMLGVTLFDSEDAMRKGDEAMNAGPGNAGSRSAVDFYEVPLHTL*
Ga0070701_111249251	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MWARIARFDGDPADVDARIERLRSMLETEGLPPELAGAKFLLLVDRASGGALGVTLFESEEAMRRGDEVMNAGQGRAG
Ga0070711_1001297753	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MWARVAKFEGDPADVDTRVEKLRALIDSGEVPVGLEDAKLLLLVDRESGGMLGVTLFESEEALHRGHEAMNAGPGNAGSRSSVDFYEVPIQTL*
Ga0070741_10000074180	3300005529	Surface Soil	VASLWARVARFEGEPADVDARIERLRGLIDAGNLPPAMEGAKLLLLVDRESGSALGITLFESEEALRRGDEALNAGPGHAGSRSGVQFYEVPLHTLDA*
Ga0070734_104164481	3300005533	Surface Soil	MWARVARFEGDPAEVDARIERLRPVLDPDNLPDELAGAKFLLLVNRESGSSIGLALFESEEAMRRGDEAMNAGPGHAGSR
Ga0070735_100370102	3300005534	Surface Soil	MWARVARFEGDPAGIDGRVGRLRALVESGELPAELDQATFFLLVDRESGDALGVTLFPTEEAMLAADEAMNRGAGHAGARSGVEFYEVPVSRFPSTR*
Ga0068864_1015730542	3300005618	Switchgrass Rhizosphere	MWARVARFDGDPGDVDQRIERLRGLIESGGLPSELAEAKLLMLVDRESGGMIGVTLFESEEGMRRGDEAMNAGQGHAGSRSAVEFYEVPLHTLG*
Ga0066903_1002497881	3300005764	Tropical Forest Soil	MWARVARFEGDPGDIDARVERLSSAVESGGLPPELADANFLLLIDRESGGALGVTLFESEEAMRKGDEAMNAGPGNAGSRSSVEFYEVPLHTL*
Ga0081455_100443254	3300005937	Tabebuia Heterophylla Rhizosphere	MWARIARFEGDPADVDARVARLRSMLESDGVPPELADAKILLLVDRASGGALGVTLFESEEAMRRGDEVMNAGQGLAGARSSVEFYEVPLHTLG*
Ga0075024_1000061632	3300006047	Watersheds	MWARVAKFEGNPEDVDARVERLREMVERGGLPSELEGAKLLMLTDRESGGMLGVTLFESEEGMRKADVAMDAGGGRAGARTGVDFYEVPIRVGL*
Ga0070765_1013311402	3300006176	Soil	VWRGSTAIPKTLNARLQRLRGLLDAADLPPELTDSKFLMLVDRGSGGMLGITLFESEAAMRLGDEIMNAGPGHVGSRSSVDFYEVPIHTI*
Ga0074050_100212201	3300006577	Soil	LARFEGDPADIDARLQRLRSALDAGTFASELADAKLLMLVDRTSGGMLGVTLFESEEAMRKADEAMNAGPGNAGSRASVEFYEVPIHRL*
Ga0075418_122824751	3300009100	Populus Rhizosphere	VERLRSMLESDGMPPELADTKILLLVDRASGGALGVTLFESEEAMRRGDEVMNAGQGHAGARSSVEFYEVPLHTLG*
Ga0105243_105729971	3300009148	Miscanthus Rhizosphere	MWARVARFDGDPGDVDQRIERLRGLIESGGLPSELAEAKLLMLVDRESGAVIGVTLFESEEAMRRGDEAMNAGQGHAGS
Ga0105248_115630111	3300009177	Switchgrass Rhizosphere	MWARVARFEGDPADVNARLERLRSALDAGAFASELADTKLLMLVDRESGGMIGVTLFDSEEAMRKADEVMNAGPGNAGSRSAVEFYEVPLHRL*
Ga0130016_1000038932	3300009868	Wastewater	MWARVARFDGDPADVDARLERLRSALDAGTFAEELEGARLLMLVDRGSGGMLGVTLFESEDAMREADRVMNGGPGNAGSRSAVEFYEVPLHRL*
Ga0126381_1015136711	3300010376	Tropical Forest Soil	EGDPADVDTRVERLQSLLDSGDLPPELADATFMLFVDRVSGAALGVTLFESEEALRRGDEAMNAGAGRAGSRTGVEFYEVPLHTL*
Ga0136449_1016570112	3300010379	Peatlands Soil	VWARVARFEGDPETIESRIERLRSAIDAEKLPPELEGAKLMLLVDRSGGSMLGVTLFESEEALMRGDAAMNAGPGEAGRRSSVDFYEVPLSVNV*
Ga0136449_1016899972	3300010379	Peatlands Soil	MLALRPNVERSLQMWARVARFEGDPEDIDARLQRLRGLLDSGDLPPELADSKFLMLVDRGSGAMLGVTLFESEAAMRRGDVVMNAGPGHAGSRSLVEFYEVPIHTL*
Ga0136449_1035382231	3300010379	Peatlands Soil	MWARVARFEGDPGAMDERIQRLRAALDSGDLPFELGDAKLLMLVDRESGGMLGVTLFESEEAMRTGDRAMNAGPGNAGSRSSVEFYEVPLPTL*
Ga0126383_126787761	3300010398	Tropical Forest Soil	KFEGDPADVDARIERLRPMLDSGAIPPELADAKFLLLVDRVSGAALGVTLFDSEEAMRRGDEVMNAGQGHAGSRSSVDFYEVPLHTLG*
Ga0137455_10777992	3300011429	Soil	MWAGIARFEGDPGDVDARVERLRSMLESDGMPPELADTKILLLVDRASGGALGVTLFESEEAMRRGDEVMNAGQGHAGARSSVEFYEVPLHTLG*
Ga0120118_11514241	3300012010	Permafrost	MWARVARFEGDPADVDERIQRLRGALDSGDLPFELGDAKLLMLVDRESGGMLGVTLFESEEAMRTGDRAMNAGPGNAGSRSSVEFYEVPLHTL*
Ga0137374_100318598	3300012204	Vadose Zone Soil	MWARVARFEGDPADVDARLERLRSALDAGTFASELAGAKLLMLLDRESGGMLGVTLFESEEAMRKADAVMNAGPGNAGSRSAVEFYEVPLHRL*
Ga0137374_101143313	3300012204	Vadose Zone Soil	VARFEGDPADIDARLERLRSALDAGTFASELADAKLLMLVDRTSGGILGVTLFESEEAMRKADEAMNAGPGNAGRRASAEFYEVPPPQAVTHPAADSQQRL*
Ga0150985_1079674412	3300012212	Avena Fatua Rhizosphere	MRSRSSCGRASRDSRGDPADVDDRIGRLRGVIQADRLPPGLEGARALLLVDRESGGMMGVTLFESEEAMRLGDEAMNAGAGHAGTRSAVEFYEVPVHNL*
Ga0137372_100247268	3300012350	Vadose Zone Soil	MWARVARFEGDPADVDARLERLRSALDAGTFASELAGAKLVMLLDRESGGMLGVTLFESEEAMRKADAVMNAGPGNAGSRSAVEFYEVPLHRL*
Ga0137367_104356252	3300012353	Vadose Zone Soil	MWARVARFEGDPADVDARLERLRSALDAGTFASELAGAKLVMLLDRESGGMLGVTLFESEEAMRKADAVMNVGPGNAGSRSAVEFYEVPLHRL*
Ga0137368_100244425	3300012358	Vadose Zone Soil	VARFEGDPADIDARLERLRSALDAGTFASELADAKLLMLVDRTSGGILGVTLFESEEAMRKADEAMNAGPGNAGRRASAEFYEVPLHKL*
Ga0157297_102993031	3300012914	Soil	MWARVARFEGDPESIDARIERLRAAIESGDVPVGLAEAKLLMLVDRESGDMLGVTLFDSEEALRKGDEAMNAGPGNAGSRASVDF
Ga0153915_102056792	3300012931	Freshwater Wetlands	MWARVARFEGDPADVDARVERLRAMIESGNVPVSLEEAKFLMLVDRTSGGMLGVTLFESEDAMRRGDEAMNAGPGNAGSRASVEFYEVPLHAL*
Ga0164301_104367102	3300012960	Soil	MWARVARFEGDPADIDARLQRLRAALDAGAFPSELADATFLMLVDRASGGMLGVTLFDSEEAMHKGDAAMNAGPGNAGSRASVEFYEVPLHTL*
Ga0164301_112429331	3300012960	Soil	VCHFGKERVMWALVARFDGDPGDVDQRIERLRGLIESGGLPSELADAKLLMLVDRESGGMIGVTLFESEEGMRRGDEAMNAGQGHAGSRSAVEFYEVPLHTLG*
Ga0153916_117999371	3300012964	Freshwater Wetlands	IDARLERLRSALEAGTFASELGDAKHLMLVDRRSGGMVGVTLFDSEETMRKADEAMNAGPGNAGSRASVEFYEVPLHKL*
Ga0126369_125248901	3300012971	Tropical Forest Soil	MWARVARFEGDPGDIDARVERLSSAVESGGLPPELADANFLLLIDRESGGALGVTLFESEEAMRKGDEAMNAGPGNAGSRSSV
Ga0164304_104742731	3300012986	Soil	MWARVARFDGDPADVDARLERLRSALDAGAFASELADTKLLMLVDRQSGGMIGVTLFDSEDAMRKADEVMNAGPGNAGSRSAVEFYEVPLHRL*
Ga0164305_104362041	3300012989	Soil	MWARVARFEGDPADIDARLQRLRAALDTGAFPSELADATFLMLVDRASGGMLGVTLFDSEEAMHKGDAAMNAGPGNAGSR
Ga0157374_110239161	3300013296	Miscanthus Rhizosphere	MWARIARFDGDPADVDARIERLRSMLETEGLPPELAGAKFLLLVDRASGGALGGTLVQRQGAVRRGDEVMNAGQGRAGARSSVDFYEVPLHTLG*
Ga0120158_101283063	3300013772	Permafrost	MWARVARFEGDPADIDARIERLRALLDSGGFPPELDDAKVLLLVDRESGGMLGVTLFESEEAMRLGDEAMNAGPGNAGSRSSVEFYEVPVHTM*
Ga0157376_121873222	3300014969	Miscanthus Rhizosphere	RFEGDPADIDARLQMLRSALDAGAFPPELADAKILMLVDRASGGMLGVTLFDSEEAMRRGDEAMNAGPGNAGSRASVEF*
Ga0173480_104098381	3300015200	Soil	RVARFEGDPESIDARIERLRAAIESGDVPVGLAEAKLLMLVDRESGDMLGVTLFDSEEALRKGDEAMNAGPGNAGSRASVDFYEVPLHTL*
Ga0167650_11090031	3300015203	Glacier Forefield Soil	MWARVAKFEGDPADIDARIERLQALVDAGGFPPELENAKVLLLVDRASGGMLGVTLFESEEALRIGDEAMNAGPGNAGRRASVEFYEVPVHTL*
Ga0132258_101474336	3300015371	Arabidopsis Rhizosphere	MWARIARFEGDPADVDGRVERLRSMLESDGVPPELDDAKFLLLVNRASGGALGVTLFESEEAMRRGDVVMNAGQGHAGARSSVEFYEVPLHTLG*
Ga0132258_101785493	3300015371	Arabidopsis Rhizosphere	MWARVARFEGDPADIDARLQRLRAALDAGAFPSELADATFLMLVDRASGGVLGVTLFDSEEAMHKGDAAMNAGPGNAGSRASVEFYEVPLHTL*
Ga0132258_102818675	3300015371	Arabidopsis Rhizosphere	MWARVARFEGDPADIDARLQRLRSALDAGALPSELAGARFLMLVDRESGGMVGVTLFDTEEAMRKGDEAMNAGPGNAGSRASVELYEVPLHTL*
Ga0132258_106719732	3300015371	Arabidopsis Rhizosphere	MWARVARFDGDPGDVDQRIERLRGLIESGGLPSELAGAKLLMLVDRESGGMIGVTLFESEEGMRRGDEAMNAGQGHAGSRSAVEFYEVPLHTLG*
Ga0132258_112518852	3300015371	Arabidopsis Rhizosphere	MWARVARFEGDPADIDARLERLRSALDAGTFASELADAKLLMLVDRGSGGMVGVTLFESEEAMRKADEVMNAGPGNAGSRSSVEFYEVPLYRL*
Ga0132256_1029171661	3300015372	Arabidopsis Rhizosphere	MWARVARFDGDPGDVDQRIARLRGLIESGGLPSELAEAKLLMLVDRESGGMIGVTLFESEEGMRRGDEAMNAGQGHAGSRSAVEFYEVPLHTLG*
Ga0132256_1032041451	3300015372	Arabidopsis Rhizosphere	MWARVARFEGDPADIDARLERLRSALDAGTFASELADAKLLMLVDRSSGGMVGVTLFESEEAMRRGDEALNAMNPGGSERRTAV
Ga0132255_1000453191	3300015374	Arabidopsis Rhizosphere	MWARVARFEGDPADVDARVQKLRSALDSGALPPELAEAKFLLLVNRESGGMLGVTLFDTEDAMRKGDEAMNAGPGNAGSRASVEFFEMPLHTL*
Ga0182041_123423011	3300016294	Soil	MWARLARFEGDPADLDARVERLRSALDAGAFPPELADAKFLLLADRDSGRMLGVTLFDSEEALRRGDEAMNAGPGNAGSRASVEFYEVPL
Ga0187779_100630473	3300017959	Tropical Peatland	MWARVARFEGDPAEVDARVERLGAAIAAGDAPVDLAEAKFMLLVDRESGGMIGVTLFPTEEALRKGDAAMNAGPGNAGSRSSVEFFEVPIHTL
Ga0187779_110341751	3300017959	Tropical Peatland	RIQRLRAALDSGDLPVDLGVAKFLMLVDRESGGMLGVTLFESEDALRKGDEAMNAGPGNAGSRASVDFYEVPIHTL
Ga0187776_111523991	3300017966	Tropical Peatland	GDPGDIDARVERLRSAVESGGLPPELADAKFLLLVDRQSGEALGVTLFDSEEGMRRGDEAMNAGPGNAGSRSSVEFYEVPLHTL
Ga0187776_113235002	3300017966	Tropical Peatland	MWARVARFEGDPGDIDARLERLRSALDAGAFPSELADAKFLMLVDRESGGMLGVTLFESEEALRKGDEAMNAGPGNAGSRASVEFYEVPLHKL
Ga0187780_106175542	3300017973	Tropical Peatland	MWARVARFEGDPADVDARIERLRPMLDPEAIPPELAGAKFLLFVDRVSGSALGVTLFESEEAMRRGDELMNAGPGHAGGRSSVDFYEVPLHTLGVTP
Ga0187777_105778621	3300017974	Tropical Peatland	MWARVARFEGDPTTLDERVERLRALVDSGEVPPGMEGTKLLLLVDRESGHALGVTLFESEEALRRGDEAMNAGPGHAGSRSSVTFYEVPIYAGL
Ga0187777_109895781	3300017974	Tropical Peatland	MWARVARFEGDPADVDARIERLRPMLDPEAIPPELAGAKFLLFVDRVSGSALGVTLFESEEAMRRGDELMNAGPGHAGGRSSVDFYEVPLH
Ga0187788_103587801	3300018032	Tropical Peatland	MWARVARFEGEPGDIDARVRRLRSLLNSDGLPAELADAKLLLLVDHESGGMLGVTLFQTEEAMRKGDAVMNSGPGHAGSRSSVEFYEMPLHTL
Ga0187788_104485341	3300018032	Tropical Peatland	ARFEGDPADVDARLDRLRALFDGGLPSELEDAKFLMLTDRENGGMMSVVLFDSEEAMRKADVVMNAGQGHAGTRSGVEFYEVPLHTL
Ga0187765_103282902	3300018060	Tropical Peatland	MWARVARFEGDPGDIDERIQRLRAALDSGDLPFELGDAKVLMLVDRESGGMLGVTLFESEQAMRTADQAMNAGPGNAGSRSSVEFYEVPLHTL
Ga0210120_10185913	3300025556	Natural And Restored Wetlands	MWARVARFDGDPPDVDARLERLRSALDAGTFASELGDAKLLMLVDRQSGAMLGVTLFESEGAMHRADAVLNAGPGNAGSRSAVEFYEVPLHRL
Ga0210113_10746281	3300025796	Natural And Restored Wetlands	MWARIARFEGDPADVDARVERLRSMLESDGMPPELADAKILLLVDHDSGGALGVTLFESEEAMRRGDEVMNAGQGHAGARSSVEFYEVPLHTLE
Ga0207692_105656911	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MWARVAKFEGDPADVDTRVEKLRALIDSGEVPVGLEDAKLLLLVDRESGGMLGVTLFESEEALHRGHEAMNAGPGNAGSRSSVDFYEVPIQTL
Ga0207657_114497242	3300025919	Corn Rhizosphere	VDKRIERMRSMLETDGLPPELDGAKFLLLVDRASGGALGVTLFESEEAMRLGDEVMNAGQGRAGARSSVDFYEVPLHTLG
Ga0207711_109364732	3300025941	Switchgrass Rhizosphere	MWARVARFEGDPADVNARLERLRSALDAGAFASELADTKLLMLVDRESGGMIGVTLFDSEEAMRKADEVMNAGPGNAGSRSAVEFYEVPLHRL
Ga0207711_114135712	3300025941	Switchgrass Rhizosphere	DPADVDGRIERMRAMLETEGLPPELAGAKFLLLVDRASGGALGVTLFESEEAMRRGDEVMNAGQGRAGARSSVDFYEVPLHTLG
Ga0207711_119925492	3300025941	Switchgrass Rhizosphere	MWARVARFDGDPGDVDQRIERLRGLIESGGLPSELAEAKLLMLVDRELGGMIGVTLFESEEGMRRGDEAMNAGQGHAGSRSAVEFYE
Ga0207661_109306141	3300025944	Corn Rhizosphere	MWARVARFEGDPESIDARIERLRAAIESGDVPVGLAEAKLLMLVDRESGDMLGVTLFDSEEALRKGDEAMNAGPGNAGSRA
Ga0209069_100011108	3300027915	Watersheds	MWARVAKFEGNPEDVDARVERLREMVERGGLPSELEGAKLLMLTDRESGGMLGVTLFESEEGMRKADVAMDAGGGRAGARTGVDFYEVPIRVGL
Ga0265319_10222983	3300028563	Rhizosphere	MWARVARFEGDPADVEARVERLQGLIHADAVPPELADAKVLLLVDRASGAMLGLTLFPTEEALHKGDAVMNAGPGAAGRRSAVEFYEVPVHLGL
Ga0265338_103338472	3300028800	Rhizosphere	MWARVARFEGDPADVDARVGRMRAALDGDKLPFDIGDAKLLMLVDRESGGMLGVTLFESEEAMRRGDEAMNAGPGEAGARSSVEFYEVPIHTL
Ga0302254_103903261	3300028870	Fen	LDERIGRLRSALESGDLPVGLEEAKLLMLVDRETGEMVGVTLFESEEAMRRGDEAMNAGPGNAGSRSSVQFYEVPLHTL
Ga0311332_104979112	3300029984	Fen	MWARVARFEGDPADVEVRVQKLRAMADAGQFPAELEGAKLLLLVDRNSGGMLGVTLFESEEAMRIGDQAMNAGPGNAGSRSSVEFYEVPVHTL
Ga0311365_115050801	3300029989	Fen	APEIVAVVLDNPSGRENLMWARVAKFDGDPADVEVRVQKLRAMADAGQFPAELEGAKLLLLVDRNSGGMLGVTLFESEEAMRIGDQAMNAGPGNAGSRSSVEFYEVPVHTL
Ga0311350_113947921	3300030002	Fen	MWARVAKFDGDPADVEVRVQKLRAMADAGQFPAELEGAKLLLLVDRNSGGMLGVTLFESEEAMRIGDQAMNAGPGNAGSRSSVEFYEVPVHTL
Ga0247826_108075372	3300030336	Soil	MWARVARFSGEPADVDARLERLRALLDGNLPAELADARILMLVDRGSGSMIGITLFDSEDEMRRADVAMNAGQGHAGSRSGVEFYEVPLHLL
Ga0311335_108588862	3300030838	Fen	RVARFEGDPADIDARVERLRSGLDAGTLASELADAKLLMLVDRTSGGMLGVALFDSEEAMKKADEVMSAGPGHAGSRTSVEFYEVPLHTL
Ga0299914_102640171	3300031228	Soil	MQEASRPDEPVGSAARESRRWRKPPDIDARLERLRSALDAGTFQSQLADAKLLMLVDRRSGGMTGVTLFESEDAMLKADVVMNAGPGNAGSRSSVEFYEVPLLRL
Ga0299913_117325742	3300031229	Soil	PVGSVARESRRWRKPPDIDARLERLRSALDAGTFQSQLADAKLLMLVDRRSGGMTGVTLFESEDAMLKADVVMNAGPGNAGSRSSVEFYEVPLLRL
Ga0170824_1226329242	3300031231	Forest Soil	VDARIQRLRSALDSGDLPLDLGTAKFLMLVDRESGGMLGVTLFESEEALRKGDEAMNAGPGNAGSRSSVEFYEVPLHRL
Ga0265320_100874233	3300031240	Rhizosphere	VDARVGRMRAALDGDKLPFDIGDAKLLMLVDRESGGMLGVTLFESEEAMRRGDEAMNAGPGEAGARSSVEFYEVPIHTL
Ga0307418_10053504	3300031341	Salt Marsh	MWARVARFEGDPADVDARLERLRSFIDGNTLPAELEGAKLMMLVDREAGSMIGVTLFESEEAMRQADVVMNAGPGNAGSRSAVEFYEVPLHTL
Ga0307418_10868942	3300031341	Salt Marsh	MWARVARFEGDPADIDARVEKLRSGVDAGTLASEVADAKLLMLVDRTSGRMLGVALFDTEAAMRKADEAMNAGPGHAGS
Ga0170818_1040943142	3300031474	Forest Soil	RFDGDPADVDARLERLRSALDAGTFASELADAKLLLLVDRESGGMIGVTLFESEEALRKGDEAMNAGPGNAGSRASVEFYEVPIHTL
Ga0170818_1062867821	3300031474	Forest Soil	MWARVARFEGDPGDIDARVQRLRGALDSGDLPFDLGNAKFLLLADRESGGMLGVTLFESEEALHKGHEAMNAGPGNAGNRASVEFYEVPIHTL
Ga0318516_102563062	3300031543	Soil	MWARLARFEGDPADLDARVERLRSALDAGAFPPELADAKFLLLADRDSGRMLGVTLFDSEEALRRGDEAMNAGPGNAGSRASVEFYEVPLHTLGG
Ga0318571_102255631	3300031549	Soil	MWARLARFEGDPSDVDARIERLRPVLEPSNLPEALAGAKFLLLVDRESGSTIGLALFDSEEAMRRGDAAMNTGPG
Ga0318560_107579872	3300031682	Soil	MWARVARFEGDPTDVDTRVERLRALLDSGDLPRELADARFMLFVDRTSGAALGVTLFESEEALRRGDEAMNAGAGHAGSRSDVTFYEVPLHTL
Ga0318492_102584002	3300031748	Soil	MWARLARFEGDPADLDARVERLRSALDAGAFPPELADAKFLLLADRDSGRMLGVTLFDSEEALRRGDEAMNAGPGNAGSRASVEFYEVPLHTL
Ga0318554_108435422	3300031765	Soil	MWARLARFEGDPSDVDARIERLRPVLEPSNLPEALAGAKFLLLVDRESGSTIGLALFDSEEAMRRGDA
Ga0318521_106061131	3300031770	Soil	DERVERLRSMLESEGVPPELADAKFLLLVDRASGDALGVTLFESEEAMRRGDEVMNVGQGVAGARSSVDFYEVPLHTLG
Ga0318546_105283272	3300031771	Soil	MWARLARFEGDPADLDARVERLRSALDAGAFPPELADAKFLLLADRDSGRMLGVTLFDSEEALRTGDEAMNAGPGNAGSRSSVEFYEVPLHTLGA
Ga0318550_102861251	3300031797	Soil	MWARLARFEGDPADLDARVERLRSALDAGAFPPELADAKFLLLADRDSGRMLGVTLFDSEEALRRGDEAMNAGPGNAGSRASV
Ga0318565_101652462	3300031799	Soil	MWARLARFEGDPADLDARVERLRSALDAGAFPPELADAKFLLLADRDSGRMFGVTLFDSEEALRRGDEAMNAGPGNAGSRASVEFYEVPLHTLGG
Ga0318568_107337652	3300031819	Soil	MWARLARFEGDPADLDARVERLRSALDAGAFPPELADAKFLLLADRDSGRMLGVTLFDSEEALRRGDEAMNAGPGNAGSRASVEFYEVP
Ga0318517_100342184	3300031835	Soil	MWARLARFEGDPADLDARVERLRSALDAGAFPPELADAKFLLLADRDSGRMLGVTLFDSEEALRRGDEAMNAGPGNAGSRSSVEFYEVPLHTLGG
Ga0302322_1003291382	3300031902	Fen	EGDPADIDARVERLRSGLDAGTLASELADAKLLMLVDRTSGGMLGVALFDSEEAMKKADEVMSAGPGHAGSRTSVEFYEVPLHTL
Ga0302322_1010645432	3300031902	Fen	DPGDIDARIERLRGLLDSGDLPAGLENAKLLMLVDRESGGMLGVTLFDSEEALRKGDAVMNAGPGNAGSRSSVDFYEVPLHTL
Ga0302322_1013528662	3300031902	Fen	MWARVAKFDGDPADVEVRVQKLRAMADAGQFPAELEGAKLLLLVDRNSGGMLGVTLFESEEAMRIGDQAMNAGPGNAGSRSSVDFYEVPVHTL
Ga0308175_1000305982	3300031938	Soil	MWARVARFDGDPADVDARLERLRSALDVGTFASELADAKLLMLVDRESGGMLGVTLFESEEAMREADAVMNAGPGNAGSRSAVEFYEVPLHRL
Ga0308175_1021473941	3300031938	Soil	MWARVARFEGDPADVDARLERLRSALDAGTFASALADAKFLMLVDRESGGMVGVTLFESEEAMRKADAVMNAGPGNAGSRSAVEFYEVPLH
Ga0306926_120560652	3300031954	Soil	MWARVARFEGDPTDVDARVERLRALLDSGDLPRELADARFMLFVDRTSGAALGVTLFESEEALRRGDEAMNAGAGHAGSRSGVEFYEVPLHTF
Ga0318562_104948083	3300032008	Soil	IDERVERLRSMLESEGVPPELADAKFLLLVDRASGDALGVTLFESEEAMRRGDEVMNVGQGVAGARSSVDFYEVPLHTLG
Ga0318563_105652861	3300032009	Soil	MWARIARFDGDPADIDERVERLRSMLESEGVPPELADAKFLLLVDRASGEAMRRGDEVMNVGQGVAGARSSVDFYEVPLHTLG
Ga0315284_116921702	3300032053	Sediment	RVARFEGDPASIDARIERLRAAIESGDLPVGLAGAKLLMLVNRESGDMLGVTLFDSEEALRKGDEAMNAGPGNAGSRASVDFYEVPLHTL
Ga0310890_112677641	3300032075	Soil	MWARIARFEGDPADVDARIERLRSMLESDGLPPELADAKFLLLVHRTSGRALGVTLFESEEAMRRGDEVMNAGRGHAGARSSVDFYEVPLHTLG
Ga0318525_101976311	3300032089	Soil	PADLDARVERLRSALDAGAFPPELADAKFLLLADRDSGRMLGVTLFDSEEALRRGDEAMNAGPGNAGSRASVEFYEVPLHTLGG
Ga0311301_117265211	3300032160	Peatlands Soil	MWARVARFEGDPEDIDARLQRLRGLLDSGDLPPELADSKFLMLVDRGSGAMLGVTLFESEAAMRRGDVVMNAGPGHAGSRSLVEFYEVPIHTL
Ga0306920_1019897931	3300032261	Soil	MWARIARFDGDPADIDERVERLRSMLESEGVPPELADAKFLLLVDRASGDALGVTLFESEEAMRRGDEVMNVGQGVAGARSSVDF
Ga0315275_113370722	3300032401	Sediment	MWARVARFEGDPASIDARIERLRAAIESGDLPVGLAGAKLLMLVNRESGDMLGVTLFDSEEALRKGDEAMNAGPGNAGSRAAVD
Ga0335085_1001442010	3300032770	Soil	MWARVARFEGDPADVDARLDRLRALFDGGLPPELRDARFLMLTDRESGGMMSVVLFDSEEAMKRADVLMNAGQGHAGSRSGVEFYEVPLHTL
Ga0335085_101616902	3300032770	Soil	MWARVARFEGDPADIDARLERLRSVLDAGTFASQLGDAKFLMLVDRSSGGMIGVTLFDSEEAMRKADEVMNAGPGNAGSRSGVEFYEVPLNNL
Ga0335079_102403962	3300032783	Soil	MWARVARFEGDPGDIDERIQKLRGALDSGDLPFELGDAKVLMLVDRESGGMLGVTLFESEEAMRTADQAMNAGPGNAGSRSSVEFYEVPLHTL
Ga0335080_120338791	3300032828	Soil	MWARVARFEGDPGDIDERIQKLRGALDSGDLPFELGDAKVLMLVDRESGGMLGVTLFESREAMRTADQAMNAGPGNAGSRSSVEFYEVPLHTL
Ga0335081_103775213	3300032892	Soil	MWARVARFEGDPADVEARLERLHSALDAGMFASELADAKLLMLVDRDSGGMIGVTLFDSEEAMRKADEVLNSGPGNAGSRAAVEFYEVPLHRL
Ga0335069_101669654	3300032893	Soil	MWARVARFDGDPASIDERVQRLRSALDAGEFPPELADAKFLLLADRGSGGMLGVTLFESEEALRKGDAAMNAGPGNAGSRSSVEFYEVPLHTL
Ga0335071_106900991	3300032897	Soil	MWARVARFEGDPGDIDARVQRLRAALDSGDMPFDLGDAKFLLLADRESGGMLGVTLFATEEALRKGHEAMNAGPGNAGDRASVEFYEVPIHTL
Ga0314864_0016530_181_465	3300033805	Peatland	MWARVARFEGDPADIDARLERLRSVLDAGTFASQLGDDAKFLMLVDRSSGGMIGVTLFDSEEAMRKADKMMNAGPGNAGSRSGVEFYEVPLHSL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058298

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences