Metagenome / Metatranscriptome Family F058547

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F058547
Family Type	Metagenome / Metatranscriptome
Number of Sequences	135
Average Sequence Length	64 residues
Representative Sequence	MLHRSLPQGERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARMLVGALAARRGGREVVLVYAP
Number of Associated Samples	107
Number of Associated Scaffolds	135

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	51.11 %
% of genes near scaffold ends (potentially truncated)	36.30 %
% of genes from short scaffolds (< 2000 bps)	83.70 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (67.407 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (36.296 % of family members)
Environment Ontology (ENVO)	Unclassified (27.407 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.333 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 38.71% β-sheet: 0.00% Coil/Unstructured: 61.29%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.39
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 135 Family Scaffolds
PF02673	BacA	20.00
PF01569	PAP2	9.63
PF04545	Sigma70_r4	1.48
PF00156	Pribosyltran	1.48
PF03534	SpvB	0.74
PF07934	OGG_N	0.74
PF00498	FHA	0.74
PF01255	Prenyltransf	0.74
PF03979	Sigma70_r1_1	0.74

COG ID	Name	Functional Category	% Frequency in 135 Family Scaffolds
COG1968	Undecaprenyl pyrophosphate phosphatase	Lipid transport and metabolism [I]	20.00
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	0.74
COG0122	3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase	Replication, recombination and repair [L]	0.74
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.74

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	67.41 %
Unclassified	root	N/A	32.59 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	67.41 %
Unclassified	root	N/A	32.59 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	67.41 %
Unclassified	root	N/A	32.59 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	65.19 %
Unclassified	root	N/A	32.59 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	65.19 %
Unclassified	root	N/A	32.59 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.59 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8.89 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	3.70 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2.22 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.59 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.89 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	3.70 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.74 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.89 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	3.70 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.74 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.89 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	3.70 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.74 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.74 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	32.59 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.89 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	3.70 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.74 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.74 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_108179184	Not Available	676	Open in IMG/M
3300001361\|A30PFW6_1266990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	900	Open in IMG/M
3300001536\|A1565W1_12314404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300001537\|A2065W1_10149204	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	853	Open in IMG/M
3300004156\|Ga0062589_101148547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	739	Open in IMG/M
3300004480\|Ga0062592_101467738	Not Available	653	Open in IMG/M
3300005172\|Ga0066683_10186659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1279	Open in IMG/M
3300005187\|Ga0066675_11447125	Not Available	502	Open in IMG/M
3300005329\|Ga0070683_100504917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1155	Open in IMG/M
3300005334\|Ga0068869_100501971	Not Available	1013	Open in IMG/M
3300005446\|Ga0066686_10450573	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300005467\|Ga0070706_100009295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	9160	Open in IMG/M
3300005468\|Ga0070707_100000908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	29349	Open in IMG/M
3300005518\|Ga0070699_100089724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2686	Open in IMG/M
3300005540\|Ga0066697_10140769	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1422	Open in IMG/M
3300005549\|Ga0070704_100360024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1230	Open in IMG/M
3300005558\|Ga0066698_10074543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2196	Open in IMG/M
3300005559\|Ga0066700_10203715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1367	Open in IMG/M
3300005618\|Ga0068864_100809704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	921	Open in IMG/M
3300006175\|Ga0070712_100572180	Not Available	954	Open in IMG/M
3300007258\|Ga0099793_10049974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1841	Open in IMG/M
3300009012\|Ga0066710_100805099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1440	Open in IMG/M
3300009012\|Ga0066710_101722077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	952	Open in IMG/M
3300009088\|Ga0099830_11698424	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	527	Open in IMG/M
3300009137\|Ga0066709_101096577	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1170	Open in IMG/M
3300009137\|Ga0066709_101449650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	994	Open in IMG/M
3300009176\|Ga0105242_10313711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1436	Open in IMG/M
3300009176\|Ga0105242_10433260	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1235	Open in IMG/M
3300010039\|Ga0126309_10138406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1296	Open in IMG/M
3300010128\|Ga0127486_1075810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	513	Open in IMG/M
3300010147\|Ga0126319_1357726	Not Available	635	Open in IMG/M
3300010336\|Ga0134071_10394986	Not Available	704	Open in IMG/M
3300011271\|Ga0137393_11076268	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	684	Open in IMG/M
3300011971\|Ga0120175_1034367	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300011991\|Ga0120153_1006066	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3719	Open in IMG/M
3300011992\|Ga0120146_1002486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5549	Open in IMG/M
3300012014\|Ga0120159_1020515	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2450	Open in IMG/M
3300012198\|Ga0137364_10062533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2521	Open in IMG/M
3300012201\|Ga0137365_10054046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3037	Open in IMG/M
3300012203\|Ga0137399_10052256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2976	Open in IMG/M
3300012204\|Ga0137374_10000878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	32758	Open in IMG/M
3300012207\|Ga0137381_10117499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2268	Open in IMG/M
3300012208\|Ga0137376_10719978	Not Available	860	Open in IMG/M
3300012349\|Ga0137387_10283164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1198	Open in IMG/M
3300012351\|Ga0137386_10362674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1043	Open in IMG/M
3300012360\|Ga0137375_10001586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	26508	Open in IMG/M
3300012532\|Ga0137373_10376148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1109	Open in IMG/M
3300012685\|Ga0137397_10097870	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	2148	Open in IMG/M
3300012905\|Ga0157296_10147928	Not Available	700	Open in IMG/M
3300012907\|Ga0157283_10004274	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2117	Open in IMG/M
3300012922\|Ga0137394_10245176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1531	Open in IMG/M
3300012929\|Ga0137404_11118242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	723	Open in IMG/M
3300012944\|Ga0137410_10801735	Not Available	791	Open in IMG/M
3300012951\|Ga0164300_11071909	Not Available	524	Open in IMG/M
3300012958\|Ga0164299_10175213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1213	Open in IMG/M
3300012958\|Ga0164299_10683614	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	715	Open in IMG/M
3300012960\|Ga0164301_10166525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1367	Open in IMG/M
3300012960\|Ga0164301_10482850	Not Available	889	Open in IMG/M
3300012961\|Ga0164302_10224851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1173	Open in IMG/M
3300012985\|Ga0164308_10139448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1774	Open in IMG/M
3300012986\|Ga0164304_10490940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	894	Open in IMG/M
3300012989\|Ga0164305_10358136	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1102	Open in IMG/M
3300012989\|Ga0164305_11240650	Not Available	648	Open in IMG/M
3300012989\|Ga0164305_11265668	Not Available	643	Open in IMG/M
3300013308\|Ga0157375_11739929	Not Available	738	Open in IMG/M
3300013501\|Ga0120154_1028771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1398	Open in IMG/M
3300013763\|Ga0120179_1011963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2226	Open in IMG/M
3300013768\|Ga0120155_1003476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6211	Open in IMG/M
3300013768\|Ga0120155_1141653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	655	Open in IMG/M
3300013772\|Ga0120158_10139735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1362	Open in IMG/M
3300015241\|Ga0137418_10168811	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1914	Open in IMG/M
3300017654\|Ga0134069_1367974	Not Available	518	Open in IMG/M
3300017654\|Ga0134069_1373142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
3300018000\|Ga0184604_10014782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1739	Open in IMG/M
3300018027\|Ga0184605_10012094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3325	Open in IMG/M
3300018027\|Ga0184605_10392412	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	621	Open in IMG/M
3300018028\|Ga0184608_10318113	Not Available	684	Open in IMG/M
3300018051\|Ga0184620_10207621	Not Available	653	Open in IMG/M
3300018054\|Ga0184621_10360061	Not Available	511	Open in IMG/M
3300018061\|Ga0184619_10051966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1784	Open in IMG/M
3300018061\|Ga0184619_10235755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	841	Open in IMG/M
3300018066\|Ga0184617_1039137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1163	Open in IMG/M
3300018071\|Ga0184618_10076984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1268	Open in IMG/M
3300018071\|Ga0184618_10119774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1050	Open in IMG/M
3300018071\|Ga0184618_10354658	Not Available	625	Open in IMG/M
3300018071\|Ga0184618_10509863	Not Available	504	Open in IMG/M
3300018431\|Ga0066655_10592189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	746	Open in IMG/M
3300019877\|Ga0193722_1036621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1264	Open in IMG/M
3300020002\|Ga0193730_1056422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1129	Open in IMG/M
3300020022\|Ga0193733_1140801	Not Available	658	Open in IMG/M
3300021080\|Ga0210382_10003326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5203	Open in IMG/M
3300021080\|Ga0210382_10040101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1803	Open in IMG/M
3300021080\|Ga0210382_10170439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	938	Open in IMG/M
3300021080\|Ga0210382_10562447	Not Available	505	Open in IMG/M
3300021344\|Ga0193719_10068589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1539	Open in IMG/M
3300021344\|Ga0193719_10098270	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1273	Open in IMG/M
3300022756\|Ga0222622_11277559	Not Available	540	Open in IMG/M
3300025942\|Ga0207689_10185688	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1715	Open in IMG/M
3300026095\|Ga0207676_10568530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1085	Open in IMG/M
3300027882\|Ga0209590_10017859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3516	Open in IMG/M
3300027882\|Ga0209590_10697571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	649	Open in IMG/M
3300028536\|Ga0137415_10017789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7049	Open in IMG/M
3300028711\|Ga0307293_10033529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1561	Open in IMG/M
3300028711\|Ga0307293_10170586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300028714\|Ga0307309_10146927	Not Available	594	Open in IMG/M
3300028719\|Ga0307301_10114167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	861	Open in IMG/M
3300028720\|Ga0307317_10348549	Not Available	500	Open in IMG/M
3300028721\|Ga0307315_10070568	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	998	Open in IMG/M
3300028722\|Ga0307319_10077683	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1054	Open in IMG/M
3300028722\|Ga0307319_10209835	Not Available	638	Open in IMG/M
3300028744\|Ga0307318_10220330	Not Available	658	Open in IMG/M
3300028768\|Ga0307280_10322843	Not Available	566	Open in IMG/M
3300028784\|Ga0307282_10528734	Not Available	572	Open in IMG/M
3300028784\|Ga0307282_10645658	Not Available	513	Open in IMG/M
3300028791\|Ga0307290_10326871	Not Available	561	Open in IMG/M
3300028807\|Ga0307305_10016688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3276	Open in IMG/M
3300028814\|Ga0307302_10398145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	681	Open in IMG/M
3300028814\|Ga0307302_10424596	Not Available	658	Open in IMG/M
3300028824\|Ga0307310_10260402	Not Available	835	Open in IMG/M
3300028828\|Ga0307312_10143154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1512	Open in IMG/M
3300028828\|Ga0307312_10249886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1147	Open in IMG/M
3300028828\|Ga0307312_10617675	Not Available	717	Open in IMG/M
3300028828\|Ga0307312_11140711	Not Available	515	Open in IMG/M
3300028875\|Ga0307289_10365870	Not Available	593	Open in IMG/M
3300028881\|Ga0307277_10038487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1925	Open in IMG/M
3300028884\|Ga0307308_10216728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	917	Open in IMG/M
3300028885\|Ga0307304_10311261	Not Available	697	Open in IMG/M
3300028885\|Ga0307304_10367260	Not Available	645	Open in IMG/M
3300028885\|Ga0307304_10489795	Not Available	563	Open in IMG/M
3300030785\|Ga0102757_10070387	Not Available	543	Open in IMG/M
3300031199\|Ga0307495_10040456	Not Available	909	Open in IMG/M
3300031226\|Ga0307497_10067918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1304	Open in IMG/M
3300031421\|Ga0308194_10166830	Not Available	690	Open in IMG/M
3300032180\|Ga0307471_101523714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	826	Open in IMG/M
3300034644\|Ga0370548_135384	Not Available	524	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	94.81%
Host-Associated	Host-Associated	5.19%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.74%
Aquatic	Environmental → Aquatic	14.07%
Plants	Host-Associated → Plants	5.19%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.74%
Sediment	Environmental → Aquatic → Sediment	10.37%
Freshwater	Environmental → Aquatic → Freshwater	3.70%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.22%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.96%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.30%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.37%
Loam	Environmental → Terrestrial → Soil → Loam	4.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.22%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.96%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.96%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.74%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	55.56%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.37%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	8.89%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.44%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.22%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.96%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.96%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.48%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.48%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.74%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	36.30%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.56%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	9.63%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	8.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.19%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.70%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.70%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.96%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.48%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.48%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.48%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.74%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.74%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.74%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.74%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.74%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.74%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.74%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001361	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illumina	Environmental	Open in IMG/M
3300001536	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A15-65cm-8A)- 1 week illumina	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010128	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011971	Permafrost microbial communities from Nunavut, Canada - A7_80cm_12M	Environmental	Open in IMG/M
3300011991	Permafrost microbial communities from Nunavut, Canada - A34_65cm_12M	Environmental	Open in IMG/M
3300011992	Permafrost microbial communities from Nunavut, Canada - A23_65cm_12M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013501	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0.25M	Environmental	Open in IMG/M
3300013763	Permafrost microbial communities from Nunavut, Canada - A15_65cm_0M	Environmental	Open in IMG/M
3300013768	Permafrost microbial communities from Nunavut, Canada - A35_65cm_0M	Environmental	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300018000	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_coex	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028714	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030785	Forest soil microbial communities from USA, for metatranscriptomics studies - Jemez Pines PI 5C (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034644	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1081791841	3300000956	Soil	MTYRSLAQDERGYELLRAALTGVDDSRPPAFRRLEQAVGGELARMLVGALAARRGGREIVLVYCP*
A30PFW6_12669903	3300001361	Permafrost	SPPQGERGYELLRAALNEVDDSRPPAFRRLEQAVGGELARMLVGALRPRRPRAIPV*
A1565W1_123144042	3300001536	Permafrost	MTHRSLPQDERGYELLRAALTEVEDSRPPAFRRLEQAVGGELARMLVGALRPRRPRAIPV
A2065W1_101492041	3300001537	Permafrost	MLRRSLPQGERGYELLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALA
Ga0062589_1011485472	3300004156	Soil	MSRGASGADTRKTMLQRSLPQGERGYELLLAALTEVEDSRRPAFSRLEQAVGGELARMLVGALAARRGGRETVLVFAP*
Ga0062592_1014677382	3300004480	Soil	MRHRSQPQGERGYELLLAALTEVEDSRPPAFRRLEQAVGGDLARMLVGALAARRGGRETVLVFAP*
Ga0066683_101866592	3300005172	Soil	MKYRSLAQDDRGYELLRAALTEVDDSRPPAFRRLEQAVGDELARMLVGALAARRGGREIVLVYCP*
Ga0066675_114471252	3300005187	Soil	SLPQGERGYELLRAALIEVDDSRPPAFRRLEQAVGGELARMLVGALRPRRPRPIPV*
Ga0070683_1005049172	3300005329	Corn Rhizosphere	MLHRSLPQGERGYELLRAVLTEVDDSRPPAFRRLEQALGGEFARMLVGALAARRGGREVVLVYAP*
Ga0068869_1005019712	3300005334	Miscanthus Rhizosphere	LSQGMLNPPARDHQQRASVDTRRAMLHRSLPQGERGYELLRAVLTEVDDSRPPAFRRLEQALGGEFARMLVGALAARRGGREVVLVYAP*
Ga0066686_104505733	3300005446	Soil	AMTHRSLPQGERGYELLRAALTEVDDSRPPAFRRLEQALGGEFARMLVGALTPRPSRAILVQA*
Ga0070706_1000092956	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MTHRSLPQGERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARMLVGALTPRRPRAIPV
Ga0070707_10000090829	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	SLPQGERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARMLVGALTPRRPRAIPV*
Ga0070699_1000897243	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MTHRSLPQGERGYELLRAALTEVDGSRPPAFRRLEQAVGGELARMLVGALTPRRPRAIPV
Ga0066697_101407691	3300005540	Soil	LSQGGRGYELLRAALTEVEDSRPPAIRRLEQALGGEFARMLVGALRPHRPRAIPV*
Ga0070704_1003600243	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	GYELLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALGARRGGRETVLVFAP*
Ga0066698_100745435	3300005558	Soil	MMHRSLPQGERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARLLVGALATAGRA*
Ga0066700_102037151	3300005559	Soil	MTYSSLPQGERRYELLRAALIEVDDSRPPAFRRLEQAVGGELARMLVGALRP
Ga0068864_1008097043	3300005618	Switchgrass Rhizosphere	GERGYELLRAVLTEVDDSRPPAFRRLEQALGGEFARMLVGALAARRGGREVVLVYAP*
Ga0070712_1005721801	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLHRSLPQGERGYELLRAVLTEVDDSRPPAFRRLEQALGGELARMLVGALAARRGGREVVLVYAP*
Ga0099793_100499742	3300007258	Vadose Zone Soil	MTYSSLPQGERGYELLRAALIEVDDSRPPAFRRLEQAVGGELARMLVGALRPRRPRPIPV
Ga0066710_1008050992	3300009012	Grasslands Soil	MMHRSLPQGERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARLLVGALATRRPRVIPV
Ga0066710_1017220772	3300009012	Grasslands Soil	MTHRSLSQGGRGYELLRAALTEVEDSRPPAFRRLEQALGGEFARMLVGALRPHRPRAIPV
Ga0099830_116984242	3300009088	Vadose Zone Soil	MKNRSLPQGKRGYDSLLAALTKVEDPRPPAFRRLEQALGGELARLLVGALATRRGGRPVLV*
Ga0066709_1010965772	3300009137	Grasslands Soil	MTHRSLSQGGRGYELLRAALTEVEDSRPPAIRRLEQALGGEFARMLVGALRPHRPRAIPV
Ga0066709_1014496501	3300009137	Grasslands Soil	ASNPKAMKHRSLPQGDRGYELLHAALTEVDDSRPPAFRRLEQALGGEFARMLVGALTPRPSRAILV*
Ga0105242_103137113	3300009176	Miscanthus Rhizosphere	MLHRSQPQGERGYELLLAALTEVEGSRPPAFRRLEQAVGGDLARMLVGALAARRGGRETVLVFAP*
Ga0105242_104332602	3300009176	Miscanthus Rhizosphere	MLHRSLPQGERGYELLRAVLTEVDDSRPPAFRRLEQAVGGEFARMLVGALAARRGGREVVLVYAP*
Ga0126309_101384064	3300010039	Serpentine Soil	MPHSSLPQGERGYELLLEHCAALTRTAVPRLPAFVRLEQQVGNELARMLVGALIPRRVQRAVTV*
Ga0127486_10758101	3300010128	Grasslands Soil	SLPQGERGYELLRAALTEVDDSRPPAFRRLEQALGGELARMLVGALLPRRPRALPVWL*
Ga0126319_13577262	3300010147	Soil	MPHRSLPQGERGYELLRVVLTEVDDSRPPAFRRLEQALGGEFARMLVGALAARRGGREAVLVYAP*
Ga0134071_103949861	3300010336	Grasslands Soil	MTYSSLPQGERGYELLRAALIEVDDSRPPAFRRLEQAVGGELARLLVGALATRRPRVIPV
Ga0137393_110762682	3300011271	Vadose Zone Soil	MKNRSLPQGKRGYDSLLAALTKVEDPRPPAFRRLEQALGGDLARLLVGALATRRGGRPVLV*
Ga0120175_10343672	3300011971	Permafrost	RGERGYELLRAALTEVDDYRPPAFRRLEQVVGGELARLLVGALASRRPRAIPV*
Ga0120153_10060665	3300011991	Permafrost	MKHRSLPQGERGYELLRAALTEVDDSRPPAFRRLEQVVGGELARLLVGALASRRPRAIPV
Ga0120146_10024864	3300011992	Permafrost	MKHRSLPQGERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARLLVGALASRRPRATVLV*
Ga0120159_10205153	3300012014	Permafrost	MLQRSLPQGERGYELLLAALTEVDDSRPPAFRRLEQAVGGELARMLVGALAARRGGRETVLVFCP*
Ga0137364_100625331	3300012198	Vadose Zone Soil	SSLPQGERGYELLRAALIEVEDTRPPAFRRLEQAVGGELARMLVGALTPRRPRAIPVWA*
Ga0137365_100540463	3300012201	Vadose Zone Soil	MTDSSLPQGERGYELLRAALIEVDDSRPPAFRRLEQAVGGELARMLVGALRPRRPRAIPV
Ga0137399_100522561	3300012203	Vadose Zone Soil	SLPQGERGYILLRAALTEVDDFRPPAFRRLEQAVGGELARMLVGALRPRRPRPIPV*
Ga0137374_100008786	3300012204	Vadose Zone Soil	MTYRSLPQDERGYELLRAALTEGDDARPPAFRRLEQAVGGELARMLVGALAARRGGREIVLVYCP*
Ga0137381_101174993	3300012207	Vadose Zone Soil	MMHRSLPQGERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARLLIGALATRRPRAIPV
Ga0137376_107199782	3300012208	Vadose Zone Soil	MLHRSLPQGEKGYELLLAALTEVDDPRPPAFRRLEQAVGGELARMLVGALAVRRGGRELVLVYCP*
Ga0137387_102831643	3300012349	Vadose Zone Soil	MMHRSLPQGERGYELLRAALTEADDSRPPAFRRLEQAVGGELARLLVGALATRRPRAIPV
Ga0137386_103626742	3300012351	Vadose Zone Soil	MKHRSLPQGERGYELLRAVLTEVDDSRPPAFRRLEQAVGGELARLLIGALATRRPRAIPV
Ga0137375_1000158630	3300012360	Vadose Zone Soil	MSRRPSAADTRKAMTYRSLPQDERGYELLRAALTEGDDARPPAFRRLEQAVGGELARMLVGALAARRGGREIVLVYCP*
Ga0137373_103761483	3300012532	Vadose Zone Soil	GADTWKAMMHRSLPQGERGYELLRAALTEADDSRPPAFRRLEQAVGGELARMLVGALAARRGGREIVLVSCP*
Ga0137397_100978702	3300012685	Vadose Zone Soil	VKYHSLAQDERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARMLVGALAARRGGREIVLVYCP*
Ga0157296_101479281	3300012905	Soil	MSRGLSAVDTWKAMRHRSQPQGERGYELLLAALTEVEDSRPPAFRRLEQAVGGDLARMLVGALAARRGGRETVLVFAP*
Ga0157283_100042743	3300012907	Soil	MSRGRSAVDTWKAMLHRSQPQGERGYELLLAALTEVEDSRPPAFRRLEQAVGGDLARMLVGALAARRGGRETVLVFAP*
Ga0137394_102451762	3300012922	Vadose Zone Soil	MKYHSLAQDERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARMLVGALAARRGGREIVLVYCP*
Ga0137404_111182421	3300012929	Vadose Zone Soil	MTHRSLPQGERGYELIRAALTEVEDSRPPAFRRLEQAVGGELARMLVGALRPRRPRAIPI
Ga0137410_108017353	3300012944	Vadose Zone Soil	KHRSLPQGERGYELLRAALTEVDDSRPPAFHRLEQAVGGELARMLVGALRPRRPRATVLLV*
Ga0164300_110719092	3300012951	Soil	MRLNPPARDHQKRESADTRRAMLHRSLPQGERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARMLVGALAARRGGREVVLVYAP*
Ga0164299_101752133	3300012958	Soil	MLHRSLPQGERGYELLRAVLTEVDDSRPPAFRRLEQALGGELARMLVGALAARQGGREVVLVYAP*
Ga0164299_106836142	3300012958	Soil	MSRGLSAVDTWKAMLHRSQPQGERGYELLLAALTEVEDSRPPAFRRLEQAVGGDLARMLVGALAARRGGRETVLVFAP*
Ga0164301_101665253	3300012960	Soil	MLHCSLPQGERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARMLVGALAARRGGREVVLVYAP*
Ga0164301_104828503	3300012960	Soil	AMLHRSQPQGERGYELLLAALTEVEDSRPPAFRRLEQAVGGDLARMLVGALAARRGGRETVLVFAP*
Ga0164302_102248511	3300012961	Soil	MSRGLSAVDTWKAMLHRSQPQGERGYELLLAALTEVEDSRPPAFRRLEQAVGGDLARMLVGALAARRGGRETVLVFAPEDSSLSP*
Ga0164308_101394482	3300012985	Soil	MLHRSLPQSERGYELLRAVLTEVDDSRPPAFRRLEQALGGELARMLVGALAARQGGRELVLVYAP*
Ga0164304_104909402	3300012986	Soil	MLHRSLPQGERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARMLVGALAARRGGREVVLVYAP*
Ga0164305_103581361	3300012989	Soil	MKYRSLPQGERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARLLVGALATRRPRATPVLAL*
Ga0164305_112406502	3300012989	Soil	MSRGLSAVDTWKAMLHRSQPQGERGYELLLAALTEVEGSRPPAFRRLEQAVGGDLARMLVGALAARRGGRETVLVFAP*
Ga0164305_112656681	3300012989	Soil	MLHRSLPQGERGYELLRAVLTEVDDSRPPAFRRLEQAVGGELARMLVGALAARRGGREVVLVYAP*
Ga0157375_117399292	3300013308	Miscanthus Rhizosphere	QGERGYELLLAALTEVEGSRPPAFRRLEQAVGGDLAHMLVGALAARRGGRETVLVFAP*
Ga0120154_10287714	3300013501	Permafrost	RSLPQGERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARLLVGALASRRPRATVLV*
Ga0120179_10119635	3300013763	Permafrost	GERGYELLRAALTEVDDSRPPAFRRLEQVVGGELARLLVGALASRRPRAIPV*
Ga0120155_10034767	3300013768	Permafrost	MLRRSLPQGERGYELLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGRETVLVFGP*
Ga0120155_11416532	3300013768	Permafrost	MTHGSLPQRERGYELLRAALTEVDDPRPPAFRRLEQAVGGELARMLVGALRPRRPRAIPV
Ga0120158_101397354	3300013772	Permafrost	GYELLRAALTEVDDSRPPAFRRLEQAVGGELARLLVGALASRRPRATVLV*
Ga0137418_101688114	3300015241	Vadose Zone Soil	MTYCSLPQGERGYELLRAVLTEVDDSRPPAFRRLEQAVGGELARMLVGALRPRRPRALPV
Ga0134069_13679741	3300017654	Grasslands Soil	MKYRSLAQDDRGYELLRAALTEVDDSRPPAFRRLEQAVGDELARMLVGALAARRGGREIVLVYCP
Ga0134069_13731422	3300017654	Grasslands Soil	MTHRSLPQGERGYELLRAALTEVDDSRPPAFRRLEQALGGELARMLVGALLPRRPRALPVWL
Ga0184604_100147823	3300018000	Groundwater Sediment	MLDRSLPQGERGYVLLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGREPVLVFAP
Ga0184605_100120944	3300018027	Groundwater Sediment	MLHRSLPQGERGYVLLLAALTEVEGSRPPAFRRLEQAVGGELARMLVGALAARRGGREIVLVYCP
Ga0184605_103924121	3300018027	Groundwater Sediment	MTHPSLPQGDRGYELLRVALTEVDDSRPPAFRRLEQVVGGDLARMLVGALSPRRP
Ga0184608_103181131	3300018028	Groundwater Sediment	MSGRPPGADTWKAMLHRSLPQGERGYELLRTALTEADDSRPPAFRRLEQAVGGELARMLVGALAVRRGGRELALVYGS
Ga0184620_102076212	3300018051	Groundwater Sediment	MSRWAHGADNGKAMTHHSLPQGERGNELLRAVLTEVDDFRPPAFRRLEQAVGGELARMLVGALAARRGGRESVLVFAP
Ga0184621_103600612	3300018054	Groundwater Sediment	MLHRSLPQGERGYELLRTALTEADDSRPPAFRRLEQAVGGELARMLVGALAVRRGGRELALVYGS
Ga0184619_100519663	3300018061	Groundwater Sediment	MTHPSLPQGDRGYELLRVALTEVDDARPPAFRRLEQVVGGDLARMLVGALAPRRPRAIPV
Ga0184619_102357551	3300018061	Groundwater Sediment	MIHRSLPQGKRGYELLRAALTEVDDCRPPAFRRLEQAVGGELARLLVGALAT
Ga0184617_10391371	3300018066	Groundwater Sediment	MLQRLLPQGERGYVLLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGREPVLVFAP
Ga0184618_100769841	3300018071	Groundwater Sediment	GKPMTHHSLPQGERGNELLRAVLTEVDDFRPPDFRRLAQAVGGELARMLVGALRPRRPRAIPV
Ga0184618_101197742	3300018071	Groundwater Sediment	MSGGPSGADTWKAMLHRSLPQGERGYVLLLAALTEVEGSRPPAFRRLEQAVGGELARMLVGALAARRGGREIVLVYCP
Ga0184618_103546582	3300018071	Groundwater Sediment	MSRGPAEADTRKAMKYRSLAQDDRGYELLRVALSEVDDSRPPAFRRLEQAVGGELARMLVGALAARRGVRGIVLVYCP
Ga0184618_105098631	3300018071	Groundwater Sediment	ELLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGREPVLVFAP
Ga0066655_105921891	3300018431	Grasslands Soil	LPEDERGYELLRAVLIEVDDSRPPAFRRLEQAVGGELARMLVGALRPRPPRAIPVW
Ga0193722_10366211	3300019877	Soil	HGRSGADTWKVMLHRSQPQGERGYELLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGRESVLVFAP
Ga0193730_10564221	3300020002	Soil	SGADTWKAMLQRSLSHGERGYELLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGRRESVLVFAP
Ga0193733_11408013	3300020022	Soil	LLAALTEAEGSRPPAFRRLEQAVGGELARMLVGALAARRGGRESVLVFAP
Ga0210382_100033264	3300021080	Groundwater Sediment	MTYRSLPQDERGYELLRAVLTEVEDSRPPAFRRLEQAVGGELARMLVGALRPRRPRAIPV
Ga0210382_100401013	3300021080	Groundwater Sediment	MSRGLSGADTWKTMLHRSPPQGERGYELLLAALTEVEGSRPPAFRRLEQAVGGELARMLVGALAARRGGREIVFVYCP
Ga0210382_101704391	3300021080	Groundwater Sediment	HRSLQQGERGYELLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGRGTVLVFGP
Ga0210382_105624471	3300021080	Groundwater Sediment	GGPSGADTWKAMLHRSLPQGERGYVLLLAALTEVEGSRPPAFRRLEQAVGGELARMLVGALAARRGGREIVLVYCP
Ga0193719_100685893	3300021344	Soil	MIHRSLPQGERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARMLVGALAARRGGRENVLVYCP
Ga0193719_100982701	3300021344	Soil	SGADTRKTMLQRSLPQGERGYVLLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGREPVLVFAP
Ga0222622_112775592	3300022756	Groundwater Sediment	MLQRSLPQGERGYELLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGREPVLVFAP
Ga0207689_101856882	3300025942	Miscanthus Rhizosphere	MLHRSLPQGERGYELLRAVLTEVDDSRPPAFRRLEQALGGEFARMLVGALAARRGGREVVLVYAP
Ga0207676_105685303	3300026095	Switchgrass Rhizosphere	GPGGGLSQGMLNPPARDHQQRASVDTRRAMLHRSLPQGERGYELLRAVLTEVDDSRPPAFRRLEQALGGEFARMLVGALAARRGGREVVLVYAP
Ga0209590_100178595	3300027882	Vadose Zone Soil	MKHRSLPQGERGYELLRAVLTEVDDSRPPAFRRLEQAVGGELARLLVGALATRRPRAIPV
Ga0209590_106975711	3300027882	Vadose Zone Soil	MTHDSLPQGEKGYELLRAALTEVDDSRPPAFRRLEQAVGGELARMLVGALRPRRPRPIPV
Ga0137415_100177898	3300028536	Vadose Zone Soil	MTYSSLPQGERGYELLRAALIEVDDSRPPAFRRLEQAVGGELARMLVGALRPRRPRSIPV
Ga0307293_100335293	3300028711	Soil	ALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGRGTVLVFAP
Ga0307293_101705861	3300028711	Soil	MLQRSLPQGERGYVLLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGRESI
Ga0307309_101469271	3300028714	Soil	ALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGRESVLVFAP
Ga0307301_101141672	3300028719	Soil	MLQRSLPQGERGYVLLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGRESVLVFAP
Ga0307317_103485492	3300028720	Soil	QGERGYVLLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGREPVLVFAP
Ga0307315_100705682	3300028721	Soil	MLHRSQPQGGRGYELLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGREAVLVFAP
Ga0307319_100776833	3300028722	Soil	MLQRSLPQGERGYVLLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGREPV
Ga0307319_102098352	3300028722	Soil	MKYRALAQDDRGYELLRAALTEVDDSRPPAFRRLEQAVGGELARMLVGALAARRGVRGIVLVYCP
Ga0307318_102203301	3300028744	Soil	MGAGRSGADIWKAMLRSSLPQGERGYELLLATLTEVDSRPPAFRRLEQAVGGELARMLVGALAARRGGRETVLVFAP
Ga0307280_103228431	3300028768	Soil	RRLSGADTSKAMLHRSQPQGGRGYELLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGRRESVLVFAP
Ga0307282_105287341	3300028784	Soil	LGYELLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGRGTVLVFAP
Ga0307282_106456582	3300028784	Soil	MKYRSLAQDDRGYELLRVALSEVDDSRPPAFRRLEQAVGGELARMLVGALAARRGVRGIVLVYCP
Ga0307290_103268712	3300028791	Soil	MLQRSLSHGERGYELLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGRESVLVFAP
Ga0307305_100166883	3300028807	Soil	MKYRSLAQDDRGYELLRAALTQVDDSRPPAFRRLEQAVGGELARMLVGALAARRGGREIVLVYCP
Ga0307302_103981451	3300028814	Soil	MKYRSLAQDERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARMLVGALAERRGGREIVLVYCP
Ga0307302_104245962	3300028814	Soil	MLQRSLPQGERGYVLLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGREPVLVFAP
Ga0307310_102604022	3300028824	Soil	MLHRSLPQGERGYELLRTALTEADDSRPPAFRRLEQAVGGDLARMLVGALAVRRGGRELALVYGS
Ga0307312_101431542	3300028828	Soil	MKYRSLAQDDRGYELLRAALTEVDDSRPPAFRRLEQAVGGELARMLVGALAARRGGREIVLVYCP
Ga0307312_102498862	3300028828	Soil	MIHRSLPQGERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARLLVGALATRRPRAIPV
Ga0307312_106176751	3300028828	Soil	MSGRPPGADTWKAMVHRSLPQGERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARMLVGALAARRGGRETILVYCP
Ga0307312_111407112	3300028828	Soil	RGYELLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGRGTVLVFAP
Ga0307289_103658701	3300028875	Soil	LAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGRESVLVFAP
Ga0307277_100384873	3300028881	Soil	MIHRSLPQGERGYELLRAALTEVDDCRPPAFRRLEQAVGGELARLLVGALATRRPRAIPV
Ga0307308_102167282	3300028884	Soil	MKYRSPAQDDRGYELLRAALTEVDDSRPPAFRRLEQAVGGELARMLVGALAARRGGREIVLVYCP
Ga0307304_103112613	3300028885	Soil	SRRRSRADTWKAMLHRSLPQGERGYELLRTALTEADDSRPPAFRRLEQAVGGDLARMLVGALAVRRGGRELALVYGS
Ga0307304_103672602	3300028885	Soil	QGGRGYELLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGGGTVLVFAR
Ga0307304_104897952	3300028885	Soil	MKYRSLAQDDRGYELLRVALSEVDDSRPPAFRRLEQAVGGELARMLVGALAARRGGREIVLVYCP
Ga0102757_100703872	3300030785	Soil	MSRGLSAVDTWKAMLHRSQPQGERGYELLLAALTEVEYSRPPAFRRLEQAVGGELARMLVGALGARRGGREAVLVFAP
Ga0307495_100404562	3300031199	Soil	MSRGVSAVDTGKAMLHRSQPQGERGYELLLAALTEVEGSRPPAFRRLEQAVGGDLARMLVGALAARRGGRETVLVFAP
Ga0307497_100679183	3300031226	Soil	MLHRSLPQGERGYELLRAVLTEVDDSRPPAFRRLEQALGGELARMLVGALAARRGGREVVLVYAA
Ga0308194_101668301	3300031421	Soil	RSLAQDDRGYELLRAALTEVDDSRPPAFRRLEQAVGGELARMLVGALAARRGVRGIVLVYCP
Ga0307471_1015237141	3300032180	Hardwood Forest Soil	LPQGERGYELLRAALTEVDDSRPPAFRRLEQAVGGELARMLVGALTPRRPRAIPV
Ga0370548_135384_308_523	3300034644	Soil	ADTWKAMLHRSQLQGGRGYELLLAALTEVEDSRPPAFRRLEQAVGGELARMLVGALAARRGGRGTVLVFAP

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F058547

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences