Metagenome / Metatranscriptome Family F058336

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058336
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	71 residues
Representative Sequence	QYVLQVIETGSVSLGHGGSTGGSSPLDQIIQAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRHAT
Number of Associated Samples	119
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.74 %
% of genes near scaffold ends (potentially truncated)	97.78 %
% of genes from short scaffolds (< 2000 bps)	88.15 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (58.519 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (40.000 % of family members)
Environment Ontology (ENVO)	Unclassified (44.444 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (40.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.92% β-sheet: 0.00% Coil/Unstructured: 54.08%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.44
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.44
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF07479	NAD_Gly3P_dh_C	5.19
PF04286	DUF445	4.44
PF12697	Abhydrolase_6	4.44
PF01636	APH	2.96
PF00392	GntR	2.96
PF04229	GrpB	2.22
PF13460	NAD_binding_10	2.22
PF11209	LmeA	2.22
PF11774	Lsr2	2.22
PF00582	Usp	1.48
PF00571	CBS	1.48
PF03966	Trm112p	1.48
PF00561	Abhydrolase_1	1.48
PF00106	adh_short	0.74
PF00496	SBP_bac_5	0.74
PF00196	GerE	0.74
PF00149	Metallophos	0.74
PF01979	Amidohydro_1	0.74
PF12802	MarR_2	0.74
PF13376	OmdA	0.74
PF00583	Acetyltransf_1	0.74
PF02568	ThiI	0.74
PF00400	WD40	0.74
PF00383	dCMP_cyt_deam_1	0.74
PF13602	ADH_zinc_N_2	0.74
PF01243	Putative_PNPOx	0.74
PF01494	FAD_binding_3	0.74
PF02566	OsmC	0.74
PF03737	RraA-like	0.74
PF02826	2-Hacid_dh_C	0.74
PF13450	NAD_binding_8	0.74
PF12840	HTH_20	0.74
PF07883	Cupin_2	0.74
PF00441	Acyl-CoA_dh_1	0.74
PF08734	GYD	0.74
PF04237	YjbR	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0240	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	5.19
COG2733	Uncharacterized membrane-anchored protein YjiN, DUF445 family	Function unknown [S]	4.44
COG4399	Uncharacterized membrane protein YheB, UPF0754 family	Function unknown [S]	4.44
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	2.22
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.48
COG0037	tRNA(Ile)-lysidine synthase TilS/MesJ	Translation, ribosomal structure and biogenesis [J]	0.74
COG0301	Adenylyl- and sulfurtransferase ThiI (thiamine and tRNA 4-thiouridine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.74
COG0482	tRNA U34 2-thiouridine synthase MnmA/TrmU, contains the PP-loop ATPase domain	Translation, ribosomal structure and biogenesis [J]	0.74
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.74
COG0603	7-cyano-7-deazaguanine synthase (queuosine biosynthesis)	Translation, ribosomal structure and biogenesis [J]	0.74
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.74
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.74
COG0684	RNA degradosome component RraA (regulator of RNase E activity)	Translation, ribosomal structure and biogenesis [J]	0.74
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.74
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.74
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.74
COG2315	Predicted DNA-binding protein with Ã¢â‚¬Ëœdouble-wingÃ¢â‚¬â„¢ structural motif, MmcQ/YjbR family	Transcription [K]	0.74
COG4274	Uncharacterized conserved protein, contains GYD domain	Function unknown [S]	0.74

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	58.52 %
Unclassified	root	N/A	41.48 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	58.52 %
Unclassified	root	N/A	41.48 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	58.52 %
Unclassified	root	N/A	41.48 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	51.85 %
Unclassified	root	N/A	41.48 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	48.15 %
Unclassified	root	N/A	41.48 %
Candidatus Dormibacteraeota	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota	2.96 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.48 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	37.78 %
Candidatus Dormibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter	2.22 %
unclassified Candidatus Dormibacteraeota	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota	0.74 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.74 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.48 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.19 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	3.70 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	3.70 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	2.22 %
unclassified Candidatus Dormibacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter	2.22 %
unclassified Thermoleophilia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia	0.74 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.74 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.74 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.74 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.74 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.74 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.48 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	4.44 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	3.70 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2.22 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2.22 %
Candidatus Dormibacter sp. RRmetagenome_bin12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	2.22 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1.48 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.74 %
Prochlorococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae	0.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.74 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.74 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.74 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.74 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.48 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	4.44 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	3.70 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2.22 %
Candidatus Dormibacter sp. RRmetagenome_bin12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	2.22 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.48 %
Kitasatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora	0.74 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.74 %
Blastococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus	0.74 %
Cyanobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium	0.74 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.74 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.74 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	41.48 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	4.44 %
Frankia saprophytica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia saprophytica	2.22 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	2.22 %
Candidatus Dormibacter sp. RRmetagenome_bin12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	2.22 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	1.48 %
Microbacterium ulmi	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium ulmi	0.74 %
Kitasatospora gansuensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → Kitasatospora gansuensis	0.74 %
Candidatus Blastococcus massiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Candidatus Blastococcus massiliensis	0.74 %
Cyanobium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium	0.74 %
Thermoleophilia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	0.74 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.74 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.74 %
Candidatus Dormibacteraeota bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10333647	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300005162\|Ga0066814_10034621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	773	Open in IMG/M
3300005171\|Ga0066677_10759461	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300005331\|Ga0070670_100514182	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1066	Open in IMG/M
3300005338\|Ga0068868_100892283	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	807	Open in IMG/M
3300005356\|Ga0070674_100247844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1398	Open in IMG/M
3300005437\|Ga0070710_10068731	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2036	Open in IMG/M
3300005438\|Ga0070701_10610790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	723	Open in IMG/M
3300005468\|Ga0070707_100905482	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	847	Open in IMG/M
3300005526\|Ga0073909_10512119	Not Available	582	Open in IMG/M
3300005560\|Ga0066670_10360220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	887	Open in IMG/M
3300005576\|Ga0066708_10333446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	973	Open in IMG/M
3300006175\|Ga0070712_101191321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	662	Open in IMG/M
3300006903\|Ga0075426_11423762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	527	Open in IMG/M
3300009525\|Ga0116220_10272821	Not Available	741	Open in IMG/M
3300009826\|Ga0123355_12006273	Not Available	536	Open in IMG/M
3300010048\|Ga0126373_10171704	All Organisms → cellular organisms → Bacteria	2080	Open in IMG/M
3300010048\|Ga0126373_10941198	Not Available	929	Open in IMG/M
3300010358\|Ga0126370_10793018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	844	Open in IMG/M
3300010361\|Ga0126378_10576137	Not Available	1240	Open in IMG/M
3300012201\|Ga0137365_10236534	All Organisms → cellular organisms → Bacteria	1361	Open in IMG/M
3300012207\|Ga0137381_10217687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1656	Open in IMG/M
3300012209\|Ga0137379_11695745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Kitasatospora → Kitasatospora gansuensis	529	Open in IMG/M
3300012363\|Ga0137390_10356455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1443	Open in IMG/M
3300012481\|Ga0157320_1015862	Not Available	642	Open in IMG/M
3300012903\|Ga0157289_10100732	All Organisms → cellular organisms → Bacteria	826	Open in IMG/M
3300012948\|Ga0126375_12073084	Not Available	504	Open in IMG/M
3300012986\|Ga0164304_10049044	Not Available	2288	Open in IMG/M
3300012987\|Ga0164307_10917738	Not Available	706	Open in IMG/M
3300013307\|Ga0157372_10938209	Not Available	1003	Open in IMG/M
3300016294\|Ga0182041_10872666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	807	Open in IMG/M
3300016319\|Ga0182033_10541419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1005	Open in IMG/M
3300016357\|Ga0182032_10037220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3039	Open in IMG/M
3300016371\|Ga0182034_10627131	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	909	Open in IMG/M
3300016371\|Ga0182034_11254942	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	645	Open in IMG/M
3300016371\|Ga0182034_11514213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	588	Open in IMG/M
3300016404\|Ga0182037_11279043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	646	Open in IMG/M
3300016422\|Ga0182039_12205301	Not Available	508	Open in IMG/M
3300017928\|Ga0187806_1028080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1657	Open in IMG/M
3300017928\|Ga0187806_1246745	Not Available	617	Open in IMG/M
3300017932\|Ga0187814_10151599	All Organisms → cellular organisms → Bacteria	864	Open in IMG/M
3300017937\|Ga0187809_10197366	Not Available	712	Open in IMG/M
3300017943\|Ga0187819_10738887	Not Available	554	Open in IMG/M
3300017959\|Ga0187779_10149682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1438	Open in IMG/M
3300017970\|Ga0187783_10117094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1964	Open in IMG/M
3300017970\|Ga0187783_10471168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	911	Open in IMG/M
3300017970\|Ga0187783_10475462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	906	Open in IMG/M
3300017972\|Ga0187781_11304719	Not Available	535	Open in IMG/M
3300017973\|Ga0187780_10025238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4228	Open in IMG/M
3300017999\|Ga0187767_10230300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → unclassified Thermoleophilia → Thermoleophilia bacterium	600	Open in IMG/M
3300018085\|Ga0187772_11185424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	562	Open in IMG/M
3300018482\|Ga0066669_10621202	Not Available	949	Open in IMG/M
3300019887\|Ga0193729_1201314	Not Available	678	Open in IMG/M
3300020082\|Ga0206353_11948127	Not Available	792	Open in IMG/M
3300020581\|Ga0210399_10320686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1293	Open in IMG/M
3300020581\|Ga0210399_11199005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	603	Open in IMG/M
3300020581\|Ga0210399_11231545	All Organisms → cellular organisms → Bacteria	593	Open in IMG/M
3300021181\|Ga0210388_11265629	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300021374\|Ga0213881_10142559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1047	Open in IMG/M
3300021403\|Ga0210397_11333257	Not Available	557	Open in IMG/M
3300022722\|Ga0242657_1199077	Not Available	553	Open in IMG/M
3300024245\|Ga0247677_1002856	Not Available	2188	Open in IMG/M
3300025321\|Ga0207656_10036849	Not Available	2054	Open in IMG/M
3300025906\|Ga0207699_11068584	Not Available	597	Open in IMG/M
3300025925\|Ga0207650_10640420	Not Available	896	Open in IMG/M
3300025934\|Ga0207686_10160419	Not Available	1575	Open in IMG/M
3300025936\|Ga0207670_11234077	Not Available	633	Open in IMG/M
3300025949\|Ga0207667_11669374	Not Available	604	Open in IMG/M
3300026089\|Ga0207648_10348452	Not Available	1335	Open in IMG/M
3300026995\|Ga0208761_1006569	Not Available	917	Open in IMG/M
3300027167\|Ga0208096_106684	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales → Prochlorococcaceae → Cyanobium	593	Open in IMG/M
3300027783\|Ga0209448_10248673	Not Available	587	Open in IMG/M
3300028796\|Ga0307287_10209886	Not Available	739	Open in IMG/M
3300029999\|Ga0311339_11849729	Not Available	522	Open in IMG/M
3300030741\|Ga0265459_12634316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	622	Open in IMG/M
3300031544\|Ga0318534_10164574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Blastococcus → Candidatus Blastococcus massiliensis	1281	Open in IMG/M
3300031546\|Ga0318538_10836503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	500	Open in IMG/M
3300031549\|Ga0318571_10302392	Not Available	602	Open in IMG/M
3300031572\|Ga0318515_10704482	Not Available	534	Open in IMG/M
3300031573\|Ga0310915_10286900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1162	Open in IMG/M
3300031640\|Ga0318555_10072715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	1779	Open in IMG/M
3300031640\|Ga0318555_10705310	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	545	Open in IMG/M
3300031679\|Ga0318561_10752739	Not Available	535	Open in IMG/M
3300031680\|Ga0318574_10040346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	2412	Open in IMG/M
3300031681\|Ga0318572_10305095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → unclassified Candidatus Dormibacteraeota → Candidatus Dormibacteraeota bacterium	941	Open in IMG/M
3300031708\|Ga0310686_101732052	Not Available	1272	Open in IMG/M
3300031708\|Ga0310686_105828654	Not Available	552	Open in IMG/M
3300031713\|Ga0318496_10446582	Not Available	715	Open in IMG/M
3300031718\|Ga0307474_11339340	Not Available	565	Open in IMG/M
3300031719\|Ga0306917_11285943	Not Available	566	Open in IMG/M
3300031723\|Ga0318493_10109698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1394	Open in IMG/M
3300031724\|Ga0318500_10459147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	638	Open in IMG/M
3300031744\|Ga0306918_11112116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	612	Open in IMG/M
3300031747\|Ga0318502_10008160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4618	Open in IMG/M
3300031748\|Ga0318492_10015690	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3199	Open in IMG/M
3300031748\|Ga0318492_10356502	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300031751\|Ga0318494_10004223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6337	Open in IMG/M
3300031753\|Ga0307477_10431564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	900	Open in IMG/M
3300031765\|Ga0318554_10810631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	523	Open in IMG/M
3300031765\|Ga0318554_10843305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	512	Open in IMG/M
3300031769\|Ga0318526_10330876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	623	Open in IMG/M
3300031770\|Ga0318521_10764564	Not Available	588	Open in IMG/M
3300031770\|Ga0318521_10964645	Not Available	522	Open in IMG/M
3300031771\|Ga0318546_10681618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	723	Open in IMG/M
3300031771\|Ga0318546_11134201	Not Available	549	Open in IMG/M
3300031781\|Ga0318547_10902797	Not Available	551	Open in IMG/M
3300031795\|Ga0318557_10249505	Not Available	813	Open in IMG/M
3300031797\|Ga0318550_10264314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	835	Open in IMG/M
3300031805\|Ga0318497_10440634	Not Available	729	Open in IMG/M
3300031819\|Ga0318568_10521662	Not Available	741	Open in IMG/M
3300031821\|Ga0318567_10702935	Not Available	573	Open in IMG/M
3300031821\|Ga0318567_10779907	Not Available	542	Open in IMG/M
3300031831\|Ga0318564_10499138	Not Available	528	Open in IMG/M
3300031835\|Ga0318517_10032243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia saprophytica	2111	Open in IMG/M
3300031910\|Ga0306923_10324461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1757	Open in IMG/M
3300031912\|Ga0306921_10615111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1255	Open in IMG/M
3300031942\|Ga0310916_11362483	Not Available	582	Open in IMG/M
3300031946\|Ga0310910_10536674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Candidatus Dormibacteraeota → Candidatus Dormibacter → unclassified Candidatus Dormibacter → Candidatus Dormibacter sp. RRmetagenome_bin12	928	Open in IMG/M
3300031947\|Ga0310909_10092664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2416	Open in IMG/M
3300031981\|Ga0318531_10471346	Not Available	569	Open in IMG/M
3300032001\|Ga0306922_10192674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia saprophytica	2187	Open in IMG/M
3300032008\|Ga0318562_10215880	All Organisms → cellular organisms → Bacteria	1112	Open in IMG/M
3300032041\|Ga0318549_10199319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	898	Open in IMG/M
3300032054\|Ga0318570_10112565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	1197	Open in IMG/M
3300032063\|Ga0318504_10427849	Not Available	632	Open in IMG/M
3300032063\|Ga0318504_10639878	Not Available	511	Open in IMG/M
3300032066\|Ga0318514_10016262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3308	Open in IMG/M
3300032067\|Ga0318524_10056348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia saprophytica	1883	Open in IMG/M
3300032076\|Ga0306924_11055895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	888	Open in IMG/M
3300032089\|Ga0318525_10606152	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	558	Open in IMG/M
3300032090\|Ga0318518_10490572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	629	Open in IMG/M
3300032829\|Ga0335070_10917898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	810	Open in IMG/M
3300032892\|Ga0335081_12055281	Not Available	607	Open in IMG/M
3300033134\|Ga0335073_10270270	Not Available	2058	Open in IMG/M
3300033158\|Ga0335077_10476422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → Microbacterium ulmi	1325	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.11%
Host-Associated	Host-Associated	8.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	86.67%
Plants	Host-Associated → Plants	8.15%
Aquatic	Environmental → Aquatic	4.44%
Arthropoda	Host-Associated → Arthropoda	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	85.19%
Freshwater	Environmental → Aquatic → Freshwater	4.44%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.44%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.70%
Peat	Environmental → Terrestrial → Peat	0.74%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.74%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	70.37%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.89%
Loam	Environmental → Terrestrial → Soil → Loam	5.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.44%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.22%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.22%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.74%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.74%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	51.85%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.30%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.44%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.22%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.74%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.74%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.74%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	40.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.37%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	5.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.19%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.70%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.96%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.48%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.48%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.48%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.74%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.74%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.74%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.74%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.74%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.74%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012481	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.1.yng.040610	Host-Associated	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017928	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_1	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017999	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP10_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300022722	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-12-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025949	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026995	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB (SPAdes)	Environmental	Open in IMG/M
3300027167	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF034 (SPAdes)	Environmental	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_103336471	3300001356	Peatlands Soil	LGHGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRHAP*
Ga0066814_100346211	3300005162	Soil	MTHLGASTALQQYVLNVIETGSVSLPHGGSSGGSSPLDQIIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRPRRH*
Ga0066677_107594612	3300005171	Soil	HGGSTGGNSPLDQIVQAGYAAFTSALHGALYLSAALLAGAALLSAVTLRQRRHAAESAYGEQAG*
Ga0070670_1005141821	3300005331	Switchgrass Rhizosphere	MTHLGATPALQQYVLNVIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRQ*
Ga0068868_1008922832	3300005338	Miscanthus Rhizosphere	RSGLVSRMTHLGATPALQQYVLNVIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRQ*
Ga0070674_1002478441	3300005356	Miscanthus Rhizosphere	RSGLVSRMTHLGATPALQQYVLQVIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRQ*
Ga0070710_100687311	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	LQVIETGSVSLGHGGSTGNGPLDQIIQAGYAAFTSALHAALYLSAALLAGAALLAAITLRQRRHAA*
Ga0070701_106107902	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	AELRSGLVSRMTHLGASPALQQYVLQVIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRQ*
Ga0070707_1009054821	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VSRMTHLGASPALQQYVLQVIETGSVSLPHGGSAGGNSPLDQIIQAGFAAFTGALHSALYLSAALLAAAALLSAVTLRPRRR*
Ga0073909_105121191	3300005526	Surface Soil	HLGATPALQQYVLNVIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRPRRQ*
Ga0066670_103602202	3300005560	Soil	RSGLVSRMTHLGATPALQQYVLQVIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRPRRQ*
Ga0066708_103334462	3300005576	Soil	ELRSGLVSRMTHLGATPALQQYVLQVIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRPRRQ*
Ga0070712_1011913211	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	TPALQQYVLQVIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRQ*
Ga0075426_114237622	3300006903	Populus Rhizosphere	SLPHGGSTGGSSPIDQLVQAGFGAFTGALHAALYLSAALLAAAALLSAVTLRQRRHAT*
Ga0116220_102728211	3300009525	Peatlands Soil	THLGASAALQQYVLQVIETGSVSLGHGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRHAP*
Ga0123355_120062732	3300009826	Termite Gut	GGTPTGNSPLDQIVRAGYAAFTSALHDALYLSAALLAGAALLSAVTLRRRREQHSAELRT
Ga0126373_101717041	3300010048	Tropical Forest Soil	LQAYVLQVIETGSVSLNRAGSAAGSGPLGQIIQAGFGAFTSALHAALYLSAALLGFAALLCAITMRQHSSASHSQDLA*
Ga0126373_109411983	3300010048	Tropical Forest Soil	ETGSVSLPHGGSAGGNSPLDQIIQAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRYAT*
Ga0126370_107930181	3300010358	Tropical Forest Soil	YVLQVIETGSVSLNRAGAAAGSGPLGQIIQAGFGAFTSALHEALYLSAALLGVAALLSAVTMRQHRHASQDLT*
Ga0126378_105761372	3300010361	Tropical Forest Soil	NAELRSGLVSRMTHLGASAALQQYVLQVIQTGSVSLGHGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRHATSAALDQANDA*
Ga0137365_102365342	3300012201	Vadose Zone Soil	SLPHGSSSTGNGPLDQIIQAGYAAFTGALHAALYLSAALLAAAALLSAVTLRHRRHAT*
Ga0137381_102176875	3300012207	Vadose Zone Soil	GASAALQQYVLQVIETGSVSLPHGSSSTGNGPLDQIIQAGYAAFTGALHDALYLSAALLAGAALLSAITLRQRRPAT*
Ga0137379_116957451	3300012209	Vadose Zone Soil	NAELRSGVVSRMTHLGASAALQQYVLQVIETGSVSLPHGSESTGNGPLDQIIQAGYAAFTGALHDALYLSAALLAGAALLSAVTLRQRRHAA*
Ga0137390_103564551	3300012363	Vadose Zone Soil	LGGVVNIEMRSGVVSRMTHLGASAALQQYVLQVIETGTVSLPHGSSSTGNGPLDQIIQAGYAAFTGALHDALYLSAALLAAAALLSAVTLRSARHR*
Ga0157320_10158621	3300012481	Arabidopsis Rhizosphere	QVIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRQ*
Ga0157289_101007323	3300012903	Soil	LVSRMTHLGATPALQQYVLNVIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRR*
Ga0126375_120730842	3300012948	Tropical Forest Soil	LGASAALQQYVLQVIETGSVSLPHGGSSGGNSPLDQIIQAGFDAFTGALHSALYLSAALLAGAALLSAVTLRQRRR*
Ga0164304_100490444	3300012986	Soil	VIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRQ*
Ga0164307_109177382	3300012987	Soil	LPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRQ*
Ga0157372_109382091	3300013307	Corn Rhizosphere	SVSLPHGGSAGGSSPLDQIIQAGFAAFTGALHAALYLSAALLAAAALLSAVTLRPRRRAG
Ga0182041_108726661	3300016294	Soil	QYVLQVIQTGSVSLGRGSPTGNIPLDQIIRAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAT
Ga0182033_105414192	3300016319	Soil	IETGSVSLPHGGSTGGNSPLDQIVQAGYAAFTSALHDALYLSAALLAGAALLSAVTLRRRRHAT
Ga0182032_100372205	3300016357	Soil	ASAALQQYVLQVIQTGSVSLGRGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAT
Ga0182034_106271312	3300016371	Soil	YVLQVIETGSISLSHSSGGSSPLDQIIQAGYAAFTGALHAALYLSAALLGAAALLSAVTLRQRRHAPRAAETVT
Ga0182034_112549422	3300016371	Soil	VSLPHGGSTGGSSPIDQLVQAGFGAFTDALHAALYLSAALVAGAALLSAVTLRQRRRWQD
Ga0182034_115142132	3300016371	Soil	ALQQYVLQVIETGSVSLPHGGSTGGNSPLDQIVQAGYAAFTSALHDALYLSAALLAGAALLSAVTLRRRRHAT
Ga0182037_112790431	3300016404	Soil	QAYVLQVIETGSISLSHSSGGSSPLDQIIQAGYAAFTGALHAALYLSAALLGAAALLSAVTLRQRRHAPRAAETVT
Ga0182039_122053012	3300016422	Soil	SLSHSSSSGGSSPLDQIIQAGYAAFTSALHAALYLSAALLAGAALLSAVTLRRRRSA
Ga0187806_10280801	3300017928	Freshwater Sediment	LRSGLVSRMTHLGASAALQQYVLQVIETGSVSLGHGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAAAALLSAITLGQRRHAT
Ga0187806_12467452	3300017928	Freshwater Sediment	MAQMTETGSASLGGSSSGGSGPLHQIIQAGYAAFTNALHAALYLSATLLATAALLSAISLRQRRRS
Ga0187814_101515991	3300017932	Freshwater Sediment	YVLQVIETGSVSLGHGTPTGNSPLDQIIRAGYAAFTGALHDALYLSAALLAGAALLSAVTLRQRRHAT
Ga0187809_101973661	3300017937	Freshwater Sediment	LQQYVLNVIETGSVSLPHGGSAGGNSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRPRRR
Ga0187819_107388871	3300017943	Freshwater Sediment	HLGASAALQQYVLQVIETGSVSLGHGSPTGNSPLDQIVRAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRHAT
Ga0187779_101496822	3300017959	Tropical Peatland	SVSLGHGGSSGGSSPLDQIIQAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAT
Ga0187783_101170945	3300017970	Tropical Peatland	SGLVSRMTHLGASTALQQYVLQVIETGSVALSHDTSAGGSSPLDQIVGAGYAAFTGALHDALYLSAALLAGAALLSAVTLRQRRLPVR
Ga0187783_104711681	3300017970	Tropical Peatland	GGSTGGSGPIAQIVQAGYTAFTNALHGALYLSAALLAGAALLAAITLGPRRAAPKHTRRGPGAP
Ga0187783_104754621	3300017970	Tropical Peatland	ETGSVALSHDTSAGGSSPLDQIVGAGYAAFTGALHDALYLSAALLVGAALLSGVTLRQRRHAA
Ga0187781_113047192	3300017972	Tropical Peatland	SVSLSHSSGGSSPLDQIIQAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRHAT
Ga0187780_100252384	3300017973	Tropical Peatland	SAALQAYVLQVIETGSVSLSHNSGGSSPLDQIIQAGYAAFTGALHAALDLSAALLAVAALLSAVTLRQRRHATS
Ga0187767_102303001	3300017999	Tropical Peatland	HLGASAALQQYVLQVIETGSVSLPHGGASTGNGPLDQIIQAGYAAFTGALHDALYLSAALLAGAALLSAITLRPRGRGSRRSRSPG
Ga0187772_111854242	3300018085	Tropical Peatland	SLGHGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRHAT
Ga0066669_106212021	3300018482	Grasslands Soil	LPHGSSTGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRH
Ga0193729_12013142	3300019887	Soil	LQVIETGSVSLPHGSSSTGNGPLDQIIQAGYAAFTGALHDALYLSAALLAGAALLSAVTLRQRRHAT
Ga0206353_119481271	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	QYVLNVIETGSVSLPHGGSAGGSSPLDQIIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRQ
Ga0210399_103206862	3300020581	Soil	ALGHGGSTGSSPLDQIIQAGYAAFTGALHDALYLSAALLAGAALLSAVTLRQRRHAT
Ga0210399_111990052	3300020581	Soil	LGASAALQQYVLQVIQTGSVSLGHGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRHGT
Ga0210399_112315451	3300020581	Soil	LPHGGSSGGSSPLDQIIQAGFAAFTGALHDALYLSAALLAAAALLSAVTLRPRRRAT
Ga0210388_112656291	3300021181	Soil	VSLGHGGSTGGSSPLDQIIQAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRHAT
Ga0213881_101425591	3300021374	Exposed Rock	QVIETGSVSLPHGGSSTGNGPLDQIIQAGFAAFTGALHDALYLSAALVAAAALLSAVTLRQRRRTALARRRS
Ga0210397_113332571	3300021403	Soil	QYVLQVIETGSVSLGHGGSTGGSSPLDQIIQAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRHAT
Ga0242657_11990772	3300022722	Soil	GSVSLPHGSSSTGNGPLDQIIQAGYAAFTGALHAALYLSAALLAAAALLSAVTLRQRRHA
Ga0247677_10028561	3300024245	Soil	VSRMTHLGATPALQQYVLNVIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRQ
Ga0207656_100368493	3300025321	Corn Rhizosphere	PALQQYVLNVIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRQ
Ga0207699_110685841	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	IETGSVSLGHGGSTGNGPLDQIIQAGYAAFTSALHAALYLSAALLAGAALLAAITLRQRRHAA
Ga0207650_106404201	3300025925	Switchgrass Rhizosphere	HLGATPALQQYVLNVIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRQ
Ga0207686_101604191	3300025934	Miscanthus Rhizosphere	QYVLNVIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRQ
Ga0207670_112340771	3300025936	Switchgrass Rhizosphere	QQYVLQVIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRQ
Ga0207667_116693742	3300025949	Corn Rhizosphere	LQQYVLQVIETGSVSLPHGGSAGGSSPLDQIIQAGFAAFTGALHSALYLSAALLAGAALLSAITLRQRRH
Ga0207648_103484523	3300026089	Miscanthus Rhizosphere	RMTHLGATPALQQYVLQVIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRQ
Ga0208761_10065692	3300026995	Soil	LVSRMTHLGASTALQQYVLNVIETGSVSLPHGGSSGGSSPLDQIIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRPRRH
Ga0208096_1066843	3300027167	Forest Soil	LQQYVLQVIETGSVPLGHGGSTGSSPLDQIIQAGYAAFTSALHDALYLSAALLAAAALLSAVTLRPRRRACQPALTGST
Ga0209448_102486731	3300027783	Bog Forest Soil	IETGSVSLGHGGSTGGNSPLDQIIQAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRHPT
Ga0307287_102098862	3300028796	Soil	QSGLVSRMTHLGASPALQQYVLQVIETGSVSLPHGGSAGGSSPLDQIIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRQRRH
Ga0311339_118497291	3300029999	Palsa	VLQVIETGSVSLGHGAASGGRSPLDQIIQAGYTAFTNALHETLYVSAALLAGAALLSAVTLRQRRHAT
Ga0265459_126343161	3300030741	Soil	ELRSGLVSRMTHLGASAALQAYVLQVIETGSVSLGHGSPTGNSPLDQIVRAGYAAFTGALHDALYLSAALLVGAALLSAVTLRPRRHAP
Ga0318534_101645744	3300031544	Soil	SAALQQYVLQVIQTGSVSLGRGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAT
Ga0318538_108365031	3300031546	Soil	SLGHGGSTGNGPLDQIIQAGYAAFTSALHAALYLSAALLAGAALLSATTLRQRRHTT
Ga0318571_103023921	3300031549	Soil	IQTGSVSLGHGSPTGNSPLDQIIQAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAA
Ga0318515_107044821	3300031572	Soil	QYVLQVIETGSVSLPHGGSTGGSSPIDQLVQAGFGAFTGALHAALYLSAALLAAAALLSAVTLRQRRHSA
Ga0310915_102869001	3300031573	Soil	TGSISLSHSSGGSSPLDQIIQAGYAAFTGALHAALYLSAALLGAAALLSAVTLRQRRHAPRAAETVT
Ga0318555_100727151	3300031640	Soil	QTGSVSLGRGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAT
Ga0318555_107053101	3300031640	Soil	MTHLGASAALQQYVLQVIETGSVSLPHGGSTGGNSPIDQLVQAGFAAFTSALHGALYLSAALVAGAALLSAVTLRRRRGAT
Ga0318561_107527392	3300031679	Soil	IETGSVSLSHSSSSGGSSPLDQIIQAGYAAFTSALHAALYLSAALLAGAALLSAVTLRRRRSA
Ga0318574_100403461	3300031680	Soil	GSVSLPHGSSSTGNGPLDQIIQAGYAAFTDALHGALYLSAALLAAAALLSAVTLRSRRRP
Ga0318572_103050951	3300031681	Soil	VSLSHSSSSGGSSPLDQIIQAGYAAFTSALHAALYLSAALLAGAALLSAVTLRRRRSA
Ga0310686_1017320524	3300031708	Soil	VIETGSVSLGHGGSTGNSPLDQIIQAGYAAFTSALHDALYLSAALLVGAALLSAVTLRQRRQAT
Ga0310686_1058286541	3300031708	Soil	VLQVIETGSVSLGHGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAGAAVLSAVTLRQRHVT
Ga0318496_104465822	3300031713	Soil	LQVIETGSVSLPHGGSTGGSSPIDQLVQAGFGAFTGALHAALYLSAALLAAAALLSAVTLRQRRHSA
Ga0307474_113393401	3300031718	Hardwood Forest Soil	VSLGHGGSTGSSPLDQIIQAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRHAT
Ga0306917_112859431	3300031719	Soil	NAELRSGLVSRMTHLGASAALQQYVLQVIQTGSVSLGHGSPTGNSPLDQIIQAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAA
Ga0318493_101096981	3300031723	Soil	QVIQTGSVSLGRGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAT
Ga0318500_104591471	3300031724	Soil	SLPHGGSTGGNSPIDQLVQAGFAAFTSALHGALYLSAALVAGAALLSAVTLRRRRGAT
Ga0306918_111121162	3300031744	Soil	TGSVSLPHGGSTGGSSPIDQLVQAGFGAFTDALHAALYLSAALVAGAALLSAVTLRQRRRWQD
Ga0318502_100081601	3300031747	Soil	AALQQYVLQVIQTGSVSLGRGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAT
Ga0318492_100156901	3300031748	Soil	YVLQVIQTGSVSLGRGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAT
Ga0318492_103565022	3300031748	Soil	VIETGSVSLPHGGSSGGSSPLDQIIQAGFAAFTGALHDALYLSAALLAAAALLSAVTLRQRRRAT
Ga0318494_100042231	3300031751	Soil	SRMTHLGASAALQQYVLQVIQTGSVSLGRGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAT
Ga0307477_104315643	3300031753	Hardwood Forest Soil	YVLQVIETGSVSLGHGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRHAT
Ga0318554_108106312	3300031765	Soil	GLVSRMTHLGASAALQQYVLQVIETGSVSLGHGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAGAALLSAVTLRERRHAT
Ga0318554_108433051	3300031765	Soil	SGVVSRMTHLGASAALQQYVLQVIETGSVSLPHGGSTGGNSPIDQLVQAGFAAFTSALHGALYLSAALVAGAALLSAVTLRRRRGAT
Ga0318526_103308762	3300031769	Soil	GSISLSHSSGGSSPLDQIIQAGYAAFTGALHAALYLSAALLGAAALLSAVTLRQRRHAPRAAETVT
Ga0318521_107645642	3300031770	Soil	HLGASAALQQYVLQVIQTGSVSLGHGSPTGNSPLDQIIQAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAA
Ga0318521_109646451	3300031770	Soil	VLQVIETGSVSLGHGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRHAI
Ga0318546_106816183	3300031771	Soil	YVLQVIETGSVSLPHGGSTGGNSPIDQLVQAGFAAFTSALHGALYLSAALVAGAALLSAVTLRRRRGAT
Ga0318546_111342011	3300031771	Soil	VSRMTHLGASAALQQYVLQVIQTGSVSLGRGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAT
Ga0318547_109027971	3300031781	Soil	LGASTALQQYVLQVIETGSVSLPHGGSAGGSSPLDQIIQAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRRPA
Ga0318557_102495051	3300031795	Soil	VIETGSVSLPHGSSSTGNGPLDQIIQAGYAAFTDALHGALYLSAGLLAAAALLSAIALRGRRHAN
Ga0318550_102643142	3300031797	Soil	TGSVSLGHGGSTGNGPLDQIIQAGYAAFTSALHAALYLSAALLAGAALLSATTLRQRRHT
Ga0318497_104406342	3300031805	Soil	ETGSVSLPHGGSTGGSSPIDQLVQAGFGAFTSALHDALYLSAALLAGAALLSAVTLRRRRHAA
Ga0318568_105216622	3300031819	Soil	LRSGLVSRMTHLGASAALQQYVLQVIETGSVSLPHGGASTGNGPLDQIIQAGYAAFTGALHDALYLSAALLAGAALLSAVTLRPRRRPA
Ga0318567_107029351	3300031821	Soil	MTHLGASAALQQYVLQVIETGSVSLGHGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRHAI
Ga0318567_107799072	3300031821	Soil	ALQQYVLQVIETGSVSLPHGGSSGGSSPLDQIIQAGFAAFTGALHDALYLSAALLAAAALLSAVTLRQRPRTT
Ga0318564_104991381	3300031831	Soil	QVIQTGSVSLGHGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRHAA
Ga0318517_100322433	3300031835	Soil	ASTALQQYVLQVIETGSVSLPHGGSAGGSSPLDQIIQAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRRPA
Ga0306923_103244611	3300031910	Soil	MTHLGASAALQQYVLQVIQTGSVSLGRGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAT
Ga0306921_106151111	3300031912	Soil	PHGGSTGGSSPIDQLVQAGFGAFTDALHAALYLSAALVAGAALLSAVTLRQRRRWQD
Ga0310916_113624831	3300031942	Soil	THLGASAALQQYVLQVIETGSVSLGHGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRHAI
Ga0310910_105366741	3300031946	Soil	LGASAALQQYVLQVIQTGSVSLGRGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAT
Ga0310909_100926643	3300031947	Soil	QQYVLQVIETGSVSLPHGGSTGGNSPLDQIVQAGYAAFTSALHDALYLSAALLAGAALLSAVTLRRRRHAT
Ga0318531_104713461	3300031981	Soil	TGSISLSHSSGGSSPLDQIVQAGYAAFTGALHAALYLSAALLGAAALLSAVTLRQRRHAPRAAETVT
Ga0306922_101926744	3300032001	Soil	SRMTHLGASTALQQYVLQVIETGSVSLPHGGSAGGSSPLDQIIQAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRRPA
Ga0318562_102158801	3300032008	Soil	HLGASTALQQYVLQVIQTGSVSLGHGNPTGNSPLDQIVQAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAT
Ga0318549_101993192	3300032041	Soil	SVSLPHGGSAGGSSPLDQIIQAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRRPA
Ga0318570_101125652	3300032054	Soil	LQQYVLQVIETGSVSLPHGGSAGGNSPLDQIIQAGYAAFTSALHDALYLSAALLAGAALLSAVTLRRRRHAT
Ga0318504_104278492	3300032063	Soil	SLPHGGSAGGSSPLDQIIQAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRRPA
Ga0318504_106398781	3300032063	Soil	VVNAELRSGLVSRMTHLGASAALQQYVLQVIQTGSVSLGRGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAT
Ga0318514_100162629	3300032066	Soil	LQVIQTGSVSLGRGSPTGNSPLDQIIRAGYAAFTSALHDALYLSAALLAAAALLSAVTLRQRRHAT
Ga0318524_100563483	3300032067	Soil	HLGASTALQQYVLQVIETGSVSLPHGGSAGGSSPLDQIIQAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRRPA
Ga0306924_110558952	3300032076	Soil	GASTALQQYVLQVIETGSVSLPHGGSAGGSSPLDQIIQAGYAAFTSALHDALYLSAALLAGAALLSAVTLRQRRRPA
Ga0318525_106061521	3300032089	Soil	IETGSVSLGHGGSTGNGPLDQIIQAGYAAFTSALHAALYLSAALLAGAALLSATTLRQRRHTT
Ga0318518_104905722	3300032090	Soil	IETGSVSLPHGGSTGGSSPIDQLVQAGFGAFTDALHAALYLSAALVAGAALLSAVTLRQRRRWQD
Ga0335070_109178981	3300032829	Soil	LGASAALQQYVLQVIETGSVSLPHGGAGTGNGPLDQIIQAGYAAFTGALHDALYLSAALLAAAALLSAVTLRQRRAS
Ga0335081_120552812	3300032892	Soil	ETGSVSLPHGGSTGGSDPIDQLVQAGFASFTGALHAALYLSAALLGAAAALSAVTLRARRHTG
Ga0335073_102702703	3300033134	Soil	RMTHLGATPALQQYVLNVIETGSVSLPHGGSAGGSSPIDQLIQAGFAAFTGALHSALYLSAALLAGAALLSAVTLRPSRQ
Ga0335077_104764221	3300033158	Soil	IETGSVALGHGTPTGNSPLDQIVRAGYSAFTGALHDALYLSAALLACAALLSAVTLRQRGPAS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058336

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences