Metagenome / Metatranscriptome Family F058349

Basic Information
Family ID	F058349
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	76 residues
Representative Sequence	VSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFGMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLQ
Number of Associated Samples	112
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	37.04 %
% of genes near scaffold ends (potentially truncated)	42.96 %
% of genes from short scaffolds (< 2000 bps)	95.56 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Unclassified (68.889 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.593 % of family members)
Environment Ontology (ENVO)	Unclassified (42.963 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (66.667 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 7.59% β-sheet: 18.99% Coil/Unstructured: 73.42%
Feature Viewer

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Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF13563	2_5_RNA_ligase2	6.67
PF13565	HTH_32	2.22
PF00091	Tubulin	1.48
PF07729	FCD	0.74
PF00582	Usp	0.74
PF13561	adh_short_C2	0.74
PF12680	SnoaL_2	0.74
PF07228	SpoIIE	0.74
PF13556	HTH_30	0.74
PF04024	PspC	0.74
PF11175	DUF2961	0.74
PF03729	DUF308	0.74
PF00128	Alpha-amylase	0.74
PF01590	GAF	0.74
PF13683	rve_3	0.74
PF07883	Cupin_2	0.74
PF01548	DEDD_Tnp_IS110	0.74
PF00171	Aldedh	0.74
PF01068	DNA_ligase_A_M	0.74
PF12833	HTH_18	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.74
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	0.74
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	0.74
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.74
COG1423	ATP-dependent RNA circularization protein, DNA/RNA ligase (PAB1020) family	Replication, recombination and repair [L]	0.74
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	0.74
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.74
COG1802	DNA-binding transcriptional regulator, GntR family	Transcription [K]	0.74
COG2186	DNA-binding transcriptional regulator, FadR family	Transcription [K]	0.74
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	0.74
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	0.74
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.74
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.74

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.89 %
All Organisms	root	All Organisms	31.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.89 %
cellular organisms	root	All Organisms → cellular organisms	31.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.89 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	31.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.89 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	26.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.89 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	25.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.89 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	24.44 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.89 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	8.15 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	5.93 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.89 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	5.93 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	3.70 %
Propionibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae	2.96 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.89 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	4.44 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	3.70 %
Microlunatus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus	2.96 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.89 %
Nocardioides flavescens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides flavescens	3.70 %
Microlunatus phosphovorus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus	2.96 %
Pseudonocardia thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	1.48 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.74 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	68.89 %
Nocardioides flavescens	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides flavescens	3.70 %
Microlunatus phosphovorus NM-1	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus → Microlunatus phosphovorus NM-1	2.96 %
Pseudonocardia thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	1.48 %
Pseudonocardia sp. 73-21	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. 73-21	0.74 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_100664971	Not Available	956	Open in IMG/M
3300004463\|Ga0063356_105036176	Not Available	568	Open in IMG/M
3300005332\|Ga0066388_103619953	Not Available	789	Open in IMG/M
3300005335\|Ga0070666_11327894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus → Microlunatus phosphovorus NM-1	537	Open in IMG/M
3300005337\|Ga0070682_100083848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2069	Open in IMG/M
3300005338\|Ga0068868_100034606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3901	Open in IMG/M
3300005340\|Ga0070689_100831740	Not Available	813	Open in IMG/M
3300005347\|Ga0070668_100053380	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	3117	Open in IMG/M
3300005365\|Ga0070688_100979752	Not Available	671	Open in IMG/M
3300005435\|Ga0070714_100717455	Not Available	965	Open in IMG/M
3300005436\|Ga0070713_100385608	Not Available	1306	Open in IMG/M
3300005439\|Ga0070711_102013108	Not Available	508	Open in IMG/M
3300005441\|Ga0070700_100470096	Not Available	961	Open in IMG/M
3300005441\|Ga0070700_100610428	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300005441\|Ga0070700_101081965	Not Available	664	Open in IMG/M
3300005547\|Ga0070693_101319059	Not Available	558	Open in IMG/M
3300005548\|Ga0070665_100052202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4102	Open in IMG/M
3300005548\|Ga0070665_101520382	Not Available	678	Open in IMG/M
3300005548\|Ga0070665_101824277	Not Available	614	Open in IMG/M
3300005564\|Ga0070664_101146898	Not Available	733	Open in IMG/M
3300005564\|Ga0070664_101484443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	641	Open in IMG/M
3300005614\|Ga0068856_101337582	Not Available	731	Open in IMG/M
3300005618\|Ga0068864_100263685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	1603	Open in IMG/M
3300005719\|Ga0068861_101375735	All Organisms → cellular organisms → Bacteria	689	Open in IMG/M
3300005764\|Ga0066903_108054104	Not Available	540	Open in IMG/M
3300005841\|Ga0068863_101252064	Not Available	748	Open in IMG/M
3300005842\|Ga0068858_100495035	Not Available	1181	Open in IMG/M
3300005842\|Ga0068858_101910297	Not Available	587	Open in IMG/M
3300005843\|Ga0068860_102139772	Not Available	581	Open in IMG/M
3300006175\|Ga0070712_100254174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1406	Open in IMG/M
3300006175\|Ga0070712_100740611	Not Available	840	Open in IMG/M
3300006755\|Ga0079222_10068545	Not Available	1734	Open in IMG/M
3300006755\|Ga0079222_11666748	Not Available	609	Open in IMG/M
3300006804\|Ga0079221_11454229	Not Available	548	Open in IMG/M
3300006854\|Ga0075425_102715102	Not Available	546	Open in IMG/M
3300006881\|Ga0068865_101548258	Not Available	595	Open in IMG/M
3300006954\|Ga0079219_11872341	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565	Open in IMG/M
3300009094\|Ga0111539_10369194	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1670	Open in IMG/M
3300009098\|Ga0105245_10252593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1713	Open in IMG/M
3300009100\|Ga0075418_11872067	Not Available	653	Open in IMG/M
3300009101\|Ga0105247_10195628	Not Available	1356	Open in IMG/M
3300009101\|Ga0105247_10304629	Not Available	1106	Open in IMG/M
3300009156\|Ga0111538_12362568	Not Available	667	Open in IMG/M
3300009174\|Ga0105241_10859595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	839	Open in IMG/M
3300009177\|Ga0105248_13394404	Not Available	506	Open in IMG/M
3300009553\|Ga0105249_10351231	All Organisms → cellular organisms → Bacteria	1494	Open in IMG/M
3300009553\|Ga0105249_10483866	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300009789\|Ga0126307_10402876	Not Available	1103	Open in IMG/M
3300010045\|Ga0126311_10239415	Not Available	1342	Open in IMG/M
3300010154\|Ga0127503_10075342	Not Available	562	Open in IMG/M
3300010166\|Ga0126306_10396750	Not Available	1078	Open in IMG/M
3300010373\|Ga0134128_12696528	Not Available	548	Open in IMG/M
3300010396\|Ga0134126_11207458	Not Available	840	Open in IMG/M
3300010399\|Ga0134127_10630241	Not Available	1104	Open in IMG/M
3300010399\|Ga0134127_13260968	Not Available	530	Open in IMG/M
3300010401\|Ga0134121_12919786	Not Available	525	Open in IMG/M
3300010403\|Ga0134123_11244716	Not Available	777	Open in IMG/M
3300011119\|Ga0105246_10648148	Not Available	919	Open in IMG/M
3300012212\|Ga0150985_111420128	Not Available	673	Open in IMG/M
3300012494\|Ga0157341_1044052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus → Microlunatus phosphovorus NM-1	526	Open in IMG/M
3300012899\|Ga0157299_10056386	Not Available	898	Open in IMG/M
3300012914\|Ga0157297_10299348	Not Available	605	Open in IMG/M
3300012951\|Ga0164300_10890985	Not Available	561	Open in IMG/M
3300012955\|Ga0164298_10331014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus → Microlunatus phosphovorus NM-1	956	Open in IMG/M
3300012961\|Ga0164302_10041987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides flavescens	2202	Open in IMG/M
3300012984\|Ga0164309_10255237	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1239	Open in IMG/M
3300012985\|Ga0164308_11462085	Not Available	626	Open in IMG/M
3300012986\|Ga0164304_10695201	Not Available	772	Open in IMG/M
3300012987\|Ga0164307_10157299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides flavescens	1503	Open in IMG/M
3300012989\|Ga0164305_10130505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1672	Open in IMG/M
3300014325\|Ga0163163_10532316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides flavescens	1237	Open in IMG/M
3300014745\|Ga0157377_11054472	Not Available	619	Open in IMG/M
3300014968\|Ga0157379_10529954	Not Available	1094	Open in IMG/M
3300015371\|Ga0132258_12083923	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1426	Open in IMG/M
3300015371\|Ga0132258_12745469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides flavescens	1228	Open in IMG/M
3300015374\|Ga0132255_105233375	Not Available	549	Open in IMG/M
3300017965\|Ga0190266_10292754	Not Available	844	Open in IMG/M
3300017965\|Ga0190266_10453615	Not Available	731	Open in IMG/M
3300017965\|Ga0190266_11311350	Not Available	509	Open in IMG/M
3300018469\|Ga0190270_13227151	Not Available	517	Open in IMG/M
3300018476\|Ga0190274_11124534	Not Available	866	Open in IMG/M
3300020082\|Ga0206353_11043129	Not Available	628	Open in IMG/M
3300021081\|Ga0210379_10425397	Not Available	588	Open in IMG/M
3300021384\|Ga0213876_10020691	All Organisms → cellular organisms → Bacteria	3479	Open in IMG/M
3300025321\|Ga0207656_10423048	Not Available	671	Open in IMG/M
3300025898\|Ga0207692_10920984	Not Available	575	Open in IMG/M
3300025899\|Ga0207642_10299451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	932	Open in IMG/M
3300025900\|Ga0207710_10253772	Not Available	880	Open in IMG/M
3300025901\|Ga0207688_10173203	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1284	Open in IMG/M
3300025903\|Ga0207680_11074407	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	576	Open in IMG/M
3300025915\|Ga0207693_10317434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1220	Open in IMG/M
3300025915\|Ga0207693_10596985	Not Available	860	Open in IMG/M
3300025921\|Ga0207652_11669073	Not Available	542	Open in IMG/M
3300025926\|Ga0207659_11287234	Not Available	628	Open in IMG/M
3300025927\|Ga0207687_10253851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1399	Open in IMG/M
3300025928\|Ga0207700_10531372	Not Available	1043	Open in IMG/M
3300025928\|Ga0207700_11723298	Not Available	552	Open in IMG/M
3300025932\|Ga0207690_11038463	Not Available	682	Open in IMG/M
3300025935\|Ga0207709_11764650	Not Available	515	Open in IMG/M
3300025938\|Ga0207704_11534356	Not Available	572	Open in IMG/M
3300025940\|Ga0207691_11087907	Not Available	665	Open in IMG/M
3300025941\|Ga0207711_10565408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → Nocardioides flavescens	1061	Open in IMG/M
3300025944\|Ga0207661_11648631	Not Available	586	Open in IMG/M
3300025945\|Ga0207679_10379841	Not Available	1238	Open in IMG/M
3300025945\|Ga0207679_11505851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	617	Open in IMG/M
3300025961\|Ga0207712_10189787	All Organisms → cellular organisms → Bacteria	1621	Open in IMG/M
3300025986\|Ga0207658_11151719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Propionibacteriaceae → Microlunatus → Microlunatus phosphovorus → Microlunatus phosphovorus NM-1	709	Open in IMG/M
3300026023\|Ga0207677_10758074	Not Available	866	Open in IMG/M
3300026035\|Ga0207703_10606880	Not Available	1035	Open in IMG/M
3300026035\|Ga0207703_10833899	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	881	Open in IMG/M
3300026041\|Ga0207639_11097168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	746	Open in IMG/M
3300026067\|Ga0207678_10984047	Not Available	746	Open in IMG/M
3300026078\|Ga0207702_11275310	Not Available	729	Open in IMG/M
3300026078\|Ga0207702_11702940	Not Available	623	Open in IMG/M
3300027775\|Ga0209177_10111637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	882	Open in IMG/M
3300027787\|Ga0209074_10085898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1038	Open in IMG/M
3300027907\|Ga0207428_10823025	Not Available	659	Open in IMG/M
3300028379\|Ga0268266_10491405	Not Available	1171	Open in IMG/M
3300028379\|Ga0268266_11185286	Not Available	739	Open in IMG/M
3300028380\|Ga0268265_11151294	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	772	Open in IMG/M
3300028381\|Ga0268264_10903054	Not Available	887	Open in IMG/M
3300028596\|Ga0247821_10425920	Not Available	833	Open in IMG/M
3300028596\|Ga0247821_10432784	Not Available	826	Open in IMG/M
3300028597\|Ga0247820_10277232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. 73-21	1091	Open in IMG/M
3300028597\|Ga0247820_11114229	Not Available	567	Open in IMG/M
3300028708\|Ga0307295_10214521	Not Available	548	Open in IMG/M
3300028810\|Ga0307294_10063688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	1099	Open in IMG/M
3300031740\|Ga0307468_100324502	Not Available	1133	Open in IMG/M
3300031740\|Ga0307468_102330371	Not Available	521	Open in IMG/M
3300031824\|Ga0307413_10258961	Not Available	1296	Open in IMG/M
3300031852\|Ga0307410_12072494	Not Available	508	Open in IMG/M
3300031938\|Ga0308175_101657041	Not Available	716	Open in IMG/M
3300032075\|Ga0310890_11171553	Not Available	625	Open in IMG/M
3300033550\|Ga0247829_11301374	Not Available	601	Open in IMG/M
3300033551\|Ga0247830_10891231	Not Available	709	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	50.37%
Environmental	Environmental	49.63%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	50.37%
Terrestrial	Environmental → Terrestrial	48.15%
Aquatic	Environmental → Aquatic	1.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.15%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.89%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.00%
Freshwater	Environmental → Aquatic → Freshwater	1.48%
Roots	Host-Associated → Plants → Roots	1.48%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.59%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	17.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.30%
Loam	Environmental → Terrestrial → Soil → Loam	15.56%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.59%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.96%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.74%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.74%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.74%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	17.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.30%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.07%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.59%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.93%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.44%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.96%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.48%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.74%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.74%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.74%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.74%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.59%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.63%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.41%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.67%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.93%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	5.93%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.44%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.44%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.70%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.22%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.22%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.22%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.96%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.48%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.48%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.48%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.74%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.74%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.74%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.74%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.74%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.74%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.74%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.74%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012494	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.yng.030610	Host-Associated	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020082	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028597	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day14	Environmental	Open in IMG/M
3300028708	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_152	Environmental	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1006649711	3300000364	Soil	MPAATPAETTGEIVLSWAPDGPVVTAPDRAVVPAVELFGMRRVPGDPRAVELPGGIRYRIGAAH
Ga0063356_1050361761	3300004463	Arabidopsis Thaliana Rhizosphere	MPAATPAEMTGEIVLSWAPDGPVVTAPDRAAVPAVELFGMRRVPGDPRAVELPGGIRYRIGAAHQRWRGAVYLHRLP
Ga0066388_1036199531	3300005332	Tropical Forest Soil	MPPVAPAETTGEIVLSWGPEGPTVTAPDRAVVPAMELFGMRRVPGDPRAVELPGGVRYLIGAAHRRWRGAVYLHRMPQ*
Ga0070666_113278942	3300005335	Switchgrass Rhizosphere	GRTRPVSTIPATPAETTGEILLTWGPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLQ*
Ga0070682_1000838481	3300005337	Corn Rhizosphere	MTPATPVETTGEIVLNWGPGEPVVTAPERAAIPAVELFGMRRVPGQPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ*
Ga0068868_10003460610	3300005338	Miscanthus Rhizosphere	VSTIPATPAETTGEILLTWGPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLQ*
Ga0070689_1008317402	3300005340	Switchgrass Rhizosphere	TTGEILLTWGPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLQ*
Ga0070668_1000533804	3300005347	Switchgrass Rhizosphere	MTPATPVETTGEIVLNWGPGGPVVTAPERAAIPAVELFGMRRVPGQPRAVELPGGVRYRIGAAHRRWPGAV*
Ga0070688_1009797521	3300005365	Switchgrass Rhizosphere	MTPATPVETTGEIVVNWGPGGPVVTAPERAAIPAVELFGMRRVPGQPRAVELPGGVRYRIGAAHRRWPGA
Ga0070714_1007174551	3300005435	Agricultural Soil	MPPVAPAETTGEIVLTWGPDGPTVTAPDRAAVPALELFGMRRVPGDPRAVELPGGIRYLIGAAHRGWRGAVYLHRLPQ*
Ga0070713_1003856083	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFGMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLQ*
Ga0070711_1020131081	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTPATPAETTGEIILTWGTDGPVVTAPDRAAAPALELFGMRRVPGDPRAVEFPGGIRYLIGTAHRRWRGAVYLHRMPQ*
Ga0070700_1004700961	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	VSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLR*
Ga0070700_1006104281	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MTPATPVETTGEIVLNWGPGEPVVTAPERAAIPAVELFGMRRVPGQPRAVELPGGVRYRIGAAHRRWPGAV*
Ga0070700_1010819652	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	RPTGRTRPVSTIPATPAETTGEILLTWGPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLQ*
Ga0070693_1013190591	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	APDLAAVPASELFGMRRVPGVPRAVELPGGIRYRIGSAHRRWRGAVYLHRLPH*
Ga0070665_1000522027	3300005548	Switchgrass Rhizosphere	DRPTSATVSMTPATPVETTGEIVRNWGPGGPVVTAPERAAIPAVELFGMRRVPGKPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ*
Ga0070665_1015203822	3300005548	Switchgrass Rhizosphere	RPTGRTRPVSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFAMRRAPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLR*
Ga0070665_1018242771	3300005548	Switchgrass Rhizosphere	MTPATPVETTGEIVLNWGPGGPVVTAPERAAIPAVELFGMRRVPGQPRAVELPGGVRYRIGAAHR
Ga0070664_1011468981	3300005564	Corn Rhizosphere	VSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLQ*
Ga0070664_1014844431	3300005564	Corn Rhizosphere	RGPHGPAVTAPDHASIPALELFAMRRAPGDPRAVDLPGEVRYRICSAHRRWPGAMSLHRLR*
Ga0068856_1013375821	3300005614	Corn Rhizosphere	VSATPLTPMETTGEIVLAWGHDGPVVTAPDLAAVPASELFGMRRVPGVPRAVELPGGIRYRIGSAHRRWRGAVYLHRLPH*
Ga0068864_1002636851	3300005618	Switchgrass Rhizosphere	EVPRPTGRTRPVSTIPATPAETTGEILLTWGPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLQ*
Ga0068861_1013757351	3300005719	Switchgrass Rhizosphere	MTPATPVETTGEIVLNWGPGGPVVTAPERAAIPAVELFGMRRVPGKPRAVELPGGVRYRIGAAHRRWPGAV*
Ga0066903_1080541041	3300005764	Tropical Forest Soil	QGRTPVVSMTPSNPVETTGEIVLTFGPDGPVVTAPERAAVPAMDLFDMHRVPGDPRAVELPGGVRYLIGAAHRRLRGAVYLHRLRH*
Ga0068863_1012520641	3300005841	Switchgrass Rhizosphere	MTPATPVETTGEIVLNWGPGGPVVTAPERAAIPAVELFGMRRVPGQPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ*
Ga0068858_1004950352	3300005842	Switchgrass Rhizosphere	MTPATPVETTGEIVLNWGPGGPVVTAPERAAIPAVELFGMRRVPGKPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ*
Ga0068858_1019102972	3300005842	Switchgrass Rhizosphere	VSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFAMRRAPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLR*
Ga0068860_1021397722	3300005843	Switchgrass Rhizosphere	MTPATPVETTGEIVLNWGPGEPVVTAPERAAIPAVELFGMRRVPGKPRAVELPGGVRYRIGAAHRRWPGAVY
Ga0070712_1002541744	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AETTGEIVLSWAPDGPVVTAPDRAAVPAVELFGMRRVPGDPRAVEFPGGIRYLIGAAHRRWRGAVYLHRLPQ*
Ga0070712_1007406111	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MPAATPAETTGEIVLSWAPDGPVVTAPDRAAVPAVELFGLRRVPGDPRAVELPGGIRYRIGAAHQRWRGAVYLHRLPQ*
Ga0079222_100685454	3300006755	Agricultural Soil	VSMTPATPAETTGEIILTWGPDGPMVTAPDRAAVPALELFGMRRVPGVSRAVEFPGGIRYMIGTAHRRWPGAVYLHRMPQ*
Ga0079222_116667481	3300006755	Agricultural Soil	MTGEIVLTFGPDGPVVTAPERAAIPAMDLFDMDRVAGDPRAVELPGGVRYPIGAAHRRLRGAVYLHRLRHD*
Ga0079221_114542292	3300006804	Agricultural Soil	ATPVETTGEIVLNWGPGGPVVTAPERAAIPAVELFGMRRVPGQPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ*
Ga0075425_1027151021	3300006854	Populus Rhizosphere	LHTMTSYSFDAQRPTGRTRAVSTIPATPAETTGEILLTWGPDGPAVTAPDQAAIPALELFGMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLQ*
Ga0068865_1015482581	3300006881	Miscanthus Rhizosphere	QRPTGRTRPVSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLR*
Ga0079219_118723411	3300006954	Agricultural Soil	VETTGEIVLNWGPGGPVVTAPERAAIPAVELFGMRRVPGQPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ*
Ga0111539_103691942	3300009094	Populus Rhizosphere	MTWGPDGPRVTAPDRAAVPALELFGMRRVPGDPRAVELPGGIRYLIGAAHRRWRGAVYLHRMPQ*
Ga0105245_102525931	3300009098	Miscanthus Rhizosphere	LESWGPVVTAPERAAIPAVEFFGMRRVPGQPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ*
Ga0075418_118720671	3300009100	Populus Rhizosphere	IVMTWGPDGPRVTAPDRAAVPALELFGMRRVPGDPRAVELPGGIRYLIGAAHRRWRGAVYLHRMPQ*
Ga0105247_101956281	3300009101	Switchgrass Rhizosphere	VSTIPATPAETTGEILLTWGPEGLAVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLR*
Ga0105247_103046292	3300009101	Switchgrass Rhizosphere	MTPATPVETTGEIVLNWGPGGPVVTAPERAAIPAVDLFGMRRVPGKPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ*
Ga0111538_123625681	3300009156	Populus Rhizosphere	MTSYSFDAQRPTGRTRAVSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFGMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLQ*
Ga0105241_108595953	3300009174	Corn Rhizosphere	IPAETTGESLLTRGPHGPAVTAPDHASIPALELFAMRRAPGDPRAVDLPGEVRYRICSAHRRWPGAMSLHRLR*
Ga0105248_133944041	3300009177	Switchgrass Rhizosphere	METTGEIVFSRSALGLVVMAPDRAAAPVSELFGLRRVPGQPRVVEFPGGIRYRIGAAHRRWRDAVYLHRLPS*
Ga0105249_103512311	3300009553	Switchgrass Rhizosphere	TGPPEVSATPLTSMETTGEIVLACGRFGPVITEPDLAAVPASELFGMRRVPGVPRAVELPGGIRYRIGSAHRRWRGAVYLHRLPH*
Ga0105249_104838661	3300009553	Switchgrass Rhizosphere	TGEILLTWGPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLQ*
Ga0126307_104028763	3300009789	Serpentine Soil	LTWGPDGPAVTAPDRAAVPVWELFGMRRVPGDPRAVELPGGVRYLIGAAHRRWRGAVYLHRMPQ*
Ga0126311_102394151	3300010045	Serpentine Soil	VTAPDRAAVPVWELFGMRRVPGDPRAVELPGGVRYLIGAAHRRWRGAVYLHRMPQ*
Ga0127503_100753421	3300010154	Soil	MPAATPAETTGEIVLSWAPDGPVVTAPDRAAVPAVELFGMRRVPGDPRAVELPGGIRYRIGAAHQRWRGAVYLHRLPQ*
Ga0126306_103967501	3300010166	Serpentine Soil	LTWGPDGPVVTAPDRAAVPVWELFGMRRVPGDPRAVELPGGVRYLIGAAHRRWRGAVYLHRMPQ*
Ga0134128_126965281	3300010373	Terrestrial Soil	TSATVSMTPATPVETTGEIVLNWGPGGPVVTAPERAAIPAVELFGMRRVPGQPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ*
Ga0134126_112074582	3300010396	Terrestrial Soil	VSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGAAHRQWPGAVYLHRLQ*
Ga0134127_106302412	3300010399	Terrestrial Soil	MTPATPVETTGEIVLNWGPGEPVVTAPERAAIPAVELFGMRRVPGKPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ*
Ga0134127_132609681	3300010399	Terrestrial Soil	METTGEIVLAWGHDGPVVTAPDLAAVPASELFGMRRVPGVPRAVELPGGIRYRIGSAHRRWRGAVYLHRLPH*
Ga0134121_129197861	3300010401	Terrestrial Soil	VSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLQ*
Ga0134123_112447161	3300010403	Terrestrial Soil	VSTIPAIPAETTGEILLTWSPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELTGEVRYRIGAAHRRWPGAVYLHRLQ*
Ga0105246_106481481	3300011119	Miscanthus Rhizosphere	MADRTMVSMTPATPAETTGLTWGTDGPVVTAPNRAAAPALELFGMRRVPGVPRAVEFPGGIRYLIGTAHQRWPGAVYLHRMPQ*
Ga0150985_1114201281	3300012212	Avena Fatua Rhizosphere	VSTIPATPAETTGEILLTWGPEGPVVTAPDQAAIPALELFGMRRVPGDPRVVELPGEVRYRIGSAHRRWPGAVYLHRLQ*
Ga0157341_10440522	3300012494	Arabidopsis Rhizosphere	VTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLR*
Ga0157299_100563861	3300012899	Soil	MTSVSPPIHDDRQDAHDMSMPAATPAETTGEIVLSWAPDGPVVTAPDRAAVPAVELFGMRRVPGDPRAVELPGGIRYRIGAAHQRWRGAVYLHRLPQ*
Ga0157297_102993481	3300012914	Soil	MPAATPAETTGEIVLSWAPDGPVVTAPDRAVVPAVELFGMRRVPGDPRAVELPGGIRYLIGAAHRRWRGAVYLHRM
Ga0164300_108909851	3300012951	Soil	MTPATPAETTGEIVLTWGPDGPAVTAPDRAAVPALEPFGMPRVPGDPRAVELPGGIRYLIGATHRRWRGAVYLHRMPQ*
Ga0164298_103310141	3300012955	Soil	VKTIPATPAETTGEILLTWGPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLQ*
Ga0164302_100419874	3300012961	Soil	VSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFGMRRVPGDPRAVELPGEIRYRIGSAHRRWPGAVYLHRLQ*
Ga0164309_102552371	3300012984	Soil	MTPATPAETTGEIVLTWGPDGPAVTAPDRAAVPALELFGMHRVPGDPRAVELPGGIRYLIGATHRRWRGAVYLHRMPP*
Ga0164308_114620851	3300012985	Soil	MTPATPAETTGEIVLTWGPDGPAVTAPDRAAVPALELFGMHRVPGDPRAVELPGGIRYLIGATHRRWRGAVYLHRMPQ*
Ga0164304_106952011	3300012986	Soil	MPPVAPAETTGEIVLTWGPDGPTVTAPDRAAVPALELFGMRRVPGDPRAVELPGGIRCLIGAVHRGWRGAVYLHRLPQ*
Ga0164307_101572993	3300012987	Soil	STIPATPAETTGEILLTWGPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLQ*
Ga0164305_101305054	3300012989	Soil	MTPATPAETTGEIVLTWGPDGPAVTAPDRAAVPALELFGMHRVPGDPRAVELPGGIRYLIGATHRRWR
Ga0163163_105323162	3300014325	Switchgrass Rhizosphere	VSTIPAIPAETTGEILLTWSPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLQ*
Ga0157377_110544721	3300014745	Miscanthus Rhizosphere	VSTIPATPAETTGEILLTWGPEGPAVTDPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGAAH
Ga0157379_105299541	3300014968	Switchgrass Rhizosphere	VSTIPATPAETTGQILLTWGPEGPAVTAPDQAAIPALELFGMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLR*
Ga0132258_120839231	3300015371	Arabidopsis Rhizosphere	TTAEIVLNWGPGGPVVTAPERAAIPAVELFGMRRVPGQPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ*
Ga0132258_127454691	3300015371	Arabidopsis Rhizosphere	VSTIPATPAETTGEILLTWGPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLR*
Ga0132255_1052333752	3300015374	Arabidopsis Rhizosphere	VETTGEIVFSRSALGLVVMAPDRAAAPVSELFGLRRVPDQPRVVEFPGGIRYRIGAVHRRWRDAVYLHRLPS*
Ga0190266_102927541	3300017965	Soil	PTGRTRPVNTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFGMRRVPGDPRAVEFPGEVRYRIGCAHRRWPGAVYLHRLP
Ga0190266_104536151	3300017965	Soil	MTPAAPVETTGEIVLTWGPDGPAVTAPDRAVVPAMELFGMRRVTGDPRAVELPGGIRYLIGAAHRRWRGAVYLHRLPQ
Ga0190266_113113501	3300017965	Soil	VSTIPATPAETTGEILLTWGPDGPAVTAPDQAAIPALELFGMRRVPGDPRVVELPGEVRYRIGCAHRRWP
Ga0190270_132271511	3300018469	Soil	LHTMTSYSFDAQRPTGRTRAVSTIPATPAETTGEILLTWGTEGPAVTAPDRAVVPALELFGMRRVPGDPRAVELPGGIRYLIGAAHRRWRGAVYLHRMPH
Ga0190274_111245341	3300018476	Soil	MTPVSMTPVSMTPATPAETTGEIVLTWGPDGPAVTAPDRAAVPALELFGMHRVPGDPRAVELPGGVRYLIGATHRRWRGAVYLHRMPQ
Ga0206353_110431291	3300020082	Corn, Switchgrass And Miscanthus Rhizosphere	VSATPLTPMETTGEIVLAWGHDGPVVTAPDLAAVPASELFGMRRVPGVPRAVELPGGIRYRIGSAHRRWRGAVYLHRLPH
Ga0210379_104253971	3300021081	Groundwater Sediment	MTSVSPPIHDDRQDAHDMSMPAATPAETTGEIVLSWAPDGPVVTAPDRAAVPAVELFGMRRVPGDPRAVELPGGIRYRIGAAHQRWRGAVYLHRLPQ
Ga0213876_100206913	3300021384	Plant Roots	VNATPLTPVETTGEIVLAWCDDGPVVTAPDLAAIPASELFGMRRVPGVPRAVELPGGIRYRIGSAHRRWRGAVYLHRLPN
Ga0207656_104230481	3300025321	Corn Rhizosphere	MTPATPVETTGEIVLNWGPGGPVVTAPERAAIPAVELFGMRRVPGQPRAVELPGGVRYRIGAAHRRWPGAVYLHR
Ga0207692_109209841	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTPATPVKTTGEIVLNWGPGGPVVTAPERAAIPAVELFGMRRVPGKPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ
Ga0207642_102994511	3300025899	Miscanthus Rhizosphere	VSTIPATPAETTGEILLTWGPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWP
Ga0207710_102537721	3300025900	Switchgrass Rhizosphere	RRQPAGHDDRPTSATVSMTPATPVETTGEIVLNWGPGEPVVTAPERAAIPAVELFGMRRVPGQPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ
Ga0207688_101732033	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MTPATPVETTGEIVLNWGPGEPVVTAPERAAIPAVELFGMRRVPGKPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ
Ga0207680_110744071	3300025903	Switchgrass Rhizosphere	MPTSTIPATPAETTGEILLTWGPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLQ
Ga0207693_103174342	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MPAATPAETTGEIVLSWAPDGPVVTAPDRAAVPAVELFGLRRVPGDPRAVELPGGIRYRIGAAHQRWRGAVYLHRLPQ
Ga0207693_105969851	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFGMRRVPGDPRAVELPGEIRYRIGSAHRRWPGAVYLHRLQ
Ga0207652_116690732	3300025921	Corn Rhizosphere	MTPATPVETTGEIVLNWGPGGPVVTAPERAAIPAVELFGMRRVPGQPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ
Ga0207659_112872342	3300025926	Miscanthus Rhizosphere	VSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLR
Ga0207687_102538512	3300025927	Miscanthus Rhizosphere	MTPATPVETTGEIVLNWGPGEPVVTAPERAAIPAVELFGMRRVPGQPRAVELPGGVRYRIGAAHRRWPGAV
Ga0207700_105313721	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFGMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLQ
Ga0207700_117232981	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	PVVTAPDLAAVPASELFGMRRVPGVPRAVELPGGIRYRIGSAHRRWRGAVYLHRLPH
Ga0207690_110384631	3300025932	Corn Rhizosphere	MTPATPVETTGEIVLNWGPGGPVVTAPERAAIPAVELFGMRRVPGKPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ
Ga0207709_117646501	3300025935	Miscanthus Rhizosphere	VSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYL
Ga0207704_115343561	3300025938	Miscanthus Rhizosphere	RPVSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLR
Ga0207691_110879071	3300025940	Miscanthus Rhizosphere	PVETTGEIVLNWGPGGPVVTAPERAAIPAVELFGMRRVPGKPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ
Ga0207711_105654082	3300025941	Switchgrass Rhizosphere	PVSTIPATPAETTGEILLTWGPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLQ
Ga0207661_116486311	3300025944	Corn Rhizosphere	DPATPVETTGEIVLNWGPGGPVVTAPERAAIPAVELFGMRRVPGQPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ
Ga0207679_103798412	3300025945	Corn Rhizosphere	VTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLQ
Ga0207679_115058511	3300025945	Corn Rhizosphere	TTGESLLTRGPHGPAVTAPDHASIPALELFAMRRAPGDPRAVDLPGEVRYRICSAHRRWPGAMSLHRLR
Ga0207712_101897871	3300025961	Switchgrass Rhizosphere	GHDGPVVTAPDLAAVPASELFGMRRVPGVPRAVELPGGIRYRIGSAHRRWRGAVYLHRLP
Ga0207658_111517192	3300025986	Switchgrass Rhizosphere	VSTIPAIPAETTGEILLTWGPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLQ
Ga0207677_107580743	3300026023	Miscanthus Rhizosphere	VSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFAMRRAPGDPRAVELPGEVRYRIGAA
Ga0207703_106068801	3300026035	Switchgrass Rhizosphere	WGPGGPVVTAPERAAIPAVELFGMRRVPGKPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ
Ga0207703_108338991	3300026035	Switchgrass Rhizosphere	MTPATPVETTGEIVLNWGPGGPVVTAPERAAIPAVELFGMRRVPGQPRAVELPGGVRYRIGAAHRRWPGAV
Ga0207639_110971681	3300026041	Corn Rhizosphere	RPVSTIPATPAETTGEILLTWGPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLQ
Ga0207678_109840472	3300026067	Corn Rhizosphere	VSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLQ
Ga0207702_112753101	3300026078	Corn Rhizosphere	VSATPLTPMETTGEIVLAWGHDGPVVTAPDLAAVPASELFGMRRVPGVPRAVELPGGIRYRIGSAHRRWRGAVYLH
Ga0207702_117029401	3300026078	Corn Rhizosphere	VIVGAVLEIGIEPTSATVSMTPATPVETTGEIVLNWGPGGPVVTAPERAAIPAVELFGMRRVPGQPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ
Ga0209177_101116371	3300027775	Agricultural Soil	VSMTPATPAETTGEIILTWGPDGPMVTAPDRAAVPALELFGMRRVPGVSRAVEFPGGIRYMIGTAHRRWPGAVYLHRMPQ
Ga0209074_100858982	3300027787	Agricultural Soil	VSMTPATPAETTGEIILTWGPDGPMVTAPDRAAVPALELFGMRRVPGVSRAVEFPGGIRYIIGTAHRRWPGAVYLHRMPQ
Ga0207428_108230252	3300027907	Populus Rhizosphere	MTWGPDGPRVTAPDRAAVPALELFGMRRVPGDPRAVELPGGIRYLIGAAHRRWRGAVYLHRMPQ
Ga0268266_104914052	3300028379	Switchgrass Rhizosphere	MTPATPVETTGEIVRNWGPGGPVVTAPERAAIPAVELFGMRRVPGKPRAVELPGGVRYRIGAAHRRWPGAVYLHRLPQ
Ga0268266_111852862	3300028379	Switchgrass Rhizosphere	PTGRTRPVSTIPATPAETTGEILLTWGPEGPAVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLR
Ga0268265_111512941	3300028380	Switchgrass Rhizosphere	MSCSVSTIPATPAETTGEILLTWGPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLQ
Ga0268264_109030541	3300028381	Switchgrass Rhizosphere	VTTIPATPAETTGEILLTWGPEGPVVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLQ
Ga0247821_104259201	3300028596	Soil	MTAATPAETTGEIIFTWGTDGPVVTAPDRAAVRALELFGMRRVPGVPRAVEFPGGIRYLIGTAHQRWPGAVYLHRMPQ
Ga0247821_104327841	3300028596	Soil	GQILLTWGPEGPAVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLR
Ga0247820_102772321	3300028597	Soil	AETTGEILLTWGPEGPAVTAPDQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLR
Ga0247820_111142291	3300028597	Soil	MTPVSMTPVSMTPATPAETTGEIVLTWGPDGPAVTAPDRAAVPALELFGMHRVPGDPRAVELPGGVRYLIGATHRRWRGAVYLH
Ga0307295_102145211	3300028708	Soil	AVTAPEQAAIPTLELFGMRRVPGDPRAVELPGEVRYRIGRAHRGWPGVVYLHRLQ
Ga0307294_100636881	3300028810	Soil	GPAVTAPEQAAIPALELFGMRRVPGDPRVVELPGAVRYRIGRAHRGWPGVVYLHRLQ
Ga0307468_1003245022	3300031740	Hardwood Forest Soil	LTWGPDGPVVTAPDRVAVPVWELFGMRRVPGDPRAVELPGGIRYRIGAAHQRWRGAVYLHRLPH
Ga0307468_1023303711	3300031740	Hardwood Forest Soil	PTTDGTHTTVSTILATPAETTGEILLSWGPDGPAVTAPEQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLQ
Ga0307413_102589612	3300031824	Rhizosphere	VSTIPATPAETTGEIVLTWSPDGPVVTAPALVAVPVMELFEMRRVPGDPRAVELPGGIRYLIGAAHRRW
Ga0307410_120724941	3300031852	Rhizosphere	LTWGPDGPVVTAPDRAAVPVWELFGMRRVPGDPRAVELPGGVRYLIGAAHRRWRGAVYLHRMPQ
Ga0308175_1016570411	3300031938	Soil	VSTTPSNPVETTGEIVLTFGPDGPVVTAPERAAVPAMDLFDMRRVPGDPRSVELPGGVRYLIGAEHRRLRGAVYLHRLRH
Ga0310890_111715531	3300032075	Soil	PTGRTRPVSTIPATPAETTGEILLTWGPEGPVVTAPDQAAIPAMELFAMCRVPGDPRAVELPGEVRYRIGSAHRRWPGAVYLHRLQ
Ga0247829_113013742	3300033550	Soil	VSTIPATPAETTGEILLTWGPEGPAVTAPEQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLR
Ga0247830_108912311	3300033551	Soil	VCDAQRPTGRTRPVSTIPATPAETTGEILLTWGPEGPAVTAPEQAAIPALELFAMRRVPGDPRAVELPGEVRYRIGAAHRRWPGAVYLHRLR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058349

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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