Metagenome / Metatranscriptome Family F058308

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058308
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	86 residues
Representative Sequence	MHQWRIRIAVPDDPGSRSALNDVLAAQPQARLRELPGRSARSATTGEIVVELPQDDGLVTVLSALHQISPQVFVSRADMPEPAP
Number of Associated Samples	94
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	82.22 %
% of genes near scaffold ends (potentially truncated)	37.78 %
% of genes from short scaffolds (< 2000 bps)	72.59 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.741 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.185 % of family members)
Environment Ontology (ENVO)	Unclassified (27.407 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.259 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.54% β-sheet: 23.21% Coil/Unstructured: 56.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.60
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.60
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF02771	Acyl-CoA_dh_N	28.15
PF00692	dUTPase	8.15
PF00011	HSP20	1.48
PF13411	MerR_1	1.48
PF00196	GerE	0.74
PF07859	Abhydrolase_3	0.74
PF01636	APH	0.74
PF12910	PHD_like	0.74
PF01040	UbiA	0.74
PF02742	Fe_dep_repr_C	0.74
PF12728	HTH_17	0.74
PF00285	Citrate_synt	0.74
PF02517	Rce1-like	0.74
PF06559	DCD	0.74
PF13649	Methyltransf_25	0.74
PF02861	Clp_N	0.74
PF00376	MerR	0.74
PF13185	GAF_2	0.74
PF14588	YjgF_endoribonc	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	28.15
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	8.89
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	8.15
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	1.48
COG0372	Citrate synthase	Energy production and conversion [C]	0.74
COG0542	ATP-dependent Clp protease, ATP-binding subunit ClpA	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG0657	Acetyl esterase/lipase	Lipid transport and metabolism [I]	0.74
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.74
COG1321	Mn-dependent transcriptional regulator MntR, DtxR family	Transcription [K]	0.74
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	60.74 %
Unclassified	root	N/A	39.26 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.74 %
Unclassified	root	N/A	39.26 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.74 %
Unclassified	root	N/A	39.26 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	60.00 %
Unclassified	root	N/A	39.26 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.74 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	51.85 %
Unclassified	root	N/A	39.26 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.26 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	34.81 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.26 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	7.41 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	6.67 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.93 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	5.19 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.48 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.26 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.41 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	6.67 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	5.19 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.48 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.48 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.26 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.41 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples	6.67 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	5.19 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.48 %
Thermomonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora	0.74 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.74 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	39.26 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	7.41 %
uncultured Nocardioidaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	6.67 %
Streptomyces atriruber	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces atriruber	2.96 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.48 %
Thermomonospora curvata	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora curvata	0.74 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.74 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001175\|JGI12649J13570_1000503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Thermomonospora → Thermomonospora curvata	6911	Open in IMG/M
3300001614\|JGI20249J16330_100568	Not Available	653	Open in IMG/M
3300002245\|JGIcombinedJ26739_100510131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1080	Open in IMG/M
3300002245\|JGIcombinedJ26739_101271334	Not Available	626	Open in IMG/M
3300003505\|JGIcombinedJ51221_10005068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3939	Open in IMG/M
3300003505\|JGIcombinedJ51221_10449463	Not Available	521	Open in IMG/M
3300004633\|Ga0066395_10930486	Not Available	527	Open in IMG/M
3300005591\|Ga0070761_10197986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1189	Open in IMG/M
3300005602\|Ga0070762_10161122	Not Available	1349	Open in IMG/M
3300005610\|Ga0070763_10598348	Not Available	639	Open in IMG/M
3300005764\|Ga0066903_100625943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1873	Open in IMG/M
3300005764\|Ga0066903_102172907	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1070	Open in IMG/M
3300005921\|Ga0070766_10169346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1349	Open in IMG/M
3300006176\|Ga0070765_100876511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	848	Open in IMG/M
3300010048\|Ga0126373_11069441	Not Available	873	Open in IMG/M
3300010343\|Ga0074044_10037684	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3369	Open in IMG/M
3300010366\|Ga0126379_10280193	Not Available	1661	Open in IMG/M
3300010366\|Ga0126379_12296183	Not Available	640	Open in IMG/M
3300010376\|Ga0126381_103811373	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	589	Open in IMG/M
3300010398\|Ga0126383_10080063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2849	Open in IMG/M
3300011120\|Ga0150983_10583320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1404	Open in IMG/M
3300011120\|Ga0150983_14135332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces atriruber	872	Open in IMG/M
3300014489\|Ga0182018_10281025	Not Available	909	Open in IMG/M
3300016319\|Ga0182033_12032400	Not Available	524	Open in IMG/M
3300016357\|Ga0182032_10416376	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1090	Open in IMG/M
3300016371\|Ga0182034_10180311	Not Available	1616	Open in IMG/M
3300016404\|Ga0182037_10436786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1086	Open in IMG/M
3300017821\|Ga0187812_1207022	Not Available	626	Open in IMG/M
3300017937\|Ga0187809_10031903	Not Available	1684	Open in IMG/M
3300017959\|Ga0187779_10484093	Not Available	817	Open in IMG/M
3300017959\|Ga0187779_10840329	Not Available	629	Open in IMG/M
3300017970\|Ga0187783_10026125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4327	Open in IMG/M
3300017970\|Ga0187783_10091870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2236	Open in IMG/M
3300017970\|Ga0187783_10206680	Not Available	1441	Open in IMG/M
3300017970\|Ga0187783_10366417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1048	Open in IMG/M
3300017970\|Ga0187783_10407494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	988	Open in IMG/M
3300017970\|Ga0187783_10528942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces atriruber	854	Open in IMG/M
3300017970\|Ga0187783_10625540	Not Available	778	Open in IMG/M
3300017970\|Ga0187783_11041958	Not Available	589	Open in IMG/M
3300017972\|Ga0187781_10057325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2681	Open in IMG/M
3300017972\|Ga0187781_11210310	Not Available	556	Open in IMG/M
3300017974\|Ga0187777_10818443	Not Available	666	Open in IMG/M
3300017975\|Ga0187782_10708497	Not Available	776	Open in IMG/M
3300017999\|Ga0187767_10266111	Not Available	571	Open in IMG/M
3300018060\|Ga0187765_10022643	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3011	Open in IMG/M
3300018085\|Ga0187772_10262502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1175	Open in IMG/M
3300018085\|Ga0187772_11166102	Not Available	567	Open in IMG/M
3300020581\|Ga0210399_10381563	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	1176	Open in IMG/M
3300020583\|Ga0210401_10772576	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300021170\|Ga0210400_11137988	Not Available	631	Open in IMG/M
3300021181\|Ga0210388_10104828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2424	Open in IMG/M
3300021388\|Ga0213875_10163269	Not Available	1045	Open in IMG/M
3300021402\|Ga0210385_10154221	Not Available	1645	Open in IMG/M
3300021402\|Ga0210385_10170007	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1570	Open in IMG/M
3300021402\|Ga0210385_11169194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300021407\|Ga0210383_10340661	Not Available	1291	Open in IMG/M
3300021474\|Ga0210390_11111453	Not Available	641	Open in IMG/M
3300021474\|Ga0210390_11351735	Not Available	569	Open in IMG/M
3300021477\|Ga0210398_10402144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces atriruber	1117	Open in IMG/M
3300021478\|Ga0210402_11333614	Not Available	645	Open in IMG/M
3300021560\|Ga0126371_10288868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1764	Open in IMG/M
3300021560\|Ga0126371_10297447	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1740	Open in IMG/M
3300021560\|Ga0126371_10861581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1051	Open in IMG/M
3300022513\|Ga0242667_1015741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	746	Open in IMG/M
3300024271\|Ga0224564_1130773	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	516	Open in IMG/M
3300027064\|Ga0208724_1023095	Not Available	626	Open in IMG/M
3300027110\|Ga0208488_1014139	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1585	Open in IMG/M
3300027505\|Ga0209218_1084755	Not Available	658	Open in IMG/M
3300027567\|Ga0209115_1047067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	982	Open in IMG/M
3300027652\|Ga0209007_1012196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2265	Open in IMG/M
3300027676\|Ga0209333_1000577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	20116	Open in IMG/M
3300027855\|Ga0209693_10126346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1265	Open in IMG/M
3300027879\|Ga0209169_10295271	Not Available	851	Open in IMG/M
3300027889\|Ga0209380_10024285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3421	Open in IMG/M
3300027895\|Ga0209624_10104676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1851	Open in IMG/M
3300028906\|Ga0308309_10056847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2851	Open in IMG/M
3300028906\|Ga0308309_11012713	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300030760\|Ga0265762_1065321	Not Available	754	Open in IMG/M
3300030760\|Ga0265762_1110956	Not Available	618	Open in IMG/M
3300031090\|Ga0265760_10073781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1049	Open in IMG/M
3300031543\|Ga0318516_10002147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	8053	Open in IMG/M
3300031549\|Ga0318571_10128511	Not Available	857	Open in IMG/M
3300031561\|Ga0318528_10194803	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	1084	Open in IMG/M
3300031564\|Ga0318573_10385276	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	753	Open in IMG/M
3300031573\|Ga0310915_11187924	Not Available	528	Open in IMG/M
3300031679\|Ga0318561_10030996	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2580	Open in IMG/M
3300031708\|Ga0310686_110615225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32991	Open in IMG/M
3300031713\|Ga0318496_10489100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	680	Open in IMG/M
3300031718\|Ga0307474_10033956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3749	Open in IMG/M
3300031719\|Ga0306917_10995163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	655	Open in IMG/M
3300031723\|Ga0318493_10563290	Not Available	633	Open in IMG/M
3300031724\|Ga0318500_10520413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	599	Open in IMG/M
3300031748\|Ga0318492_10072797	Not Available	1648	Open in IMG/M
3300031769\|Ga0318526_10231216	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	756	Open in IMG/M
3300031770\|Ga0318521_10147021	Not Available	1336	Open in IMG/M
3300031798\|Ga0318523_10284740	Not Available	825	Open in IMG/M
3300031823\|Ga0307478_11765057	Not Available	509	Open in IMG/M
3300031896\|Ga0318551_10052672	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2058	Open in IMG/M
3300031897\|Ga0318520_10500286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	750	Open in IMG/M
3300031910\|Ga0306923_11780751	Not Available	633	Open in IMG/M
3300031912\|Ga0306921_10727474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1139	Open in IMG/M
3300031947\|Ga0310909_10050547	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3194	Open in IMG/M
3300031954\|Ga0306926_12211171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	612	Open in IMG/M
3300032001\|Ga0306922_10116063	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2844	Open in IMG/M
3300032009\|Ga0318563_10013414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3897	Open in IMG/M
3300032009\|Ga0318563_10054283	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2059	Open in IMG/M
3300032035\|Ga0310911_10713828	Not Available	581	Open in IMG/M
3300032044\|Ga0318558_10166265	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → environmental samples → uncultured Nocardioidaceae bacterium	1067	Open in IMG/M
3300032066\|Ga0318514_10604102	Not Available	584	Open in IMG/M
3300032783\|Ga0335079_10139563	Not Available	2725	Open in IMG/M
3300032805\|Ga0335078_10000648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	53125	Open in IMG/M
3300032805\|Ga0335078_10131424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3568	Open in IMG/M
3300032805\|Ga0335078_10276530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2273	Open in IMG/M
3300032805\|Ga0335078_11216523	Not Available	868	Open in IMG/M
3300032892\|Ga0335081_11621694	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces atriruber	709	Open in IMG/M
3300032895\|Ga0335074_10003138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	22520	Open in IMG/M
3300032895\|Ga0335074_10010022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	13243	Open in IMG/M
3300032895\|Ga0335074_10038326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	6691	Open in IMG/M
3300032895\|Ga0335074_10047846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5901	Open in IMG/M
3300032895\|Ga0335074_10067990	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4825	Open in IMG/M
3300032895\|Ga0335074_10082580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4293	Open in IMG/M
3300032895\|Ga0335074_10172345	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2694	Open in IMG/M
3300032895\|Ga0335074_10789400	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	889	Open in IMG/M
3300032895\|Ga0335074_11072949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	698	Open in IMG/M
3300032896\|Ga0335075_10028148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8158	Open in IMG/M
3300032896\|Ga0335075_10250036	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2044	Open in IMG/M
3300032896\|Ga0335075_10326332	Not Available	1692	Open in IMG/M
3300032896\|Ga0335075_10358669	Not Available	1580	Open in IMG/M
3300032896\|Ga0335075_10798307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	885	Open in IMG/M
3300032896\|Ga0335075_11054529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	722	Open in IMG/M
3300032896\|Ga0335075_11135396	Not Available	685	Open in IMG/M
3300032898\|Ga0335072_10070103	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4610	Open in IMG/M
3300032955\|Ga0335076_10843096	Not Available	798	Open in IMG/M
3300033134\|Ga0335073_10008988	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14010	Open in IMG/M
3300033134\|Ga0335073_11480843	Not Available	656	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.26%
Host-Associated	Host-Associated	0.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.78%
Aquatic	Environmental → Aquatic	1.48%
Plants	Host-Associated → Plants	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.78%
Freshwater	Environmental → Aquatic → Freshwater	1.48%
Roots	Host-Associated → Plants → Roots	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.96%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	34.07%
Loam	Environmental → Terrestrial → Soil → Loam	20.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.48%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	33.33%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	33.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.63%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.48%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.74%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.19%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	19.26%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	13.33%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	11.11%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	7.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.67%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.22%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.48%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.74%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.74%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001175	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3	Environmental	Open in IMG/M
3300001614	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF015	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010343	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM1	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017821	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022513	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024271	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU5	Environmental	Open in IMG/M
3300027064	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF003 (SPAdes)	Environmental	Open in IMG/M
3300027110	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF001 (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027652	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030760	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032896	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.4	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12649J13570_10005037	3300001175	Forest Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTATSAATGEIVVELPQDEGLVGVLSALHQISPQVFVSRADMPEPAPGP*
JGI20249J16330_1005681	3300001614	Forest Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTATSVTTGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP*
JGIcombinedJ26739_1005101312	3300002245	Forest Soil	MPLWRIRIAVPDDPGSRTALNKVLATQPAARLRELPGRTARAATTGEIVVELPQDDGLVNVLSALHQISPQVFVSRADMPDTASTAG*
JGIcombinedJ26739_1012713341	3300002245	Forest Soil	GSRSALDNVLAAQPAARLRDVPARSGKSARTSEIVVELPEDDGLVSMLSALHQISPQVFVSRADMPEPAS*
JGIcombinedJ51221_100050682	3300003505	Forest Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP*
JGIcombinedJ51221_104494632	3300003505	Forest Soil	MPLWRXRIAVPDDPGSRDALNXVLATQPEARLRELPGRTAXSVTTGEIVVELPQDDGLVGVLSALHQISPQVFV
Ga0066395_109304861	3300004633	Tropical Forest Soil	LHQWRIRISVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTGEILVELPQDDGLVNILSALHRISPQVFVSRADMPEPEPAP*
Ga0070761_101979862	3300005591	Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPG
Ga0070762_101611222	3300005602	Soil	MPLWRIRIAVPDDPGSRTALNKVLATQPAARLRELPGRTARATTTGEIVVELPQDDGLVNVLSALHQISPQVFVSRADMPDTASTAG*
Ga0070763_105983481	3300005610	Soil	MPLWRIRIAVPDDPGSRSALDNVLAAQPAARLRDAPARSGKSARTSEILVELPEDDGLVSVLSALHQISPQVFVSRADMPEPAS*
Ga0066903_1006259432	3300005764	Tropical Forest Soil	LHQWRIRISVPDDPGSRSALNDVLAAQPAARLRELPGRPARSATTGEILVELPHDDGLVNMLSALHRISPQVFVSRADMPEPEPAP*
Ga0066903_1021729072	3300005764	Tropical Forest Soil	LHQWRIRISLPDDPEGRSALNEVLAAQPAARLRELPGRSARSATTGEILVELPQDDGLVTVLSALHQISPQVFVSRADMPEPAP*
Ga0070766_101693462	3300005921	Soil	MRLWRIRIAVPDDPGSRSALENVLAAQPAARLRDVPARSGKSARTSEIVVELPEDDGLVSVLSALHQISPQVFVSRADMPEPAS*
Ga0070765_1008765111	3300006176	Soil	DSRQMSANGRSFRMPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTATSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP*
Ga0126373_110694412	3300010048	Tropical Forest Soil	LPQWRIRVAIPDDPGSRSALNDVLAAQPAARLRELPGRSARSTTTSEILVELPQDDGLVSVLSALHQISPQVFVSRADMPEPEPAP*
Ga0074044_100376841	3300010343	Bog Forest Soil	MHQWRIRIAVPDDPGSRSALDEVLAAQPAARLRELPGRSARSATTGEIVVELPQDDGLVTVLSALHQISPQVFVSRADMPEPAP*
Ga0126379_102801932	3300010366	Tropical Forest Soil	DDPGSRSALNDVLAAQPAARLRELPGRPARSATTGEILVELPHDDGLVNMLSALHRISPQVFVSRADMPEPEPAP*
Ga0126379_122961831	3300010366	Tropical Forest Soil	LHQWRIRISVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTGEILVELPQDDGLVNILSALHRISPQVFVS
Ga0126381_1038113732	3300010376	Tropical Forest Soil	LPQWRIRIAVPDDPGSRSALNDVLAGQPAARLRELPGRSARSATTGEILVELPQDDGLVNILSALHRISPQVFVSRADMPEPKPAS*
Ga0126383_100800632	3300010398	Tropical Forest Soil	LPQWRIRISLPDDPGSRSALNEVLAAQPAARLRELPGRSARSATTGEILVELPQDDGLVSVLSALHQISPQVFVSRADMPEPAP*
Ga0150983_105833202	3300011120	Forest Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPEPAPGS*
Ga0150983_141353321	3300011120	Forest Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTANSVTTGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP*
Ga0182018_102810251	3300014489	Palsa	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTANSATTGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP*
Ga0182033_120324001	3300016319	Soil	RISVPDDPGGRSALNDVLAGQPAARLRELPGRSARSATTGEILVELPQDDGLVSVLSALHQISPQVFVSRADMPETAP
Ga0182032_104163761	3300016357	Soil	LPQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTSEILVELPQDDGLVNVLSALHQISPQVLV
Ga0182034_101803112	3300016371	Soil	PQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTSEILVELPQDDGLVSVLSALHQISPQVFVSRADVPEPEPAP
Ga0182037_104367862	3300016404	Soil	LPQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTSEILVELPQDDGLVNVLSALHQISPQVFVSRADMPEPEPAP
Ga0187812_12070222	3300017821	Freshwater Sediment	MPLWRIRIAVPDDPGSRSALDSVLAAQPAARLRELPGRYGTSSKTGEITVELPQDDGLVSVLSALHQISPQVFVSRADMPEPAS
Ga0187809_100319031	3300017937	Freshwater Sediment	PDDPGSRSALNDVLAAHPAARLQELPGRSARSATTSEILVELPQDDSLVSVLSALHQISPQVFVSRADMPEPEPAP
Ga0187779_104840932	3300017959	Tropical Peatland	MHQWRIRIAVPDDPGSRSALNDVLAAQPAARLQELPGRSSRSAVTGEIVVELPQDDGLVTVLSALHQISPQVFVSRADMPEPAP
Ga0187779_108403292	3300017959	Tropical Peatland	MKGAQTNGRSVLLHQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTGEILVELPQDDALVGVLSALHQISPQVFVSRADMPEPEPAP
Ga0187783_100261252	3300017970	Tropical Peatland	MPLWRIRIAVPDDTGSRSALDALLAAQPAARLREVPGRTARAATAGEIVVELPQDDDLVGVLSALHRISPQVFVSRADMEPASEPERVAPGSVQRGAG
Ga0187783_100918702	3300017970	Tropical Peatland	MHQWRIRIAVPDDPDGRSALNDVLAAQPQARLRELPGPSARSATTGEIVVELPQDDGLVTVLSALHQISPQVFVSRADMPEPAPDPT
Ga0187783_102066802	3300017970	Tropical Peatland	MPLWRIRIAVPDDPGSRGALDALLAAQPAAQLREVPGRTARAATAGEIVVELPQDDDLVGVLSALHRISPQVLVSRADMQEPASEPERIAPGSVRPGAG
Ga0187783_103664171	3300017970	Tropical Peatland	MPLWRIRIAVPDDPGSRDALNNVLATQPDARLRELPGRTAKSATTGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0187783_104074942	3300017970	Tropical Peatland	MPLWRIRIAVPDDPGSRDALNNVLATQPDARLRELPGRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0187783_105289421	3300017970	Tropical Peatland	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPSRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPASGS
Ga0187783_106255402	3300017970	Tropical Peatland	MHQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRPGRPATTGEIVVELPQDDGLVTVLSALHQISPQVFVSRADMPEPAP
Ga0187783_110419582	3300017970	Tropical Peatland	MHQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSSRSATTGEIVVELPQDDGLVTVLSALHQISPQVFVSRADMPEPAP
Ga0187781_100573252	3300017972	Tropical Peatland	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0187781_112103101	3300017972	Tropical Peatland	MPLWRIRIAVPDDTGSRSALDALLAAQPAARLREVPGRTARAATAGEIVVELPQDDDLVGVLSALHRISPQVFVSRADLEPASEPERVAPGSVQRGA
Ga0187777_108184432	3300017974	Tropical Peatland	SDRDFTSSLRRRITTATVRTDSRYTANGRSVLLHQWRIRIAVPDDPGSRSALNDVLAAQPAARLQELPGRSSRSAVTGEIVVELPQDDGLVTVLSALHQISPQVFVSRADMPEPAP
Ga0187782_107084971	3300017975	Tropical Peatland	MPLWRIRIAVPDDTGSRSALDALLATQPAARLREVPGRTARAATAGEIVVELPQDDDLVGVLSALHRISPQVFVSRADM
Ga0187767_102661111	3300017999	Tropical Peatland	QRTECLLHQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSTTTSEILVELPQDDGLVSVLSALHQISPQVFVSRADMPEPAP
Ga0187765_100226432	3300018060	Tropical Peatland	MHQWRIRIAVPDDPGSRSALNDVLAAQPQARLRELPGRPDRSATTGEIVVELPQDDGLVTVLSALHQISPQVFVSRADMPEPAP
Ga0187772_102625022	3300018085	Tropical Peatland	MHQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELTGRSSRSATTGEIVVELPQDDGLVTVLSALHQISPQVFVSRADMPEPAP
Ga0187772_111661021	3300018085	Tropical Peatland	VPRWRIRIAVPEDPGSRSALNNVLAARSAALRMLPARTAASAVTGEVVVELPQDDGLVTVLSALHQISSQ
Ga0210399_103815631	3300020581	Soil	LHQWRIRISLPDDPGGLSALNDVLAAQPAARLRELPSRSARSATTGEILVELPQDDGLVSVLSALHRISPQVFVSRADTP
Ga0210401_107725762	3300020583	Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPQARLRELPGRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0210400_111379881	3300021170	Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPEPAPGP
Ga0210388_101048282	3300021181	Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTATSVTTGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0213875_101632692	3300021388	Plant Roots	MPLWRIRIAVPDDPGSRDALNNVLATQPAARLRELPGRTANSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPASGS
Ga0210385_101542211	3300021402	Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTARAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0210385_101700072	3300021402	Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTANSVTTGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0210385_111691941	3300021402	Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTANSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0210383_103406612	3300021407	Soil	ECSLHQWRIRISLPDDPGSLSALNDVLAAQPAARLRELPSRSPRSATTGEILVELPQDDGLVSVLSALHRISPQVFVSRADMPEPEPAP
Ga0210390_111114531	3300021474	Soil	MPLWRIRIAVPDDPGSRSALDKVLAAQPAARLREVPARNGKSATTGEIVVELPEDDGLVSVLSALHQISPQVFVSRADMPEPAS
Ga0210390_113517352	3300021474	Soil	MPLWRIRIAVPDDPGSRTALNKVLATQPAARLRELPGRTARATTTGEIVVELPQDDGLVNVLSALHQISPQVFVSRADMPD
Ga0210398_104021441	3300021477	Soil	RQPSGLTVNRQVLTDGAFRMPLWRIRIAVPDDPGSRTALNKVLATQPAARLRELPGRTARATTTGEIVVELPQDDGLVNVLSALHQISPQVFVSRADMPDTASTAG
Ga0210402_113336141	3300021478	Soil	LHQWRIRISLPDDPGGLSALNDVLAAQPAARLRELPSRSARSATTGEILVELPQDDGLVSVLSALHRISPQVFVSRADTPEPEPAP
Ga0126371_102888682	3300021560	Tropical Forest Soil	LHQWRIRISVPDDPGSRSALNDVLAAQPAARLRELPGRPARSATTGEILVELPHDDGLVNMLSALHRISPQVFVSRADMPEPEPAP
Ga0126371_102974471	3300021560	Tropical Forest Soil	LHQWRIRISVPDDPGSRSALNDVLAAQPAARLRELPGQSARSATTGEILVELPQDEGLVTVLSALHQISPQVFVSRADMPEPAP
Ga0126371_108615812	3300021560	Tropical Forest Soil	LPQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSTTTSEILVELPQDDGLVSVLSALHQISPQVFVSRADMPEPEPAP
Ga0242667_10157411	3300022513	Soil	RDFTSLLQRRSTSATVRLDSRQMSANGRSFRMPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTATSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0224564_11307731	3300024271	Soil	TVRLDSRQMSANGRSFRMPLWRIRIAVPDDPGSRDALNNVLATQPQARLRELPGRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0208724_10230951	3300027064	Forest Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTATSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPEPAPGP
Ga0208488_10141392	3300027110	Forest Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPEPAPG
Ga0209218_10847551	3300027505	Forest Soil	MPLWKIRIAVPDDPGSRSALENVLAAQPAARLRDGPARSGKSARTSEIVVELPEDDGLVSVLSALHQISPQVFVSRADMPEPAS
Ga0209115_10470672	3300027567	Forest Soil	DPGSRTALNKVLATQPAARLRELPGRTTRAATTGEIVVELPQDDGLVNVLSALHQISPQVFVSRADMPDTASTAG
Ga0209007_10121962	3300027652	Forest Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTATSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0209333_100057716	3300027676	Forest Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTATSAATGEIVVELPQDEGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0209693_101263462	3300027855	Soil	MPLWRIRIAVPDDPGSRTALNKVLATQPAARLRELPGRTARATTTGEIVVELPQDDGLVNVLSALHQISPQVFVSRADMPDTASTAG
Ga0209169_102952712	3300027879	Soil	MPLWRIRIAVPDDPGSRSALDNVLAAQPAARLRDAPARSGKSARTSEILVELPEDDGLVSVLSALHQISPQVFVSRADMPEPAS
Ga0209380_100242854	3300027889	Soil	MPLWRIRIAVPDDPGSRSALENVLAAQPAARLRDVPARSGKSARTSEIVVELPEDDGLVSVLSALHQISPQVFVSRADMPEPAS
Ga0209624_101046762	3300027895	Forest Soil	MPLWRIRIAVPDDPGSRSALDNVLAAQPAARLRDVPARSGKSARTSEILVELPEDDGLVSVLSALHQISPQVFVSRADMPEPAS
Ga0308309_100568472	3300028906	Soil	MPLWRIRIAVPDDPGSRTALNKVLATQPAARLRELPGRTARAATTGEIVVELPQDDGLVNVLSALHQISPQVFVSRADMPDTASTAG
Ga0308309_110127131	3300028906	Soil	SDRDYTSLLRRRSTSATVRLDSRQMSANGRSFRMPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTANSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0265762_10653211	3300030760	Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQV
Ga0265762_11109562	3300030760	Soil	MPLWRIRIAVPDDPGSRTALNKVLATQPAARLRELPGRTARAAATGEIVVELPQDDGLVSVLSALHQISPQVFVSRADMPDTASTAG
Ga0265760_100737811	3300031090	Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRA
Ga0318516_100021474	3300031543	Soil	LPQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTSEILVELPRDDGLVNVLSALHQISPQVFVSRADVPEPEPAP
Ga0318571_101285111	3300031549	Soil	LPQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTSEILVELPQDDGLVNVLSALHQISPQVLVSRADTPEPEPA
Ga0318528_101948031	3300031561	Soil	LPQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTSEILVELPQDDGLVSVLSALHQISPQVFVSRADM
Ga0318573_103852761	3300031564	Soil	LHQWRIRISVPDDPGGRSALNDVLAGQPAARLRELPGRSARSATTGEILVELPQDDGLVSVLSALHQIS
Ga0310915_111879242	3300031573	Soil	LPQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTSEILVELPQDDGLVNVLSALHQISPQVLVSRADTPEPEPAP
Ga0318561_100309962	3300031679	Soil	LPQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTSEILVELPRDDGLVNVLSALHQISSQVFVSRADVPEPEPAP
Ga0310686_11061522522	3300031708	Soil	MPLWRIRIAVPDDPGSRSALNKVLAAQPAARLRELPGRTARAATTGEIVVELPQDDGLVSVLSALHQISPQVFVSRADMPDTASTAG
Ga0318496_104891001	3300031713	Soil	LPQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTSEILVELPQDDGLVNVLSALHQISPQVLVSRADTPE
Ga0307474_100339564	3300031718	Hardwood Forest Soil	MPLWRIRIAVPDDAGSRSALDKVLAAQPKARLREVPGRNGTARTSEIVVELPQDDGLVSVLSALHQISPQVFVSRADVPEPAS
Ga0306917_109951631	3300031719	Soil	LPQWRIRVAVPDDPGSRSALNDVLAAQPAARLREVPGRTARSATTSEILVELPRDDGLVNVLSALHQISPQVFVSRADVP
Ga0318493_105632901	3300031723	Soil	VLRLDLFIRRPHAQGACAVMWRMKGSHQRTECSLHQWRIRISVPDDPGGRSALNDVLAGQPAARLRELPGRSARSATTGEILVELPQDDGLVSVLSALHQISPQVFVSRADMPEPAP
Ga0318500_105204132	3300031724	Soil	LHQWRIRISVPDDPGGRSALNDVLAGQPAARLRELPGRSARSATTGEILVELPQDDGLVSVLSALHQISPQVFVSRADMPEPAP
Ga0318492_100727971	3300031748	Soil	LHQWRIRISVPDDPGGRSALNDVLAGQPAARLRELPGRSARSATTGEILVELPQDDGLVSVLSALHQISPQVFVSRADVPEPEPAP
Ga0318526_102312162	3300031769	Soil	LPQWRIRVAVPDDPGSRSALNDVLAAQPAARLREVPGRTARSATTSEILVELPQDDGLVSVLSALHQISPQVFVSRADMPEPEPAP
Ga0318521_101470211	3300031770	Soil	LPQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTSEILVELPQDDGLVNVLSALHQISPQVFVSRADVPEPEPAP
Ga0318523_102847402	3300031798	Soil	MKGSHQRTECSLHQWRIRISVPDDPGGRSALNDVLAGQPAARLRELPGRSARSATTGEILVELPHDDGLVSVLSALHQISPQVFVSRADMPEPAP
Ga0307478_117650571	3300031823	Hardwood Forest Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRT
Ga0318551_100526722	3300031896	Soil	LPQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSAPTGEILVELPQDDGLVNVLSALHQISPQVFVSRADVPEPEPAP
Ga0318520_105002862	3300031897	Soil	LPQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTSEILVELPQDDGLVNVLSALHQISPQVLVSRADTPEP
Ga0306923_117807511	3300031910	Soil	LHQWRIRISVPDDPGSRSALNDVLAAQPAACLRELPGRSARSSTTGEILVELPQDDGLANVLSALHRISPQVFVSR
Ga0306921_107274741	3300031912	Soil	LPQWRIRVAVPDDPGSRSALNDVLAAQPAARLREVPGRTARSATTSEILVELPQDDGLVNVLSALHQISPQVLVSRADTPEPEPAP
Ga0310909_100505475	3300031947	Soil	LPQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTSEILVELPRDDGLVNVLSALHQISPQVFV
Ga0306926_122111711	3300031954	Soil	LPQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTSEILVELPQDDGLVNVLSALHQIRP
Ga0306922_101160635	3300032001	Soil	LPQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTSEILVELPRDDGLVNGLSALHQISPQGFGSRADVPEP
Ga0318563_100134144	3300032009	Soil	LPQWRIRVAVPDDPGSRSALNDVLAAQPAARLREVPGRTARSATTSEILVELPQDDGLVSVLSALHQISPQVFVSRADVPEPEPAP
Ga0318563_100542834	3300032009	Soil	LPQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTSEILVELPRDDGLVNVLSALHQIS
Ga0310911_107138282	3300032035	Soil	LPQWRIRIAVPDDPGSRSALNDVLAAQPAARLRELPGRSARSATTSEILVELPRDDGLVNVLSALHQISPQVFVSRADVPEP
Ga0318558_101662652	3300032044	Soil	LPQWRIRVAVPDDPGSRSALNDVLAAQPAARLREVPGRTARSATTSEILVELPQDDGLVSVLSALHQIS
Ga0318514_106041022	3300032066	Soil	LPQWRIRVAVPDDPGSRSALNDVLAAQPAARLREVPGRTARSATTSEILVELPQDDGLVSVLSALHQISPQVFVSRADMP
Ga0335079_101395632	3300032783	Soil	MPLWRIRIAVPDDPGSRTALNEVLATQPAARLRELPGRTARSATTGEVVVELPQDDGLVSVLSALHQISPQVFVSRADIPEPAS
Ga0335078_1000064849	3300032805	Soil	MPLWRIRIAVPDDPGSRSALNDVLAAQPAARLREVPGRAGRSAASGEIVVELPEDDGLVTVLSALHQISPQVFVSRADTPELAP
Ga0335078_101314242	3300032805	Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGS
Ga0335078_102765302	3300032805	Soil	MHQWRIRIAVPDDPGSRSALNDVLAAQPQARLRELPGRSARSATTGEIVVELPQDDGLVTVLSALHQISPQVFVSRADMPEPAP
Ga0335078_112165232	3300032805	Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTPKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEP
Ga0335081_116216942	3300032892	Soil	SVPMPRWRIRIAVPEDPGGRSALNNVLAAQSAALLVLPARAAASAVTGEVVAELPQDDGLVTVLSALHQISSQVFVSRAGGW
Ga0335074_1000313819	3300032895	Soil	MPLWRIRIAVPDDTGSRSALDAFLAAQPAARLREVPGRTARAATAGEIVLELPQDDDLVSVLSALHRISPQVFVSRTDMQEPTSEPERIAPGSVQRGTG
Ga0335074_1001002217	3300032895	Soil	MPLWRIRIAVPDDVGSRSALDKVLAAQPKARLREVPGRGGTSARTGEIVVELPQDDSLVSVLSALHQISPQVFVSRADMPEPAS
Ga0335074_100383266	3300032895	Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTPKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0335074_100478462	3300032895	Soil	MPLWRIRIAVPDDTGSRSALDALLAAQPAARLREVPGRTARAATAGEIVLELPQDDDLVSVLSALHRISPQVFVSRTDMQETASEPERVAPGSVQRGVG
Ga0335074_100679903	3300032895	Soil	MPLWRIRIAVPDDVGSRSALEKVLASQPKARLREVPARNGTSARTSEIVVELPQDDGLVSVLSALHQISPQVFVSRADMPEPAS
Ga0335074_100825802	3300032895	Soil	MPLWRIRIAVPDDTGSRSALDALLASQPAARLREVPGRTARAATAGEIVLELPQDDDLVGVLSALHRISPQVFVSRTDMKEPASEPERIAPGSVQRGAG
Ga0335074_101723453	3300032895	Soil	MPLWRIRIAVPDDTGSRSALDALLATQPAARLREVPGRTARAATAGEIVVELPQDDDLVGVLSALHRISPQVFVSRADMEPVSEPERVAPGSVQRGAG
Ga0335074_107894002	3300032895	Soil	MPLWRIRIAVPDDAGSRDALNNVLATQPEARLRELPGRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0335074_110729492	3300032895	Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTAKSATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0335075_100281486	3300032896	Soil	MPLWRIRIAVPDDPGSRDALNNVLAEQPAARLRELPGRNGSSATTGEIVVELPQDDGLVNILSALHQISPQVFVSRADMPDLADDPERLTSGSASHGTS
Ga0335075_102500362	3300032896	Soil	MPLWRIRIAVPDDTGSRSALDALLAAQPAARLREVPGRTARAATAGEIVVELPQDDDLVGVLSALHRISPQVFVSRADMEPVSEPERVAPGSVQRGAG
Ga0335075_103263321	3300032896	Soil	MPLWRIRIAVPDDTGSRSALDALLAAQPAARLREVPGRTARAATAGEIVLELPQDDDLVGVLSALHRISPQVFVSRTDMQEPASEPERIAPGSVQRGAG
Ga0335075_103586691	3300032896	Soil	RMPLWRIRIAVPDDAGSRDALNNVLATQPEARLRELPGRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0335075_107983071	3300032896	Soil	IRIAVPDDPGSRDALNNVLATQPEARLRELPGRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0335075_110545292	3300032896	Soil	MPLWRIRIAVPDDAGSRDALNNVLATQPEARLRELPGRTATSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADMPEPAPGP
Ga0335075_111353961	3300032896	Soil	RIAVPDDTGSRSALDALLAAQPAARLREVPGRTARAATASEIVVELPQDDDLVGVLSALHRISPQVFVSRADMEPASEPERVAPGSVQHGAG
Ga0335072_100701033	3300032898	Soil	MPLWRIRIAVPDDVSSRSALDKVLASQPKARLRQGPSRNGTSARTSEIVVELPQDDGLVSVLSALHQISPQVFVSRADMPEPAS
Ga0335076_108430961	3300032955	Soil	MPLWRIRIAVPDDPGSRDALNNVLATQPEARLRELPGRTAKSAATGEIVVELPQDDGLVGVLSALHQISPQVFVSRADM
Ga0335073_1000898812	3300033134	Soil	MPLWRIRIAVPDDPGSRSALNEVLAGQPTARLREVPARGGREAKAGEIVVELPQDDGLVTVLSALHRISPQVFVSRADMPEPAS
Ga0335073_114808432	3300033134	Soil	MPLWRIRIAVPDDTGGRSALDALLAAQPAARLREVPGRTGRAATAGEIVVELPQDDDLVGVLSALHRISPQVFVSRADMEPVPEPERV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058308

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences