Metagenome Family F058344

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058344
Family Type	Metagenome
Number of Sequences	135
Average Sequence Length	50 residues
Representative Sequence	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLRERFRR
Number of Associated Samples	106
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.89 %
% of genes near scaffold ends (potentially truncated)	69.63 %
% of genes from short scaffolds (< 2000 bps)	91.11 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (62.222 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (16.296 % of family members)
Environment Ontology (ENVO)	Unclassified (31.852 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.370 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 1.96% β-sheet: 1.96% Coil/Unstructured: 96.08%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF13302	Acetyltransf_3	5.19
PF12680	SnoaL_2	4.44
PF03544	TonB_C	2.96
PF00583	Acetyltransf_1	2.22
PF06441	EHN	1.48
PF13643	DUF4145	1.48
PF12146	Hydrolase_4	1.48
PF13840	ACT_7	1.48
PF07617	DUF1579	0.74
PF00582	Usp	0.74
PF00850	Hist_deacetyl	0.74
PF00535	Glycos_transf_2	0.74
PF13430	DUF4112	0.74
PF01471	PG_binding_1	0.74
PF00067	p450	0.74
PF12773	DZR	0.74
PF13673	Acetyltransf_10	0.74
PF13884	Peptidase_S74	0.74
PF08592	Anthrone_oxy	0.74
PF00753	Lactamase_B	0.74
PF02518	HATPase_c	0.74
PF00291	PALP	0.74
PF10502	Peptidase_S26	0.74
PF01513	NAD_kinase	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	2.96
COG0123	Acetoin utilization deacetylase AcuC or a related deacetylase	Secondary metabolites biosynthesis, transport and catabolism [Q]	1.48
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	1.48
COG2124	Cytochrome P450	Defense mechanisms [V]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.22 %
Unclassified	root	N/A	37.78 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.22 %
Unclassified	root	N/A	37.78 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.22 %
Unclassified	root	N/A	37.78 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.78 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	35.56 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.48 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.74 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.78 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	35.56 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.74 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.74 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.74 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.78 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	28.15 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	2.22 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.74 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	28.15 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	1.48 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.74 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	28.15 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	1.48 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	28.15 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1.48 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.78 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	28.15 %
Candidatus Udaeobacter copiosus	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	0.74 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.74 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.74 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.74 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.74 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.74 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459013\|GO6OHWN02HFK7F	Not Available	507	Open in IMG/M
2189573002\|GZIGXIF01BXJ7J	Not Available	514	Open in IMG/M
3300000881\|JGI10215J12807_1035651	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	670	Open in IMG/M
3300000955\|JGI1027J12803_104619176	Not Available	1408	Open in IMG/M
3300002126\|JGI24035J26624_1034815	Not Available	555	Open in IMG/M
3300004633\|Ga0066395_10806368	Not Available	564	Open in IMG/M
3300005179\|Ga0066684_10275358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1112	Open in IMG/M
3300005187\|Ga0066675_10636321	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	801	Open in IMG/M
3300005332\|Ga0066388_100314297	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2212	Open in IMG/M
3300005332\|Ga0066388_100499685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1852	Open in IMG/M
3300005332\|Ga0066388_100875111	Not Available	1480	Open in IMG/M
3300005332\|Ga0066388_101156640	All Organisms → cellular organisms → Bacteria	1317	Open in IMG/M
3300005332\|Ga0066388_103555678	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	795	Open in IMG/M
3300005332\|Ga0066388_106833980	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300005332\|Ga0066388_108480811	Not Available	512	Open in IMG/M
3300005340\|Ga0070689_101175645	Not Available	688	Open in IMG/M
3300005356\|Ga0070674_101490678	Not Available	608	Open in IMG/M
3300005434\|Ga0070709_11533825	Not Available	541	Open in IMG/M
3300005436\|Ga0070713_100305507	All Organisms → cellular organisms → Bacteria	1466	Open in IMG/M
3300005439\|Ga0070711_100618016	All Organisms → cellular organisms → Bacteria	905	Open in IMG/M
3300005457\|Ga0070662_100732914	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	837	Open in IMG/M
3300005526\|Ga0073909_10662085	Not Available	521	Open in IMG/M
3300005554\|Ga0066661_10681456	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300005560\|Ga0066670_10833398	Not Available	560	Open in IMG/M
3300005598\|Ga0066706_10863149	Not Available	708	Open in IMG/M
3300005713\|Ga0066905_101767760	Not Available	569	Open in IMG/M
3300005764\|Ga0066903_101910707	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1137	Open in IMG/M
3300005764\|Ga0066903_103540393	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	841	Open in IMG/M
3300005764\|Ga0066903_104341084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	758	Open in IMG/M
3300005764\|Ga0066903_107439604	All Organisms → cellular organisms → Bacteria	565	Open in IMG/M
3300006046\|Ga0066652_101810162	Not Available	551	Open in IMG/M
3300006175\|Ga0070712_100605731	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	927	Open in IMG/M
3300006175\|Ga0070712_101276787	Not Available	639	Open in IMG/M
3300006852\|Ga0075433_11914843	Not Available	509	Open in IMG/M
3300006854\|Ga0075425_100644681	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1217	Open in IMG/M
3300006871\|Ga0075434_102310956	Not Available	540	Open in IMG/M
3300006893\|Ga0073928_10000026	All Organisms → cellular organisms → Bacteria	357278	Open in IMG/M
3300007076\|Ga0075435_101644193	Not Available	563	Open in IMG/M
3300007788\|Ga0099795_10652027	Not Available	504	Open in IMG/M
3300009012\|Ga0066710_100183951	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2955	Open in IMG/M
3300009012\|Ga0066710_101429944	Not Available	1071	Open in IMG/M
3300009147\|Ga0114129_11836596	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	736	Open in IMG/M
3300009174\|Ga0105241_10972693	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	792	Open in IMG/M
3300009177\|Ga0105248_10718443	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1127	Open in IMG/M
3300010042\|Ga0126314_10714752	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	735	Open in IMG/M
3300010043\|Ga0126380_10493898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	937	Open in IMG/M
3300010047\|Ga0126382_10005064	All Organisms → cellular organisms → Bacteria	5905	Open in IMG/M
3300010048\|Ga0126373_10592728	Not Available	1160	Open in IMG/M
3300010323\|Ga0134086_10130054	Not Available	908	Open in IMG/M
3300010358\|Ga0126370_11056239	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	745	Open in IMG/M
3300010358\|Ga0126370_11595047	Not Available	624	Open in IMG/M
3300010359\|Ga0126376_12920912	Not Available	527	Open in IMG/M
3300010360\|Ga0126372_10111789	All Organisms → cellular organisms → Bacteria	2085	Open in IMG/M
3300010360\|Ga0126372_10606883	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1051	Open in IMG/M
3300010361\|Ga0126378_10730696	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1101	Open in IMG/M
3300010361\|Ga0126378_10938758	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	971	Open in IMG/M
3300010361\|Ga0126378_12932704	Not Available	544	Open in IMG/M
3300010362\|Ga0126377_10365110	All Organisms → cellular organisms → Bacteria	1444	Open in IMG/M
3300010366\|Ga0126379_10497368	Not Available	1290	Open in IMG/M
3300010366\|Ga0126379_12312127	Not Available	638	Open in IMG/M
3300010366\|Ga0126379_12486336	Not Available	617	Open in IMG/M
3300010366\|Ga0126379_13245063	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	545	Open in IMG/M
3300010398\|Ga0126383_10107436	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2510	Open in IMG/M
3300012200\|Ga0137382_10488926	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	873	Open in IMG/M
3300012202\|Ga0137363_10350931	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	1221	Open in IMG/M
3300012208\|Ga0137376_10695168	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	877	Open in IMG/M
3300012209\|Ga0137379_10201261	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	1904	Open in IMG/M
3300012350\|Ga0137372_10651402	All Organisms → cellular organisms → Bacteria	767	Open in IMG/M
3300012362\|Ga0137361_11170404	Not Available	691	Open in IMG/M
3300012923\|Ga0137359_10806817	Not Available	813	Open in IMG/M
3300012925\|Ga0137419_11367434	Not Available	597	Open in IMG/M
3300012948\|Ga0126375_11442247	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	585	Open in IMG/M
3300012948\|Ga0126375_11619987	Not Available	558	Open in IMG/M
3300012957\|Ga0164303_10863123	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	630	Open in IMG/M
3300012971\|Ga0126369_10345761	All Organisms → cellular organisms → Bacteria	1507	Open in IMG/M
3300012971\|Ga0126369_11895473	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300012971\|Ga0126369_12286798	Not Available	627	Open in IMG/M
3300012984\|Ga0164309_11467732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	583	Open in IMG/M
3300012985\|Ga0164308_11121574	All Organisms → cellular organisms → Bacteria	706	Open in IMG/M
3300012985\|Ga0164308_12182212	Not Available	516	Open in IMG/M
3300013296\|Ga0157374_10069612	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus	3313	Open in IMG/M
3300013296\|Ga0157374_10504967	All Organisms → cellular organisms → Bacteria	1214	Open in IMG/M
3300013764\|Ga0120111_1130589	Not Available	581	Open in IMG/M
3300014745\|Ga0157377_10191173	All Organisms → cellular organisms → Bacteria	1294	Open in IMG/M
3300014969\|Ga0157376_10440310	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300015356\|Ga0134073_10322844	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	558	Open in IMG/M
3300015371\|Ga0132258_10541229	All Organisms → cellular organisms → Bacteria	2917	Open in IMG/M
3300015372\|Ga0132256_101777937	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	725	Open in IMG/M
3300015373\|Ga0132257_100903313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1107	Open in IMG/M
3300015374\|Ga0132255_101003385	All Organisms → cellular organisms → Bacteria	1252	Open in IMG/M
3300015374\|Ga0132255_101056153	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1220	Open in IMG/M
3300016270\|Ga0182036_10488750	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	973	Open in IMG/M
3300016294\|Ga0182041_10706252	Not Available	894	Open in IMG/M
3300016371\|Ga0182034_10095863	Not Available	2111	Open in IMG/M
3300016387\|Ga0182040_10135893	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1730	Open in IMG/M
3300018431\|Ga0066655_10431992	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	869	Open in IMG/M
3300018433\|Ga0066667_11017708	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	715	Open in IMG/M
3300018433\|Ga0066667_11854915	Not Available	548	Open in IMG/M
3300019877\|Ga0193722_1001392	All Organisms → cellular organisms → Bacteria	5647	Open in IMG/M
3300019886\|Ga0193727_1047512	Not Available	1397	Open in IMG/M
3300021344\|Ga0193719_10226140	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300022557\|Ga0212123_10000630	All Organisms → cellular organisms → Bacteria	110852	Open in IMG/M
3300022898\|Ga0247745_1023537	All Organisms → cellular organisms → Bacteria	892	Open in IMG/M
3300024222\|Ga0247691_1077149	Not Available	504	Open in IMG/M
3300024288\|Ga0179589_10085286	All Organisms → cellular organisms → Bacteria	1265	Open in IMG/M
3300025905\|Ga0207685_10119399	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1155	Open in IMG/M
3300025917\|Ga0207660_10314048	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1250	Open in IMG/M
3300025930\|Ga0207701_10224597	All Organisms → cellular organisms → Bacteria	1644	Open in IMG/M
3300025930\|Ga0207701_10254806	All Organisms → cellular organisms → Bacteria	1531	Open in IMG/M
3300025931\|Ga0207644_10168782	All Organisms → cellular organisms → Bacteria	1707	Open in IMG/M
3300025936\|Ga0207670_10186529	All Organisms → cellular organisms → Bacteria	1566	Open in IMG/M
3300025938\|Ga0207704_11375532	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	604	Open in IMG/M
3300025944\|Ga0207661_10610663	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1001	Open in IMG/M
3300025945\|Ga0207679_11208502	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	694	Open in IMG/M
3300026088\|Ga0207641_10445354	All Organisms → cellular organisms → Bacteria	1251	Open in IMG/M
3300026334\|Ga0209377_1041989	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2098	Open in IMG/M
3300031057\|Ga0170834_105168071	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1118	Open in IMG/M
3300031231\|Ga0170824_121968999	Not Available	533	Open in IMG/M
3300031469\|Ga0170819_13550168	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300031469\|Ga0170819_17655107	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300031474\|Ga0170818_102903568	Not Available	532	Open in IMG/M
3300031720\|Ga0307469_10407161	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1163	Open in IMG/M
3300031720\|Ga0307469_11238244	Not Available	707	Open in IMG/M
3300031740\|Ga0307468_100645147	Not Available	874	Open in IMG/M
3300031740\|Ga0307468_101127107	Not Available	701	Open in IMG/M
3300031854\|Ga0310904_10484530	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	827	Open in IMG/M
3300031890\|Ga0306925_12110520	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	527	Open in IMG/M
3300031946\|Ga0310910_10914550	Not Available	688	Open in IMG/M
3300032059\|Ga0318533_10556340	Not Available	841	Open in IMG/M
3300032174\|Ga0307470_10598177	Not Available	824	Open in IMG/M
3300032180\|Ga0307471_101580159	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	812	Open in IMG/M
3300032205\|Ga0307472_100591353	Not Available	977	Open in IMG/M
3300032261\|Ga0306920_100429835	All Organisms → cellular organisms → Bacteria	1963	Open in IMG/M
3300032421\|Ga0310812_10310723	Not Available	702	Open in IMG/M
3300033433\|Ga0326726_10230166	All Organisms → cellular organisms → Bacteria	1720	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	82.96%
Host-Associated	Host-Associated	17.04%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.48%
Plants	Host-Associated → Plants	17.04%
Aquatic	Environmental → Aquatic	1.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.85%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.19%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.48%
Peat	Environmental → Terrestrial → Peat	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	63.70%
Loam	Environmental → Terrestrial → Soil → Loam	17.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.15%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.70%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.96%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.33%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	15.56%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.59%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.63%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.15%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.41%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.22%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.96%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.74%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.74%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.74%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	16.30%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	9.63%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.93%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.19%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.44%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.44%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.22%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.96%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.96%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.48%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.48%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.48%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.48%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.48%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.74%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.74%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.74%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.74%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.74%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459013	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO 1O1 lysis soil at the rocks surface 0-21cm	Environmental	Open in IMG/M
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002126	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5	Host-Associated	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022898	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S109-311C-5	Environmental	Open in IMG/M
3300024222	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK32	Environmental	Open in IMG/M
3300024288	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N57_03656740	2170459013	Grass Soil	MVAGFYGSRRSAIELPGGINDSSCHEKVDYSCFSALCSGDGAGFLRERFRR
FE1_02866440	2189573002	Grass Soil	ELPGGVNDSSCHEKVDYSYFSALYSGNGAGFLRERFRR
JGI10215J12807_10356511	3300000881	Soil	MVAGFYGSRRSAIELPGDVNDSFRHEKVDYSCFSALCSGDGAGFLRE
JGI1027J12803_1046191764	3300000955	Soil	MVAGFYGSRLSAIELPGGVNDSSCHEKVDYSCFSALCGGDDAGFLRERFQR*
JGI24035J26624_10348152	3300002126	Corn, Switchgrass And Miscanthus Rhizosphere	AIELPGGVNDSSCHEKVDYSCFSVLCSGDGAGFLRERFRR*
Ga0066395_108063681	3300004633	Tropical Forest Soil	MWHVVFYEILCAHFTHQKMVAGCYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFRR*
Ga0066684_102753581	3300005179	Soil	AHFTHQKMVAGFYGSRRSAIELPGAVNDSSCHEKVDYSCFSALCSGDGAGFVRERFRR*
Ga0066675_106363211	3300005187	Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFQR*
Ga0066388_1003142974	3300005332	Tropical Forest Soil	MTYIFYGILCAHFTHQKKVAGFYASRRAAIELPGGVNDSSCHEKVDYFCFSALCSGDGPGFLREQFGR*
Ga0066388_1004996853	3300005332	Tropical Forest Soil	MVAGFYGSRRSAIELPDGVNDSSCHEKVDYSCFSALCSGDGAGFLRERFRR*
Ga0066388_1008751111	3300005332	Tropical Forest Soil	RSAIELPGGVNDSSCHEKVDYSCFSALSSGDGAGFLRERFRR*
Ga0066388_1011566401	3300005332	Tropical Forest Soil	RSAIELPGGVNDSSCHEKVDYACFSALCIGDGVGFLRERFRR*
Ga0066388_1035556782	3300005332	Tropical Forest Soil	MVAGFYGSRRSAIELPGGVNDSSRHEKVDYSCFSALCSGDGAGFLRERFRR*
Ga0066388_1068339801	3300005332	Tropical Forest Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAG
Ga0066388_1084808111	3300005332	Tropical Forest Soil	HQKMVAGFYGSRRSAIELRGGVNDSSGHEKVDHSCFSALCSGDGAGFLREPLRRSFPS*
Ga0070689_1011756451	3300005340	Switchgrass Rhizosphere	QKMVAGFYGSRRSAIELPGGVNDSSCHEKVHYSCFGALCSGDGAGFLRERFRR*
Ga0070674_1014906781	3300005356	Miscanthus Rhizosphere	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLR
Ga0070709_115338251	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	HIVFYGILCAHFTHQKMVAGFYGSRRSAIELPGDVNDSSCHEKVDYSCFGALCSGDGAGFLRERFRR*
Ga0070713_1003055073	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	QKMVAGFYGSRRSAIELPGDVNDSSCHEKVDYSCFGALCSGNGACFVRERFRR*
Ga0070711_1006180162	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	VAHFTHQKMVAGFYDSRRSAIELPGGVNDSSCHEKVDYSCFGALCSGDGAGFLREPFRR*
Ga0070662_1007329142	3300005457	Corn Rhizosphere	MVAGFYGSRRSAIESPGGVNDSSCHEKVDYSCFSALCIDDGAGFLRERFRR*
Ga0073909_106620851	3300005526	Surface Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFRR*
Ga0066661_106814562	3300005554	Soil	FYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFVRERFRR*
Ga0066670_108333981	3300005560	Soil	ILCAHFTHQKMVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFLR*
Ga0066706_108631491	3300005598	Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLRERFQR*
Ga0066905_1017677602	3300005713	Tropical Forest Soil	GFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCIGDGAGFLRERFQR*
Ga0066903_1019107071	3300005764	Tropical Forest Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGF
Ga0066903_1035403932	3300005764	Tropical Forest Soil	MVAGYCGSRRSAIELPVGVNDSSSHEKVDYSCFSALCSGDGAGFLREQFQR*
Ga0066903_1043410841	3300005764	Tropical Forest Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVVYSCFSAVCSADGDGFLRERFRR*
Ga0066903_1074396042	3300005764	Tropical Forest Soil	QKMVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCNGDGAGFLRERFQC*
Ga0066652_1018101622	3300006046	Soil	QKMVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFLR*
Ga0070712_1006057312	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	SAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFVRERFRR*
Ga0070712_1012767871	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	IELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREPFRR*
Ga0075433_119148431	3300006852	Populus Rhizosphere	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCGGDVADILSERFQC*
Ga0075425_1006446813	3300006854	Populus Rhizosphere	SAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFRR*
Ga0075434_1023109561	3300006871	Populus Rhizosphere	GGVNDSSCHEKVDYSCFSALCSGDGAGFLRERFRR*
Ga0073928_1000002662	3300006893	Iron-Sulfur Acid Spring	MVAGFYGSRRSAIELPGGVDDSSSHEKVDYSCFSALCSGDGAGFLREQFLR*
Ga0075435_1016441931	3300007076	Populus Rhizosphere	SRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLRERFRR*
Ga0099795_106520272	3300007788	Vadose Zone Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFLR*
Ga0066710_1001839515	3300009012	Grasslands Soil	HQKMVAGFYGSRRSAIELPGGVNDSSRHEKVHYSCFSALCSGDGAGFLRERFRR
Ga0066710_1014299441	3300009012	Grasslands Soil	MHQKMVAGFYGSRRSAIELPGGVNDSSRHEKVHYSCFSALC
Ga0114129_118365961	3300009147	Populus Rhizosphere	MVAGFYGSRRSAIELLGGVNDSSCHEKVDYSSFSALCSGDGAGF
Ga0105241_109726932	3300009174	Corn Rhizosphere	IELPGGVNDSSCHEKVDYSCFSALRSGDGAGFLREQFLRGSFPS*
Ga0105248_107184433	3300009177	Switchgrass Rhizosphere	MLCAHFTHQKMVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLRERFRR*
Ga0126314_107147522	3300010042	Serpentine Soil	YGSRRSAIELPGGVNDSSCHEKVDYFCFRTFCSDDVAGFLREQFRR*
Ga0126380_104938981	3300010043	Tropical Forest Soil	MVAGFYGSRRSAIESPGGVNDSSCDEKVDYSCFSAL
Ga0126382_100050649	3300010047	Tropical Forest Soil	MVRARLYGARRCVIELPGGVNDSSCHEKVDYSCFSALCSGDG
Ga0126373_105927281	3300010048	Tropical Forest Soil	MVAGFYGSRRSAIELRGGVNDSSGHEKVDHSCFSALCSGDGAGFLREPL*
Ga0134086_101300542	3300010323	Grasslands Soil	MHQKMVAGFYGSRRSAIELPGGVNDSSRHEKVHYSCFSALCSGDGAGFLRERFQR*
Ga0126370_110562392	3300010358	Tropical Forest Soil	VFTLHIVFYGILCAHFTHQKMVAGYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFLQ*
Ga0126370_115950471	3300010358	Tropical Forest Soil	MVAGFYGSRRSAIELPGGVNDSSRHEKVDYSCFSALCSGDGAGFLREQFRR*
Ga0126376_129209122	3300010359	Tropical Forest Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALRSGDGAGFLREQFRR*
Ga0126372_101117892	3300010360	Tropical Forest Soil	MVAGFYGSPRSAIELPGGVNDSSCHEKVDYSCFSALRSGDGAGFLREQFRR*
Ga0126372_106068832	3300010360	Tropical Forest Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYFCFSALCSGDGAGFLRERFRR*
Ga0126378_107306961	3300010361	Tropical Forest Soil	MVARFYGSRRSAIELPGGVNDSSCHEKVDYSCFSAL
Ga0126378_109387582	3300010361	Tropical Forest Soil	YGSRRSAIELPGGVNDSSCHEKVDYSCFSALCNGDGAGFLREQFRR*
Ga0126378_129327041	3300010361	Tropical Forest Soil	MIAGFYGSRRSAIELPGGVNDSPCHEKVDYSRFSALCSGDGAGFLRERFL*
Ga0126377_103651101	3300010362	Tropical Forest Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSG
Ga0126379_104973681	3300010366	Tropical Forest Soil	LYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLRERFRR*
Ga0126379_123121271	3300010366	Tropical Forest Soil	ELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFLR*
Ga0126379_124863361	3300010366	Tropical Forest Soil	RRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGASFLRERFRR*
Ga0126379_132450632	3300010366	Tropical Forest Soil	MPLTYGARRSAIELPGGVNDSFCHEKVDYSCFSALCSGDGAGFLRERFR*
Ga0126383_101074361	3300010398	Tropical Forest Soil	RSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFLQ*
Ga0137382_104889262	3300012200	Vadose Zone Soil	MTYSFYGILCAHFTHQKMVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFLR*
Ga0137363_103509311	3300012202	Vadose Zone Soil	AHFTHQKMVAGFYGSRRSAIELPGGVNDSSRHEKVHYSCFSALCSGDGAGFLRERFRR*
Ga0137376_106951681	3300012208	Vadose Zone Soil	HIVFYGILCAHFTHQKMVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFLR*
Ga0137379_102012613	3300012209	Vadose Zone Soil	MVAGFYGSRRSAIELPGGVNDSSRHEKVHYSCFSALCSGDGAGFVRERFQR*
Ga0137372_106514022	3300012350	Vadose Zone Soil	MCAHFTHQKMVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFVRERFRR
Ga0137361_111704043	3300012362	Vadose Zone Soil	GFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFLR*
Ga0137359_108068171	3300012923	Vadose Zone Soil	GSRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFLR*
Ga0137419_113674341	3300012925	Vadose Zone Soil	MHQKMVAGFYGSRRSAIELPGGVNDSSCHEKVHYSCFSALCIGNGAGFLRERFRR*
Ga0126375_114422471	3300012948	Tropical Forest Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCIGDGAG
Ga0126375_116199871	3300012948	Tropical Forest Soil	YGSRRSAIELPGGVNDSSCHEKVDYSCFNALCSGDGAGFLREQFRR*
Ga0164303_108631231	3300012957	Soil	LPGGVNDSSCHEKIDYSCFSALCSGDGAGFLRERFRR*
Ga0126369_103457613	3300012971	Tropical Forest Soil	ELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFRR*
Ga0126369_118954731	3300012971	Tropical Forest Soil	MPLTYGARRSAIELPGGVNDSFCHEKVDYSCFSALCSGDGAGFLRE
Ga0126369_122867982	3300012971	Tropical Forest Soil	IELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLRERFQR*
Ga0164309_114677321	3300012984	Soil	PIVFYGILCAHFTHHKMVAGFYGSRRSAIELPGGINDSSCHEKVDYSCFSALFSSDGAGFVRERFRR*
Ga0164308_111215742	3300012985	Soil	MVFHGILCAHFTHQKMVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREPFRR*
Ga0164308_121822121	3300012985	Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFL
Ga0157374_100696121	3300013296	Miscanthus Rhizosphere	GVNDSSCHEKVDYSCFSALCSGDGAGFLRERFRR*
Ga0157374_105049671	3300013296	Miscanthus Rhizosphere	MVARFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALC
Ga0120111_11305891	3300013764	Permafrost	MCAHFTHQEMVAGFYGSRRSAVELRGGVNDSSCHEKVDYSCFSALCSGDGAGFLRERFRR
Ga0157377_101911732	3300014745	Miscanthus Rhizosphere	MVAGFYGSRRSAIELPGGVNDSSCHEKVHYSCFGALCNGDGAGFVRERFRR*
Ga0157376_104403101	3300014969	Miscanthus Rhizosphere	QKMFASFYDSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLRQQFRR*
Ga0134073_103228441	3300015356	Grasslands Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDSFCFSALCSGDGAGFLRERFQR*
Ga0132258_105412291	3300015371	Arabidopsis Rhizosphere	HQKMVAGFYDSRRSAIELPGGVNDSSCHEKVDYSCFGALCSGDGAGFLREPFRR*
Ga0132256_1017779372	3300015372	Arabidopsis Rhizosphere	AIELPGGVNDSSCHEKVDYSCFSALCSGDGTGFLREPFRR*
Ga0132257_1009033131	3300015373	Arabidopsis Rhizosphere	RRSAIELPGGVNDSSCHEKVDYSCFSALCSGDSAGFVRERFRR*
Ga0132255_1010033853	3300015374	Arabidopsis Rhizosphere	GFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALRSGDGAGFLREQFLRGSFPS*
Ga0132255_1010561531	3300015374	Arabidopsis Rhizosphere	MVAGFYGSRRSAIESPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQF
Ga0182036_104887501	3300016270	Soil	MVAGFYGSRRFPIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQ
Ga0182041_107062522	3300016294	Soil	SAIELPGGVNDSSCHEKVDYSCFSALCIGDGAGFLRERFRR
Ga0182034_100958631	3300016371	Soil	MVVGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQLRRSFPS
Ga0182040_101358933	3300016387	Soil	VAHFTHQKMVAGFYGSRRFPIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQVRRSFPS
Ga0066655_104319921	3300018431	Grasslands Soil	GSRRSAIELPGGVNDSSCHEKVDYSCFSALCNGDGAGFLRERFRR
Ga0066667_110177081	3300018433	Grasslands Soil	ILCAHFTHQKMVAGFYGSRRSAIELSGGVNDSSRHEKVDYSCFSALCSGDGAGFLRKQFL
Ga0066667_118549152	3300018433	Grasslands Soil	MIAGFYGSPRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLRERFRR
Ga0193722_10013923	3300019877	Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFLR
Ga0193727_10475122	3300019886	Soil	HEKVVAGFYGSRRSAIELPGGVNDSSCHEKVDYTCFSARCSGDGAGFLRERFRR
Ga0193719_102261401	3300021344	Soil	VVAGFYGSRRSAIELPGGVNDSSSHEKVDYSCFSALCSG
Ga0212123_1000063046	3300022557	Iron-Sulfur Acid Spring	MVAGFYGSRRSAIELPGGVDDSSSHEKVDYSCFSALCSGDGAGFLREQFLR
Ga0247745_10235371	3300022898	Soil	LYTTYRFYGILCAHFTHQEMVAGFYGSRRSAVELPGGVNDSSSHEKVDYSCFSALCSGDGAGFLRQQFRR
Ga0247691_10771491	3300024222	Soil	MVAGFYGSRRSAIELPGDVNDSSCHEKVDYSCFSALCSGDGAGFLREQFRR
Ga0179589_100852861	3300024288	Vadose Zone Soil	THQKVVAGFYGSRRSAIELPGDVNDSSCHEKVDYSCFSALCSGDGAGFLREQFRR
Ga0207685_101193991	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	SDFIRHIVFYGILCAHFTHQKMVAGFYGSRRSAIEFPGGVNDSSCHEKVDYPCFSALCSGDGAGFVRERFRR
Ga0207660_103140482	3300025917	Corn Rhizosphere	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFGALCSGDGAGFLRERFRR
Ga0207701_102245971	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	IELPGGVNDSSCHEKVDYSCFSALWSGDGAGFLRERFRR
Ga0207701_102548061	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MVARFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLRERFR
Ga0207644_101687821	3300025931	Switchgrass Rhizosphere	IELPGDVNDSSRHEKVDYSCFSALCSGDGAGFLRERFRR
Ga0207670_101865293	3300025936	Switchgrass Rhizosphere	IELPGDVNDSSCHEKVDYSCFSALCSGDGAGFLRERFRR
Ga0207704_113755322	3300025938	Miscanthus Rhizosphere	LISDALRSTISARFYGSRRSAIELPGGVNDSSCHEKVDYSCFGALCSGDGAGFLREPFRR
Ga0207661_106106631	3300025944	Corn Rhizosphere	AIELPGGVNDSSCHEKVHYSCFGALCSGDGVGFLRERFRC
Ga0207679_112085021	3300025945	Corn Rhizosphere	MVAGFYGSRRSAIELPGDVNDSSCHEKVDYSCFSALCSRDGAGFL
Ga0207641_104453542	3300026088	Switchgrass Rhizosphere	AGFYGSRRSAIELPGEVNDSSCHEKVDYSCFSALWSGDGAGFLRERFRR
Ga0209377_10419895	3300026334	Soil	MCAHFTHQKMVAGFYGSRRSAIELPGGVNDTSRHEKVHYSCFSALC
Ga0170834_1051680712	3300031057	Forest Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFGALCSGDGAGFLREQFRR
Ga0170824_1219689991	3300031231	Forest Soil	VHFTHQKMVAGFYGSPRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFRR
Ga0170819_135501682	3300031469	Forest Soil	AGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREPFRR
Ga0170819_176551071	3300031469	Forest Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGA
Ga0170818_1029035681	3300031474	Forest Soil	GILCAHFTHQKMVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREPFRR
Ga0307469_104071613	3300031720	Hardwood Forest Soil	VVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLRERFRR
Ga0307469_112382441	3300031720	Hardwood Forest Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFL
Ga0307468_1006451472	3300031740	Hardwood Forest Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREPFRR
Ga0307468_1011271072	3300031740	Hardwood Forest Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYPCFSALCSGDGAGFVRERFRR
Ga0310904_104845301	3300031854	Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALRSGDGAGFLREQFLRGS
Ga0306925_121105201	3300031890	Soil	MVVGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLRE
Ga0310910_109145501	3300031946	Soil	SAIELPDGVNDSSCHEKVDYSCFSALCSGDGAGFLRERFQR
Ga0318533_105563402	3300032059	Soil	FTHQKMVVGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQLRRSFPS
Ga0307470_105981771	3300032174	Hardwood Forest Soil	EGILCAHFTHQKMVTGFYGSRRSVIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLREQFLRRPSSSSH
Ga0307471_1015801591	3300032180	Hardwood Forest Soil	MVAGFYGSRRSAIEFPGGVNDSSCHEKVDYPCFSALCSGDGAGFVRERFRR
Ga0307472_1005913532	3300032205	Hardwood Forest Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLRERFRR
Ga0306920_1004298353	3300032261	Soil	AHFTHQKMVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSADGAGFLREQLRRSFPS
Ga0310812_103107231	3300032421	Soil	ALGGVFISHIVFYGILCAHFTHQKMVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSALCSGDGAGFLRERFRR
Ga0326726_102301661	3300033433	Peat Soil	MVAGFYGSRRSAIELPGGVNDSSCHEKVDYSCFSV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F058344

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences